Psyllid ID: psy4166

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISIN
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccHHcccHHHHcccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEEEEccccc
Coil and Loop (DISEMBL)
msmkydakadLYSVGTIVFQcltgkapfiansppqlkqyyeknlvlvpkvpvgtsAELKELLLGLLKRNamdrisfeqlfahpflqplaphplipephagspvtlspedstddfvvipnsadvvstspprpsslllspapsqHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLyfhdftpwSFVILYTISIN
Flexible Loop (DISEMBL)
msmkydakADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISIN
Low Complexity Region (SEG)
MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAelkelllgllkRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSADVVSTspprpsslllspapsQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISIN
Disordered region (IsUnstruct)
*******KADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP******************************************************AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTIS**
Disordered Region (DISOPRED)
****YDA*ADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSADVVSTSPPRPSSLLLS******************************KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTI***
Disordered Region (DISEMBL)
********ADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSAD*************LSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISIN
Disordered Region (DISPRO)
***KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP*******************************************LSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISIN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISIN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
Q23023	856	Serine/threonine-protein	yes	N/A	0.369	0.107	0.677	2e-24
Q8IYT8	1036	Serine/threonine-protein	yes	N/A	0.317	0.076	0.647	4e-21
Q9QY01	1037	Serine/threonine-protein	yes	N/A	0.317	0.076	0.647	4e-21
O70405	1051	Serine/threonine-protein	no	N/A	0.345	0.081	0.6	6e-20
O75385	1050	Serine/threonine-protein	no	N/A	0.309	0.073	0.641	7e-20
Q52EB3	982	Serine/threonine-protein	N/A	N/A	0.457	0.116	0.370	6e-13
A2QIL5	1007	Serine/threonine-protein	yes	N/A	0.510	0.126	0.348	5e-12
Q7RX99	932	Serine/threonine-protein	N/A	N/A	0.325	0.086	0.440	1e-11
Q6H9I1	952	Serine/threonine-protein	N/A	N/A	0.325	0.085	0.428	3e-11
A6RYB8	952	Serine/threonine-protein	N/A	N/A	0.325	0.085	0.428	3e-11

>sp|Q23023|UNC51_CAEEL Serine/threonine-protein kinase unc-51 OS=Caenorhabditis elegans GN=unc-51 PE=1 SV=1

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/93 (67%), Positives = 72/93 (77%), Gaps = 1/93 (1%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MSM+YDAKADL+S+GTI+FQCLTGKAPF+A +PPQLK YYEK   L P +P   S  L++
Sbjct: 191 MSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRD 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFL-QPLAPHP 92
           LLL LLKRNA DRISFE  F HPFL  PL P P
Sbjct: 251 LLLRLLKRNAKDRISFEDFFNHPFLTSPLLPSP 283

Protein kinase important for axonal elongation and axonal guidance. Functions in the CAN axons to direct both anterior and posterior migrations. Phosphorylates both unc-14 and vab-8.
Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8IYT8|ULK2_HUMAN Serine/threonine-protein kinase ULK2 OS=Homo sapiens GN=ULK2 PE=1 SV=3

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 6/85 (7%)

Query: 144 VAIKRITKKNLAKTQNF-GKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK I KKNL+K+Q   GKEI ILKEL    HEN+V L   +E    V+LVME+CNGGD
Sbjct: 36  VAIKSINKKNLSKSQILLGKEIKILKEL---QHENIVALYDVQELPNSVFLVMEYCNGGD 92

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQM 227
           LADYL +KGTLSEDTIR+F  LHQ+
Sbjct: 93  LADYLQAKGTLSEDTIRVF--LHQI 115

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652, FRS2, FRS3 and RPTOR; however such data need additional evidences. Not involved in ammonia-induced autophagy or in autophagic response of cerebellar granule neurons (CGN) to low potassium concentration. Plays a role early in neuronal differentiation and is required for granule cell axon formation: may govern axon formation via Ras-like GTPase signaling and through regulation of the Rab5-mediated endocytic pathways within developing axons.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9QY01|ULK2_MOUSE Serine/threonine-protein kinase ULK2 OS=Mus musculus GN=Ulk2 PE=1 SV=1

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 6/85 (7%)

Query: 144 VAIKRITKKNLAKTQNF-GKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK I KKNL+K+Q   GKEI ILKEL    HEN+V L   +E    V+LVME+CNGGD
Sbjct: 36  VAIKSINKKNLSKSQILLGKEIKILKEL---QHENIVALYDVQELPNSVFLVMEYCNGGD 92

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQM 227
           LADYL +KGTLSEDTIR+F  LHQ+
Sbjct: 93  LADYLQAKGTLSEDTIRVF--LHQI 115

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652, FRS2, FRS3 and RPTOR; however such data need additional evidences. Not involved in ammonia-induced autophagy or in autophagic response of cerebellar granule neurons (CGN) to low potassium concentration. Plays a role early in neuronal differentiation and is required for granule cell axon formation: may govern axon formation via Ras-like GTPase signaling and through regulation of the Rab5-mediated endocytic pathways within developing axons.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O70405|ULK1_MOUSE Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1 SV=1

 Score = 97.8 bits (242), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/90 (60%), Positives = 67/90 (74%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS  YD KADL+S+GTIV+QCLTGKAPF A+SP  L+ +YEKN  LVP +P  TSA L++
Sbjct: 194 MSQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPAIPRETSAPLRQ 253

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAP 90
           LLL LL+RN  DR+ F++ F HPFL    P
Sbjct: 254 LLLALLQRNHKDRMDFDEFFHHPFLDASTP 283

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652 and RPTOR; however such data need additional evidences. Plays a role early in neuronal differentiation and is required for granule cell axon formation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Homo sapiens GN=ULK1 PE=1 SV=2

 Score = 97.4 bits (241), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 60/81 (74%), Gaps = 4/81 (4%)

Query: 144 VAIKRITKKNLAKTQNF-GKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VA+K I KKNLAK+Q   GKEI ILKEL    HEN+V L   +E    VYLVME+CNGGD
Sbjct: 43  VAVKCINKKNLAKSQTLLGKEIKILKELK---HENIVALYDFQEMANSVYLVMEYCNGGD 99

Query: 203 LADYLVSKGTLSEDTIRIFLK 223
           LADYL +  TLSEDTIR+FL+
Sbjct: 100 LADYLHAMRTLSEDTIRLFLQ 120

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652 and RPTOR; however such data need additional evidences. Plays a role early in neuronal differentiation and is required for granule cell axon formation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q52EB3|ATG1_MAGO7 Serine/threonine-protein kinase ATG1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ATG1 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 10/124 (8%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYE--KNLVLVPKVPVGTSAELKEL 61
           +YDAKADL+SVGT++F+ + G+ PF A++  +L +  E  ++++  P+     S+E+K L
Sbjct: 242 RYDAKADLWSVGTVLFEMIVGRPPFRASNHVELLRKIEAAEDVIKFPR-ETTISSEMKGL 300

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL---IPEPHAGSPVTLSPE----DSTDDF 114
              LLKRN ++RISFE  FAHP +    P  +   IP+P A    + S +      +DD 
Sbjct: 301 TRALLKRNPVERISFENFFAHPVIISSIPGLVEDDIPKPEASEQRSSSKDTRAASKSDDP 360

Query: 115 VVIP 118
           +  P
Sbjct: 361 IASP 364

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes. Autophagy is essential to fungal development, production of appressorium turgor, and pathogenicity in rice blast disease.

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2QIL5|ATG1_ASPNC Serine/threonine-protein kinase atg1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg1 PE=3 SV=1

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 28/155 (18%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN---LVLVPKVPVGTSAELKE 60
           KYDAKADL+SVGT++++ + G+APF A +  +L +  E+N   +    K  V  S +++E
Sbjct: 254 KYDAKADLWSVGTVLYEMVVGRAPFRAVNHIELIKKIEQNKDQISFPSKNRV--SEDIRE 311

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFL-----------QPLAPHPLIPEPHAGS------PV 103
           L+ GLLK++ MDR++F+  FAH  L            PL   P  P P  GS      PV
Sbjct: 312 LIRGLLKQHPMDRMNFDVYFAHKVLTEPIPGLVADDAPLGRSPADPTPRPGSGSRRSTPV 371

Query: 104 TLSPEDS-----TDDFVVIPNSADVVSTSPPRPSS 133
            +  E++      D+    P +A    T  PRP +
Sbjct: 372 QMKRENALSGGVRDEPATYP-AAQRAMTQSPRPET 405

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7RX99|ATG1_NEUCR Serine/threonine-protein kinase atg-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg-1 PE=3 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 3/84 (3%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK--NLVLVPKVPVGTSAELKEL 61
           KYDAKADL+SVGT++++ +TG+ PF A++  +L +  E   +++   +  V  S E+K L
Sbjct: 247 KYDAKADLWSVGTVLYEMVTGRPPFKASNHVELLRKIESSGDVIKFTRESV-VSQEMKGL 305

Query: 62  LLGLLKRNAMDRISFEQLFAHPFL 85
           +  LLK+N ++RISFE LF HP +
Sbjct: 306 IRALLKKNPVERISFEDLFNHPVV 329

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6H9I1|ATG1_BOTFU Serine/threonine-protein kinase ATG1 OS=Botryotinia fuckeliana GN=atg1 PE=3 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 3/84 (3%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL--VLVPKVPVGTSAELKEL 61
           KYDA+ADL+S+GT++++ +TG+ PF A +  QL Q  EKN   +  P   +  S +LK++
Sbjct: 247 KYDARADLWSIGTVLYEMMTGRPPFKAINHVQLLQKIEKNQDEIRFPSRGI-YSRDLKDI 305

Query: 62  LLGLLKRNAMDRISFEQLFAHPFL 85
           +  LLK+   DRI+F + FAHP +
Sbjct: 306 VRRLLKKKPEDRITFPEYFAHPVV 329

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Botryotinia fuckeliana (taxid: 40559)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A6RYB8|ATG1_BOTFB Serine/threonine-protein kinase atg1 OS=Botryotinia fuckeliana (strain B05.10) GN=atg1 PE=3 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 3/84 (3%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL--VLVPKVPVGTSAELKEL 61
           KYDA+ADL+S+GT++++ +TG+ PF A +  QL Q  EKN   +  P   +  S +LK++
Sbjct: 247 KYDARADLWSIGTVLYEMMTGRPPFKAINHVQLLQKIEKNQDEIRFPSRGI-YSRDLKDI 305

Query: 62  LLGLLKRNAMDRISFEQLFAHPFL 85
           +  LLK+   DRI+F + FAHP +
Sbjct: 306 VRRLLKKKPEDRITFPEYFAHPVV 329

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Botryotinia fuckeliana (strain B05.10) (taxid: 332648)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
328721480	663	PREDICTED: serine/threonine-protein kina	0.534	0.200	0.523	2e-32
242010598	695	serine/threonine-protein kinase ULK2, pu	0.614	0.220	0.464	6e-31
170030128	686	conserved hypothetical protein [Culex qu	0.594	0.215	0.447	8e-31
66560999	752	PREDICTED: serine/threonine-protein kina	0.574	0.190	0.448	3e-30
380030403	752	PREDICTED: serine/threonine-protein kina	0.570	0.188	0.451	4e-30
345480210	772	PREDICTED: serine/threonine-protein kina	0.574	0.185	0.437	4e-30
156544369	765	PREDICTED: serine/threonine-protein kina	0.574	0.186	0.437	5e-30
340712126	753	PREDICTED: serine/threonine-protein kina	0.570	0.188	0.464	6e-30
350398945	753	PREDICTED: serine/threonine-protein kina	0.558	0.184	0.457	1e-29
383857154	753	PREDICTED: serine/threonine-protein kina	0.574	0.189	0.456	2e-29

>gi|328721480|ref|XP_001944514.2| PREDICTED: serine/threonine-protein kinase unc-51-like [Acyrthosiphon pisum]

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 18/151 (11%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTI+FQCL GKAPF ANSP  LKQ YEK   L+PK+P GTS++L  
Sbjct: 191 MSLQYDAKADLWSLGTIIFQCLAGKAPFFANSPAGLKQIYEKTSNLMPKIPPGTSSDLSN 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVT-----------LSPED 109
           LL GLLKRN  DRISFE  F H FL+   P   +P P A SP T           +SP D
Sbjct: 251 LLFGLLKRNPKDRISFETFFDHTFLKMKPPPVTMPSPLANSPKTPSVFDQGYQYSVSP-D 309

Query: 110 STDDFVVIPNSADV------VSTSPPRPSSL 134
            +D++V++P++         +S SPPRPS+L
Sbjct: 310 LSDEYVIVPSNIPAYHHEKDISASPPRPSTL 340

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010598|ref|XP_002426052.1| serine/threonine-protein kinase ULK2, putative [Pediculus humanus corporis] gi|212510062|gb|EEB13314.1| serine/threonine-protein kinase ULK2, putative [Pediculus humanus corporis]

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/183 (46%), Positives = 110/183 (60%), Gaps = 30/183 (16%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTG APF A +P  LKQ+YEKN  L PK+P GTS EL  
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGIAPFQAQTPQALKQFYEKNSNLAPKIPNGTSPELVS 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVT----------LSPEDS 110
           LL GLL+RNA DR+SF+  F HPFL+P +P    P     SPVT              + 
Sbjct: 251 LLNGLLRRNAKDRMSFDVFFNHPFLRPPSPVNNKPVELGVSPVTPRPSSPPASSCESPEE 310

Query: 111 TDDFVVIP------NSADVVSTSPPRPSSLLLS-------PAPSQHV-------AIKRIT 150
           TDDFV++P      +     + SPPRPS L +        P+PS++V       ++KR +
Sbjct: 311 TDDFVLVPANLPFEDKGMSSAASPPRPSFLPVDATEPIPVPSPSKNVVPRSQPISMKRKS 370

Query: 151 KKN 153
            +N
Sbjct: 371 SQN 373

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170030128|ref|XP_001842942.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167865948|gb|EDS29331.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 106/181 (58%), Gaps = 33/181 (18%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A +P +LK +YEKN  L PK+P GTS E+ +
Sbjct: 135 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAQTPQELKMFYEKNANLAPKIPPGTSKEMTD 194

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQ-PLAPHPLIPEPHAGSPVTL--------SPEDST 111
           LL+GLL+RNA +R++FE  F H FLQ    P   +P     S  TL        S +D++
Sbjct: 195 LLMGLLRRNAKERMNFEMFFNHSFLQRQTTPQSSVPVEIDDSVATLASANNTSNSSQDNS 254

Query: 112 DDFVVIPN---------------------SADVVSTSPPRPSSLLLS---PAPSQHVAIK 147
           DDFV++P+                     +      SPPRPSSL +S   P PS    + 
Sbjct: 255 DDFVLVPSNLPIDPCSGNYDKSKPTRVPQTGSNAQASPPRPSSLPISEPKPVPSAARKLS 314

Query: 148 R 148
           R
Sbjct: 315 R 315

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66560999|ref|XP_624950.1| PREDICTED: serine/threonine-protein kinase ULK2 [Apis mellifera]

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 106/183 (57%), Gaps = 40/183 (21%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL +
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPQALKLFYEKNANLGPKIPPGTSPELSD 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL-IPEPHAGSPVTLSPEDST-------- 111
           LL+GLL+RNA DR+ F++ F HPFLQ    +P  +P     SP TL+ ++ T        
Sbjct: 251 LLMGLLRRNARDRMPFDEFFGHPFLQGSRENPSPVPAELPASPGTLTIQEGTTVIRSEPE 310

Query: 112 ---------DDFVVIPN-------------------SADVVSTSPPRPSSLLLS---PAP 140
                    DDFV++P+                    A   + SPPRP  L +S   P P
Sbjct: 311 TTSPCSSPEDDFVLVPSDLSSDTDNNPNTQQVKYIKQASREAVSPPRPCFLPISEPIPVP 370

Query: 141 SQH 143
           SQ 
Sbjct: 371 SQR 373

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030403|ref|XP_003698838.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Apis florea]

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 107/184 (58%), Gaps = 42/184 (22%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL +
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPQALKLFYEKNANLGPKIPPGTSPELSD 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPL--APHPLIPEPHAGSPVTLSPEDST------- 111
           LL+GLL+RNA DR+ F++ F HPFLQ    +P P +P     SP TL+ ++ T       
Sbjct: 251 LLMGLLRRNARDRMPFDEFFGHPFLQGSRESPSP-VPAELPASPGTLTIQEGTTAIRSEP 309

Query: 112 ----------DDFVVIPN-------------------SADVVSTSPPRPSSLLLS---PA 139
                     DDFV++P+                    A   + SPPRP  L +S   P 
Sbjct: 310 ETTSPCSSPEDDFVLVPSDLSSDTDNNPNTQQVKYIKQASREAVSPPRPCFLPISEPIPV 369

Query: 140 PSQH 143
           PSQ 
Sbjct: 370 PSQR 373

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480210|ref|XP_003424105.1| PREDICTED: serine/threonine-protein kinase ULK2-like isoform 2 [Nasonia vitripennis]

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 109/185 (58%), Gaps = 42/185 (22%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL  
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPQALKMFYEKNANLGPKIPPGTSPELSN 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQP--LAPHPL----------IPEPHAGSPVTLSPE 108
           LL+GLL+RNA DR+ F++ F+HPFLQ    +P PL          +P P + +  T S +
Sbjct: 251 LLMGLLRRNARDRMPFDEFFSHPFLQGPRQSPSPLPVELPASPGTLPAPESTACDTRSGQ 310

Query: 109 DST-------DDFVVIPN--------------------SADVVSTSPPRPSSLLLS---P 138
           ++        DDFV++P+                    S+   + SPPRP  L +S   P
Sbjct: 311 ETNSPCSSPEDDFVLVPSDLSSDTDNNPNPLQIKYTKQSSREAAASPPRPCYLPISEPIP 370

Query: 139 APSQH 143
            P+ H
Sbjct: 371 VPTTH 375

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544369|ref|XP_001607390.1| PREDICTED: serine/threonine-protein kinase ULK2-like isoform 1 [Nasonia vitripennis]

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 109/185 (58%), Gaps = 42/185 (22%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL  
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPQALKMFYEKNANLGPKIPPGTSPELSN 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQP--LAPHPL----------IPEPHAGSPVTLSPE 108
           LL+GLL+RNA DR+ F++ F+HPFLQ    +P PL          +P P + +  T S +
Sbjct: 251 LLMGLLRRNARDRMPFDEFFSHPFLQGPRQSPSPLPVELPASPGTLPAPESTACDTRSGQ 310

Query: 109 DST-------DDFVVIPN--------------------SADVVSTSPPRPSSLLLS---P 138
           ++        DDFV++P+                    S+   + SPPRP  L +S   P
Sbjct: 311 ETNSPCSSPEDDFVLVPSDLSSDTDNNPNPLQIKYTKQSSREAAASPPRPCYLPISEPIP 370

Query: 139 APSQH 143
            P+ H
Sbjct: 371 VPTTH 375

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712126|ref|XP_003394615.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Bombus terrestris]

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 110/185 (59%), Gaps = 43/185 (23%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL +
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPQALKLFYEKNANLGPKIPPGTSPELSD 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPL--APHPLIPEPHAGSPVTLS-PEDST------ 111
           LL+GLL+RNA DR+ F++ F HPFLQ    +P P +P     SP TL+ PE +T      
Sbjct: 251 LLMGLLRRNARDRMPFDEFFGHPFLQGSRESPSP-VPAELPASPGTLAIPEGATAVTRSE 309

Query: 112 -----------DDFVVIPN--SADV-----------------VSTSPPRPSSLLLS---P 138
                      DDFV++P+  S+D                   + SPPRP  L +S   P
Sbjct: 310 PETTSPCSSPEDDFVLVPSDLSSDTDNNPNTQQVKYIKQTSREAVSPPRPCFLPISEPIP 369

Query: 139 APSQH 143
            PSQ 
Sbjct: 370 VPSQR 374

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398945|ref|XP_003485359.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Bombus impatiens]

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/188 (45%), Positives = 108/188 (57%), Gaps = 49/188 (26%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL +
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPQALKLFYEKNANLGPKIPPGTSPELSD 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQ-------------PLAPHPLI----------PEP 97
           LL+GLL+RNA DR+ F++ F HPFLQ             P +P  L            EP
Sbjct: 251 LLMGLLRRNARDRMPFDEFFGHPFLQGSRESPSPVPAELPASPGTLAIQEGATAVTRSEP 310

Query: 98  HAGSPVTLSPEDSTDDFVVIPN--SADV-----------------VSTSPPRPSSLLLS- 137
              SP + SPE   DDFV++P+  S+D                   + SPPRP  L +S 
Sbjct: 311 ETTSPCS-SPE---DDFVLVPSDLSSDTDNNPNTQQVKYIKQTSREAVSPPRPCFLPISE 366

Query: 138 --PAPSQH 143
             P PSQ 
Sbjct: 367 PIPVPSQR 374

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857154|ref|XP_003704070.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Megachile rotundata]

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 107/184 (58%), Gaps = 41/184 (22%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           MS++YDAKADL+S+GTIVFQCLTGKAPF A++P  LK +YEKN  L PK+P GTS EL +
Sbjct: 191 MSLQYDAKADLWSLGTIVFQCLTGKAPFQAHTPHALKLFYEKNANLGPKIPAGTSPELSD 250

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQ-------------PLAPHPLIPEPHA-----GSP 102
           LL+GLL+RNA DR+ F++ F H FLQ             P +P  L+ +  A       P
Sbjct: 251 LLMGLLRRNARDRMPFDEFFGHAFLQGTRESPSPVPAELPASPGTLVIQERATVAARSEP 310

Query: 103 VTLSPEDS-TDDFVVIPN--SADV-----------------VSTSPPRPSSLLLS---PA 139
            T SP  S  DDFV++P+  S+D                   + SPPRP  L +S   P 
Sbjct: 311 ETTSPCSSPEDDFVLVPSDLSSDTDNNPNTQQVKYVKQTSREAVSPPRPCFLPISEPIPV 370

Query: 140 PSQH 143
           PSQ 
Sbjct: 371 PSQR 374

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
FB|FBgn0260945	855	Atg1 "Autophagy-specific gene	0.317	0.092	0.775	4.3e-25
WB|WBGene00006786	856	unc-51 [Caenorhabditis elegans	0.369	0.107	0.602	8.6e-25
UNIPROTKB|Q23023	856	unc-51 "Serine/threonine-prote	0.369	0.107	0.602	8.6e-25
UNIPROTKB|O75385	1050	ULK1 "Serine/threonine-protein	0.481	0.114	0.451	5.4e-21
ZFIN|ZDB-GENE-071203-2	1011	ulk1b "unc-51-like kinase 1b (	0.309	0.076	0.679	2.9e-20
MGI|MGI:1270126	1051	Ulk1 "unc-51 like kinase 1" [M	0.481	0.114	0.451	1.5e-20
RGD|1589743	1057	Ulk1 "Unc-51 like kinase 1 (C.	0.481	0.113	0.451	1.5e-20
UNIPROTKB|I3L6G0	145	I3L6G0 "Uncharacterized protei	0.409	0.703	0.462	4.4e-20
ZFIN|ZDB-GENE-080723-31	1038	ulk1a "unc-51-like kinase 1a (	0.445	0.106	0.435	4.7e-20
UNIPROTKB|E2RF62	1037	ULK2 "Uncharacterized protein"	0.405	0.097	0.490	5e-20

FB|FBgn0260945 Atg1 "Autophagy-specific gene 1" [Drosophila melanogaster (taxid:7227)]

 Score = 296 (109.3 bits), Expect = 4.3e-25, P = 4.3e-25
 Identities = 62/80 (77%), Positives = 65/80 (81%)

Query:   144 VAIKRITKKNLAKTQNF-GKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
             VAIK ITKK   KTQN  GKEI ILKELTELHHENVV LL CKES   V LVME+CNGGD
Sbjct:    35 VAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGD 94

Query:   203 LADYLVSKGTLSEDTIRIFL 222
             LADYL  KGTLSEDT+R+FL
Sbjct:    95 LADYLSVKGTLSEDTVRLFL 114

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IMP

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0004672 "protein kinase activity" evidence=ISS;IDA;IMP;NAS

GO:0016301 "kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0016236 "macroautophagy" evidence=IMP

GO:0006914 "autophagy" evidence=IMP

GO:0019894 "kinesin binding" evidence=IMP

GO:0032007 "negative regulation of TOR signaling cascade" evidence=IMP

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0008088 "axon cargo transport" evidence=IMP

GO:0050808 "synapse organization" evidence=IMP

GO:0050804 "regulation of synaptic transmission" evidence=IMP

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0035069 "larval midgut histolysis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IMP

GO:0010506 "regulation of autophagy" evidence=IMP

WB|WBGene00006786 unc-51 [Caenorhabditis elegans (taxid:6239)]

 Score = 280 (103.6 bits), Expect = 8.6e-25, Sum P(2) = 8.6e-25
 Identities = 56/93 (60%), Positives = 63/93 (67%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MSM+YDAKADL+S+GTI+FQCLTGKAPF+A +PPQLK YYEK   L P +P   S     
Sbjct:   191 MSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRD 250

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFL-QPLAPHP 92
                    RNA DRISFE  F HPFL  PL P P
Sbjct:   251 LLLRLLKRNAKDRISFEDFFNHPFLTSPLLPSP 283

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0048675 "axon extension" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0070265 "necrotic cell death" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IGI;IMP

GO:0040011 "locomotion" evidence=IMP

GO:0030163 "protein catabolic process" evidence=IMP

GO:0030516 "regulation of axon extension" evidence=IMP

GO:0007409 "axonogenesis" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

GO:0040024 "dauer larval development" evidence=IGI

GO:0006914 "autophagy" evidence=IGI

GO:0012501 "programmed cell death" evidence=IGI

GO:0008361 "regulation of cell size" evidence=IMP

GO:0045138 "tail tip morphogenesis" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IGI

GO:0032880 "regulation of protein localization" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0030424 "axon" evidence=IDA

GO:0043277 "apoptotic cell clearance" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q23023 unc-51 "Serine/threonine-protein kinase unc-51" [Caenorhabditis elegans (taxid:6239)]

 Score = 280 (103.6 bits), Expect = 8.6e-25, Sum P(2) = 8.6e-25
 Identities = 56/93 (60%), Positives = 63/93 (67%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MSM+YDAKADL+S+GTI+FQCLTGKAPF+A +PPQLK YYEK   L P +P   S     
Sbjct:   191 MSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRD 250

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFL-QPLAPHP 92
                    RNA DRISFE  F HPFL  PL P P
Sbjct:   251 LLLRLLKRNAKDRISFEDFFNHPFLTSPLLPSP 283

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|O75385 ULK1 "Serine/threonine-protein kinase ULK1" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
 Identities = 56/124 (45%), Positives = 71/124 (57%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MS  YD KADL+S+GTIV+QCLTGKAPF A+SP  L+ +YEKN  LVP +P  TSA    
Sbjct:   194 MSQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPTIPRETSAPLRQ 253

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFLQ--P-LAPHPLIPEP-HAGSPVTLSPEDSTDDFVV 116
                    RN  DR+ F++ F HPFL   P +   P +P P +  S    S   S+   + 
Sbjct:   254 LLLALLQRNHKDRMDFDEFFHHPFLDASPSVRKSPPVPVPSYPSSGSGSSSSSSSTSHLA 313

Query:   117 IPNS 120
              P S
Sbjct:   314 SPPS 317

GO:0005524 "ATP binding" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

GO:0007265 "Ras protein signal transduction" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0021707 "cerebellar granule cell differentiation" evidence=IEA

GO:0021933 "radial glia guided migration of cerebellar granule cell" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0031102 "neuron projection regeneration" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0048675 "axon extension" evidence=IEA

GO:0051386 "regulation of neurotrophin TRK receptor signaling pathway" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0070969 "ULK1-ATG13-FIP200 complex" evidence=IPI

GO:0008104 "protein localization" evidence=IMP

GO:0005776 "autophagic vacuole" evidence=IDA

GO:0010506 "regulation of autophagy" evidence=IDA;IMP

GO:0032403 "protein complex binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA;NAS

GO:0005737 "cytoplasm" evidence=NAS

GO:0031175 "neuron projection development" evidence=IMP

GO:0031669 "cellular response to nutrient levels" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IDA

GO:0042594 "response to starvation" evidence=ISS

GO:0010508 "positive regulation of autophagy" evidence=ISS

GO:0016239 "positive regulation of macroautophagy" evidence=IMP

GO:0017137 "Rab GTPase binding" evidence=IPI

ZFIN|ZDB-GENE-071203-2 ulk1b "unc-51-like kinase 1b (C. elegans)" [Danio rerio (taxid:7955)]

 Score = 252 (93.8 bits), Expect = 2.9e-20, P = 2.9e-20
 Identities = 55/81 (67%), Positives = 63/81 (77%)

Query:   144 VAIKRITKKNLAKTQNF-GKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
             VA+K I KKNLAK+Q   GKEI ILKEL    HEN+V L   +E+   VYLVME+CNGGD
Sbjct:    36 VAVKCINKKNLAKSQTLLGKEIKILKELK---HENIVALHDFQETASSVYLVMEYCNGGD 92

Query:   203 LADYLVSKGTLSEDTIRIFLK 223
             LADYL SKGTLSEDTIR+FL+
Sbjct:    93 LADYLHSKGTLSEDTIRVFLQ 113

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1270126 Ulk1 "unc-51 like kinase 1" [Mus musculus (taxid:10090)]

 Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
 Identities = 56/124 (45%), Positives = 71/124 (57%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MS  YD KADL+S+GTIV+QCLTGKAPF A+SP  L+ +YEKN  LVP +P  TSA    
Sbjct:   194 MSQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPAIPRETSAPLRQ 253

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFLQ---PLAPHPLIPEP-HAGSPVTLSPEDSTDDFVV 116
                    RN  DR+ F++ F HPFL    P+   P +P P +  S    S   S+   + 
Sbjct:   254 LLLALLQRNHKDRMDFDEFFHHPFLDASTPIKKSPPVPVPSYPSSGSGSSSSSSSASHLA 313

Query:   117 IPNS 120
              P S
Sbjct:   314 SPPS 317

GO:0000045 "autophagic vacuole assembly" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005776 "autophagic vacuole" evidence=ISO

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007265 "Ras protein signal transduction" evidence=IDA

GO:0007409 "axonogenesis" evidence=IDA

GO:0008104 "protein localization" evidence=ISO

GO:0010506 "regulation of autophagy" evidence=ISO;IMP

GO:0010508 "positive regulation of autophagy" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0016239 "positive regulation of macroautophagy" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=IPI

GO:0021707 "cerebellar granule cell differentiation" evidence=IMP

GO:0021933 "radial glia guided migration of cerebellar granule cell" evidence=IMP

GO:0030659 "cytoplasmic vesicle membrane" evidence=IDA

GO:0031102 "neuron projection regeneration" evidence=ISO

GO:0031175 "neuron projection development" evidence=ISO;IMP

GO:0031623 "receptor internalization" evidence=IMP

GO:0031669 "cellular response to nutrient levels" evidence=IDA

GO:0032403 "protein complex binding" evidence=ISO

GO:0034045 "pre-autophagosomal structure membrane" evidence=ISO;IDA

GO:0042594 "response to starvation" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=ISO;IDA

GO:0048671 "negative regulation of collateral sprouting" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

GO:0051386 "regulation of neurotrophin TRK receptor signaling pathway" evidence=IMP

GO:0070969 "ULK1-ATG13-FIP200 complex" evidence=ISO;IPI

RGD|1589743 Ulk1 "Unc-51 like kinase 1 (C. elegans)" [Rattus norvegicus (taxid:10116)]

 Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
 Identities = 56/124 (45%), Positives = 71/124 (57%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MS  YD KADL+S+GTIV+QCLTGKAPF A+SP  L+ +YEKN  LVP +P  TSA    
Sbjct:   194 MSQHYDGKADLWSIGTIVYQCLTGKAPFQASSPQDLRLFYEKNKTLVPAIPRETSAPLRQ 253

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFLQ---PLAPHPLIPEP-HAGSPVTLSPEDSTDDFVV 116
                    RN  DR+ F++ F HPFL    P+   P +P P +  S    S   S+   + 
Sbjct:   254 LLLALLQRNHKDRMDFDEFFHHPFLDASTPIKKSPPVPVPSYPSSGSGSSSSSSSASHLA 313

Query:   117 IPNS 120
              P S
Sbjct:   314 SPPS 317

GO:0000045 "autophagic vacuole assembly" evidence=IEA;ISO

GO:0000407 "pre-autophagosomal structure" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0005776 "autophagic vacuole" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0007265 "Ras protein signal transduction" evidence=IEA;ISO

GO:0007409 "axonogenesis" evidence=ISO

GO:0008104 "protein localization" evidence=IEA;ISO

GO:0010506 "regulation of autophagy" evidence=ISO

GO:0010508 "positive regulation of autophagy" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016239 "positive regulation of macroautophagy" evidence=IEA;ISO

GO:0017137 "Rab GTPase binding" evidence=IEA;ISO

GO:0019901 "protein kinase binding" evidence=IEA;ISO

GO:0021707 "cerebellar granule cell differentiation" evidence=IEA;ISO

GO:0021933 "radial glia guided migration of cerebellar granule cell" evidence=IEA;ISO

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA;ISO

GO:0031102 "neuron projection regeneration" evidence=IMP

GO:0031175 "neuron projection development" evidence=ISO;IMP

GO:0031623 "receptor internalization" evidence=IEA;ISO

GO:0031669 "cellular response to nutrient levels" evidence=ISO

GO:0032403 "protein complex binding" evidence=IEA;ISO

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA;ISO

GO:0042594 "response to starvation" evidence=ISO

GO:0043005 "neuron projection" evidence=IEA;ISO

GO:0043025 "neuronal cell body" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA;ISO

GO:0048675 "axon extension" evidence=IEA;ISO

GO:0051386 "regulation of neurotrophin TRK receptor signaling pathway" evidence=IEA;ISO

GO:0070969 "ULK1-ATG13-FIP200 complex" evidence=IEA;ISO

UNIPROTKB|I3L6G0 I3L6G0 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 50/108 (46%), Positives = 64/108 (59%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MS  YDAKADL+S+GT+++QCL GK PF ANSP  L+ +YEKN  L+P +P  TS     
Sbjct:    16 MSQHYDAKADLWSIGTVIYQCLVGKPPFQANSPQDLRIFYEKNRNLMPSIPRETSPYLAH 75

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFLQ--PL---APHPL-IPEPHAGSP 102
                    RN  DR+ FE  F+HPFL   P+    P P+ +P P    P
Sbjct:    76 LLLGLLQRNQKDRMDFEAFFSHPFLDQVPVKKSCPVPVPVPVPAGAIP 123

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

ZFIN|ZDB-GENE-080723-31 ulk1a "unc-51-like kinase 1a (C. elegans)" [Danio rerio (taxid:7955)]

 Score = 239 (89.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
 Identities = 51/117 (43%), Positives = 68/117 (58%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MS  YDAKADL+SVGTI++QCLTGKAPF A++P +L+Q+YE+N  L P +P  TS+    
Sbjct:   192 MSHNYDAKADLWSVGTIIYQCLTGKAPFQASTPQELRQFYERNRSLSPSIPRETSSHLRH 251

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFLQP---LAPHPLIPEPHAGSPVTLSPEDSTDDF 114
                    RN  +RI F+  F HPFL+    +     +P P    PV   P   +  F
Sbjct:   252 LLLGLLQRNQRERIDFDDFFHHPFLEASTSMKKSSPVPVP---VPVPTYPSSGSGSF 305

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2RF62 ULK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 250 (93.1 bits), Expect = 5.0e-20, P = 5.0e-20
 Identities = 51/104 (49%), Positives = 65/104 (62%)

Query:     1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAXXXX 60
             MS  YDAKADL+S+GT+V+QCL GK PF ANSP  L+ +YEKN  L+P +P  TS     
Sbjct:   187 MSQHYDAKADLWSIGTVVYQCLVGKPPFQANSPQDLRMFYEKNRSLMPSIPRETSPYLAN 246

Query:    61 XXXXXXXRNAMDRISFEQLFAHPFLQ--PLAPHPLIPEP-HAGS 101
                    RN  DR+ FE  F+HPFL+  P+     +P P +AGS
Sbjct:   247 LLLGLLQRNQKDRMDFEAFFSHPFLEQVPVKKSCPVPVPVYAGS 290

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	249
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-22
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-18
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-14
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-13
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-12
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-11
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-10
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-10
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-10
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-09
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	9e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	9e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-07
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	8e-07
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	4e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-06
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	8e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	8e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	8e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	8e-06
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	5e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	6e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	6e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	7e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	7e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	7e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	8e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	9e-05
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-04
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	3e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	4e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	4e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	5e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	6e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	8e-04
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	9e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	9e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.001
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.001
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	0.001
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.001
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.001
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.001
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.001
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.001
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.002
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.002
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.002
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.002
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.002
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	0.002
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	0.002
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.002
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.002
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.002
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.002
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.003
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.003
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.003
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	0.003
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.003
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	0.003
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.004
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.004
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.004
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.004
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.004
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.004
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.004
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.004
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 91.4 bits (228), Expect = 4e-22
 Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VAIK I KK + K  +   +EI ILK+L    H N+V L    E +  +YLVME+C G
Sbjct: 25  KLVAIKVIKKKKIKKDRERILREIKILKKL---KHPNIVRLYDVFEDEDKLYLVMEYCEG 81

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GDL D L  +G LSED  R +L+  Q+L    Y H 
Sbjct: 82  GDLFDLLKKRGRLSEDEARFYLR--QILSALEYLHS 115

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 80.7 bits (200), Expect = 2e-18
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 9/96 (9%)

Query: 142 QHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VAIK I K++ +   +   +EI ILK+L   +H N+V+L    E + H+YLVME+C G
Sbjct: 19  KKVAIKIIKKEDSSSLLEELLREIEILKKL---NHPNIVKLYGVFEDENHLYLVMEYCEG 75

Query: 201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQ--LYFH 233
           G L D L    G LSED I   L   Q+L+   Y H
Sbjct: 76  GSLKDLLKENEGKLSEDEILRILL--QILEGLEYLH 109

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 7/88 (7%)

Query: 144 VAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           VA+K + K++    K Q   +EI IL+ L    H N+V L+   E   H+YLVME+C GG
Sbjct: 27  VAVKILKKRSEKSKKDQTARREIRILRRL---SHPNIVRLIDAFEDKDHLYLVMEYCEGG 83

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           DL DYL   G LSED  +      Q+L+
Sbjct: 84  DLFDYLSRGGPLSEDEAKKIAL--QILR 109

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 69.1 bits (170), Expect = 4e-14
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP---VGTSAE 57
           +   Y    D++S+G I+++ LTGK PF  +   QL + ++K     P  P      S E
Sbjct: 169 LGKGYGKAVDIWSLGVILYELLTGKPPFPGDD--QLLELFKKIGKPKPPFPPPEWDISPE 226

Query: 58  LKELLLGLLKRNAMDRISFEQLFAHPFL 85
            K+L+  LL ++   R++ E+   HPF 
Sbjct: 227 AKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 66.8 bits (164), Expect = 3e-13
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 17/100 (17%)

Query: 144 VAIKRI-----TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ--HVYLVME 196
           +A+K +     +++ L   +    EI IL  L    H N+V     +  ++   + + +E
Sbjct: 28  MAVKSVELSGDSEEELEALER---EIRILSSLQ---HPNIVRYYGSERDEEKNTLNIFLE 81

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           + +GG L+  L   G L E  IR + +  Q+L+   Y H 
Sbjct: 82  YVSGGSLSSLLKKFGKLPEPVIRKYTR--QILEGLAYLHS 119

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 64.8 bits (159), Expect = 2e-12
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            Y    D +S+G ++++ LTGK PF A      K+ YEK L    + P   S E ++L+ 
Sbjct: 169 GYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPLRFPEFLSPEARDLIS 225

Query: 64  GLLKRNAMDRI---SFEQLFAHPF 84
           GLL+++   R+     E++ AHPF
Sbjct: 226 GLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 144 VAIKRITK-KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VA+K + +  +  + ++F KE  ++K+L    H NVV LL     ++ +YLV+E+  GGD
Sbjct: 26  VAVKTLKEDASEEERKDFLKEARVMKKL---GHPNVVRLLGVCTEEEPLYLVLEYMEGGD 82

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           L DYL     +     +  L L  +L 
Sbjct: 83  LLDYLRKSRPVFPSPEKSTLSLKDLLS 109

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 63.4 bits (155), Expect = 6e-12
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
            + VAIK I  ++  K +    EI ILK+     H N+V+          +++VMEFC+G
Sbjct: 25  GKEVAIKVIKLESKEKKEKIINEIQILKKC---KHPNIVKYYGSYLKKDELWIVMEFCSG 81

Query: 201 GDLADYL-VSKGTLSEDTIRIFLKLHQMLQ 229
           G L D L  +  TL+E  I    K  ++L+
Sbjct: 82  GSLKDLLKSTNQTLTESQIAYVCK--ELLK 109

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 12/89 (13%)

Query: 142 QHVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
             VA+K + +     + + F +E +I+K+L    H N+V LL      + +Y+V E+  G
Sbjct: 29  TKVAVKTLKEGASEEEREEFLEEASIMKKL---SHPNIVRLLGVCTQGEPLYIVTEYMPG 85

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           GDL D+L   G          L L  +LQ
Sbjct: 86  GDLLDFLRKHGEK--------LTLKDLLQ 106

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 136 LSPAPSQHVAIKRITK-KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV 194
                   VA+K + +  +  + + F +E  I+++L    H NVV+LL     ++ +Y+V
Sbjct: 23  KGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL---DHPNVVKLLGVCTEEEPLYIV 79

Query: 195 MEFCNGGDLADYLV-SKGTLSEDTIRIF 221
           ME+  GGDL  YL  ++  LS   +  F
Sbjct: 80  MEYMEGGDLLSYLRKNRPKLSLSDLLSF 107

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 60.6 bits (148), Expect = 5e-11
 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 144 VAIKRITK-KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VA+K + +  +  + + F +E  I+++L    H N+V+LL     ++ + +VME+  GGD
Sbjct: 31  VAVKTLKEDASEQQIEEFLREARIMRKL---DHPNIVKLLGVCTEEEPLMIVMEYMPGGD 87

Query: 203 LADYL 207
           L DYL
Sbjct: 88  LLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 60.7 bits (148), Expect = 5e-11
 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 142 QHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
             VAIK+I+ + + +    +  +EI++LK L    H N+V+ +   E+   +Y+++E+  
Sbjct: 26  DFVAIKQISLEKIKEEALKSIMQEIDLLKNL---KHPNIVKYIGSIETSDSLYIILEYAE 82

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            G L   +   G   E  + ++  ++Q+LQ   Y H+
Sbjct: 83  NGSLRQIIKKFGPFPESLVAVY--VYQVLQGLAYLHE 117

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 59.4 bits (145), Expect = 2e-10
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 25/108 (23%)

Query: 141 SQHVAIKRI-----TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
            +   +K I     ++K      N   E+ ILK+L   +H N+++     E    + +VM
Sbjct: 25  GKLYVLKEIDLSNMSEKEREDALN---EVKILKKL---NHPNIIKYYESFEEKGKLCIVM 78

Query: 196 EFCNGGDLADYL----VSKGTLSEDTIRIFLKLHQMLQL-----YFHD 234
           E+ +GGDL+  +           E+ I     L   +QL     Y H 
Sbjct: 79  EYADGGDLSQKIKKQKKEGKPFPEEQI-----LDWFVQLCLALKYLHS 121

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 144 VAIKRITKKNL---AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
            AIK I K ++    +      E +IL   ++     VV+L +  +  +++YLVME+  G
Sbjct: 21  YAIKVIKKADMIRKNQVDQVLTERDIL---SQAQSPYVVKLYYSFQGKKNLYLVMEYLPG 77

Query: 201 GDLADYLVSKGTLSEDTIRIFL 222
           GDLA  L + G+L ED  RI++
Sbjct: 78  GDLASLLENVGSLDEDVARIYI 99

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 140 PSQHVAIKRITKKNLAKTQNFGKEINILKE-LTEL-HHENVVELLHCKESDQHVYLVMEF 197
            ++  AIK + K+ L K +   K + I KE LT L  H  +++L +  + ++++Y V+E+
Sbjct: 25  TNKEYAIKILDKRQLIK-EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEY 83

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
              G+L  Y+   G+L E   R +    ++L
Sbjct: 84  APNGELLQYIRKYGSLDEKCTRFY--AAEIL 112

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 19/112 (16%)

Query: 144 VAIKRITKKNLAKTQNFGKEIN-ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCN 199
           VA+KR+ K  L K      E+  +L E   LT    E +V+LL+  + D+++YL ME+  
Sbjct: 29  VALKRMKKSLLFKLN----EVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVP 84

Query: 200 GGDLADYLVSKGTLSEDTIRIFL--------KLHQMLQLYFH-DFTPWSFVI 242
           GGD    L + G LSED  R ++         LH++   Y H D  P +F+I
Sbjct: 85  GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL--GYIHRDLKPENFLI 134

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT----SAELK 59
            Y  K D++S+G I+++ LTGK PF   +     Q   + L    +         S E K
Sbjct: 175 GYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAK 234

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFL 85
           +L+   L ++   R + E++  HP+ 
Sbjct: 235 DLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 57.1 bits (139), Expect = 8e-10
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 6/81 (7%)

Query: 145 AIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A+K + KK + K     +  + L E   L+ ++H  +V+L +  ++++ +YLV+E+  GG
Sbjct: 22  AMKVLKKKKIIKR---KEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG 78

Query: 202 DLADYLVSKGTLSEDTIRIFL 222
           +L  +L  +G  SE+  R + 
Sbjct: 79  ELFSHLSKEGRFSEERARFYA 99

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 57.1 bits (139), Expect = 1e-09
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 14/90 (15%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------KQYYEKNLVLVPKVPVGTS 55
           +  Y+ K+D++S+G ++++  T K PF   +  +L       QY        P +P   S
Sbjct: 177 NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY--------PPIPSQYS 228

Query: 56  AELKELLLGLLKRNAMDRISFEQLFAHPFL 85
           +EL+ L+  LL+++  +R S  Q+   PF+
Sbjct: 229 SELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 54.5 bits (132), Expect = 8e-09
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPF--IANSPPQLKQYYEKNLVLVPKVPVGTSAEL 58
              +Y   AD++S+G  V +  TGK P+  + N    L  Y   +    P++P   S E 
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL--YKIGSSGEPPEIPEHLSEEA 233

Query: 59  KELLLGLLKRNAMDRISFEQLFAHPFL 85
           K+ L   L+R+   R + ++L  HPFL
Sbjct: 234 KDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 15/99 (15%)

Query: 141 SQHV-AIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
           +  V A+K + K ++ K     +   E +IL    +     +V+L +  + ++H+YLVME
Sbjct: 25  TGQVYAMKVLRKSDMIKRNQIAHVRAERDIL---ADADSPWIVKLYYSFQDEEHLYLVME 81

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIFL--------KLHQM 227
           +  GGDL + L+ K    E+T R ++         +H++
Sbjct: 82  YMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 144 VAIK--RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           VAIK  R+ K+N    +    EI I+K+     H N+V+          +++VME+ +GG
Sbjct: 47  VAIKKMRLRKQNK---ELIINEILIMKDC---KHPNIVDYYDSYLVGDELWVVMEYMDGG 100

Query: 202 DLADYL-VSKGTLSEDTI 218
            L D +  +   ++E  I
Sbjct: 101 SLTDIITQNFVRMNEPQI 118

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 12/70 (17%)

Query: 163 EINILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT-----LSE 215
           E+NIL+EL    H N+V         S+Q +Y+VME+C GGDLA  L+ K       + E
Sbjct: 49  EVNILREL---KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQ-LIQKCKKERKYIEE 104

Query: 216 DTI-RIFLKL 224
           + I RI  +L
Sbjct: 105 EFIWRILTQL 114

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VA+K + K +    Q F  E +++   T L H N+V+LL        +Y+V E+   G
Sbjct: 30  QKVAVKCL-KDDSTAAQAFLAEASVM---TTLRHPNLVQLLGVVLQGNPLYIVTEYMAKG 85

Query: 202 DLADYLVSKG 211
            L DYL S+G
Sbjct: 86  SLVDYLRSRG 95

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 140 PSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
             ++ A+K ++K  + K    ++   E  IL+ +    H  +V L    + D ++YLVME
Sbjct: 25  SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI---RHPFLVNLYGSFQDDSNLYLVME 81

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIF 221
           +  GG+L  +L   G   E   R +
Sbjct: 82  YVPGGELFSHLRKSGRFPEPVARFY 106

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ---YYEKNLVLVPKVPVGTSAE 57
               Y  + D +S+G I+++ L G  PF +++  +       ++++L   P  PV  S E
Sbjct: 203 RGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPV--SPE 260

Query: 58  LKELLLGLLKRNAMDRI-SFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVV 116
             +L+  LL  +  DR+ SFE++ +HPF + +    L        P   SP D T +F  
Sbjct: 261 AIDLICRLL-CDPEDRLGSFEEIKSHPFFKGIDWENLRETKPPFVPELSSPLD-TSNFDD 318

Query: 117 IPNSADVVSTSPPRPSSLLLSPA 139
             +  D +S    + S  L    
Sbjct: 319 FEDDKD-LSDYLSQNSKKLNKGK 340

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 17/110 (15%)

Query: 145 AIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQ-HVYLVMEFCNG 200
           A+K + K+++ +T   G++ +I  E   L E +H  +V+L +    D+ ++Y++ME+C G
Sbjct: 22  ALKCVKKRHIVET---GQQEHIFSEKEILEECNHPFIVKL-YRTFKDKKYIYMLMEYCLG 77

Query: 201 GDLADYLVSKGTLSEDTIR--------IFLKLHQMLQLYFHDFTPWSFVI 242
           G+L   L  +G   E T R         F  LH    + + D  P + ++
Sbjct: 78  GELWTILRDRGLFDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLL 126

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIAN---SPPQLKQYYEKNLVLVPKVPVGT-SAE 57
              Y   AD++S+G  + +C  GK PF+     S  +L Q         P +P    S E
Sbjct: 174 GESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI--CDGPPPSLPAEEFSPE 231

Query: 58  LKELLLGLLKRNAMDRISFEQLFAHPFLQ 86
            ++ +   L+++   R S  +L  HPF++
Sbjct: 232 FRDFISACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
             M YD K+D++S+G ++++      PF A +  QL    ++      ++P   S+EL E
Sbjct: 183 NHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG--KFRRIPYRYSSELNE 240

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFL 85
           ++  +L  +   R S E+L   P +
Sbjct: 241 VIKSMLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKE----LTELHHENVVELLHCKESDQHVYLVMEFCN 199
           +A+K++     +      KE+N L+     L  L HE +V+   C   D+ + + ME+  
Sbjct: 30  LAVKQVPFDPDSPETK--KEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMP 87

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG + D L + G L+E   R + +  Q+L+   Y H 
Sbjct: 88  GGSVKDQLKAYGALTETVTRKYTR--QILEGVEYLHS 122

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 8   KADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLK 67
            +DL+++G I++Q LTGK PF  ++     Q   K     P        + K+L+  LL 
Sbjct: 202 SSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP---NFPPDAKDLIEKLLV 258

Query: 68  RNAMDRI----SFEQLFAHPF 84
            +  DR+     +++L AHPF
Sbjct: 259 LDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 17/95 (17%)

Query: 142 QHVAIKRITKKNLAKTQNFG------KEINILKELTELHHENVVELLHCKESDQHVYLVM 195
           + VA+K+I   N    +  G      +EI++LKEL    H N+V+LL    +++ +YLV 
Sbjct: 25  EIVALKKIRLDN----EEEGIPSTALREISLLKEL---KHPNIVKLLDVIHTERKLYLVF 77

Query: 196 EFCNGGDLADYL-VSKGTLSEDTIRIFLKLHQMLQ 229
           E+C+  DL  YL    G LS + I+  +   Q+L+
Sbjct: 78  EYCD-MDLKKYLDKRPGPLSPNLIKSIMY--QLLR 109

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
               Y    D +S+G   ++CL GK P+  +S     Q   K        P   S E  +
Sbjct: 172 CRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAID 231

Query: 61  LLLGLLKRNAMDRIS--FEQLFAHPFL 85
            +  LL+R+   R+    + L  HP+ 
Sbjct: 232 AINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 17/96 (17%)

Query: 142 QHVAIKRITKKNLAKTQNFGK----EINILKELTELHHENVVELLHC-----KESDQHVY 192
           + VAIK+I+  N+       K    EI +L+ L    HEN++ LL        E    VY
Sbjct: 26  RKVAIKKIS--NVFDDLIDAKRILREIKLLRHL---RHENIIGLLDILRPPSPEDFNDVY 80

Query: 193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           +V E     DL   + S   L++D I+ F  L+Q+L
Sbjct: 81  IVTELM-ETDLHKVIKSPQPLTDDHIQYF--LYQIL 113

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHV-YLVMEFCN 199
           VAIKRI   +L K Q    E+   KE   +++ +H NVV+  +         +LVM + +
Sbjct: 29  VAIKRI---DLEKCQTSVDEL--RKEVQAMSQCNHPNVVKY-YTSFVVGDELWLVMPYLS 82

Query: 200 GGDLAD---YLVSKGTLSEDTIRIFLKLHQMLQL--YFHD 234
           GG L D       +G L E  I   LK  ++L+   Y H 
Sbjct: 83  GGSLLDIMKSSYPRGGLDEAIIATVLK--EVLKGLEYLHS 120

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 18/96 (18%)

Query: 144 VAIKRITKKNLAKTQNFG---KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           VAIK I    L    +F    +EI++LKE     H N+V           +++VME+C G
Sbjct: 31  VAIKVI---KLEPGDDFEIIQQEISMLKECR---HPNIVAYFGSYLRRDKLWIVMEYCGG 84

Query: 201 GDLAD-YLVSKGTLSEDTI----RIFLK----LHQM 227
           G L D Y V++G LSE  I    R  LK    LH+ 
Sbjct: 85  GSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 14/95 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VAIK +  +     Q   KEI+ILK+        +V+       +  +++VME+C  G
Sbjct: 29  QVVAIKVVPVEE--DLQEIIKEISILKQC---DSPYIVKYYGSYFKNTDLWIVMEYCGAG 83

Query: 202 DLADYLVSKG-TLSEDTIRIFLK--------LHQM 227
            ++D +     TL+E+ I   L         LH  
Sbjct: 84  SVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------VPKVPVGTSAE 57
           Y   AD++S+G  V +  TGK P+         Q      V        +P +P   S E
Sbjct: 179 YGLAADIWSLGCTVLEMATGKPPW--------SQLEGVAAVFKIGRSKELPPIPDHLSDE 230

Query: 58  LKELLLGLLKRNAMDRISFEQLFAHPFL 85
            K+ +L  L+R+   R +  +L  HPF+
Sbjct: 231 AKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 48.8 bits (116), Expect = 8e-07
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           YD+ AD +S+G ++F+ L G +PF  +      +     L +  ++P   S EL+ LL G
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 232

Query: 65  LLKRNAMDRISF-----EQLFAHPFLQPL---------APHPLIP 95
           LL+R+   R+       +++  HPF + L          P PLIP
Sbjct: 233 LLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 48.3 bits (115), Expect = 8e-07
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 14/87 (16%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL------VPKVPVGTSAEL 58
           Y+ K+D++++G ++++  T K  F A +         KNLVL       P V    S +L
Sbjct: 178 YNNKSDIWALGCVLYEMCTLKHAFEAGN--------MKNLVLKIIRGSYPPVSSHYSYDL 229

Query: 59  KELLLGLLKRNAMDRISFEQLFAHPFL 85
           + L+  L KRN  DR S   +    F+
Sbjct: 230 RNLVSQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 24/141 (17%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ---YYEKNLVLVPKVPVGTSAELKEL 61
           Y+ + D +S+G I+++ L G  PF +++P +  +    +++ L    +VP+  S E K+L
Sbjct: 216 YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPL--SPEAKDL 273

Query: 62  LLGLLKRNAMDRISF---EQLFAHPFLQPL-------APHPLIPEPHAGSPVTLSPEDST 111
           +  L    A  R+      ++ +HPF + +        P P+IPE        L     T
Sbjct: 274 IKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHIRERPAPIIPE--------LKSITDT 324

Query: 112 DDFVVIPNSADVVSTSPPRPS 132
            +F         V TSP  P 
Sbjct: 325 SNFDDFEEIDLDVPTSPGPPR 345

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQY---YEKNLVLVPKVPVGTSAE 57
           M   Y+   D +S+G I+++ L G  PF + +P +  +    +++ LV  P+VP+   A 
Sbjct: 209 MQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKA- 267

Query: 58  LKELLLGLL--KRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFV 115
            K+L+L       N +     E++ +HPF + +    +   P A  P+ +   D T +F 
Sbjct: 268 -KDLILRFCTDSENRIGSNGVEEIKSHPFFEGVDWGHIRERP-AAIPIEIKSIDDTSNFD 325

Query: 116 VIPNSADVVSTSP 128
             P S D++  + 
Sbjct: 326 EFPES-DILQPAE 337

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 144 VAIKRITKKNLAKTQ---NFG--KEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           VAIK+I      + +   NF   +EI +L+EL    H N++ LL       ++ LV EF 
Sbjct: 28  VAIKKIKLGERKEAKDGINFTALREIKLLQEL---KHPNIIGLLDVFGHKSNINLVFEFM 84

Query: 199 NGGDL 203
              DL
Sbjct: 85  -ETDL 88

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-LVLVPKVPVGTSAELKELLL 63
           Y  K+D++S+G  VF+  TGK P  A+       +Y      L+P++P   SA   + + 
Sbjct: 185 YGRKSDIWSIGCTVFEMATGKPPL-ASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVT 243

Query: 64  GLLKRNAMDRISFEQLFAHPFL 85
             L R+  +R S  QL  H FL
Sbjct: 244 SCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.4 bits (111), Expect = 2e-06
 Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 10/196 (5%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIA-NSPPQLKQYYEKNLVLV---------PKVPVG 53
              + +D++S+G  +++ LTG  PF    +     Q  +  L L          P  P  
Sbjct: 187 YASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPEL 246

Query: 54  TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDD 113
            S    +LL  LL ++  +R+S     +H  L  L               +     S   
Sbjct: 247 ISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPP 306

Query: 114 FVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTEL 173
            +    S+            L  S    +       +  + + +       +    L ++
Sbjct: 307 SLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTASSKRSSLPKI 366

Query: 174 HHENVVELLHCKESDQ 189
              +    L      Q
Sbjct: 367 SARSSPSSLSSSSRQQ 382

Length = 384

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 142 QHVAIKRITKK---NLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           + VA+K + KK      + + F +EI IL  L   H  N+V+L    + +  +YLVME+ 
Sbjct: 23  KLVALKVLAKKLESKSKEVERFLREIQILASL--NHPPNIVKLYDFFQDEGSLYLVMEYV 80

Query: 199 NGGDLADYL---VSKGTLSEDTIRIFLK 223
           +GG L D L     KG LSE      L 
Sbjct: 81  DGGSLEDLLKKIGRKGPLSESEALFILA 108

Length = 384

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 27/81 (33%), Positives = 39/81 (48%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y A AD++S+G  + +  TGK PFI    PQ   +      + P++P   SAE K  +L 
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILR 247

Query: 65  LLKRNAMDRISFEQLFAHPFL 85
             + +   R S   L   PFL
Sbjct: 248 CFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 12/93 (12%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVV---ELLHCKESD-QHVYLVM 195
           + VAIK+I          +   +E+ IL+      H+N++   ++L    +D + VY+VM
Sbjct: 31  KKVAIKKIPHAFDVPTLAKRTLRELKILRHF---KHDNIIAIRDILRPPGADFKDVYVVM 87

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           +     DL   + S   L+E+ IR F  L+Q+L
Sbjct: 88  DLM-ESDLHHIIHSDQPLTEEHIRYF--LYQLL 117

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 21/78 (26%), Positives = 44/78 (56%)

Query: 145 AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           A+K + K+   +  +    +N  + L EL+H  +V L +  + ++++YLV++   GGDL 
Sbjct: 29  AMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLR 88

Query: 205 DYLVSKGTLSEDTIRIFL 222
            +L  K   SE+ ++ ++
Sbjct: 89  YHLSQKVKFSEEQVKFWI 106

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
           +EI +LKEL    HEN+V+ L       H+ + +E+  GG +A  L + G   E  +R F
Sbjct: 55  REIALLKEL---QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNF 111

Query: 222 LKLHQMLQ 229
           ++  Q+L+
Sbjct: 112 VR--QILK 117

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 47.0 bits (111), Expect = 4e-06
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF-IANSPPQLKQYYEKNLVLVPKVPV-GTSAELKELL 62
           YD K+D++++G I+++  +GK PF  AN+  QL    ++     P +P+ G S EL  L+
Sbjct: 220 YDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG----PDLPIKGKSKELNILI 275

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAP 90
             LL  +A +R S  Q   +  ++ + P
Sbjct: 276 KNLLNLSAKERPSALQCLGYQIIKNVGP 303

Length = 1021

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 9/83 (10%)

Query: 145 AIKRITKKNL-AKTQNFGKEINILKELTELHHE----NVVELLHCKESDQHVYLVMEFCN 199
           AIK + K ++ AK Q      N+  E   +  +     V +L +  +S  ++YLVME+ N
Sbjct: 25  AIKVLKKSDMIAKNQ----VTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN 80

Query: 200 GGDLADYLVSKGTLSEDTIRIFL 222
           GGD A  + + G L ED  + ++
Sbjct: 81  GGDCASLIKTLGGLPEDWAKQYI 103

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 23/91 (25%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF-----------IANSPPQLKQYYEKNLVLVPKVPVG 53
           Y  KAD++SVG  V + LT K P+           IA  P              P++P  
Sbjct: 184 YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN------------PQLPSH 231

Query: 54  TSAELKELLLGLLKRNAMDRISFEQLFAHPF 84
            S + +  L      NA  R S E+L  H F
Sbjct: 232 VSPDARNFLRRTFVENAKKRPSAEELLRHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VAIK +   +L K Q+F KE+  LK    L H++++ L       + VY++ E    G L
Sbjct: 33  VAIKILKSDDLLKQQDFQKEVQALK---RLRHKHLISLFAVCSVGEPVYIITELMEKGSL 89

Query: 204 ADYLVS 209
             +L S
Sbjct: 90  LAFLRS 95

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y  + D++S+G +V + + G+ P+    P Q  +    NL    K     S  L+  L  
Sbjct: 192 YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDR 251

Query: 65  LLKRNAMDRISFEQLFAHPFLQPLAPHPLI 94
           +L R+   R +  +L  HPFL    P   I
Sbjct: 252 MLVRDPAQRATAAELLNHPFLAKAGPPSSI 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 1   MSMK-YDAKADLYSVGTIVFQCLTGKAPFIANSPP--QLKQYYEKNLVLVPKVPVGT-SA 56
           ++ K YD K+D++S+G  + +  TG+ P+ +   P  QLKQ  E+     P++P    S 
Sbjct: 179 LNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP---SPQLPAEKFSP 235

Query: 57  ELKELLLGLLKRNAMDRISFEQLFAHPFLQP 87
           E ++ +   LK+N  +R ++ +L  HPF + 
Sbjct: 236 EFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
           +EI++LKEL   +H N+V LL    S+  +YLV EF +  DL  Y+ S      D   I 
Sbjct: 47  REISLLKEL---NHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIK 102

Query: 222 LKLHQMLQ-LYF 232
             L+Q+LQ + +
Sbjct: 103 SYLYQLLQGIAY 114

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 45.4 bits (107), Expect = 8e-06
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 6/80 (7%)

Query: 142 QHVAIKRIT-KKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           Q  A+K I   K+ +  ++  KE  +L    ++ H N+V      E+D H+Y+VME+C+G
Sbjct: 26  QKYAMKEIRLPKSSSAVEDSRKEAVLL---AKMKHPNIVAFKESFEADGHLYIVMEYCDG 82

Query: 201 GDLADYL-VSKGTL-SEDTI 218
           GDL   + + +G L  EDTI
Sbjct: 83  GDLMQKIKLQRGKLFPEDTI 102

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 45.4 bits (107), Expect = 8e-06
 Identities = 24/70 (34%), Positives = 39/70 (55%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           YD+ AD +S+G ++F+ L G +PF  +      +     L +  ++P   S ELK LL G
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEG 232

Query: 65  LLKRNAMDRI 74
           LL+R+   R+
Sbjct: 233 LLQRDVSKRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 30/140 (21%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPF-----------IAN---SPPQ--LKQY----- 39
            S +Y    D++SVG I  + LT K  F           I     +P +  LK       
Sbjct: 180 SSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239

Query: 40  --YEKNLVLVPKVPV-----GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP 92
             Y K+L   PK P+     G S E  +LL  +L  +   RI+ ++  AHP+L  L  H 
Sbjct: 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL--HD 297

Query: 93  LIPEPHAGSPVTLSPEDSTD 112
              EP A  P      D  +
Sbjct: 298 PEDEPVAKPPFDFDFFDDDE 317

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 18/96 (18%)

Query: 140 PSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
            +    IK I             E+ +L EL  L H N+V+    +   + VY+ ME+C+
Sbjct: 37  DNDPKTIKEIAD-----------EMKVL-EL--LKHPNLVKYYGVEVHREKVYIFMEYCS 82

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           GG L + L     L E  IR++    Q+L+   Y H
Sbjct: 83  GGTLEELLEHGRILDEHVIRVY--TLQLLEGLAYLH 116

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 142 QHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  A+K+I K+NL    + Q    E +IL   T   +  VV +    E+ +H+ +VME+ 
Sbjct: 27  QRFAMKKINKQNLILRNQIQQVFVERDIL---TFAENPFVVSMFCSFETKRHLCMVMEYV 83

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDF 235
            GGD A  L + G L  D  R++     +   Y H++
Sbjct: 84  EGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY 120

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y  + D++S+G +V + + G+ P+ ++SP Q  +    +     K     S  L++ L  
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLER 253

Query: 65  LLKRNAMDRISFEQLFAHPF-LQPLAPHPLIP 95
           +L R   +R + ++L  HPF LQ   P  L+P
Sbjct: 254 MLTREPQERATAQELLDHPFLLQTGLPECLVP 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 140 PSQHVAIKRITKKNLAKTQN-FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
            +  VAIK + +    K Q  F +E  ++   ++L H N+V LL     +Q   ++ E+ 
Sbjct: 34  SATSVAIKTLKENAEPKVQQEFRQEAELM---SDLQHPNIVCLLGVCTKEQPTCMLFEYL 90

Query: 199 NGGDLADYLVS 209
             GDL ++LV 
Sbjct: 91  AHGDLHEFLVR 101

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 23/83 (27%), Positives = 38/83 (45%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            Y  K D++S+G +  +   G+ P++   P +         +   K P   S E K+ L 
Sbjct: 192 DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN 251

Query: 64  GLLKRNAMDRISFEQLFAHPFLQ 86
             L ++   R S E+L  HPFL+
Sbjct: 252 KCLVKDPEKRPSAEELLQHPFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELL 62
           KY+ K+D++++G ++++ LT K  F A +P  L  +  + N   V       S+EL  L+
Sbjct: 177 KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVS---VYSSELISLV 233

Query: 63  LGLLKRNAMDRISFEQLFAHPFL 85
             LL+++   R + +++   P L
Sbjct: 234 HSLLQQDPEKRPTADEVLDQPLL 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 18/108 (16%)

Query: 134 LLLSPAPSQHVAIKRI-----TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD 188
           L    A  + V IK+I     TK      QN   E  +LK L    H N++E       D
Sbjct: 18  LCRRKADQKLVIIKQIPVEQMTKDERLAAQN---ECQVLKLL---SHPNIIEYYENFLED 71

Query: 189 QHVYLVMEFCNGGDLADYLVSKGT--LSEDTI-----RIFLKLHQMLQ 229
           + + +VME+  GG LA+Y+  +    L EDTI     +I L LH +  
Sbjct: 72  KALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
           KY+   D +S G ++++ L G++PF      +L   ++  L   P  P   S E K+ L 
Sbjct: 172 KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL---FDSILNDRPHFPRWISKEAKDCLS 228

Query: 64  GLLKRNAMDRISFE-QLFAHPFLQPL 88
            L +R+   R+  +  +  HPF + +
Sbjct: 229 KLFERDPTKRLGVDGDIRQHPFFRGI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 140 PSQHVAIKRITKKNLAKTQN----FGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
            +Q VAIK I   +L + ++      +EI  L   ++     + +          ++++M
Sbjct: 25  TNQVVAIKVI---DLEEAEDEIEDIQQEIQFL---SQCRSPYITKYYGSFLKGSKLWIIM 78

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLK 223
           E+C GG   D L+  G L E  I   L+
Sbjct: 79  EYCGGGSCLD-LLKPGKLDETYIAFILR 105

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           +Q VAIK  T K++   Q +G+       + ELHH N+V LL     +Q V ++ E+ N 
Sbjct: 34  AQLVAIK--TLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQ 91

Query: 201 GDLADYLVSKGTLSE 215
           GDL ++L+ +   S+
Sbjct: 92  GDLHEFLIMRSPHSD 106

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 147 KRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY 206
           K + K+N  K     +EI     L  L H  +  L    +++ ++ LVM++C GG+L   
Sbjct: 37  KEMIKRNKVKRVLTEQEI-----LATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRL 91

Query: 207 L--VSKGTLSEDTIRIFL 222
           L       LSE+  R + 
Sbjct: 92  LQRQPGKCLSEEVARFYA 109

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 9/91 (9%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VAIK+I  +  ++   +   +EI +LKEL   +H N+++LL        +YLV EF +
Sbjct: 25  EIVAIKKIKLRFESEGIPKTALREIKLLKEL---NHPNIIKLLDVFRHKGDLYLVFEFMD 81

Query: 200 GGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ 229
             DL   +  +   L E  I+ +  L+Q+LQ
Sbjct: 82  -TDLYKLIKDRQRGLPESLIKSY--LYQLLQ 109

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 140 PSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
                A K I  ++  + ++F  EI+IL   +E  H N+V L      +  +++++EFC+
Sbjct: 29  TGLFAAAKIIQIESEEELEDFMVEIDIL---SECKHPNIVGLYEAYFYENKLWILIEFCD 85

Query: 200 GGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ 229
           GG L   ++     L+E  IR      QML+
Sbjct: 86  GGALDSIMLELERGLTEPQIRYV--CRQMLE 114

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK-VPVGTSAELKELLLG 64
           D  +D +S+G ++F+ L G  PF A +P  +        +  P+ V    S E  +L+  
Sbjct: 171 DKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINR 230

Query: 65  LLKRNAMDRIS---FEQLFAHPF 84
           LL  +   R+    ++++ +HPF
Sbjct: 231 LLCMDPAKRLGANGYQEIKSHPF 253

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 6/69 (8%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGD 202
           VA+K I  KN A  Q F  E +++   T+L H N+V+LL    E    +Y+V E+   G 
Sbjct: 32  VAVKCI--KNDATAQAFLAEASVM---TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86

Query: 203 LADYLVSKG 211
           L DYL S+G
Sbjct: 87  LVDYLRSRG 95

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 144 VAIKRITKK-NLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK + +  ++ +   F  E +++KE    H   VV LL    + Q   +VME    GD
Sbjct: 39  VAIKTVNENASMRERIEFLNEASVMKEFNCHH---VVRLLGVVSTGQPTLVVMELMAKGD 95

Query: 203 LADYLVSK 210
           L  YL S+
Sbjct: 96  LKSYLRSR 103

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK---VPVGTSAELKE 60
           +Y  KAD++S+G I+++ LT   PF   S  ++ Q      VL  K    P   S+ +K 
Sbjct: 247 RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ-----VLYGKYDPFPCPVSSGMKA 301

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLA 89
           LL  LL +N   R + +QL    FL+ +A
Sbjct: 302 LLDPLLSKNPALRPTTQQLLHTEFLKYVA 330

Length = 478

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)

Query: 162 KEINILKELTELHHENVVELL---HCKESDQ--HVYLVMEFCNGGDLADYL--VSKGTLS 214
           +EI +LK+L    H N+V LL   H   +D+   + LV E  +  DLA YL    K  L 
Sbjct: 47  REIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLP 105

Query: 215 EDTIRIFLKLHQML 228
            +TI+    + Q+L
Sbjct: 106 PETIKDL--MRQLL 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 154 LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 213
           L + Q+   E  +LKE++   H  ++ L   +   + +Y++ME+  GG+L  YL + G  
Sbjct: 42  LKQEQHVHNEKRVLKEVS---HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRF 98

Query: 214 SEDTIRIF 221
           S  T   +
Sbjct: 99  SNSTGLFY 106

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 42.3 bits (100), Expect = 9e-05
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           VA+K++  + L      G     L+E   L    H  VV+LL          LVME+   
Sbjct: 28  VALKKVALRRL----EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-P 82

Query: 201 GDLADYL 207
            DL++ L
Sbjct: 83  SDLSEVL 89

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 12/90 (13%)

Query: 144 VAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           VA+KR+   +  +    +  +EI +LKEL    H+N+V L     SD+ + LV E+C+  
Sbjct: 28  VALKRVRLDDDDEGVPSSALREICLLKEL---KHKNIVRLYDVLHSDKKLTLVFEYCD-Q 83

Query: 202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQL 230
           DL  Y  S  G +  + ++ F     M QL
Sbjct: 84  DLKKYFDSCNGDIDPEIVKSF-----MFQL 108

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 32/53 (60%)

Query: 170 LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 222
           L E  +  VV+L +  + + ++YL+ME+  GGD+   L+ K T +E+  R ++
Sbjct: 55  LAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYI 107

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 10/96 (10%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           +AIK I +++    Q   +EI +   L    H N+V+ L     +    + ME   GG L
Sbjct: 36  IAIKEIPERDSRYVQPLHEEIALHSYLK---HRNIVQYLGSDSENGFFKIFMEQVPGGSL 92

Query: 204 ADYLVSK-GTLS--EDTIRIFLKLHQMLQ--LYFHD 234
           +  L SK G L   E TI  + K  Q+L+   Y HD
Sbjct: 93  SALLRSKWGPLKDNEQTIIFYTK--QILEGLKYLHD 126

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 20/89 (22%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV---------PKVPVGTSA 56
              +D++S+G  V + LTG        PP    YY+ N +           P +P G S 
Sbjct: 177 STASDIWSLGCTVIELLTGN-------PP----YYDLNPMAALFRIVQDDHPPLPEGISP 225

Query: 57  ELKELLLGLLKRNAMDRISFEQLFAHPFL 85
           ELK+ L+   +++   R + +QL  HP++
Sbjct: 226 ELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y  KAD++S+G +V + LTGK PF   +  QL+  ++      P++P   S+E  + L  
Sbjct: 189 YTRKADIWSLGCLVVEMLTGKHPFPDCT--QLQAIFKIGENASPEIPSNISSEAIDFLEK 246

Query: 65  LLKRNAMDRISFEQLFAHPFL 85
             + +   R +  +L  HPFL
Sbjct: 247 TFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 21/96 (21%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL----HCKESDQHVYLVMEF 197
           Q VA+K I  K     Q F +E  ++   T+LHH+N+V LL    H       +Y+VME 
Sbjct: 30  QKVAVKNI--KCDVTAQAFLEETAVM---TKLHHKNLVRLLGVILH-----NGLYIVMEL 79

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH 233
            + G+L ++L ++G       R  + + Q+LQ    
Sbjct: 80  MSKGNLVNFLRTRG-------RALVSVIQLLQFSLD 108

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 152 KNLAKTQNFGKE--INILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY 206
           K L K++ F K+   ++  E   L E     VV L +  +  Q++YL+MEF  GGDL   
Sbjct: 32  KTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTM 91

Query: 207 LVSKGTLSEDTIRIFL 222
           L+   T SED  R ++
Sbjct: 92  LIKYDTFSEDVTRFYM 107

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 12/86 (13%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ-----YYEKNLVLVPKVPVGTSAELK 59
           Y  K+D++S+G ++++  T   PF A S   L+       Y       P +P   S +L+
Sbjct: 178 YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY-------PPIPPIYSQDLQ 230

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFL 85
             +  +L+     R + +++ A P +
Sbjct: 231 NFIRSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)

Query: 144 VAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHC--KESDQHVYLVMEFCNG 200
           VA+K + ++     T  + KEINILK L   +HEN+V+   C  ++  + + L+ME+   
Sbjct: 36  VAVKTLKRECGQQNTSGWKKEINILKTL---YHENIVKYKGCCSEQGGKGLQLIMEYVPL 92

Query: 201 GDLADYLVSKGTLSEDTIRIF 221
           G L DYL  K  L+   + +F
Sbjct: 93  GSLRDYL-PKHKLNLAQLLLF 112

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 12/95 (12%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELH---HENVVELLHCKESDQHVYLVMEFCNG 200
            A+K+I   ++   + F K++  L+EL  L       VV+       +  + +V+E+ +G
Sbjct: 29  YALKKI---HVDGDEEFRKQL--LRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDG 83

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           G LAD L   G + E  +    +  Q+L+   Y H
Sbjct: 84  GSLADLLKKVGKIPEPVLAYIAR--QILKGLDYLH 116

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VA+K++   +L K Q      N +  + +  H N+VE+         +++VMEF  GG
Sbjct: 45  RQVAVKKM---DLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG 101

Query: 202 DLADYLVSKGTLSEDTI 218
            L D +V+   ++E+ I
Sbjct: 102 ALTD-IVTHTRMNEEQI 117

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 14/86 (16%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL------VPKVPVGTS 55
           +M Y+ K+D++S+G I+++  T K PF ANS         KNL+L         +P   S
Sbjct: 174 NMPYNNKSDIWSLGCILYELCTLKHPFQANS--------WKNLILKVCQGSYKPLPSHYS 225

Query: 56  AELKELLLGLLKRNAMDRISFEQLFA 81
            EL+ L+  + KRN   R S   + +
Sbjct: 226 YELRSLIKQMFKRNPRSRPSATTILS 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y+ K+D++++G ++++C TGK PF AN+   L     +   + P V    S +L +L+  
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG--VFPPVSQMYSQQLAQLIDQ 235

Query: 65  LLKRNAMDRISFEQLFAHPFL 85
            L ++   R    QL  +P L
Sbjct: 236 CLTKDYRQRPDTFQLLRNPSL 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           + Y  + D++S+G +V + + G+ P+    P +  +    NL    K     S  LK  L
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFL 250

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAP 90
             LL R+   R +  +L  HPFL    P
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFLAKAGP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIA----NSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           +D   D +S+G + F+ LTG +PF      NS  ++ +   K+    P  P   SAE ++
Sbjct: 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS---KPPFPKTMSAEARD 241

Query: 61  LLLGLLKRNAMDRISF---EQLFAHPFLQPL 88
            +  LL+++   R+     +++  HPF Q +
Sbjct: 242 FIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 8/70 (11%)

Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSEDTIR 219
           +EI++LKEL    H N+V+LL    ++  +YLV EF +  DL  ++       +    I+
Sbjct: 48  REISLLKELN---HPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIK 103

Query: 220 IFLKLHQMLQ 229
            +  L Q+LQ
Sbjct: 104 SY--LFQLLQ 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 17/106 (16%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSP--PQLK-QYYEKNLVLVPKVPVGTSAELKEL 61
           Y    D +SVG I+++ L G+ PF+A++P   QLK   +E  L +  +  +  S E  +L
Sbjct: 221 YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKL--SREASDL 278

Query: 62  LLGLLKRNAMDRI---SFEQLFAHPFLQPL--------APHPLIPE 96
           +L L    A DR+     +++ AHPF + +           P IP+
Sbjct: 279 ILRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASLIRRQKAPYIPK 323

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 167 LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKLH 225
           +K L +L HEN+V L         +YLV E+     L + L  S G L  D +R    + 
Sbjct: 51  VKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLPPDAVR--SYIW 107

Query: 226 QMLQ 229
           Q+LQ
Sbjct: 108 QLLQ 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 23/109 (21%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSP--PQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           Y    D +SVG I+F+ L G+ PF+A +P   QLK    +N + +P   V  S E  +L+
Sbjct: 225 YTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPP-QVKLSPEAVDLI 283

Query: 63  LGL-------LKRNAMDRISFEQLFAHPFLQPL--------APHPLIPE 96
             L       L RN  D I      AHPF   +         P P +P+
Sbjct: 284 TKLCCSAEERLGRNGADDIK-----AHPFFSEVDFSSDIRTQPAPYVPK 327

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRI 220
           +EI++LKEL    H N+V L      +  +YL+ EF +  DL  YL S       D   +
Sbjct: 48  REISLLKEL---QHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELV 103

Query: 221 FLKLHQMLQ 229
              L+Q+LQ
Sbjct: 104 KSYLYQILQ 112

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 141 SQHVAIKRI--TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           S+H  IK I  TK  + + +   KE+ IL  L ++ H N+V      + +  +++VME+C
Sbjct: 25  SEHCVIKEIDLTKMPVKEKEASKKEV-IL--LAKMKHPNIVTFFASFQENGRLFIVMEYC 81

Query: 199 NGGDLADYL-VSKGTL-SEDTI 218
           +GGDL   +   +G L SED I
Sbjct: 82  DGGDLMKRINRQRGVLFSEDQI 103

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 144 VAIKRITKKNLAKTQ-NFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGG 201
           V +K + K      Q  F +E+++ ++L+   H+NVV LL  C+E++ H Y+++E+ + G
Sbjct: 38  VLVKALQKTKDENLQSEFRRELDMFRKLS---HKNVVRLLGLCREAEPH-YMILEYTDLG 93

Query: 202 DLADYLV 208
           DL  +L 
Sbjct: 94  DLKQFLR 100

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 17/106 (16%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELT---ELHHENVVELLHCKESDQ--HVYLVMEFC 198
           VA+K++   N    +  G  I+ L+E+T    L H N+VEL           ++LVME+C
Sbjct: 35  VALKKVRMDN----ERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYC 90

Query: 199 NGGDLADYLVS-KGTLSEDTIR-IFLKLHQMLQLYFHDFTPWSFVI 242
              DLA  L +     SE  ++ + L+L + LQ Y H+    +F+I
Sbjct: 91  E-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQ-YLHE----NFII 130

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 24/88 (27%), Positives = 42/88 (47%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           + Y  + D++S+G +V + + G+ P+    P Q  +    NL    K     S+ L+  L
Sbjct: 193 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFL 252

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAP 90
             +L R    R + ++L  HPFL+   P
Sbjct: 253 DLMLVREPSQRATAQELLQHPFLKLAGP 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 13/95 (13%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPV------GTSAEL 58
           YD KAD++S+G  +++  TG       +PP       + ++L+PK         G S  L
Sbjct: 179 YDTKADIWSLGITIYEMATG-------NPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLL 231

Query: 59  KELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
           +E +   L     +R+S E+L    +++  +  P+
Sbjct: 232 REFVAACLDEEPKERLSAEELLKSKWIKAHSKTPV 266

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 24/120 (20%)

Query: 140 PSQHVAIKRITKKNLA-------KTQNFGK---EINILKELTELHHENVVELLHCKESDQ 189
               +A+K I   N A       + ++ G    E+ I+KE  +L H N+V        + 
Sbjct: 25  GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKE--QLRHPNIVRYYKTFLEND 82

Query: 190 HVYLVMEFCNGGDLADYLVS----KGTLSEDTI-RIFLK-------LHQMLQLYFHDFTP 237
            +Y+VM+   G  L ++  S    K   +E+ I  IF++       LH+  ++   D TP
Sbjct: 83  RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTP 142

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 8/89 (8%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK--NLVLVPKVPVGTSAELK 59
              +    D +S+G I+++ L G  PF   +P ++   ++   N  +     V  S E  
Sbjct: 175 GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI---FQNILNGKIEWPEDVEVSDEAI 231

Query: 60  ELLLGLLKRNAMDRI---SFEQLFAHPFL 85
           +L+  LL  +   R+   S E++  HPF 
Sbjct: 232 DLISKLLVPDPEKRLGAKSIEEIKNHPFF 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ----LKQYYEKNLVLVPKVPVGTS--AE 57
            YD   D +S+G ++++ L G  PF  ++P +    LK Y+++ L    + PV       
Sbjct: 174 GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK-YWKETL----QRPVYDDPRFN 228

Query: 58  LKELLLGLLKRNAMDRI----SFEQLFAHPFLQPL-------APHPLIPE 96
           L +    L+ +   D      S E +  HPF + +          P +PE
Sbjct: 229 LSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWNELRELKPPFVPE 278

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 141 SQHVAIKRI--TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
            +   IK I  +K +  + +   KE+ +L   + + H N+V+     E + ++Y+VM++C
Sbjct: 25  GKQYVIKEINISKMSPKEREESRKEVAVL---SNMKHPNIVQYQESFEENGNLYIVMDYC 81

Query: 199 NGGDLADYLVS-KGTL-SEDTI 218
            GGDL   + + +G L  ED I
Sbjct: 82  EGGDLYKKINAQRGVLFPEDQI 103

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 26/106 (24%)

Query: 144 VAIKRITKK--------NLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
           VAIK++ KK        NL       +E+  L++L    H N+V+L      +  +Y V 
Sbjct: 27  VAIKKMKKKFYSWEECMNL-------REVKSLRKLN--EHPNIVKLKEVFRENDELYFVF 77

Query: 196 EFCNGGDLADYLVS--KGTLSEDTIR-----IFLKLHQMLQL-YFH 233
           E+   G+L   +        SE  IR     I   L  + +  +FH
Sbjct: 78  EYME-GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFH 122

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 13/88 (14%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP------VGTSAE 57
            YD KAD++S+G    +   G        PP    +  + L L+PK           S  
Sbjct: 174 GYDEKADIWSLGITAIELAKG-------EPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKP 226

Query: 58  LKELLLGLLKRNAMDRISFEQLFAHPFL 85
            K+ +   L ++  +R S ++L  H F+
Sbjct: 227 FKDFVSLCLNKDPKERPSAKELLKHKFI 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           V + R+++K      N   EI IL   + L H N++   +    D  + + ME+ NGG L
Sbjct: 33  VNLTRLSEKERRDALN---EIVIL---SLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTL 86

Query: 204 ADYLV-SKGTL-SEDTI 218
            D +V  KG L  E+ +
Sbjct: 87  YDKIVRQKGQLFEEEMV 103

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGD 202
           VA+K + K      + F +E  I+K+L    H+ +V+L   C E +  +Y+V E+ + G 
Sbjct: 33  VAVKTL-KPGTMSPEAFLQEAQIMKKL---RHDKLVQLYAVCSEEEP-IYIVTEYMSKGS 87

Query: 203 LADYL 207
           L D+L
Sbjct: 88  LLDFL 92

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 19/138 (13%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--KQYYEKNLVLVPKVPVGTSAELKELL 62
           Y  + D +S+G I ++ + G++PF   +  +        +  +  P+ P   S++  +L+
Sbjct: 186 YGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDP-KVSSDFLDLI 244

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPL-------APHPLIPEPHAGSPVTLSPEDSTDDFV 115
             LL     +R+ +E L  HPF   +       +  P +P        TL  +D T +F 
Sbjct: 245 QSLLC-GQKERLGYEGLCCHPFFSKIDWNNIRNSLPPFVP--------TLKSDDDTSNFD 295

Query: 116 VIPNSADVVSTSPPRPSS 133
               ++   S S      
Sbjct: 296 EPEKNSTRRSQSSTTQLK 313

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 10/83 (12%)

Query: 141 SQHVAIKRIT---KKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
           ++ VAIK+++   K++  K Q+  KE+  L++L    H N +E   C   +   +LVME+
Sbjct: 40  NEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL---RHPNTIEYKGCYLREHTAWLVMEY 96

Query: 198 CNG--GDLADYLVSKGTLSEDTI 218
           C G   D+ +  V K  L E  I
Sbjct: 97  CLGSASDILE--VHKKPLQEVEI 117

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 14/87 (16%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKV-------PVGTSAE 57
           YD KAD++S+G    +   GK P+ +  PP       K L  +          P   S E
Sbjct: 174 YDYKADIWSLGITAIELAEGKPPY-SELPPM------KALFKIATNGPPGLRNPEKWSDE 226

Query: 58  LKELLLGLLKRNAMDRISFEQLFAHPF 84
            K+ L   L++N   R + EQL  HPF
Sbjct: 227 FKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 158 QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDT 217
           +   +EI +L +L    H N+V+ L  +  + ++Y+ +E   GG LA  L   G+  E  
Sbjct: 47  KQLEQEIALLSKLQ---HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPV 103

Query: 218 IRIFLKLHQMLQ--LYFHD 234
           IR++ +  Q+L    Y HD
Sbjct: 104 IRLYTR--QILLGLEYLHD 120

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 39.7 bits (92), Expect = 0.001
 Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 5/44 (11%)

Query: 163 EINILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLA 204
           E+N+++EL    H+N+V  +     +++Q +Y++MEFC+ GDL+
Sbjct: 62  EVNVMRELK---HKNIVRYIDRFLNKANQKLYILMEFCDAGDLS 102

Length = 1021

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y    D +++G I+++ L G  PF  ++P +L      + +  P+      A+ ++L+  
Sbjct: 193 YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISR 252

Query: 65  LLKRNAMDRI---SFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDF 114
           LL++N ++R+      ++  H F   L  + L+ +     P  L  ED T  F
Sbjct: 253 LLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQKAEFIP-QLESEDDTSYF 304

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 10/68 (14%)

Query: 167 LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 220
           L+ L  + HENV+ LL         E  Q VYLV     G DL + +  +  LS+D I+ 
Sbjct: 65  LRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQ-KLSDDHIQ- 121

Query: 221 FLKLHQML 228
           FL ++Q+L
Sbjct: 122 FL-VYQIL 128

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y    D +++G ++++ LTG  PF   +  ++   Y K L    + P G   + K+LL+G
Sbjct: 170 YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM---YRKILQEPLRFPDGFDRDAKDLLIG 226

Query: 65  LLKRNAMDRISF---EQLFAHPFLQPL 88
           LL R+   R+ +   +++  HPF   L
Sbjct: 227 LLSRDPTRRLGYNGAQEIKNHPFFSQL 253

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 7/92 (7%)

Query: 135 LLSPAPSQHV-AIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQH 190
           L+    + HV A+K + K ++ + +  G    E +IL E   L    VV++ +  +   +
Sbjct: 19  LVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW---VVKMFYSFQDKLN 75

Query: 191 VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 222
           +YL+MEF  GGD+   L+ K TL+E+  + ++
Sbjct: 76  LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYI 107

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT-SAELKELLL 63
           Y    D +S+G +VF+   G +PF A      +Q Y        + P    S E ++ + 
Sbjct: 174 YTKHVDFWSLGVLVFEMCCGWSPFYA---EDTQQMYRNIAFGKVRFPKNVLSDEGRQFVK 230

Query: 64  GLLKRNAMDRI----SFEQLFAHPFL 85
           GLL RN   R+       +L  HPF 
Sbjct: 231 GLLNRNPQHRLGAHRDAVELKEHPFF 256

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 16/118 (13%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSP--PQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           Y    D +SVG I+++ L G+ PF+A +P   Q+K    +  + +P      S E  +L+
Sbjct: 225 YTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIP-PQAKLSPEASDLI 283

Query: 63  LGL-------LKRNAMDRISFEQLFAHPFLQPLA-PHPLIPEPHAGSPVTLSPEDSTD 112
           + L       L +N  D I      AHPF + +     L  +     P    P D+++
Sbjct: 284 IKLCRGPEDRLGKNGADEIK-----AHPFFKTIDFSSDLRQQSAPYIPKITHPTDTSN 336

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 15/111 (13%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELK 59
               YD   D +++G  +++ + G++PF        K+  ++  + +  + P   S E K
Sbjct: 167 QGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAK 226

Query: 60  ELLLGLLKRNAMDRISF-----EQLFAHPFLQPLA---------PHPLIPE 96
           +L   LL+++   R+       +++  HP  + L            P IP+
Sbjct: 227 DLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIPD 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-----PKVPVGT----- 54
           YD KAD++S G    +  TG AP+ +  PP       K L+L      P +  G      
Sbjct: 184 YDFKADIWSFGITAIELATGAAPY-SKYPPM------KVLMLTLQNDPPSLETGADYKKY 236

Query: 55  SAELKELLLGLLKRNAMDRISFEQLFAHPF 84
           S   ++++   L+++   R + E+L  H F
Sbjct: 237 SKSFRKMISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 16/45 (35%), Positives = 30/45 (66%)

Query: 178 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 222
           VV++ +  +  +++YL+MEF  GGD+   L+ K TLSE+  + ++
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYI 107

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 140 PSQHVAIKRI-TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
               VA+K +    + ++ +    E+ I+  L    HEN+V LL        + ++ E+C
Sbjct: 64  AVMKVAVKMLKPTAHSSEREALMSELKIMSHLGN--HENIVNLLGACTIGGPILVITEYC 121

Query: 199 NGGDLADYLVSK 210
             GDL ++L  K
Sbjct: 122 CYGDLLNFLRRK 133

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 14/88 (15%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK-NLVLVPKV--PVGTSAELKEL 61
           +   AD +S G ++F+ LTG  PF      Q K   E   ++L  K+  P   S E + L
Sbjct: 175 HTQSADWWSFGVLMFEMLTGSLPF------QGKDRKETMTMILKAKLGMPQFLSPEAQSL 228

Query: 62  LLGLLKRNAMDRI-----SFEQLFAHPF 84
           L  L KRN  +R+       E++  HPF
Sbjct: 229 LRALFKRNPANRLGAGPDGVEEIKRHPF 256

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VA+K + +  +   + F KE  ++KE+    H N+V+LL     +   Y++ EF   G+L
Sbjct: 34  VAVKTLKEDTME-VEEFLKEAAVMKEI---KHPNLVQLLGVCTREPPFYIITEFMTYGNL 89

Query: 204 ADYL 207
            DYL
Sbjct: 90  LDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 21/89 (23%)

Query: 142 QHVAIKRITKKNLAKTQNFG----KEINILKELTELHHENVVELL---HCKESDQH---- 190
           Q VA+K++  +N  + + F     +EI IL+ L    HENVV L+     K +  +    
Sbjct: 38  QIVALKKVLMEN--EKEGFPITALREIKILQLL---KHENVVNLIEICRTKATPYNRYKG 92

Query: 191 -VYLVMEFCNGGDLADYLVSKG---TLSE 215
             YLV EFC   DLA  L +K    TLSE
Sbjct: 93  SFYLVFEFCE-HDLAGLLSNKNVKFTLSE 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 10/87 (11%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIAN-----SPPQLKQYYEKNLVLVPKVPVGTSAELK 59
           YD   D ++VG + ++ LTGK PF  +         L +  +K L  +  V    S    
Sbjct: 183 YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNV----SKNAN 238

Query: 60  ELLLGLLKRNAMDR-ISFEQLFAHPFL 85
           + +  +LK N   R  ++ ++  HPFL
Sbjct: 239 DFVQSMLKYNINYRLTNYNEIIKHPFL 265

Length = 267

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 5/66 (7%)

Query: 148 RITKKNLAKTQNFGKEINILKELT---ELHHENVVELL-HCKESDQHVYLVMEFCNGGDL 203
           R+  K L  +    +++  L+E+    EL+H NV++ L  C ES  ++ LV+EFC  GDL
Sbjct: 24  RVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYL-LVLEFCPLGDL 82

Query: 204 ADYLVS 209
            +YL S
Sbjct: 83  KNYLRS 88

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 158 QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 211
           + F +E  ILK+     H N+V+L+      Q +Y+VME   GG L  +L  K 
Sbjct: 37  RKFLQEAEILKQYD---HPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK 87

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 140 PSQHVAIKRI-TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVME 196
             + VA+K +          +F +EI IL+ L    HEN+V+     E    + + L+ME
Sbjct: 32  TGEQVAVKSLNHSGEEQHRSDFEREIEILRTL---DHENIVKYKGVCEKPGGRSLRLIME 88

Query: 197 FCNGGDLADYL 207
           +   G L DYL
Sbjct: 89  YLPSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 15/93 (16%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVE-------LLHCKESDQHVYLV 194
           Q VAIK I      + +   +E NIL++ +  +H N+                DQ ++LV
Sbjct: 32  QLVAIK-IMDIIEDEEEEIKEEYNILRKYS--NHPNIATFYGAFIKKNPPGNDDQ-LWLV 87

Query: 195 MEFCNGG---DLADYLVSKG-TLSEDTIRIFLK 223
           ME C GG   DL   L  KG  L E+ I   L+
Sbjct: 88  MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 160 FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 211
           F +E  ILK+ +   H N+V L+      Q +Y+VME   GGD   +L ++G
Sbjct: 40  FLQEARILKQYS---HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 88

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.2 bits (88), Expect = 0.002
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 13/87 (14%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT------SAEL 58
           YD K+DL+S+G    +   G       +PP    +  + L L+P+ P         S + 
Sbjct: 193 YDFKSDLWSLGITAIEMAEG-------APPLCDMHPMRALFLIPRNPAPRLKSKKWSKKF 245

Query: 59  KELLLGLLKRNAMDRISFEQLFAHPFL 85
           +  +   L +N   R + EQL  HPF+
Sbjct: 246 QSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 37/118 (31%)

Query: 4   KYDAKA-DLYSVGTIVFQCLTGKAPF--------------IANSPPQLKQYYEKNLVLVP 48
            YD  A D++S+G  + +   G+ PF              I  S P             P
Sbjct: 248 AYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-------------P 294

Query: 49  KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFL---------QPLAPHPLIPEP 97
           + P   S E +  +   L+R    R S  QL  HPF+              H L+P P
Sbjct: 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQGGPNLHQLLPPP 352

Length = 353

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 107 PEDSTDDFVVI-PNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEIN 165
           P    D+F+ I   S  +V  +  + S  L        VA+K++  +   + +    E+ 
Sbjct: 18  PRTYLDNFIKIGEGSTGIVCIATVKSSGKL--------VAVKKMDLRKQQRRELLFNEVV 69

Query: 166 ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 218
           I+++     HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I
Sbjct: 70  IMRDY---QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQI 118

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 15/95 (15%)

Query: 142 QHVAIKRITKKNLAKTQNFG----KEINILKELTELHHENVVELLHCKESDQH--VYLVM 195
           + VA+K+I  +N  + + F     +EI +L++L    H N+V L     S     +Y+V 
Sbjct: 25  ELVALKKIRMEN--EKEGFPITAIREIKLLQKL---RHPNIVRLKEIVTSKGKGSIYMVF 79

Query: 196 EFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ 229
           E+ +  DL   L S     +E  I+ ++K  Q+L+
Sbjct: 80  EYMD-HDLTGLLDSPEVKFTESQIKCYMK--QLLE 111

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 24/115 (20%)

Query: 132 SSLLLSPAPSQ---HVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD 188
           + L+ S   S     VA+K+I   +    ++  +EI I++    L H+N+V++       
Sbjct: 18  NGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIR---RLDHDNIVKVYEVLGPS 74

Query: 189 QH--------------VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
                           VY+V E     DLA+ ++ +G LSE+  R+F  ++Q+L+
Sbjct: 75  GSDLTEDVGSLTELNSVYIVQE-YMETDLAN-VLEQGPLSEEHARLF--MYQLLR 125

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 148 RITKKNLAKTQNFGKEINILKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDL 203
           R+  K L K     ++   LKE   ++  +H N+V+LL  C  ++   Y++ME   GGDL
Sbjct: 28  RVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP-QYIIMELMEGGDL 86

Query: 204 ADYL 207
             YL
Sbjct: 87  LSYL 90

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 145 AIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           AIKR+  K  A     ++F  E+ +L +L   HH N++ LL   E   ++YL +E+   G
Sbjct: 38  AIKRM--KEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHG 93

Query: 202 DLADYLVSKGTLSED 216
           +L D+L     L  D
Sbjct: 94  NLLDFLRKSRVLETD 108

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)

Query: 136 LSPAPSQH-VAIKRI--TKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHV 191
           L P   +  VA+K +  T  N A+ ++F +E  +L   T   HEN+V+    C E D   
Sbjct: 29  LEPENDKELVAVKTLKETASNDAR-KDFEREAELL---TNFQHENIVKFYGVCTEGDP-P 83

Query: 192 YLVMEFCNGGDLADYLVSKG 211
            +V E+   GDL  +L S G
Sbjct: 84  IMVFEYMEHGDLNKFLRSHG 103

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP----KVPVGTSAELKE 60
           YD   D +S+G ++++ LTG+ PF  +    ++ Y   N +L      + P       K+
Sbjct: 169 YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIY---NDILKGNGKLEFPNYIDKAAKD 225

Query: 61  LLLGLLKRNAMDRI-----SFEQLFAHPFLQ 86
           L+  LL+RN  +R+       + +  H +  
Sbjct: 226 LIKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 164 INILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTI-RI 220
           I+  + L +L    ++           + +VME+   GDL   L       L ED + R 
Sbjct: 47  IDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRF 106

Query: 221 FLK 223
           F++
Sbjct: 107 FIQ 109

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query: 170 LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 222
           L E  +E VV+L +  +   ++Y VM++  GGD+   L+  G   ED  R ++
Sbjct: 55  LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYI 107

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VA+K++  +   + +    E+ I+++    HHENVV++ +       +++VMEF  GG
Sbjct: 48  KQVAVKKMDLRKQQRRELLFNEVVIMRDY---HHENVVDMYNSYLVGDELWVVMEFLEGG 104

Query: 202 DLADYLVSKGTLSEDTI 218
            L D +V+   ++E+ I
Sbjct: 105 ALTD-IVTHTRMNEEQI 120

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQY---YEKNLVLVPKVPVGTSAE 57
           M   Y+   D +S+G I+++ L G  PF + +P +  +    +++ L+  P+VP+   A 
Sbjct: 209 MQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKA- 267

Query: 58  LKELLLGLL--KRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFV 115
            K+L+L       + +     E++  +PF + +     I E  A  P+ +   D T +F 
Sbjct: 268 -KDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV-DWEHIRERPAAIPIEIKSIDDTSNFD 325

Query: 116 VIPNS 120
             P+S
Sbjct: 326 EFPDS 330

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 24/93 (25%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF------------IANSPPQLKQYYEKNLVLVPKVPV 52
           YDA++D++S+G    +   GK P               N PP LK             P 
Sbjct: 195 YDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS------------PE 242

Query: 53  GTSAELKELLLGLLKRNAMDRISFEQLFAHPFL 85
             S +  + +   L +N   R   E+L  HPF+
Sbjct: 243 NWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 15/108 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINIL-KELTE-LHHENVVELLHCKESDQHVYLVMEFCN 199
           +  A K++ KK L K    G+++ +L KE+ E ++   +V L +  ES  H+ LVM   N
Sbjct: 19  KMYACKKLDKKRLKKKS--GEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMN 76

Query: 200 GGDLADYLVSKGTLSEDTIRI----------FLKLHQMLQLYFHDFTP 237
           GGDL  ++ + G    +  R+           L LH M  + + D  P
Sbjct: 77  GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKP 123

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGG 201
           VA+K++        ++F +EI ILK    L H+N+V+      S   +++ LVME+   G
Sbjct: 36  VAVKKLQHSTAEHLRDFEREIEILK---SLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYG 92

Query: 202 DLADYL 207
            L DYL
Sbjct: 93  SLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVEL-----LHCKESDQHVYLV 194
           + VAIK+I     N    +   +EI +L+ L    HENV+ +        +E+   VY+V
Sbjct: 31  EKVAIKKIANAFDNRIDAKRTLREIKLLRHL---DHENVIAIKDIMPPPHREAFNDVYIV 87

Query: 195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
            E  +  DL   + S  TLS+D  + F  L+Q+L
Sbjct: 88  YELMD-TDLHQIIRSSQTLSDDHCQYF--LYQLL 118

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
KOG0595|consensus	429		99.96
KOG0603|consensus	612		99.95
KOG0615|consensus	475		99.94
KOG0616|consensus	355		99.92
KOG0581|consensus	364		99.92
KOG0598|consensus	357		99.92
KOG0610|consensus	459		99.91
KOG0575|consensus	592		99.91
KOG0605|consensus	550		99.89
KOG0592|consensus	604		99.89
KOG0583|consensus	370		99.88
KOG0611|consensus	668		99.88
KOG0588|consensus	786		99.88
KOG0600|consensus	560		99.87
KOG0661|consensus	538		99.87
KOG0032|consensus	382		99.86
KOG0607|consensus	463		99.86
KOG0604|consensus	400		99.86
KOG0198|consensus	313		99.85
KOG0597|consensus	808		99.85
KOG0580|consensus	281		99.85
KOG0593|consensus	396		99.84
KOG0659|consensus	318		99.84
KOG0605|consensus	550		99.84
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.83
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.83
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.83
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.83
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.83
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.83
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.83
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.82
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.82
KOG0663|consensus	419		99.82
KOG0599|consensus	411		99.82
KOG1187|consensus	361		99.82
KOG0586|consensus	596		99.82
KOG0192|consensus	362		99.82
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.82
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.82
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.82
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.82
KOG0585|consensus	576		99.82
KOG0582|consensus	516		99.81
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.81
KOG0610|consensus	459		99.81
KOG4717|consensus	864		99.81
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.81
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.81
KOG0694|consensus	694		99.81
KOG0578|consensus	550		99.8
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.8
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.8
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.8
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.8
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.8
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.8
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.8
KOG0033|consensus	355		99.8
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.8
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.8
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.79
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.79
KOG0574|consensus	502		99.79
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.79
KOG0594|consensus	323		99.79
KOG0591|consensus	375		99.79
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.79
KOG0589|consensus	426		99.79
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.79
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.79
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.79
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.79
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.79
PTZ00267	478	NIMA-related protein kinase; Provisional	99.79
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.79
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.79
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.79
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.79
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.78
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.78
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.78
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.78
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.78
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.78
KOG0660|consensus	359		99.78
KOG4721|consensus	904		99.78
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.78
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.78
KOG1989|consensus	738		99.77
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.77
KOG0667|consensus	586		99.77
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.77
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.77
KOG4250|consensus	732		99.77
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.77
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.77
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.76
KOG0658|consensus	364		99.76
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.76
KOG4236|consensus	888		99.76
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.76
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.76
KOG0197|consensus	468		99.76
KOG0598|consensus	357		99.76
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.76
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.76
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.76
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.76
KOG0033|consensus	355		99.76
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.76
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.76
KOG0592|consensus	604		99.75
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.75
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.75
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.75
PHA02988	283	hypothetical protein; Provisional	99.75
KOG0694|consensus	694		99.75
KOG0690|consensus	516		99.75
KOG1035|consensus	1351		99.75
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.75
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.75
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.75
KOG0616|consensus	355		99.75
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.75
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.74
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.74
PHA03212	391	serine/threonine kinase US3; Provisional	99.74
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.74
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.74
KOG0581|consensus	364		99.74
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.74
KOG0612|consensus	1317		99.74
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.74
KOG0194|consensus	474		99.74
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.73
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.73
KOG0578|consensus	550		99.73
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.73
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.73
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.73
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.73
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.73
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.73
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.73
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.73
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.73
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.72
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.72
KOG1151|consensus	775		99.72
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.72
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.72
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.72
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.72
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.72
KOG0588|consensus	786		99.72
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.72
KOG0575|consensus	592		99.72
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.72
KOG0986|consensus	591		99.72
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.72
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.72
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.72
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.71
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.71
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.71
KOG0608|consensus	1034		99.71
KOG1290|consensus	590		99.71
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.71
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.71
KOG0662|consensus	292		99.71
PRK10345	210	hypothetical protein; Provisional	99.71
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.71
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.71
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.71
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.71
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.71
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.71
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.71
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.71
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.71
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.71
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.71
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.71
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.71
KOG0201|consensus	467		99.7
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.7
KOG0660|consensus	359		99.7
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.7
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.7
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.7
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.7
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.7
KOG0615|consensus	475		99.7
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.7
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.7
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.7
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.7
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.7
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.7
KOG0577|consensus	948		99.7
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.7
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.7
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.7
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.7
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.7
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.7
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.7
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.7
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.7
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.69
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.69
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.69
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.69
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.69
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.69
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.69
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.69
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.69
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.69
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.69
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.69
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.69
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.69
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.69
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.69
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.69
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.69
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.69
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.68
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.68
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.68
KOG0603|consensus	612		99.68
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.68
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.68
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.68
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.68
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.68
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.68
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.68
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.68
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.68
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.68
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.68
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.68
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.68
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.68
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.68
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.68
PTZ00036	440	glycogen synthase kinase; Provisional	99.68
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.68
KOG4279|consensus	1226		99.68
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.67
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.67
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.67
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.67
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.67
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.67
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.67
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.67
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.67
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.67
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.67
PTZ00283	496	serine/threonine protein kinase; Provisional	99.67
KOG0590|consensus	601		99.67
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.67
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.67
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.67
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.67
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.67
PHA03207	392	serine/threonine kinase US3; Provisional	99.67
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.67
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.67
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.67
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.67
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.66
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.66
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.66
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.66
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.66
PTZ00284	467	protein kinase; Provisional	99.66
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.66
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.66
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.66
KOG4645|consensus	1509		99.66
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.66
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.66
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.66
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.66
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.66
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.66
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.65
KOG4279|consensus	1226		99.65
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.65
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.65
KOG0696|consensus	683		99.65
PTZ00036	440	glycogen synthase kinase; Provisional	99.65
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.65
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.65
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.65
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.65
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.65
KOG0201|consensus	467		99.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.65
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.65
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.65
KOG1026|consensus	774		99.65
KOG0584|consensus	632		99.65
KOG0695|consensus	593		99.65
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.65
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.65
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.65
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.65
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.65
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.65
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.65
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.65
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.65
KOG2345|consensus	302		99.65
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.65
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.65
PHA03211	461	serine/threonine kinase US3; Provisional	99.65
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.64
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.64
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.64
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.64
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.64
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.64
PTZ00284	467	protein kinase; Provisional	99.64
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.64
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.64
PLN00009	294	cyclin-dependent kinase A; Provisional	99.64
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.64
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.64
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.64
KOG0597|consensus	808		99.64
PHA03209	357	serine/threonine kinase US3; Provisional	99.64
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.64
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.64
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.63
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.63
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.63
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.63
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.63
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.63
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.63
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.63
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.63
KOG0582|consensus	516		99.63
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.63
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.63
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.63
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.63
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.63
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.63
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.63
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.62
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.62
KOG4717|consensus	864		99.62
KOG0596|consensus	677		99.62
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.62
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.62
KOG0198|consensus	313		99.62
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.62
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.62
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.62
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.62
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.62
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.62
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.62
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.62
KOG0986|consensus	591		99.62
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.62
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.62
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.61
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.61
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.61
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.61
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.61
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.61
KOG1094|consensus	807		99.61
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.61
KOG0579|consensus	1187		99.61
KOG0667|consensus	586		99.61
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.61
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.61
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.61
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.61
KOG0614|consensus	732		99.61
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.61
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.61
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.61
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.61
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.61
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.61
KOG0583|consensus	370		99.61
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.61
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.61
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.61
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.61
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.6
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.6
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.6
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.6
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.6
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.6
KOG0197|consensus	468		99.6
KOG1152|consensus	772		99.6
KOG0696|consensus	683		99.6
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.6
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.6
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.6
KOG0599|consensus	411		99.6
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.6
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.6
KOG0666|consensus	438		99.6
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.6
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.6
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.59
KOG0612|consensus	1317		99.59
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.59
KOG0659|consensus	318		99.59
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.59
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.59
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.59
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.59
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.59
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.59
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.59
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.59
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.59
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.59
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.59
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.59
KOG0576|consensus	829		99.59
PHA02988	283	hypothetical protein; Provisional	99.59
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.59
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.59
KOG0587|consensus	953		99.59
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.58
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.58
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.58
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.58
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.58
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.58
KOG0983|consensus	391		99.58
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.58
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.58
KOG0579|consensus	1187		99.58
KOG0585|consensus	576		99.58
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.58
KOG0032|consensus	382		99.58
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.58
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.58
KOG0671|consensus	415		99.58
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.58
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.58
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.58
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.57
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.57
KOG0580|consensus	281		99.57
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.57
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.57
KOG0593|consensus	396		99.57
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.57
KOG0614|consensus	732		99.57
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.57
PHA03207	392	serine/threonine kinase US3; Provisional	99.57
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.57
PHA03212	391	serine/threonine kinase US3; Provisional	99.57
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.57
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.57
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.57
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.57
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.57
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.57
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.57
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.57
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.57
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.57
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.57
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.57
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.56
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.56
KOG0671|consensus	415		99.56
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.56
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.56
KOG0193|consensus	678		99.56
KOG1095|consensus	1025		99.56
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.56
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.56
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.56
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.56
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.56
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.56
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.56
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.56
KOG3653|consensus	534		99.56

>KOG0595|consensus

Probab=99.96  E-value=1.2e-28  Score=194.08  Aligned_cols=120  Identities=39%  Similarity=0.607  Sum_probs=111.7

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      .+|.|.++.||.+.+..++..||||++.+.....  .+....|+.+++.++   |||||.|++++.+.+++|+|||||.|
T Consensus        17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~---H~nIV~l~d~~~~~~~i~lVMEyC~g   93 (429)
T KOG0595|consen   17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK---HPNIVRLLDCIEDDDFIYLVMEYCNG   93 (429)
T ss_pred             hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC---CcceeeEEEEEecCCeEEEEEEeCCC
Confidence            4899999999999999999999999998875332  355788999999888   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||.++|++++.++|..++.|+.|++.|+++||       |+||.||||+++
T Consensus        94 GDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~  145 (429)
T KOG0595|consen   94 GDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT  145 (429)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence            999999999999999999999999999999999       999999999998

>KOG0603|consensus

Probab=99.95  E-value=2.3e-27  Score=196.24  Aligned_cols=226  Identities=24%  Similarity=0.323  Sum_probs=169.5

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----HHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----FEQ   78 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~~~   78 (249)
                      +++.++||||||+++|||++|..||.+    ++...+.+   ..+..|..++..+++++..++..+|.+|..     ..+
T Consensus       167 gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~---~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~e  239 (612)
T KOG0603|consen  167 GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK---AELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDE  239 (612)
T ss_pred             ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh---hccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHH
Confidence            578899999999999999999999987    23333322   233456778999999999999999999985     678


Q ss_pred             HhcCCCCCCCCCCCCCC----CCCC------------------CCCcc----cC--CC-CCCCCccccCCc---------
Q psy4166          79 LFAHPFLQPLAPHPLIP----EPHA------------------GSPVT----LS--PE-DSTDDFVVIPNS---------  120 (249)
Q Consensus        79 i~~~~~~~~~~~~~~~~----~~~~------------------~~~~~----~~--~~-~~~~~~~~~~~~---------  120 (249)
                      +++|+||..+.|..+..    .+.+                  ..|..    ..  .. ..+.++..+...         
T Consensus       240 ik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~P~dsp~~~~~~s~~~if~g~sfva~~il~~~~~~~  319 (612)
T KOG0603|consen  240 IKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQVPADSPLLSASGSDHTIFSGPSFVAPGVLEDAVTAP  319 (612)
T ss_pred             HhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCCcccCCCCCCCccccchhcCCCccChHHhhccccCC
Confidence            99999999877762211    0000                  00000    00  00 111222211111         


Q ss_pred             -------cccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         121 -------ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       121 -------~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                             ....+.|+++.+..+.+..+++..++|++.+..    ....+|+.++....  +||||+++++.+.+..+.|+
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~--~h~niv~~~~v~~~~~~~~~  393 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVR--DHPNIVKSHDVYEDGKEIYL  393 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhc--CCCcceeecceecCCceeee
Confidence                   112567778888889999999999999998762    33456777776665  69999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |||++.||.|.+.+...+.+. .++..|+.+++.++.|||       |+||+|||+-
T Consensus       394 v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~  449 (612)
T KOG0603|consen  394 VMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD  449 (612)
T ss_pred             eehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec
Confidence            999999999999998877555 889999999999999999       9999999994

>KOG0615|consensus

Probab=99.94  E-value=1.5e-26  Score=182.40  Aligned_cols=120  Identities=28%  Similarity=0.424  Sum_probs=110.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccch-------hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT-------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..|+|+++.|.++....+++.||+|++.++.....       ....+|+.+|+.++   |||||+++++|+.....|+||
T Consensus       179 ~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~---HP~IV~~~d~f~~~ds~YmVl  255 (475)
T KOG0615|consen  179 TLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS---HPNIVRIKDFFEVPDSSYMVL  255 (475)
T ss_pred             eecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC---CCCEEEEeeeeecCCceEEEE
Confidence            47889999999999999999999999998654431       23579999999887   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++||+|++++-.++.+.|..-+.+++|++.|+.|||       |+|||||||..+
T Consensus       256 E~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~  312 (475)
T KOG0615|consen  256 EYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND  312 (475)
T ss_pred             EEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence            99999999999999999999999999999999999999       999999999987

>KOG0616|consensus

Probab=99.92  E-value=6e-25  Score=166.77  Aligned_cols=121  Identities=24%  Similarity=0.395  Sum_probs=110.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ...|.|+||.|.++.++.++..+|+|.+.+.+..+.   +....|.++++.+.   ||+++++.+.|.+.+.+|+||||.
T Consensus        50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~---~PFlv~l~~t~~d~~~lymvmeyv  126 (355)
T KOG0616|consen   50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS---HPFLVKLYGTFKDNSNLYMVMEYV  126 (355)
T ss_pred             eeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc---CceeEEEEEeeccCCeEEEEEecc
Confidence            457889999999999999999999999998765543   34678888888887   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|+.++++.++|+|..++.|+.||+.|+.|||       |+|||||||-.+
T Consensus       127 ~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~  180 (355)
T KOG0616|consen  127 PGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN  180 (355)
T ss_pred             CCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccC
Confidence            99999999999999999999999999999999999       999999999654

>KOG0581|consensus

Probab=99.92  E-value=1.5e-24  Score=169.26  Aligned_cols=119  Identities=18%  Similarity=0.248  Sum_probs=108.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe-EEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQH-VYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~-~~lv~e~~~  199 (249)
                      +.+|.|..|.|+++.|+.+++.+|+|++..+... .++++.+|+++++.++   ||+||++|+.|.++.. ++|+||||+
T Consensus        85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~---spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ---SPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC---CCCeeeEeEEEEeCCceEEeehhhcC
Confidence            5678899999999999999999999999654322 2467889999999887   9999999999999995 999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVIL  243 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~  243 (249)
                      ||+|.+++...|+++|..+..++.+|+.||.|||        |+||+||||-
T Consensus       162 gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN  213 (364)
T KOG0581|consen  162 GGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN  213 (364)
T ss_pred             CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec
Confidence            9999999999889999999999999999999999        9999999984

>KOG0598|consensus

Probab=99.92  E-value=9.4e-25  Score=170.36  Aligned_cols=121  Identities=25%  Similarity=0.399  Sum_probs=110.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++|.|++|.|+.+....+++.+|+|.+++.....+   +....|..++..+.   ||+||+++..|++.+.+|+|+||+
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~---hPFiv~l~ysFQt~~kLylVld~~  107 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK---HPFIVKLIYSFQTEEKLYLVLDYL  107 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC---CCcEeeeEEecccCCeEEEEEecc
Confidence            578999999999999999999999999998765543   44677888888766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .||+|+..|+++|.|+|..++.|+.+|+.||.|||       |+|||||||-..
T Consensus       108 ~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~  161 (357)
T KOG0598|consen  108 NGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ  161 (357)
T ss_pred             CCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC
Confidence            99999999999999999999999999999999999       999999998654

>KOG0610|consensus

Probab=99.91  E-value=2.4e-24  Score=170.14  Aligned_cols=120  Identities=25%  Similarity=0.322  Sum_probs=107.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchh---cHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..|.|..|.||++....++..+|+|++.+.....++   ..+.|..||+.++   ||.+++||+.|++....|++||||+
T Consensus        84 ~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD---HPFlPTLYa~fet~~~~cl~meyCp  160 (459)
T KOG0610|consen   84 RLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD---HPFLPTLYASFETDKYSCLVMEYCP  160 (459)
T ss_pred             HcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC---CCccchhhheeeccceeEEEEecCC
Confidence            578899999999999999999999999988666543   4567777887776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|..+.+++  +.|++..|+.|+.+|+.||.|||       |+|||||||.-.
T Consensus       161 GGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvred  215 (459)
T KOG0610|consen  161 GGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRED  215 (459)
T ss_pred             CccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecC
Confidence            99999999875  46999999999999999999999       999999998643

>KOG0575|consensus

Probab=99.91  E-value=4.1e-24  Score=176.14  Aligned_cols=121  Identities=26%  Similarity=0.372  Sum_probs=112.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|+|+.||.+.+..+|..||+|++.+....+   +++..+|+.+++.++   |||||+++++|++.+++|||+|+|
T Consensus        24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~---HpnIV~f~~~FEDs~nVYivLELC  100 (592)
T KOG0575|consen   24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK---HPNIVQFYHFFEDSNNVYIVLELC  100 (592)
T ss_pred             eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC---CCcEEeeeeEeecCCceEEEEEec
Confidence            56889999999999999999999999999864433   467899999999998   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +.|+|..++++++.++|.+|+.|++||+.|+.|||       |+|..||+|...
T Consensus       101 ~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~  154 (592)
T KOG0575|consen  101 HRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNEN  154 (592)
T ss_pred             CCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCc
Confidence            99999999999999999999999999999999999       999999998654

>KOG0605|consensus

Probab=99.89  E-value=9.3e-23  Score=165.92  Aligned_cols=123  Identities=25%  Similarity=0.338  Sum_probs=111.0

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      +..+|.|++|.|+++..+.+|..+|+|+++++....+   +.+..|-.+|....   +|.||+||..|++.+++||||||
T Consensus       146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d---s~~vVKLyYsFQD~~~LYLiMEy  222 (550)
T KOG0605|consen  146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD---SPWVVKLYYSFQDKEYLYLIMEY  222 (550)
T ss_pred             heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC---CCcEEEEEEEecCCCeeEEEEEe
Confidence            3688999999999999999999999999998765443   45677888888765   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      ++||++..+|.+.+.|+|..++.|+.+.+.|+.-+|       ||||+|+||-.+.
T Consensus       223 lPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G  278 (550)
T KOG0605|consen  223 LPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG  278 (550)
T ss_pred             cCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC
Confidence            999999999999999999999999999999997766       9999999997653

>KOG0592|consensus

Probab=99.89  E-value=6.5e-23  Score=167.03  Aligned_cols=121  Identities=22%  Similarity=0.377  Sum_probs=110.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.|+++....+++.||+|++.+.-...   .+.+.+|-..|..++  +||.|++|+..|++...+|+|+||+
T Consensus        79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~--~hPgivkLy~TFQD~~sLYFvLe~A  156 (604)
T KOG0592|consen   79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS--GHPGIVKLYFTFQDEESLYFVLEYA  156 (604)
T ss_pred             heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh--CCCCeEEEEEEeecccceEEEEEec
Confidence            46789999999999999999999999998864332   244778999998886  7999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.++|++-|.|+|..+++|+.+|+.|++|||       |+|||||||--
T Consensus       157 ~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~  209 (604)
T KOG0592|consen  157 PNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK  209 (604)
T ss_pred             CCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC
Confidence            99999999999999999999999999999999999       99999999853

>KOG0583|consensus

Probab=99.88  E-value=3.6e-22  Score=163.15  Aligned_cols=122  Identities=31%  Similarity=0.533  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.++.|+.+.+..++..||+|.+.+....     ..+.+.+|+.+++.+.  .||||++++.++.+...+|+|||
T Consensus        23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~--~HpnI~~l~ev~~t~~~~~ivmE  100 (370)
T KOG0583|consen   23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR--SHPNIIRLLEVFATPTKIYIVME  100 (370)
T ss_pred             eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc--cCCCEeEEEEEEecCCeEEEEEE
Confidence            3578899999999999999999999987765221     1245668998888776  59999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||.||+|++++.+++++.|.+++.+++|++.|+.|+|       |+||||||+.-.
T Consensus       101 y~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~  156 (370)
T KOG0583|consen  101 YCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN  156 (370)
T ss_pred             ecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC
Confidence            9999999999999889999999999999999999999       999999999754

>KOG0611|consensus

Probab=99.88  E-value=8.8e-23  Score=161.46  Aligned_cols=124  Identities=26%  Similarity=0.459  Sum_probs=112.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhc---HHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQN---FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ...|.|.+|.|.++.....++.||+|.++++...+.+.   +.+|++|+..++   ||||+.+|..|++.+.+.|||||.
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN---HPhII~IyEVFENkdKIvivMEYa  135 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN---HPHIIQIYEVFENKDKIVIVMEYA  135 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC---CCceeehhhhhcCCceEEEEEEec
Confidence            35688999999999988999999999999987776543   678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecccC
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTISI  248 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~~~  248 (249)
                      .+|+|.+++.+++.++|.+++.|++||.+|+.|+|       |+|.||||+--.-||
T Consensus       136 S~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~Ni  192 (668)
T KOG0611|consen  136 SGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNI  192 (668)
T ss_pred             CCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCe
Confidence            99999999999999999999999999999999999       999999999655443

>KOG0588|consensus

Probab=99.88  E-value=2.5e-22  Score=167.11  Aligned_cols=122  Identities=32%  Similarity=0.463  Sum_probs=109.8

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeeccc-ccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKN-LAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~-~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..|.|..|.|.++.+..+|+..|||++.+.. ..+  ...+.+|+.+|+.+.   |||++++|+.|+++.++|+|+||++
T Consensus        19 TLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~---HpnVl~LydVwe~~~~lylvlEyv~   95 (786)
T KOG0588|consen   19 TLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE---HPNVLRLYDVWENKQHLYLVLEYVP   95 (786)
T ss_pred             cccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc---CCCeeeeeeeeccCceEEEEEEecC
Confidence            3577788899999999999999999998762 222  356889999999988   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeeccc
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTIS  247 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~~  247 (249)
                      ||+|++++-++|+++|.+++.|++||+.|+.|+|       |+||||+||--.-|
T Consensus        96 gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n  150 (786)
T KOG0588|consen   96 GGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN  150 (786)
T ss_pred             CchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC
Confidence            9999999999999999999999999999999999       99999999865433

>KOG0600|consensus

Probab=99.87  E-value=1.2e-21  Score=158.40  Aligned_cols=121  Identities=24%  Similarity=0.317  Sum_probs=107.7

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEe
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVME  196 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e  196 (249)
                      +..+|+|.++.||.+.+..+|+.||+|+++....+.  .....||+.||+.+.   ||||++|.+...+.  +.+|||.|
T Consensus       122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~---HpNIikL~eivt~~~~~siYlVFe  198 (560)
T KOG0600|consen  122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD---HPNIIKLEEIVTSKLSGSIYLVFE  198 (560)
T ss_pred             HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC---CCcccceeeEEEecCCceEEEEEe
Confidence            357899999999999999999999999998765333  355789999999887   99999999998876  78999999


Q ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+. ||..++...+ +|++.+++.||+|++.||.|+|       |||.+||||-+.
T Consensus       199 YMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~  254 (560)
T KOG0600|consen  199 YMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN  254 (560)
T ss_pred             cccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC
Confidence            9986 9999998754 6999999999999999999999       999999999764

>KOG0661|consensus

Probab=99.87  E-value=9.2e-23  Score=163.79  Aligned_cols=119  Identities=23%  Similarity=0.275  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch-hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-eEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQ-HVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-~~~lv~e~~~  199 (249)
                      ...|.|.+|.|+++....++..||||++++.-..-. -.-.||+.-++.++  .|||||+|++.+.++. .+|+|||||+
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln--~hpniikL~Evi~d~~~~L~fVfE~Md   93 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN--PHPNIIKLKEVIRDNDRILYFVFEFMD   93 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC--CCCcchhhHHHhhccCceEeeeHHhhh
Confidence            568999999999999999999999999976432211 22467887777665  4999999999999888 9999999996


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      . +|.++++.+ +.|+|..++.|+.||++||+|+|       |+|||||||+
T Consensus        94 ~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~  144 (538)
T KOG0661|consen   94 C-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS  144 (538)
T ss_pred             h-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec
Confidence            4 999999986 46999999999999999999999       9999999998

>KOG0032|consensus

Probab=99.86  E-value=3.5e-21  Score=157.37  Aligned_cols=122  Identities=29%  Similarity=0.418  Sum_probs=112.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ...|.|.++.++.+..+.+|+.+|+|.+.+......   ..+.+|+.+|+.++  .|||||.+++.|++...+|+|||+|
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~--~hpniv~l~~~~e~~~~~~lvmEL~  118 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS--GHPNIVQLKDAFEDPDSVYLVMELC  118 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc--CCCCEEEEEEEEEcCCeEEEEEEec
Confidence            578999999999999999999999999988765433   47899999999887  5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      +||+|++.|.+. .++|.++..+++|++.++.|+|       |+||||+|+...-
T Consensus       119 ~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~  172 (382)
T KOG0032|consen  119 EGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD  172 (382)
T ss_pred             CCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc
Confidence            999999999987 4999999999999999999999       9999999998764

>KOG0607|consensus

Probab=99.86  E-value=3e-22  Score=153.87  Aligned_cols=122  Identities=19%  Similarity=0.240  Sum_probs=113.9

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      ..|.|+++.|..+.+..++..||||++.+..-..+..+.+|+.++..++  +|+||++|+++|++....|||||-|.||.
T Consensus        85 ~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq--gh~nilqLiefFEdd~~FYLVfEKm~GGp  162 (463)
T KOG0607|consen   85 LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ--GHKNILQLIEFFEDDTRFYLVFEKMRGGP  162 (463)
T ss_pred             HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc--CCccHHHHHHHhcccceEEEEEecccCch
Confidence            5789999999999999999999999999875555678899999999988  89999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         203 LADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       203 L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      |.+.|.+++.|+|.++..+.+.|+.||.|||       |+||||||..-+.
T Consensus       163 lLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn  213 (463)
T KOG0607|consen  163 LLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN  213 (463)
T ss_pred             HHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC
Confidence            9999999999999999999999999999999       9999999987654

>KOG0604|consensus

Probab=99.86  E-value=6e-22  Score=150.90  Aligned_cols=126  Identities=18%  Similarity=0.308  Sum_probs=109.1

Q ss_pred             CCCccccCCccccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe---
Q psy4166         111 TDDFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES---  187 (249)
Q Consensus       111 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~---  187 (249)
                      +++|....   .++|.|..|.|..|.++.++..+|+|.+..+     .+..+|++++...+  .|||||.+++.|.+   
T Consensus        60 tedY~is~---qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s--~h~~iV~IidVyeNs~~  129 (400)
T KOG0604|consen   60 TEDYSISW---QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMAS--GHPHIVSIIDVYENSYQ  129 (400)
T ss_pred             hhhheehh---hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhc--CCCceEEeehhhhhhcc
Confidence            34454443   4677788889999999999999999988654     66789999998887  79999999998764   


Q ss_pred             -CCeEEEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         188 -DQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       188 -~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                       ...+.+|||.|+||+|+..|+.+|.  |+|.++..+++||+.|+.|||       |+||||+|.+.|-
T Consensus       130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~  198 (400)
T KOG0604|consen  130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS  198 (400)
T ss_pred             CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC
Confidence             5579999999999999999999874  999999999999999999999       9999999998774

>KOG0198|consensus

Probab=99.85  E-value=6.9e-21  Score=150.34  Aligned_cols=120  Identities=22%  Similarity=0.368  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--eEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ--HVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--~~~lv~e~~~  199 (249)
                      ..+|.|.+|.|+++.+..++...|+|.+........+...+|+.+++.++   |||||++++......  .++++|||++
T Consensus        23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~---~p~IV~~~G~~~~~~~~~~~i~mEy~~   99 (313)
T KOG0198|consen   23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN---HPNIVQYYGSSSSRENDEYNIFMEYAP   99 (313)
T ss_pred             ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC---CCCEEeeCCccccccCeeeEeeeeccC
Confidence            46788999999999998889999999998763222356789999999988   999999999755444  6999999999


Q ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.+ .++|..++.|++|++.|+.|||       |+||+|||+..
T Consensus       100 ~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~  152 (313)
T KOG0198|consen  100 GGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP  152 (313)
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC
Confidence            999999999977 7999999999999999999999       99999999976

>KOG0597|consensus

Probab=99.85  E-value=1.9e-21  Score=159.45  Aligned_cols=118  Identities=28%  Similarity=0.402  Sum_probs=109.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch--hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.++.||.+.++.+.+.||+|.+.+....++  +...+|+++++.++   |||||+++++|++..++|+|+|||.
T Consensus         8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk---Hpniv~m~esfEt~~~~~vVte~a~   84 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK---HPNIVEMLESFETSAHLWVVTEYAV   84 (808)
T ss_pred             HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC---CcchhhHHHhhcccceEEEEehhhh
Confidence            357899999999999999999999999988654442  56889999999988   9999999999999999999999998


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      | +|+.++...+.++|+.++.++.++..|+.|||       |+||.||||-
T Consensus        85 g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~  134 (808)
T KOG0597|consen   85 G-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE  134 (808)
T ss_pred             h-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec
Confidence            7 99999999999999999999999999999999       9999999985

>KOG0580|consensus

Probab=99.85  E-value=7.3e-22  Score=145.87  Aligned_cols=121  Identities=21%  Similarity=0.313  Sum_probs=108.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ...|.|.||.||++..+.+.-.||+|++-+++...   .+.+.+|+.|-..+.   ||||.++|++|.+...+|+++||.
T Consensus        28 r~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~---hpnilrlY~~fhd~~riyLilEya  104 (281)
T KOG0580|consen   28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR---HPNILRLYGYFHDSKRIYLILEYA  104 (281)
T ss_pred             ccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC---CccHHhhhhheeccceeEEEEEec
Confidence            35677999999999999999999999998876544   256788998888887   999999999999999999999999


Q ss_pred             CCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLV--SKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|+..|+  +.++++|..+..|++|++.|+.|+|       |+||||+|+.-.
T Consensus       105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~  160 (281)
T KOG0580|consen  105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSA  160 (281)
T ss_pred             CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCC
Confidence            9999999999  5567999999999999999999999       999999999754

>KOG0593|consensus

Probab=99.84  E-value=3.8e-21  Score=146.78  Aligned_cols=120  Identities=22%  Similarity=0.282  Sum_probs=104.0

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ++..|.|++|.|+.|.++.+|+.||||+...+....  ++-..||++.++.+.   |+|+|.|+..|.....+++|.|||
T Consensus         7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk---H~NLVnLiEVFrrkrklhLVFE~~   83 (396)
T KOG0593|consen    7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK---HENLVNLIEVFRRKRKLHLVFEYC   83 (396)
T ss_pred             hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc---cchHHHHHHHHHhcceeEEEeeec
Confidence            467899999999999999999999999986543322  355789999999888   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +. ++.+-+.+. ..++.+.++.|+.|++.|+.|+|       |+|||||||+-
T Consensus        84 dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~  136 (396)
T KOG0593|consen   84 DH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ  136 (396)
T ss_pred             ch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec
Confidence            86 555555553 34999999999999999999999       99999999974

>KOG0659|consensus

Probab=99.84  E-value=1.2e-20  Score=141.56  Aligned_cols=120  Identities=25%  Similarity=0.339  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ...|.|.++.||++.+..+|+.||+|++......+  .....||+..++.++   |+||+.|.++|.+.+.+-||.|||+
T Consensus         8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~---h~nIi~LiD~F~~~~~l~lVfEfm~   84 (318)
T KOG0659|consen    8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK---HPNIIELIDVFPHKSNLSLVFEFMP   84 (318)
T ss_pred             hhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc---CcchhhhhhhccCCCceEEEEEecc
Confidence            56799999999999999999999999998765544  245788999988887   9999999999999999999999997


Q ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      . +|+.+|+.+. .++..+++.|+.+++.|++|+|       |+||.|+||+-+
T Consensus        85 t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~  137 (318)
T KOG0659|consen   85 T-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD  137 (318)
T ss_pred             c-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC
Confidence            5 9999998764 5889999999999999999999       999999999854

>KOG0605|consensus

Probab=99.84  E-value=1.8e-20  Score=152.73  Aligned_cols=113  Identities=26%  Similarity=0.376  Sum_probs=86.0

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-cCCCCCCCCCCHHHHHHHHHhhhhCcccCCC---H
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL-VLVPKVPVGTSAELKELLLGLLKRNAMDRIS---F   76 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~   76 (249)
                      ++.+|+..|||||+|||+||||.|.+||.+.++.++.+.+.... ....+.....+++++|||.+||. ||++|..   +
T Consensus       361 l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~  439 (550)
T KOG0605|consen  361 LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGA  439 (550)
T ss_pred             hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccH
Confidence            57899999999999999999999999999999988866543321 11111223478999999999998 9999996   8


Q ss_pred             HHHhcCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCcc
Q psy4166          77 EQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFV  115 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (249)
                      +||..||||..+.|+.+...+.+-.| .+....++..|.
T Consensus       440 ~EIK~HPfF~~v~W~~l~~~~apfvP-~v~~~~DT~yFd  477 (550)
T KOG0605|consen  440 EEIKKHPFFKGVDWDHLREMPAPFVP-QVNSELDTQYFD  477 (550)
T ss_pred             HHHhcCCccccCCcchhhcCCCCCCC-CCCCcccccccc
Confidence            99999999999999998766533222 233333444444

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.83  E-value=4.7e-20  Score=152.97  Aligned_cols=120  Identities=22%  Similarity=0.311  Sum_probs=107.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   .+.+.+|+.+++.+.   |+||+++++++.+...+|+|||||
T Consensus         7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~---h~~iv~l~~~~~~~~~~~lv~E~~   83 (381)
T cd05626           7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD---NEWVVKLYYSFQDKDNLYFVMDYI   83 (381)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC---CCCeeeeEEEEecCCEEEEEEecC
Confidence            56889999999999999999999999998654322   245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+||||..
T Consensus        84 ~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~  136 (381)
T cd05626          84 PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL  136 (381)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC
Confidence            99999999998888999999999999999999999       99999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=3.4e-20  Score=153.68  Aligned_cols=120  Identities=27%  Similarity=0.343  Sum_probs=106.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||++....+++.||+|++.+.....   .+.+.+|+.+++.+.   ||||+++++++.+..++|+||||+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~~~~~~~~~~~~~lv~E~~   83 (377)
T cd05629           7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD---SPWVVSLYYSFQDAQYLYLIMEFL   83 (377)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC---CCCcceEEEEEEcCCeeEEEEeCC
Confidence            46788999999999999999999999997643221   244677888887766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~  136 (377)
T cd05629          84 PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR  136 (377)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=2.6e-20  Score=153.66  Aligned_cols=121  Identities=22%  Similarity=0.360  Sum_probs=107.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||++.+..+++.||+|++.+.....   ...+.+|+.+++.+.   |+||+++++++.+...+|+|||||
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~---h~~iv~~~~~~~~~~~~~lv~E~~   83 (364)
T cd05599           7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD---NPWVVKLYYSFQDENYLYLIMEYL   83 (364)
T ss_pred             EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC---CCCCcceEEEEEcCCeEEEEECCC
Confidence            56788999999999999999999999998653222   234667888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        84 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~  137 (364)
T cd05599          84 PGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAK  137 (364)
T ss_pred             CCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence            99999999998888999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.83  E-value=6.2e-20  Score=149.02  Aligned_cols=120  Identities=20%  Similarity=0.227  Sum_probs=105.1

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||++.+..+++.||+|.+.+.....   ...+.+|+.+++.+.   ||||+++++++.....+|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---hp~i~~~~~~~~~~~~~~lv~e~~~   78 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR---HPFLTALKYSFQTHDRLCFVMEYAN   78 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC---CCCCCCEEEEEEcCCEEEEEEeCCC
Confidence            3578899999999999999999999998653322   234567777777766   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~  131 (323)
T cd05571          79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD  131 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC
Confidence            9999999998888999999999999999999999       999999999654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.83  E-value=6.4e-20  Score=151.26  Aligned_cols=120  Identities=23%  Similarity=0.341  Sum_probs=106.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   ...+.+|+.++..++   |+||+++++.+.+...+|+|||||
T Consensus         7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~---~~~iv~~~~~~~~~~~~~lv~E~~   83 (363)
T cd05628           7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD---SLWVVKMFYSFQDKLNLYLIMEFL   83 (363)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC---CCCcceEEEEEecCCeEEEEEcCC
Confidence            46788999999999998999999999998653222   234667888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~  136 (363)
T cd05628          84 PGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS  136 (363)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC
Confidence            99999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.83  E-value=7.5e-20  Score=148.53  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=104.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+.+..++..||+|.+.+.....   ...+.+|+.+++.+.   ||||++++++|...+.+|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~i~~~~~~~~~~~~~~lv~E~~~   78 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFLTALKYAFQTHDRLCFVMEYAN   78 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC---CCCCcceeeEEecCCEEEEEEeCCC
Confidence            3577899999999998999999999998653322   134556777777666   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  131 (323)
T cd05595          79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD  131 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC
Confidence            9999999998888999999999999999999999       999999999654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.83  E-value=6.3e-20  Score=152.32  Aligned_cols=120  Identities=23%  Similarity=0.326  Sum_probs=106.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|.+.+.....   .+.+.+|+.+++.+.   |+||+++++.+.+...+|+|||||
T Consensus         7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~---h~~iv~~~~~~~~~~~~~lv~E~~   83 (382)
T cd05625           7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD---NEWVVRLYYSFQDKDNLYFVMDYI   83 (382)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC---CCcCCeEEEEEEeCCEEEEEEeCC
Confidence            56789999999999999999999999998653221   245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~  136 (382)
T cd05625          84 PGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR  136 (382)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.82  E-value=6.5e-20  Score=151.94  Aligned_cols=120  Identities=23%  Similarity=0.340  Sum_probs=106.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||++.+..+++.||+|.+.+....   ....+.+|+.+++.+.   |+||+++++.+.+.+.+|+|||||
T Consensus         7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~---h~~iv~~~~~~~~~~~~~lv~E~~   83 (376)
T cd05598           7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD---NEWVVKLYYSFQDKDNLYFVMDYI   83 (376)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC---CCCcceEEEEEEcCCEEEEEEeCC
Confidence            5678899999999999999999999999764322   1245678888888876   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~  136 (376)
T cd05598          84 PGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR  136 (376)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.2e-19  Score=146.75  Aligned_cols=118  Identities=20%  Similarity=0.285  Sum_probs=103.2

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      +|.|.++.+|.+.+..+++.||+|.+.+.....   ...+.+|+.+++.+.   ||||+++++++.+....|+||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~   77 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN---CPFIVPLKFSFQSPEKLYLVLAFING   77 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC---CCcEeceeeEEecCCeEEEEEcCCCC
Confidence            367889999999998899999999997643222   234567777777765   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        78 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~  128 (312)
T cd05585          78 GELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY  128 (312)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC
Confidence            999999998888999999999999999999999       99999999954

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0663|consensus

Probab=99.82  E-value=4.8e-20  Score=142.50  Aligned_cols=121  Identities=17%  Similarity=0.202  Sum_probs=105.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEE--eCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKE--SDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~--~~~~~~lv~e~  197 (249)
                      ..++.|.+|.||++.++.++..||+|+++......  .-...||+.++..+.   |||||.+..+..  +-+.+||||||
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~---H~NIV~vkEVVvG~~~d~iy~VMe~  158 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR---HPNIVEVKEVVVGSNMDKIYIVMEY  158 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC---CCCeeeeEEEEeccccceeeeeHHH
Confidence            57899999999999999999999999998665332  123579999998887   999999998875  45679999999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      |+. +|..++..-+ +|.+.+++.++-|++.|++|||       |+||+|+|+.++-
T Consensus       159 ~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G  214 (419)
T KOG0663|consen  159 VEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG  214 (419)
T ss_pred             HHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC
Confidence            985 9999998855 7999999999999999999999       9999999998753

>KOG0599|consensus

Probab=99.82  E-value=2.4e-20  Score=140.70  Aligned_cols=125  Identities=26%  Similarity=0.385  Sum_probs=109.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ...+.|..+.+-.++++.++..+|+|++.......        .+...+|+.|++.+.  +||+|+++.+.|+++..+++
T Consensus        23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~--GHP~II~l~D~yes~sF~Fl  100 (411)
T KOG0599|consen   23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM--GHPYIIDLQDVYESDAFVFL  100 (411)
T ss_pred             HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc--CCCcEEEeeeeccCcchhhh
Confidence            35677777888899999999999999987542221        245679999999987  89999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecccC
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTISI  248 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~~~  248 (249)
                      |.|.|+.|+|+|++...-.++|.+.+.+|+|+..|+.|||       |+||||||+-..-+|
T Consensus       101 VFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i  162 (411)
T KOG0599|consen  101 VFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNI  162 (411)
T ss_pred             hhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccce
Confidence            9999999999999999888999999999999999999999       999999998765443

>KOG1187|consensus

Probab=99.82  E-value=7.5e-20  Score=149.22  Aligned_cols=118  Identities=24%  Similarity=0.246  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-eEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ-HVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.+|.+..... ..||||++........+.|..|+.++..++   |||+|+|+|||.+.+ ..+||+|||++
T Consensus        81 ~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~---H~Nlv~LlGyC~e~~~~~~LVYEym~n  156 (361)
T KOG1187|consen   81 NLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLR---HPNLVKLLGYCLEGGEHRLLVYEYMPN  156 (361)
T ss_pred             cceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCC---CcCcccEEEEEecCCceEEEEEEccCC
Confidence            4678888999998876443 899999887654331245999999999887   999999999999988 59999999999


Q ss_pred             CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh----------cCCccceeee
Q psy4166         201 GDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH----------DFTPWSFVIL  243 (249)
Q Consensus       201 g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh----------d~kp~nili~  243 (249)
                      |+|.++|....  .++|.....++.+++.|+.|||          |+||+|||+-
T Consensus       157 GsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD  211 (361)
T KOG1187|consen  157 GSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD  211 (361)
T ss_pred             CCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence            99999998865  7899999999999999999999          9999999986

>KOG0586|consensus

Probab=99.82  E-value=6.3e-20  Score=151.76  Aligned_cols=124  Identities=30%  Similarity=0.477  Sum_probs=113.3

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ...++.|.++.|.++.+..++..||+|.+.++....  .+.+.+|+++++.+.   |||||+++.+..+...+|+||||+
T Consensus        61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~---HPnIvkl~~v~~t~~~lylV~eya  137 (596)
T KOG0586|consen   61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN---HPNIVKLFSVIETEATLYLVMEYA  137 (596)
T ss_pred             eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC---CcceeeeeeeeeecceeEEEEEec
Confidence            356889999999999999999999999999876544  256889999999887   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeeccc
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTIS  247 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~~  247 (249)
                      .+|++++++.+++.+.+..++.++.|+..+++|+|       |+|.|||||--.-|
T Consensus       138 ~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mn  193 (596)
T KOG0586|consen  138 SGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMN  193 (596)
T ss_pred             cCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccc
Confidence            99999999999999999999999999999999999       99999999976544

>KOG0192|consensus

Probab=99.82  E-value=1.4e-19  Score=146.91  Aligned_cols=118  Identities=20%  Similarity=0.228  Sum_probs=102.5

Q ss_pred             cccCCCCcceeeccCCCCCCe-eEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-eEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQH-VAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ-HVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~-vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-~~~lv~e~~  198 (249)
                      ..|.|.+|.||.+.  ..|.. ||+|++.......  .+.+.+|+.++..++   |||||+|+|.+.++. .++|||||+
T Consensus        48 ~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~---HpNIV~f~G~~~~~~~~~~iVtEy~  122 (362)
T KOG0192|consen   48 VLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLR---HPNIVQFYGACTSPPGSLCIVTEYM  122 (362)
T ss_pred             hcccCCceeEEEEE--eCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCC---CCCeeeEEEEEcCCCCceEEEEEeC
Confidence            37889999999665  45666 9999998754333  357899999999887   999999999999887 799999999


Q ss_pred             CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         199 NGGDLADYLVS--KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      ++|+|.+++.+  ++.++...+..++-+|+.||.|||        |+||+|||+...
T Consensus       123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~  179 (362)
T KOG0192|consen  123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLK  179 (362)
T ss_pred             CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCC
Confidence            99999999988  577999999999999999999999        899999998754

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.82  E-value=1.5e-19  Score=147.06  Aligned_cols=121  Identities=19%  Similarity=0.293  Sum_probs=105.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.||.+.+..+++.||+|.+.+.....   ...+.+|..++..+.  +||||+++++++.+...+|+|||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~--~hp~Iv~~~~~~~~~~~~~lv~e~~~   79 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS--NHPFLVGLHSCFQTESRLFFVIEFVS   79 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc--CCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            3577889999999999999999999998653322   234667888877664  59999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~  132 (329)
T cd05588          80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE  132 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC
Confidence            9999999988888999999999999999999999       999999999653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.82  E-value=2.2e-19  Score=145.87  Aligned_cols=120  Identities=20%  Similarity=0.226  Sum_probs=103.0

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+.+..+++.||+|.+.+......   ..+..|+++++.+.   ||||+++++++.....+|+||||++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~---hp~i~~~~~~~~~~~~~~lv~E~~~   78 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFLTALKYSFQTHDRLCFVMEYAN   78 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC---CCCCCceEEEEEcCCEEEEEEeCCC
Confidence            35778999999999989999999999986533222   33456666666555   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      ||+|.+++.+.+.+++..+..++.|++.|+.|||        |+||+|||+...
T Consensus        79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~  132 (325)
T cd05594          79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD  132 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC
Confidence            9999999988888999999999999999999999        799999999643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.82  E-value=1.4e-19  Score=147.23  Aligned_cols=121  Identities=23%  Similarity=0.398  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||++....+++.||+|.+.+.....   .+.+.+|+.+++.++   ||||+++++++.+...+|+||||+
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~  100 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS---HPFIVNMMCSFQDENRVYFLLEFV  100 (329)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC---CCCCCcEEEEEEcCCEEEEEEcCC
Confidence            56788999999999999999999999998653222   245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+||||...
T Consensus       101 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~  154 (329)
T PTZ00263        101 VGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK  154 (329)
T ss_pred             CCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC
Confidence            99999999998888999999999999999999999       999999999643

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.82  E-value=2e-19  Score=146.36  Aligned_cols=120  Identities=21%  Similarity=0.233  Sum_probs=104.8

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.||++.+..+++.||+|.+.+.....   ...+.+|+.+++.+.   ||||+++++++...+.+|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~Ey~~   78 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR---HPFLTSLKYSFQTKDRLCFVMEYVN   78 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC---CCCCcceEEEEEcCCEEEEEEeCCC
Confidence            3577889999999999999999999998653222   234667777777666   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+|.+++...+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~  131 (328)
T cd05593          79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD  131 (328)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC
Confidence            9999999988888999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0585|consensus

Probab=99.82  E-value=5.9e-20  Score=147.83  Aligned_cols=120  Identities=28%  Similarity=0.437  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch--------------hcHHHHHHHHHHhhhcCCCCeeeeeEeEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT--------------QNFGKEINILKELTELHHENVVELLHCKES  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------~~~~~e~~~~~~~~~~~h~niv~l~~~~~~  187 (249)
                      ..+|.|.+|.|.++.+..+++.||+|++.+......              +...+|+.+++.+.   |||||+|+.+.++
T Consensus       103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~---H~nVV~LiEvLDD  179 (576)
T KOG0585|consen  103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH---HPNVVKLIEVLDD  179 (576)
T ss_pred             hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC---CcCeeEEEEeecC
Confidence            467999999999999999999999999987533221              35789999999887   9999999999987


Q ss_pred             C--CeEEEEEeccCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         188 D--QHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       188 ~--~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .  ..+|||+|||..|.+.. ....+. +++.+++.|++.+..||.|||       ||||.|+||.-+
T Consensus       180 P~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~  246 (576)
T KOG0585|consen  180 PESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD  246 (576)
T ss_pred             cccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC
Confidence            4  57999999999999754 334445 999999999999999999999       999999999865

>KOG0582|consensus

Probab=99.81  E-value=4.2e-19  Score=141.97  Aligned_cols=122  Identities=23%  Similarity=0.284  Sum_probs=108.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      .++|.|.-+.||++.....+..||||++....-.. -..+.+|++.++.+.   ||||++++.+|.....+|+||.||.+
T Consensus        32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~---HPNIv~~~~sFvv~~~LWvVmpfMa~  108 (516)
T KOG0582|consen   32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID---HPNIVTYHCSFVVDSELWVVMPFMAG  108 (516)
T ss_pred             EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC---CCCcceEEEEEEecceeEEeehhhcC
Confidence            46788877899999999999999999998764433 367889999998887   99999999999999999999999999


Q ss_pred             CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         201 GDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       201 g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      |++.++++..  ..++|..|+.++++++.||.|||       |+|+.||||.-..
T Consensus       109 GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG  163 (516)
T KOG0582|consen  109 GSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG  163 (516)
T ss_pred             CcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC
Confidence            9999999974  23999999999999999999999       9999999997654

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.81  E-value=2.8e-19  Score=147.29  Aligned_cols=120  Identities=23%  Similarity=0.358  Sum_probs=105.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+....+++.||+|++.+.....   ...+.+|+.++..+.   |+||+++++.+.+...+|+|||||
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~iv~~~~~~~~~~~~~lv~E~~   83 (360)
T cd05627           7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD---GAWVVKMFYSFQDKRNLYLIMEFL   83 (360)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEEEEEeCC
Confidence            46788999999999999999999999997643222   244667888877766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+||||..
T Consensus        84 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~  136 (360)
T cd05627          84 PGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA  136 (360)
T ss_pred             CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0610|consensus

Probab=99.81  E-value=7.5e-20  Score=144.95  Aligned_cols=91  Identities=19%  Similarity=0.356  Sum_probs=80.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC----HH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS----FE   77 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~   77 (249)
                      |.+++.+||||+|||++|||+.|.+||.|.+..++...+.......|..+ .++..++|||+++|.+||.+|..    ++
T Consensus       309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~  387 (459)
T KOG0610|consen  309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAA  387 (459)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchH
Confidence            78999999999999999999999999999998887766655555555544 57889999999999999999997    99


Q ss_pred             HHhcCCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHPL   93 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~   93 (249)
                      +|.+||||..++|.-+
T Consensus       388 eIK~HpFF~gVnWaLi  403 (459)
T KOG0610|consen  388 EIKRHPFFEGVNWALI  403 (459)
T ss_pred             HhhcCccccCCChhhe
Confidence            9999999999999843

>KOG4717|consensus

Probab=99.81  E-value=1.7e-19  Score=146.87  Aligned_cols=118  Identities=26%  Similarity=0.422  Sum_probs=107.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      -+|.|.|.+|.++.+--+|.+||||++.+.+..+  ...+.+|++.|+.++   |||||+||...++...+|||+|+=++
T Consensus        25 TlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ---HpNiVRLYEViDTQTKlyLiLELGD~  101 (864)
T KOG4717|consen   25 TLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ---HPNIVRLYEVIDTQTKLYLILELGDG  101 (864)
T ss_pred             hhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc---CcCeeeeeehhcccceEEEEEEecCC
Confidence            4688999999999999999999999999987665  245789999999998   99999999999999999999999999


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |+|++||-++ ..++|..++.|+.||+.|+.|+|       |+||||++.-
T Consensus       102 GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF  152 (864)
T KOG4717|consen  102 GDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF  152 (864)
T ss_pred             chHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe
Confidence            9999999875 35999999999999999999999       9999999863

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.6e-19  Score=144.57  Aligned_cols=121  Identities=22%  Similarity=0.368  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.||+|.+......   ..+.+.+|+.+++.+.   ||||+++++++.+...+|+||||+
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~   83 (291)
T cd05612           7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS---HPFIIRLFWTEHDQRFLYMLMEYV   83 (291)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC---CCcHhhhHhhhccCCeEEEEEeCC
Confidence            4678899999999999989999999999764322   2245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+..+
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~  137 (291)
T cd05612          84 PGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKE  137 (291)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC
Confidence            99999999998888999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3e-19  Score=145.65  Aligned_cols=120  Identities=30%  Similarity=0.358  Sum_probs=106.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.+|.||.+....+++.||+|++.+.....   ...+.+|+.++..+.   ||||+++++++.+...+|+||||+
T Consensus         7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~iv~~~~~~~~~~~~~lv~e~~   83 (333)
T cd05600           7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK---SEWLVKLLYAFQDDEYLYLAMEYV   83 (333)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC---CCCCccEEEEEEcCCEEEEEEeCC
Confidence            46788999999999998899999999998653322   245677888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++...+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~  136 (333)
T cd05600          84 PGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA  136 (333)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0694|consensus

Probab=99.81  E-value=8.3e-20  Score=152.80  Aligned_cols=121  Identities=21%  Similarity=0.321  Sum_probs=106.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+.|.|.||.|+++..+.+++.+|||.+++...-..   +....|.+|+....  +||.+++|+.+|++++++|+||||+
T Consensus       374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~--~HPFL~~L~~~fQT~~~l~fvmey~  451 (694)
T KOG0694|consen  374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN--RHPFLVNLFSCFQTKEHLFFVMEYV  451 (694)
T ss_pred             EEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc--cCCeEeecccccccCCeEEEEEEec
Confidence            467999999999999999999999999998754432   45678889988877  7999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .||+|..+. +.+.|+|..++.|+..|+.||+|||       |+|.+|||+-..
T Consensus       452 ~Ggdm~~~~-~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~e  504 (694)
T KOG0694|consen  452 AGGDLMHHI-HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTE  504 (694)
T ss_pred             CCCcEEEEE-ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEccc
Confidence            999965444 4456999999999999999999999       999999998654

>KOG0578|consensus

Probab=99.80  E-value=9.8e-20  Score=149.34  Aligned_cols=119  Identities=21%  Similarity=0.336  Sum_probs=110.8

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      .+|.|.-|.+|.+....+++.||+|++.......++-...|+.+|+...   |+|||++++.|--.+.+|+|||||+||+
T Consensus       280 kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~---H~NiVnfl~Sylv~deLWVVMEym~ggs  356 (550)
T KOG0578|consen  280 KIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH---HPNIVNFLDSYLVGDELWVVMEYMEGGS  356 (550)
T ss_pred             hhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc---chHHHHHHHHhcccceeEEEEeecCCCc
Confidence            5788888999999999999999999999888777788999999999988   9999999999988899999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         203 LADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       203 L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |.+++.... ++|.+++.++++++.||.|||       |||-+|||+.-.
T Consensus       357 LTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~  405 (550)
T KOG0578|consen  357 LTDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD  405 (550)
T ss_pred             hhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC
Confidence            999998775 999999999999999999999       999999998754

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.80  E-value=3.8e-19  Score=144.45  Aligned_cols=122  Identities=21%  Similarity=0.288  Sum_probs=106.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.+|.+....+++.||+|.+.+.....   .+.+.+|.+++..++.++||||+++++++.+...+|+||||+
T Consensus         5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~   84 (324)
T cd05589           5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYA   84 (324)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCC
Confidence            45788999999999998999999999998653221   245677888877776677999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|..++.+. .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        85 ~~~~L~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~  136 (324)
T cd05589          85 AGGDLMMHIHTD-VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT  136 (324)
T ss_pred             CCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC
Confidence            999999988754 5999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=5.8e-19  Score=143.77  Aligned_cols=122  Identities=21%  Similarity=0.262  Sum_probs=101.8

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccchh---cHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      +|.|.++.||++.+..+++.||+|++.+.......   ....|..++......+||||++++..+.+...+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            36788999999999999999999999765332222   233455555443222599999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~  132 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT  132 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC
Confidence            999999998888999999999999999999999       999999999753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.80  E-value=4.9e-19  Score=143.55  Aligned_cols=121  Identities=20%  Similarity=0.267  Sum_probs=103.9

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+.+..+++.||+|++.+....   ....+..|..++..+.  +||||+++++++.+...+|+||||++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~h~~iv~~~~~~~~~~~~~iv~Ey~~   79 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR--NHPFLTQLYCCFQTPDRLFFVMEFVN   79 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc--CCCchhceeeEEEcCCEEEEEEcCCC
Confidence            357788999999999899999999999865322   1234556777766543  59999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~  132 (320)
T cd05590          80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE  132 (320)
T ss_pred             CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC
Confidence            9999999998888999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.80  E-value=6.3e-19  Score=142.69  Aligned_cols=120  Identities=21%  Similarity=0.252  Sum_probs=102.2

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+....+++.||+|.+.+.....   .+....|..++...  .+||||+++++++.....+|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~--~~hp~i~~~~~~~~~~~~~~lv~e~~~   79 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA--WEHPFLTHLFCTFQTKEHLFFVMEYLN   79 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc--cCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            3578899999999998999999999998653221   23345566555543  259999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++...+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~  131 (316)
T cd05592          80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK  131 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC
Confidence            9999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.80  E-value=7.6e-19  Score=142.52  Aligned_cols=120  Identities=20%  Similarity=0.271  Sum_probs=103.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||++....+++.||+|++.+.....   .+.+..|..++..+.  +||||+++++++.+...+|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~--~hp~i~~~~~~~~~~~~~~lv~E~~~   79 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA--KHPFLTALHCCFQTKDRLFFVMEYVN   79 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc--CCCCccceeeEEEcCCeEEEEEeCCC
Confidence            3578889999999998899999999998653222   234556777776543  59999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~  131 (321)
T cd05591          80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA  131 (321)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC
Confidence            9999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.80  E-value=9e-19  Score=142.44  Aligned_cols=120  Identities=19%  Similarity=0.279  Sum_probs=105.0

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.||++....+++.||+|++.+.....   .+.+.+|..++..+.  +|+||+++++++.+...+|+||||++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS--SNPFLVGLHSCFQTTSRLFLVIEYVN   79 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc--CCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence            4678889999999998999999999998653322   234667888777664  59999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~  131 (327)
T cd05617          80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA  131 (327)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC
Confidence            9999999988888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.80  E-value=5.8e-19  Score=145.78  Aligned_cols=119  Identities=21%  Similarity=0.294  Sum_probs=103.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||++.+..+++.+|+|.+.+.....   .+.+.+|+.+++.+.   ||||+++++++.+...+|+|||||
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~---hp~iv~~~~~~~~~~~~~lv~Ey~  125 (370)
T cd05621          49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN---SPWVVQLFCAFQDDKYLYMVMEYM  125 (370)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEEEEEcCC
Confidence            46788999999999999999999999997643222   234667888887766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++... .+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       126 ~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~  177 (370)
T cd05621         126 PGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK  177 (370)
T ss_pred             CCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence            999999999765 4899999999999999999999       99999999954

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0033|consensus

Probab=99.80  E-value=1.5e-20  Score=139.70  Aligned_cols=121  Identities=21%  Similarity=0.322  Sum_probs=109.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+++.|+|+.|+++.+..+|+.+|+|.++......  .+.+.+|++|-+.++   |||||+|+......+..|+|.|+|+
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq---HP~IvrL~~ti~~~~~~ylvFe~m~   93 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ---HPNIVRLHDSIQEESFHYLVFDLVT   93 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC---CCcEeehhhhhcccceeEEEEeccc
Confidence            56899999999999999999999999998765443  467889999988887   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|..-|-.+-.++|..+..+++|++.++.|.|       |+||+|+|+--.
T Consensus        94 G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK  146 (355)
T KOG0033|consen   94 GGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK  146 (355)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence            9999887777667899999999999999999999       999999998643

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.80  E-value=6.4e-19  Score=142.79  Aligned_cols=119  Identities=24%  Similarity=0.350  Sum_probs=102.1

Q ss_pred             cccCCCCcceeeccC---CCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         123 VVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      .+|.|.++.||.+..   ..+++.||+|++.+.....  .....+|+.+++.++   ||||+++++++.+...+|+||||
T Consensus         3 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN---HPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             eeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC---CCCcccEEEEEEcCCEEEEEEcC
Confidence            467788899987754   4578999999998654322  234567777777766   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++||+|.+++.+...+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  133 (318)
T cd05582          80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE  133 (318)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC
Confidence            999999999988888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.80  E-value=5.6e-19  Score=144.29  Aligned_cols=120  Identities=23%  Similarity=0.303  Sum_probs=103.7

Q ss_pred             ccccCCCCcceeeccCCCC-CCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAP-SQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.+|.+..... +..||+|.+.+.....   .+.+.+|+.+++.+.   ||||+++++++.+...+|+||||
T Consensus        36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~Iv~~~~~~~~~~~~~lv~Ey  112 (340)
T PTZ00426         36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN---HPFCVNLYGSFKDESYLYLVLEF  112 (340)
T ss_pred             EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC---CCCCcceEEEEEeCCEEEEEEeC
Confidence            5678899999999875554 4689999997653222   245677888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++||+|.+++.+++.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       113 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~  166 (340)
T PTZ00426        113 VIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK  166 (340)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC
Confidence            999999999998888999999999999999999999       99999999954

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.79  E-value=9.4e-19  Score=142.11  Aligned_cols=120  Identities=23%  Similarity=0.331  Sum_probs=100.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHH-HHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEIN-ILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~-~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.++.+|.+.+..+++.||+|.+.+......   +.+..|.. +++.+   +||||+++++++.+...+|+||||+
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l---~hp~iv~~~~~~~~~~~~~lv~e~~   78 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV---KHPFLVGLHYSFQTADKLYFVLDYV   78 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC---CCCCCCCeeEEEEeCCEEEEEEcCC
Confidence            35778899999999999999999999986533221   22333433 23444   5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~  132 (323)
T cd05575          79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ  132 (323)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC
Confidence            99999999998888999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.79  E-value=9e-19  Score=142.55  Aligned_cols=121  Identities=19%  Similarity=0.309  Sum_probs=104.4

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.||.+....+++.||+|.+.+.....   ...+.+|..++..+.  +||||+++++++.+...+|+||||++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~--~hp~iv~~~~~~~~~~~~~lv~E~~~   79 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVN   79 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC--CCCcCCceeeEEEeCCEEEEEEeCCC
Confidence            3578899999999999999999999998653322   234567777766543  59999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~  132 (329)
T cd05618          80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE  132 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence            9999999988888999999999999999999999       999999999653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0574|consensus

Probab=99.79  E-value=9.6e-20  Score=139.35  Aligned_cols=128  Identities=19%  Similarity=0.275  Sum_probs=111.7

Q ss_pred             CccccCCccccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEE
Q psy4166         113 DFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVY  192 (249)
Q Consensus       113 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~  192 (249)
                      .-..+.+..++.|.|.+|.|+.++++.+|..+|+|.+...  .+.+.+..|+.++..+.   .+++|++|+.+-....+|
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~---S~yVVKYYGSYFK~sDLW  104 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCK---SKYVVKYYGSYFKHSDLW  104 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcC---CchhhhhhhhhccCCceE
Confidence            3344455557889999999999999999999999999754  33477788888888877   999999999998899999


Q ss_pred             EEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         193 LVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       193 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||||-.|++.++++-+ ++++|.++.-+++..+.||+|||       |+|-.|||+-+.
T Consensus       105 IVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~  165 (502)
T KOG0574|consen  105 IVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD  165 (502)
T ss_pred             eehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc
Confidence            999999999999999865 56999999999999999999999       999999998654

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=7.7e-19  Score=143.07  Aligned_cols=120  Identities=23%  Similarity=0.317  Sum_probs=104.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+....+++.||+|.+.+.....   .+.+.+|..+++.+.   |+||+++++++.+..++|+||||+
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~   83 (331)
T cd05597           7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD---RRWITNLHYAFQDENNLYLVMDYY   83 (331)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC---CCCCCceEEEEecCCeEEEEEecC
Confidence            46788999999999999999999999997643221   234667777777665   999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+ .+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~  137 (331)
T cd05597          84 VGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK  137 (331)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC
Confidence            99999999986 456999999999999999999999       99999999954

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0594|consensus

Probab=99.79  E-value=1.6e-18  Score=135.28  Aligned_cols=120  Identities=25%  Similarity=0.352  Sum_probs=106.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCC-eeeeeEeEEeCC------eEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHEN-VVELLHCKESDQ------HVY  192 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~n-iv~l~~~~~~~~------~~~  192 (249)
                      ..+|.|.++.||.+.+..+|+.||+|+++.+..++  .....+|+.+++.++   |+| |+.|++.+.+..      .+|
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~---~~~~iv~L~dv~~~~~~~~~~~~l~   93 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS---HANHIVRLHDVIHTSNNHRGIGKLY   93 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC---CCcceEEEEeeeeecccccccceEE
Confidence            46899999999999999999999999998765421  255789999999998   999 999999998877      899


Q ss_pred             EEEeccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         193 LVMEFCNGGDLADYLVSKG----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       193 lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+||++ .+|.+++...+    .++...++.+++|++.|+.|||       |+||+||||...
T Consensus        94 lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~  156 (323)
T KOG0594|consen   94 LVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS  156 (323)
T ss_pred             EEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC
Confidence            9999996 59999999865    4777899999999999999999       999999999874

>KOG0591|consensus

Probab=99.79  E-value=2.5e-20  Score=141.03  Aligned_cols=122  Identities=23%  Similarity=0.301  Sum_probs=104.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeE-eEEeCC-eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLH-CKESDQ-HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~-~~~~~~-~~~lv~e~  197 (249)
                      ..+|.|.||.+|.+....++..+|.|.++-.....  ++....|+.+++.++   |||||++++ .|.... -++|||||
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~---HpNIVqYy~~~f~~~~evlnivmE~  101 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN---HPNIVQYYAHSFIEDNEVLNIVMEL  101 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC---CchHHHHHHHhhhccchhhHHHHHh
Confidence            56899999999999999999999999998443222  356788999999887   999999998 555444 49999999


Q ss_pred             cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-----------cCCccceeeeecc
Q psy4166         198 CNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-----------DFTPWSFVILYTI  246 (249)
Q Consensus       198 ~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-----------d~kp~nili~~~~  246 (249)
                      |.+|+|.+.|++    ++.++|..++.|+.|++.|+..+|           ||||.||.|..+.
T Consensus       102 c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g  165 (375)
T KOG0591|consen  102 CDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG  165 (375)
T ss_pred             hcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC
Confidence            999999999985    346999999999999999998888           8999999998664

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.79  E-value=9.5e-19  Score=141.64  Aligned_cols=120  Identities=18%  Similarity=0.194  Sum_probs=103.0

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccc---cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL---AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.||++....++..||+|.+.+...   ...+....|..++...  .+||||+++++++.+...+|+||||++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~--~~~~~i~~~~~~~~~~~~~~lv~E~~~   79 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA--WENPFLTHLYCTFQTKEHLFFVMEFLN   79 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc--cCCCCccCeeEEEEeCCEEEEEECCCC
Confidence            35778899999999999999999999986532   1223455666666543  259999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+++.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~  131 (316)
T cd05620          80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR  131 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC
Confidence            9999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0589|consensus

Probab=99.79  E-value=4.5e-19  Score=144.00  Aligned_cols=121  Identities=23%  Similarity=0.379  Sum_probs=107.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe-EEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQH-VYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~-~~lv~e~~  198 (249)
                      ..+|.|+||.++++.++..++.+++|.+......+  ++...+|+.+++.+.   |||||.+++.|..++. +||||+||
T Consensus        10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~---hP~iv~y~ds~~~~~~~l~Ivm~Y~   86 (426)
T KOG0589|consen   10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL---HPNIVEYKDSFEEDGQLLCIVMEYC   86 (426)
T ss_pred             hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc---CCCeeeeccchhcCCceEEEEEeec
Confidence            46799999999999999999999999998765544  345778888888876   9999999999998887 99999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+.|.+.+  .|+|+.+..|+.|++.|+.|||       |+|+.||++...
T Consensus        87 eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~  142 (426)
T KOG0589|consen   87 EGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKD  142 (426)
T ss_pred             CCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcccc
Confidence            9999999998754  5899999999999999999999       999999998654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.79  E-value=1.1e-18  Score=141.59  Aligned_cols=119  Identities=24%  Similarity=0.322  Sum_probs=100.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHH-HHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEIN-ILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~-~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.++.+|++.+..+++.||+|.+.+.....   ...+..|.. +++.+   +||||+++++.+.+...+|+||||+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~---~h~~iv~~~~~~~~~~~~~lv~e~~   78 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL---KHPFLVGLHYSFQTAEKLYFVLDYV   78 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC---CCCCccceeeEEEcCCEEEEEEcCC
Confidence            4678899999999999999999999998653322   123344443 34444   4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+.+.+.+.+++..++.++.|++.|+.|||       |+||+||+|..
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~  131 (321)
T cd05603          79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS  131 (321)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC
Confidence            99999999988888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.79  E-value=1.2e-18  Score=141.62  Aligned_cols=122  Identities=19%  Similarity=0.222  Sum_probs=104.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++....+++.||+|++.+....   ..+.+..|..++..+.  +|++|+++++++.+.+.+|+||||+
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~i~~~~~~~~~~~~~~lv~E~~   83 (324)
T cd05587           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYV   83 (324)
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC--CCCceeeeEEEEEcCCEEEEEEcCC
Confidence            4678899999999999889999999999865322   1244567777777665  3467899999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~  137 (324)
T cd05587          84 NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAE  137 (324)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCC
Confidence            99999999998888999999999999999999999       999999999654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.79  E-value=1.4e-18  Score=140.67  Aligned_cols=120  Identities=18%  Similarity=0.169  Sum_probs=102.9

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+....+++.||+|.+.+....   .......|..++...  .+||||+++++++.+.+.+|+||||++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~--~~hp~iv~~~~~~~~~~~~~lv~ey~~   79 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA--WEHPFLTHLYCTFQTKENLFFVMEYLN   79 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc--cCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            357889999999999899999999999865321   123455666666543  259999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.+.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~  131 (316)
T cd05619          80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT  131 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC
Confidence            9999999998878999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.79  E-value=1.2e-18  Score=143.87  Aligned_cols=120  Identities=23%  Similarity=0.316  Sum_probs=104.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.+|++.+..+++.||+|.+.+.....   ...+.+|+.+++.+.   ||||+++++++.+...+|+|||||
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~---h~~iv~~~~~~~~~~~~~lv~Ey~  125 (370)
T cd05596          49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN---SEWIVQLHYAFQDDKYLYMVMEYM  125 (370)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCEEEEEEcCC
Confidence            46788999999999999999999999997643222   234567888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++... .+++..+..++.|++.|+.|||       |+||+|||+..+
T Consensus       126 ~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~  178 (370)
T cd05596         126 PGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS  178 (370)
T ss_pred             CCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCC
Confidence            999999999765 4899999999999999999999       999999999643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.79  E-value=1.6e-18  Score=137.95  Aligned_cols=118  Identities=21%  Similarity=0.195  Sum_probs=100.7

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      +|.|.++.+|.+.+..+++.||+|.+.+......   +.+..|+.+++.+.   |+||+++++++.....+|+||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~   77 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH---SRFIVSLAYAFQTKTDLCLVMTIMNG   77 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC---CCcEeeeeEEEcCCCeEEEEEeCCCC
Confidence            3678899999999989999999999976543322   34567778877765   99999999999999999999999999


Q ss_pred             CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++..    ...+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~  132 (280)
T cd05608          78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN  132 (280)
T ss_pred             CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            999988853    345899999999999999999999       99999999965

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=4.6e-18  Score=144.87  Aligned_cols=120  Identities=17%  Similarity=0.240  Sum_probs=102.0

Q ss_pred             ccccCCCCcceeeccCCCC-CCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAP-SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.+|.+.+..+ +..||+|.+..........+.+|+.+++.+.   |||||++++++...+.+|+||||++|
T Consensus        73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~---Hpniv~~~~~~~~~~~~~lv~E~~~g  149 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD---HFGIVKHFDDFKSDDKLLLIMEYGSG  149 (478)
T ss_pred             EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC---CCCEeEEEEEEEECCEEEEEEECCCC
Confidence            4567888999999988777 7889999876544333345677888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+    ...+++..+..++.|++.|+.|+|       |+||+|||+..
T Consensus       150 g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~  204 (478)
T PTZ00267        150 GDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP  204 (478)
T ss_pred             CCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC
Confidence            999988864    346899999999999999999999       99999999864

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.79  E-value=1.6e-18  Score=140.87  Aligned_cols=119  Identities=23%  Similarity=0.313  Sum_probs=100.4

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHH-HHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINI-LKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~-~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.++.||.+.+..+++.+|+|++.+.....   ...+..|... ++.+   +||||+++++.+......|+||||+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~---~hp~iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV---KHPFLVGLHYSFQTTEKLYFVLDFV   78 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC---CCCCCccEEEEEecCCEEEEEEcCC
Confidence            3577889999999998999999999997653222   1233444433 3444   5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~  131 (325)
T cd05604          79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS  131 (325)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC
Confidence            99999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.79  E-value=1.6e-18  Score=140.47  Aligned_cols=121  Identities=19%  Similarity=0.261  Sum_probs=104.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.+|++....++..||+|.+.+.....   ...+.+|..++..+.  +||||+++++++.+...+|+||||++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~--~h~~i~~~~~~~~~~~~~~lv~e~~~   79 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG--KHPFLTQLHSCFQTKDRLFFVMEYVN   79 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc--CCCCccceeeEEEcCCEEEEEEcCCC
Confidence            3577889999999998899999999998653222   234567777776653  59999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~  132 (318)
T cd05570          80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE  132 (318)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC
Confidence            9999999998888999999999999999999999       999999999653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.79  E-value=1.4e-18  Score=141.09  Aligned_cols=119  Identities=23%  Similarity=0.332  Sum_probs=102.4

Q ss_pred             cccCCCCcceeeccC---CCCCCeeEEEEeeccccc----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         123 VVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNLA----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~~----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      .+|.|.+|.+|.+..   ..+++.||+|.+.+....    ....+..|+.+++.++   ||||+++++++...+.+|+||
T Consensus         3 ~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK---HPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             eeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC---CCchhceeeEEecCCeEEEEE
Confidence            467889999998865   357889999999864321    1234567888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~  135 (323)
T cd05584          80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA  135 (323)
T ss_pred             eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC
Confidence            99999999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.79  E-value=1.3e-18  Score=141.31  Aligned_cols=122  Identities=19%  Similarity=0.227  Sum_probs=104.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   .+.+..|..++..+.  +|++|+++++++.+.+.+|+||||+
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~i~~~~~~~~~~~~~~lv~Ey~   83 (323)
T cd05615           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD--KPPFLTQLHSCFQTVDRLYFVMEYV   83 (323)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc--CCCchhheeeEEecCCEEEEEEcCC
Confidence            46788999999999999999999999998653221   234566777776654  4688899999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus        84 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~  137 (323)
T cd05615          84 NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSE  137 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence            99999999998888999999999999999999999       999999998643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=9.1e-19  Score=143.70  Aligned_cols=121  Identities=26%  Similarity=0.377  Sum_probs=107.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.+|.+.+..+++.||+|++.+.....   ...+..|+.++..+.   |+||+++++++.+...+|+||||+
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~   83 (350)
T cd05573           7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD---SPWIVKLYYSFQDEEHLYLVMEYM   83 (350)
T ss_pred             EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC---CCCccchhhheecCCeEEEEEcCC
Confidence            46788999999999999899999999998653222   245677888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        84 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~  137 (350)
T cd05573          84 PGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDAD  137 (350)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC
Confidence            99999999998888999999999999999999999       999999999654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.78  E-value=1.3e-18  Score=141.77  Aligned_cols=121  Identities=24%  Similarity=0.284  Sum_probs=105.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+.+..+++.||+|++.+....   ..+.+.+|+.+++.+.   |+||+++++++.+...+|+||||+
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~---~~~i~~~~~~~~~~~~~~lv~e~~   83 (330)
T cd05601           7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN---SPWIPQLQYAFQDKDNLYLVMEYQ   83 (330)
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC---CCCCcceeeEEecCCeEEEEECCC
Confidence            4678899999999999999999999999865432   1244667777777665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+. +.+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        84 ~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~  138 (330)
T cd05601          84 PGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT  138 (330)
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCC
Confidence            999999999886 67999999999999999999999       999999999654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.78  E-value=2.6e-18  Score=140.07  Aligned_cols=120  Identities=17%  Similarity=0.161  Sum_probs=106.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.+|.+.+..++..+|+|.+...... ....+.+|+++++.++   |+||+++++++.+.+.+|+||||++|
T Consensus        11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~   87 (333)
T cd06650          11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN---SPYIVGFYGAFYSDGEISICMEHMDG   87 (333)
T ss_pred             ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC---CCcccceeEEEEECCEEEEEEecCCC
Confidence            4678899999999999999999999998764222 2245778888888876   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      |+|.+++.+.+.+++..+..++.|++.|+.|||        |+||+|||+..
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~  139 (333)
T cd06650          88 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS  139 (333)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC
Confidence            999999998888999999999999999999998        89999999964

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.78  E-value=2.6e-18  Score=139.73  Aligned_cols=121  Identities=18%  Similarity=0.223  Sum_probs=102.1

Q ss_pred             ccccCC--CCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTS--PPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g--~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      +.+|.|  .++.++++....+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+....|+||||
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN---HPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC---CCCeeeEEEEEEECCEEEEEEec
Confidence            345555  56788999999999999999997643222  245667888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|+|.+++..+  +.+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~  137 (327)
T cd08227          81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD  137 (327)
T ss_pred             cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC
Confidence            9999999999763  45899999999999999999999       999999999643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.78  E-value=2.4e-18  Score=139.87  Aligned_cols=119  Identities=24%  Similarity=0.330  Sum_probs=99.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHH-HHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEIN-ILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~-~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.++.||++.+..+++.||+|++.+......   ..+..|.. .++.+   +|+||+++++++.+.+.+|+||||+
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~---~h~~Iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV---KHPFLVGLHFSFQTADKLYFVLDYI   78 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC---CCCCCCceeEEEEcCCeEEEEEeCC
Confidence            35778899999999989999999999986432211   22333333 23334   5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~  131 (325)
T cd05602          79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS  131 (325)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC
Confidence            99999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.78  E-value=2.8e-18  Score=139.79  Aligned_cols=120  Identities=23%  Similarity=0.312  Sum_probs=103.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++....+++.||+|.+.+.....   ...+..|..++..+.   |+||+++++++.+....|+||||+
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~l~~~~~~~~~~~lv~Ey~   83 (331)
T cd05624           7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD---CQWITTLHYAFQDENYLYLVMDYY   83 (331)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEEEEEeCC
Confidence            46788999999999999999999999997643221   234566777776665   999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+ .+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~  137 (331)
T cd05624          84 VGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM  137 (331)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC
Confidence            99999999987 457999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0660|consensus

Probab=99.78  E-value=4.5e-19  Score=138.37  Aligned_cols=120  Identities=25%  Similarity=0.349  Sum_probs=104.3

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeec--ccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-----CCeEEE
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKES-----DQHVYL  193 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-----~~~~~l  193 (249)
                      ...+|.|++|.|..+....++..||+|++..  +.....+...||+.+++.+.   |+||+.+++.+..     -..+|+
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~---HeNIi~l~di~~p~~~~~f~DvYi  103 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR---HENIIGLLDIFRPPSRDKFNDVYL  103 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc---CCCcceEEeecccccccccceeEE
Confidence            3568999999999999999999999999973  23333467788999998887   9999999999876     456999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|+| +-+|.++|+.+..+++..++.|+.|++.|++|+|       |+||.|+++-.
T Consensus       104 V~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~  160 (359)
T KOG0660|consen  104 VFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA  160 (359)
T ss_pred             ehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc
Confidence            99999 4699999998877999999999999999999999       99999999743

>KOG4721|consensus

Probab=99.78  E-value=7.5e-19  Score=144.62  Aligned_cols=114  Identities=19%  Similarity=0.279  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      .=.|+|+.|.||+...  .++.||||+++.-+       ..++..|+.+.   |+||+.|.+.|.....+|||||||..|
T Consensus       130 eWlGSGaQGAVF~Grl--~netVAVKKV~elk-------ETdIKHLRkLk---H~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRL--HNETVAVKKVRELK-------ETDIKHLRKLK---HPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhccCcccceeeeec--cCceehhHHHhhhh-------hhhHHHHHhcc---CcceeeEeeeecCCceeEEeeeccccc
Confidence            3467888888987753  57899999886432       24677777776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeeccc
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTIS  247 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~~  247 (249)
                      -|..+|+.++.++-.....|.++|+.|+.|||       |+|.+||||+|+-.
T Consensus       198 qL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~  250 (904)
T KOG4721|consen  198 QLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDV  250 (904)
T ss_pred             cHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccce
Confidence            99999999999999999999999999999999       99999999999864

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.78  E-value=3.4e-18  Score=139.27  Aligned_cols=121  Identities=16%  Similarity=0.157  Sum_probs=106.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.+|.+.+..++..+|+|.+...... ....+.+|+.+++.++   ||||+++++++.+.+.+|+||||++|
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~   87 (331)
T cd06649          11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN---SPYIVGFYGAFYSDGEISICMEHMDG   87 (331)
T ss_pred             EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC---CCCCCeEEEEEEECCEEEEEeecCCC
Confidence            4678899999999999999999999998764222 1345778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      |+|.+++.+.+.+++..+..++.|++.|+.|||        |+||+|||+...
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~  140 (331)
T cd06649          88 GSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR  140 (331)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC
Confidence            999999998888999999999999999999998        889999999653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.78  E-value=3.1e-18  Score=141.53  Aligned_cols=119  Identities=22%  Similarity=0.295  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.+|++.+..+++.+|+|.+.+.....   .+.+.+|..+++.+.   ||||+++++.+.+...+|+|||||
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~---hp~iv~~~~~~~~~~~~~lv~Ey~  125 (371)
T cd05622          49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN---SPWVVQLFYAFQDDRYLYMVMEYM  125 (371)
T ss_pred             EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEcCCEEEEEEcCC
Confidence            46788999999999999999999999997643222   234567777777765   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++... .+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       126 ~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~  177 (371)
T cd05622         126 PGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK  177 (371)
T ss_pred             CCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC
Confidence            999999999765 4899999999999999999999       99999999964

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG1989|consensus

Probab=99.77  E-value=1.1e-18  Score=149.77  Aligned_cols=122  Identities=22%  Similarity=0.306  Sum_probs=106.1

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeE-Ee------CCeEEEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCK-ES------DQHVYLVM  195 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~-~~------~~~~~lv~  195 (249)
                      .++.|+|+.||++.....+..||+|++-.......+...+|+++|+.|+  +|+|||.+++.. ..      ..+++|+|
T Consensus        44 vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~--gh~nIV~yidss~~~~~~~~~~~EvllLm  121 (738)
T KOG1989|consen   44 VLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS--GHKNIVSYIDSSAINRSSNNGVWEVLLLM  121 (738)
T ss_pred             EEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc--CCCceeeEeccccccccCCCceeEEEeeh
Confidence            4788999999999998888999999998775555678899999999998  899999999832 11      24699999


Q ss_pred             eccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeecc
Q psy4166         196 EFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYTI  246 (249)
Q Consensus       196 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~~  246 (249)
                      |||.||.|-+++..+  ..|+|.++..|+.+++.|+.+||         |||-|||||+..-
T Consensus       122 EyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g  183 (738)
T KOG1989|consen  122 EYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG  183 (738)
T ss_pred             hhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence            999999999999864  35999999999999999999999         9999999998643

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.77  E-value=4.5e-18  Score=135.71  Aligned_cols=120  Identities=20%  Similarity=0.171  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++....+++.||+|.+.+.....   ...+.+|+.+++.+.   |+||+++++++.+.+..|+||||+
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~---~~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05631           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN---SRFVVSLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC---CCcEEEEEEEEccCCeEEEEEEec
Confidence            45788999999999998999999999997654322   134567888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++...  ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~  137 (285)
T cd05631          83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD  137 (285)
T ss_pred             CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC
Confidence            999999888653  35899999999999999999999       99999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0667|consensus

Probab=99.77  E-value=1.8e-18  Score=144.22  Aligned_cols=121  Identities=23%  Similarity=0.261  Sum_probs=103.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhh---cCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTE---LHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~---~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.||.|..|++..+++.||||+++... .-......|+.+|..+++   -+--|+|+++++|...+++|||.|.+
T Consensus       192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL  270 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL  270 (586)
T ss_pred             EEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence            46899999999999999999999999997542 122445678888887772   22348999999999999999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + .||.++|+.++  .|+...++-|+.||+.||.+||       |+|||||||+.
T Consensus       271 ~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~  324 (586)
T KOG0667|consen  271 S-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD  324 (586)
T ss_pred             h-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence            4 69999999874  4889999999999999999999       99999999985

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.77  E-value=6.1e-18  Score=133.58  Aligned_cols=120  Identities=22%  Similarity=0.285  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+..........+.+|+.+++.++   ||||+++++.+.....+|++|||++++
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~---h~~ii~~~~~~~~~~~~~lv~e~~~~~   91 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK---HSNIVAYFGSYLRRDKLWICMEFCGGG   91 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC---CCCeeeEEEEEEeCCEEEEEEeccCCC
Confidence            45788999999999988899999999987654333345677888887776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+.+++.++..++.|++.|+.|||       |+||+||++..
T Consensus        92 ~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~  141 (267)
T cd06645          92 SLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD  141 (267)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence            99999998888999999999999999999999       89999999964

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.77  E-value=5.7e-18  Score=137.51  Aligned_cols=122  Identities=19%  Similarity=0.224  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|.+.+......   +....|..++..+.  +|++|+++++++.+.+.+|+||||+
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~i~~~~~~~~~~~~~~lv~E~~   83 (323)
T cd05616           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG--KPPFLTQLHSCFQTMDRLYFVMEYV   83 (323)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc--CCCeEeeEEEEEecCCEEEEEEcCC
Confidence            467889999999999988999999999986533221   23455666665543  5899999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~  137 (323)
T cd05616          84 NGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE  137 (323)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC
Confidence            99999999998888999999999999999999999       999999998643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG4250|consensus

Probab=99.77  E-value=7.1e-19  Score=147.75  Aligned_cols=120  Identities=27%  Similarity=0.338  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC------eEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQ------HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~------~~~lv  194 (249)
                      ...|.|++|.||...++.+|+.||+|..+... ....+..-+|+++++.++   |+|||++++.-++..      ...+|
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn---h~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN---HPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC---chhhhhhcccCCccccCcccccceEE
Confidence            35788999999999999999999999988643 223466789999999987   999999999876543      58899


Q ss_pred             EeccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSK---GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||.||+|...+.+-   ..++|.++..++..+..|+.|||       |+||+|||+--
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~  155 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI  155 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence            9999999999999862   34999999999999999999999       99999999853

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.77  E-value=6.4e-18  Score=132.31  Aligned_cols=120  Identities=22%  Similarity=0.293  Sum_probs=103.4

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      .++.|.++.+|.+....+++.+|+|.+......+ ...+.+|+.+++.++   |+||+++++++.....+|+||||++++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS---HPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            3577888999999888899999999876433222 345788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.+ .+++.++..++.|++.|+.|||       |+||+||++..+
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~  130 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEK  130 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCC
Confidence            9999998754 5899999999999999999999       999999999754

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.77  E-value=7.2e-18  Score=134.75  Aligned_cols=120  Identities=25%  Similarity=0.312  Sum_probs=103.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.||.+.+..++..||+|.+....... ...+.+|+.+++.++   ||||+++++++.+....|+||||+++
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~   87 (288)
T cd07871          11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK---HANIVTLHDIIHTERCLTLVFEYLDS   87 (288)
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC---CCCEeeEEEEEcCCCeEEEEEeCCCc
Confidence            46788999999999999999999999987543222 245678888888776   99999999999999999999999974


Q ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       +|.+++...+ .+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        88 -~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~  139 (288)
T cd07871          88 -DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK  139 (288)
T ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence             9999997654 4789999999999999999999       999999999654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.76  E-value=8.3e-18  Score=133.66  Aligned_cols=119  Identities=24%  Similarity=0.249  Sum_probs=101.1

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      +|.|.++.+|.+....+++.||+|++.......   ......|+.+++.++   ||||+++++++.+..++|+||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~i~~~~~~~~~~~~~~lv~e~~~g   77 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN---SPFIVNLAYAFESKTHLCLVMSLMNG   77 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC---CCcEEEEEEEEecCCeEEEEEecCCC
Confidence            367888999999998899999999997543322   233456888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++...+  .+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~  131 (277)
T cd05607          78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ  131 (277)
T ss_pred             CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC
Confidence            99999886543  4888999999999999999999       999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0658|consensus

Probab=99.76  E-value=5e-19  Score=138.37  Aligned_cols=116  Identities=19%  Similarity=0.260  Sum_probs=99.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----eEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ-----HVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----~~~lv~e  196 (249)
                      ...|.|+||.||.+.-..++..||||++..+.    +--.+|.++|+.+.   |||||+|..+|....     +..+|||
T Consensus        30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~---HpNIV~L~~~f~~~~~~d~~~lnlVle  102 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLD---HPNIVRLLYFFSSSTESDEVYLNLVLE  102 (364)
T ss_pred             EEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcC---CcCeeeEEEEEEecCCCchhHHHHHHH
Confidence            56899999999999988889999999987553    33468999999777   999999999886522     4678999


Q ss_pred             ccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+ .+|.++++.    +..++.-.++.|+.|+.+|+.|||       |+||.|||+=..
T Consensus       103 ymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~  161 (364)
T KOG0658|consen  103 YMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD  161 (364)
T ss_pred             hch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC
Confidence            996 599999985    456999999999999999999999       999999998543

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.76  E-value=5.7e-18  Score=138.05  Aligned_cols=120  Identities=23%  Similarity=0.325  Sum_probs=103.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+....+++.+|+|.+.+.....   ...+..|+.++..+.   |+||+++++++.+...+|+||||+
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~ey~   83 (332)
T cd05623           7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD---NQWITTLHYAFQDENNLYLVMDYY   83 (332)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC---CCCEeeEEEEEecCCEEEEEEecc
Confidence            56788999999999998899999999997543221   234667777777665   999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+ .+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~  137 (332)
T cd05623          84 VGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM  137 (332)
T ss_pred             CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence            99999999987 356899999999999999999999       99999999964

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG4236|consensus

Probab=99.76  E-value=4.1e-18  Score=139.27  Aligned_cols=119  Identities=24%  Similarity=0.367  Sum_probs=104.8

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccch--hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..|+|.||.||-+.++.+|+.||||.+.+-++..+  .....|+.|+..+.   ||.||+|.-.|++.+.+++|||-+. 
T Consensus       571 vLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~---HPGiV~le~M~ET~ervFVVMEKl~-  646 (888)
T KOG4236|consen  571 VLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH---HPGIVNLECMFETPERVFVVMEKLH-  646 (888)
T ss_pred             hccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC---CCCeeEEEEeecCCceEEEEehhhc-
Confidence            47889999999999999999999999998765543  45789999999887   9999999999999999999999995 


Q ss_pred             CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVS--KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |++.+.|-.  .|+++|..-++.+.||+.||.|||       |+||||+|+...
T Consensus       647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~  700 (888)
T KOG4236|consen  647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA  700 (888)
T ss_pred             chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC
Confidence            566666543  467999999999999999999999       999999998643

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.76  E-value=5.6e-18  Score=138.08  Aligned_cols=121  Identities=18%  Similarity=0.271  Sum_probs=103.3

Q ss_pred             ccccCCCCcceeeccC---CCCCCeeEEEEeecccccc----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNLAK----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~~~----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.+|.||++..   ..+++.||+|++.+.....    .+.+..|+.+++.+.  +|+||+++++++.....+|+|
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv   83 (332)
T cd05614           6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR--QSPFLVTLHYAFQTEAKLHLI   83 (332)
T ss_pred             EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc--CCCCcccEEEEEecCCEEEEE
Confidence            4678899999997764   3578999999997643222    234667888887764  599999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~  140 (332)
T cd05614          84 LDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS  140 (332)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC
Confidence            999999999999988888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.76  E-value=1e-17  Score=132.32  Aligned_cols=120  Identities=23%  Similarity=0.259  Sum_probs=105.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....+++.||+|++..........+.+|+.+++.++   |+||+++++++.....+|+||||+++|
T Consensus        15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~---h~~ii~~~~~~~~~~~~~iv~e~~~~~   91 (267)
T cd06646          15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK---HCNIVAYFGSYLSREKLWICMEYCGGG   91 (267)
T ss_pred             heeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcC---CCCeeeeeEEEEeCCEEEEEEeCCCCC
Confidence            45788999999999988899999999987544333345677888887776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        92 ~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~  141 (267)
T cd06646          92 SLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD  141 (267)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence            99999988888999999999999999999999       89999999964

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0197|consensus

Probab=99.76  E-value=7.7e-18  Score=137.53  Aligned_cols=173  Identities=21%  Similarity=0.239  Sum_probs=126.0

Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccCCc---cccccCCCCcce
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNS---ADVVSTSPPRPS  132 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~  132 (249)
                      ....+.+..|..+.+.++++....+..|--....          ..|......  ...+...+..   ...+|.|-||.|
T Consensus       155 ~~~F~~l~~lv~~~~~~~~gl~~~l~~p~~~~~~----------~~p~~~~~~--~d~wei~r~~l~l~~~LG~G~FG~V  222 (468)
T KOG0197|consen  155 RELFSSLQQLVNYYSKNADGLCTRLRDPCSKQGH----------TKPQTPDLA--RDPWEIPREELKLIRELGSGQFGEV  222 (468)
T ss_pred             HHhhhhHHHHHhhhhccCcchhhcccCchhccCC----------CCCCCCccc--cCCeeecHHHHHHHHHhcCCccceE
Confidence            3455667788888888888766655543322111          000000000  1112222222   135799999999


Q ss_pred             eeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHHHHh--c
Q psy4166         133 SLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--K  210 (249)
Q Consensus       133 ~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~  210 (249)
                      +.+.-. ....||+|.+...... .+.|.+|+++|+.++   |+|||++++++...+.+|||||||+.|+|.++|+.  +
T Consensus       223 ~~g~~~-~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~---H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~  297 (468)
T KOG0197|consen  223 WLGKWN-GSTKVAVKTIKEGSMS-PEAFLREAQIMKKLR---HEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREG  297 (468)
T ss_pred             EEEEEc-CCCcccceEEeccccC-hhHHHHHHHHHHhCc---ccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCC
Confidence            988642 3447999999764332 377889999999998   99999999999998899999999999999999997  3


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         211 GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       211 ~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +.+...+...|+.|||.||+||+       |+---|||+...
T Consensus       298 ~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~  339 (468)
T KOG0197|consen  298 GLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDED  339 (468)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccC
Confidence            46899999999999999999987       999999998754

>KOG0598|consensus

Probab=99.76  E-value=1.6e-18  Score=135.78  Aligned_cols=93  Identities=31%  Similarity=0.523  Sum_probs=78.6

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC----CH
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI----SF   76 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~----~~   76 (249)
                      ++.+|+.+|||||+||++|||++|.+||.+.+.....+.+.+...  +..|..++.+++++++++|.+||.+|.    ++
T Consensus       198 ~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~--~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~  275 (357)
T KOG0598|consen  198 LGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL--PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDA  275 (357)
T ss_pred             hcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC--CCCCccCCHHHHHHHHHHhccCHHHhcCCCCCh
Confidence            467999999999999999999999999999988777666655442  233555899999999999999999997    58


Q ss_pred             HHHhcCCCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPLIP   95 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~~~   95 (249)
                      .+|..||||..++|+....
T Consensus       276 ~~ik~HpfF~~inW~~l~~  294 (357)
T KOG0598|consen  276 EEIKRHPFFKGINWEKLLA  294 (357)
T ss_pred             HHhhcCcccccCCHHHHHh
Confidence            8999999999999886543

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.76  E-value=7.8e-18  Score=133.60  Aligned_cols=101  Identities=13%  Similarity=0.128  Sum_probs=85.1

Q ss_pred             CCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHHHHh-cCCCCHHHHH
Q psy4166         141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIR  219 (249)
Q Consensus       141 ~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~  219 (249)
                      ...||+|.+..........+.+|+.+++.++   ||||+++++++.+....|+||||+++|+|.+++.+ .+.+++..+.
T Consensus        44 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~---h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~  120 (274)
T cd05076          44 ELRVVLKVLDPSHRDIALAFFETASLMSQVS---HIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKI  120 (274)
T ss_pred             eeeEEEEecChHHHHHHHHHHHHHHHHhcCC---CCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHH
Confidence            3468899887544333345667777777665   99999999999999999999999999999999976 4568999999


Q ss_pred             HHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         220 IFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       220 ~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .++.|++.|+.|||       |+||.|||+..
T Consensus       121 ~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~  152 (274)
T cd05076         121 TVAQQLASALSYLEDKNLVHGNVCAKNILLAR  152 (274)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCCCcccEEEec
Confidence            99999999999999       99999999853

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.76  E-value=5.1e-18  Score=135.47  Aligned_cols=121  Identities=20%  Similarity=0.249  Sum_probs=103.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+.+..+++.||+|++.......  .+.+.+|+.+++.++   |+||+++++++...+.+|+||||++
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~   83 (287)
T cd07848           7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK---QENIVELKEAFRRRGKLYLVFEYVE   83 (287)
T ss_pred             EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC---CccccchhhhEecCCEEEEEEecCC
Confidence            45688899999999999999999999997643222  245678888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++.+..+....+.+++..++.++.|++.|+.|||       |+||+||++...
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~  136 (287)
T cd07848          84 KNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN  136 (287)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            8777666555556999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.76  E-value=1e-17  Score=135.13  Aligned_cols=120  Identities=18%  Similarity=0.195  Sum_probs=105.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|++.+..++..+|+|.+...... ....+.+|+++++.++   ||||+++++++.+.+.+|+||||++|
T Consensus         7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~ey~~~   83 (308)
T cd06615           7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN---SPYIVGFYGAFYSDGEISICMEHMDG   83 (308)
T ss_pred             eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEeeCCEEEEEeeccCC
Confidence            4568889999999998889999999998654222 1245678888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      |+|.+++.+.+.+++..+..++.|++.|+.|||        |+||.|||+..
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~  135 (308)
T cd06615          84 GSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS  135 (308)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec
Confidence            999999998888999999999999999999999        78999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.76  E-value=1.8e-17  Score=131.82  Aligned_cols=121  Identities=17%  Similarity=0.165  Sum_probs=102.2

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      +|.|.++.+|.+....+++.+|+|.+.+......   ....+|..+++.+...+|+||+.+++.+...+..|+||||++|
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG   81 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence            4678899999999888999999999976533221   2344555555555545699999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++..++.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        82 ~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~  132 (279)
T cd05633          82 GDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE  132 (279)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC
Confidence            999999998888999999999999999999999       99999999954

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0033|consensus

Probab=99.76  E-value=2.8e-18  Score=127.70  Aligned_cols=85  Identities=21%  Similarity=0.352  Sum_probs=74.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .+|+.++||||.||+||-++.|++||.+.+...+.+.+..+.. .+++.+..+++++++|+++||..||.+|+|+.+.++
T Consensus       187 dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  187 DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            5899999999999999999999999999888777666554443 344467789999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      |||+.+
T Consensus       267 HpWi~~  272 (355)
T KOG0033|consen  267 HPWICN  272 (355)
T ss_pred             Cchhcc
Confidence            999984

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.76  E-value=7.3e-18  Score=133.17  Aligned_cols=121  Identities=17%  Similarity=0.173  Sum_probs=101.1

Q ss_pred             ccccCCCCcceeeccCC---CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSP---APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+...   ..+..||+|.+....... ...+.+|+..++.++   ||||+++++++......|+||||
T Consensus        11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~   87 (266)
T cd05064          11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD---HSNIVRLEGVITRGNTMMIVTEY   87 (266)
T ss_pred             eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC---CCCcCeEEEEEecCCCcEEEEEe
Confidence            35788999999887543   456789999987643222 245678888887766   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|+|.+++.+. +.+++..+..++.|++.|+.|||       |+||+||+|..+
T Consensus        88 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~  143 (266)
T cd05064          88 MSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSD  143 (266)
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCC
Confidence            9999999999874 46899999999999999999999       899999999653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.76  E-value=1e-17  Score=147.82  Aligned_cols=120  Identities=23%  Similarity=0.287  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.||++....+++.||+|++.......   ...+..|+.++..+.   |+||++++.++....++|+||||+
T Consensus        10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~---hp~Iv~~~~~~~~~~~~~lVmEy~   86 (669)
T cd05610          10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK---SPFIVHLYYSLQSANNVYLVMEYL   86 (669)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC---CCCcCeEEEEEEECCEEEEEEeCC
Confidence            46788999999999999899999999997654322   245677778877766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .||+|.+++...+.+++..++.++.|++.||.|||       |+||+||||..
T Consensus        87 ~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~  139 (669)
T cd05610          87 IGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN  139 (669)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC
Confidence            99999999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0592|consensus

Probab=99.75  E-value=6e-18  Score=138.36  Aligned_cols=89  Identities=28%  Similarity=0.447  Sum_probs=76.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..-++.+|+|+||||+|+|+.|.+||.+.++.-+.+.+...   ...+|..+++.+++||+++|..||.+|++.++|.+|
T Consensus       262 ~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l---~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  262 SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL---DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence            34567899999999999999999999999887665544433   345577889999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC
Q psy4166          83 PFLQPLAPHPLI   94 (249)
Q Consensus        83 ~~~~~~~~~~~~   94 (249)
                      |||..++|+++-
T Consensus       339 pFF~~Vdw~nlw  350 (604)
T KOG0592|consen  339 PFFEGVDWENLW  350 (604)
T ss_pred             cccccCChhhhh
Confidence            999999998753

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.75  E-value=2e-17  Score=131.49  Aligned_cols=121  Identities=17%  Similarity=0.155  Sum_probs=102.6

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ++.|.++.+|.+.+..+++.||+|.+.+......   .....|..+++.+...+||||+++++++.+...+|+||||++|
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g   81 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG   81 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence            4678889999998888999999999986543221   2244555555555555799999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        82 ~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~  132 (278)
T cd05606          82 GDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE  132 (278)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC
Confidence            999999988888999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.4e-17  Score=132.87  Aligned_cols=121  Identities=21%  Similarity=0.194  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.+|.+|.+....+++.||+|.+.......   ...+.+|+.+++.++   |+||+++++++.+....|+||||+
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05605           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN---SRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC---CCCEeeeeeeecCCCeEEEEEecc
Confidence            45788999999999988899999999997643322   134567888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...  +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~  138 (285)
T cd05605          83 NGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDY  138 (285)
T ss_pred             CCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCC
Confidence            999999988754  35899999999999999999999       999999999653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.75  E-value=1.1e-17  Score=134.71  Aligned_cols=120  Identities=24%  Similarity=0.306  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.||.+....+++.||+|.+....... ...+.+|+.+++.+.   ||||+++++++.+....|+||||+. 
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~-   86 (303)
T cd07869          11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK---HANIVLLHDIIHTKETLTLVFEYVH-   86 (303)
T ss_pred             eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC---CCCcCeEEEEEecCCeEEEEEECCC-
Confidence            46788999999999998899999999997543322 234678888888776   9999999999999999999999995 


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|.+++.+. +.+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~  139 (303)
T cd07869          87 TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT  139 (303)
T ss_pred             cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence            6888888764 46899999999999999999999       999999999653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA02988 hypothetical protein; Provisional

Probab=99.75  E-value=1.3e-17  Score=132.92  Aligned_cols=118  Identities=16%  Similarity=0.158  Sum_probs=99.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVM  195 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~  195 (249)
                      .++.|..+.+|.+..  +++.||+|.+.......   .+.+.+|+.+++.++   ||||+++++++.+    ...+++||
T Consensus        27 ~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~g~~~~~~~~~~~~~lv~  101 (283)
T PHA02988         27 LIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID---SNNILKIYGFIIDIVDDLPRLSLIL  101 (283)
T ss_pred             EEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC---CCCEEEEeeeEEecccCCCceEEEE
Confidence            456677788888765  68899999997653332   245668888888877   9999999999876    45799999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      ||++||+|.+++.+++.+++.....++.+++.|+.|||        |+||+|||+...
T Consensus       102 Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~  159 (283)
T PHA02988        102 EYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN  159 (283)
T ss_pred             EeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCC
Confidence            99999999999998888999999999999999999999        799999998753

>KOG0694|consensus

Probab=99.75  E-value=1.9e-18  Score=144.73  Aligned_cols=92  Identities=21%  Similarity=0.411  Sum_probs=80.8

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----   75 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----   75 (249)
                      .++.|+.+||||||||+||||+.|++||.|++.+++-..+....   +.+|..+|.++.++++++|.+||++|.+     
T Consensus       541 ~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~---~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d  617 (694)
T KOG0694|consen  541 TEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE---VRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERD  617 (694)
T ss_pred             ccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC---CCCCCcccHHHHHHHHHHhccCcccccCCCCCC
Confidence            36789999999999999999999999999999999877665443   4457779999999999999999999996     


Q ss_pred             HHHHhcCCCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPLIP   95 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~~~   95 (249)
                      +++|..||||+.++|..+..
T Consensus       618 ~~~i~~hpFFr~i~w~~L~~  637 (694)
T KOG0694|consen  618 AEDIKKHPFFRSIDWDDLLN  637 (694)
T ss_pred             chhhhhCCccccCCHHHHhh
Confidence            58899999999999886543

>KOG0690|consensus

Probab=99.75  E-value=4.1e-19  Score=137.23  Aligned_cols=120  Identities=22%  Similarity=0.231  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhc---HHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQN---FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+.|.|.+|.|.++..+++++.||+|++++.....+..   ...|-++++...   ||.+..|...|+..+++|+||||.
T Consensus       174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~---HPFLt~LKYsFQt~drlCFVMeya  250 (516)
T KOG0690|consen  174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR---HPFLTSLKYSFQTQDRLCFVMEYA  250 (516)
T ss_pred             HHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc---CcHHHHhhhhhccCceEEEEEEEc
Confidence            45789999999999999999999999999876555433   456667777666   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .||+|+..+.+++.|+|..++.|-.+|+.||.|||       |+|.||+|+-.
T Consensus       251 nGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk  303 (516)
T KOG0690|consen  251 NGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK  303 (516)
T ss_pred             cCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc
Confidence            99999999999999999999999999999999999       99999999854

>KOG1035|consensus

Probab=99.75  E-value=6.2e-18  Score=149.38  Aligned_cols=221  Identities=19%  Similarity=0.225  Sum_probs=151.9

Q ss_pred             chhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166           8 KADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus         8 ~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      ..|+|.+|..+..+..|..+-. ..     .....      -.+........++..+|+..++++|+++.+++.|+|...
T Consensus       372 ~~dL~~lgll~~~~~~~~~i~~-~~-----~~~~~------~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  372 LTDLWCLGLLLLQLSQGEDISE-KS-----AVPVS------LLDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             hhHHHHHHHHHhhhhhcCcccc-cc-----cchhh------hhccccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence            3699999999999888754321 00     00000      011112226778889999999999999999999999874


Q ss_pred             CCCCCCCCCCC---CCCC--c------ccCCCCCCCCccccCCccccccCCCCcceeeccCCCCCCeeEEEEeecccc-c
Q psy4166          88 LAPHPLIPEPH---AGSP--V------TLSPEDSTDDFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-A  155 (249)
Q Consensus        88 ~~~~~~~~~~~---~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-~  155 (249)
                      ...........   ...+  .      .......++.|...+.++...|.|+||.|+++.++-+|+.||||+++.... .
T Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~s~~~r~~SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~  519 (1351)
T KOG1035|consen  440 PTDNESSEFAPNDETSVPQFRLRFSGAMSPLQRQFSRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDK  519 (1351)
T ss_pred             ccccccccccCccccccCccCCCCccccCccccchhhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHH
Confidence            33322211100   0000  0      000011112344444455678999999999999999999999999987641 1


Q ss_pred             chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------------------------------------------------
Q psy4166         156 KTQNFGKEINILKELTELHHENVVELLHCKES------------------------------------------------  187 (249)
Q Consensus       156 ~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------------------------------------------------  187 (249)
                      ...++.+|+..+..+.   |||||++|..|..                                                
T Consensus       520 ~~skI~rEVk~LArLn---HpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~  596 (1351)
T KOG1035|consen  520 LYSKILREVKLLARLN---HPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSE  596 (1351)
T ss_pred             HHHHHHHHHHHHhhcC---CcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhcc
Confidence            2256778888888776   9999999975411                                                


Q ss_pred             ---------------------------------------------------------------C--------CeEEEEEe
Q psy4166         188 ---------------------------------------------------------------D--------QHVYLVME  196 (249)
Q Consensus       188 ---------------------------------------------------------------~--------~~~~lv~e  196 (249)
                                                                                     .        ..+||=||
T Consensus       597 ~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQME  676 (1351)
T KOG1035|consen  597 DEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQME  676 (1351)
T ss_pred             ccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHh
Confidence                                                                           0        24899999


Q ss_pred             ccCCCCHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         197 FCNGGDLADYLVSKGTL-SEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||+.-.|.++++++... .-..++.++++|+.|+.|+|       |+||-||.+-
T Consensus       677 yCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd  731 (1351)
T KOG1035|consen  677 YCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD  731 (1351)
T ss_pred             hhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEc
Confidence            99987777777766533 25778999999999999999       9999999986

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.75  E-value=1.1e-17  Score=138.47  Aligned_cols=121  Identities=17%  Similarity=0.248  Sum_probs=100.6

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.     ...++..||+|++...... ..+.+.+|+.++..+.  +||||+++++++.+....|+||
T Consensus        41 ~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~--~HpnIv~l~~~~~~~~~~~lv~  118 (375)
T cd05104          41 KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHINIVNLLGACTVGGPTLVIT  118 (375)
T ss_pred             heecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc--CCcceeeeeeeeccCCcceeee
Confidence            467889999998774     3456778999998754322 2356788999998883  4999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------------------------------------------------------------
Q psy4166         196 EFCNGGDLADYLVSKG----------------------------------------------------------------  211 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------------------------------------------------------------  211 (249)
                      |||+||+|.+++++.+                                                                
T Consensus       119 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (375)
T cd05104         119 EYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQD  198 (375)
T ss_pred             hhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccc
Confidence            9999999999997532                                                                


Q ss_pred             -----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         212 -----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       212 -----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                                 .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       199 ~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~  249 (375)
T cd05104         199 VTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH  249 (375)
T ss_pred             cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC
Confidence                       3677888999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.75  E-value=1.9e-17  Score=133.40  Aligned_cols=121  Identities=28%  Similarity=0.398  Sum_probs=105.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|++.+..+++.||+|.+.......   ...+.+|+.+++.+.   ||||+++++.+....++|+||||+
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~   83 (305)
T cd05609           7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE---NPFVVSMFCSFETKRHLCMVMEYV   83 (305)
T ss_pred             eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC---CCCeeeeEEEEecCCEEEEEEecC
Confidence            45678889999999999999999999987653221   245667888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~  137 (305)
T cd05609          84 EGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM  137 (305)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCC
Confidence            99999999998888999999999999999999999       999999999653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2e-17  Score=131.53  Aligned_cols=121  Identities=21%  Similarity=0.311  Sum_probs=105.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..+|+|.+........+.+.+|+.+++.++   |+||+++++.+.+....|+||||+++|
T Consensus        11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (280)
T cd06611          11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK---HPNIVGLYEAYFYENKLWILIEFCDGG   87 (280)
T ss_pred             HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC---CCceeEEEEEEecCCeEEEEeeccCCC
Confidence            45678889999999888889999999987554333456778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+. +.+++..+..++.|++.|+.|||       |++|+||++..+
T Consensus        88 ~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~  139 (280)
T cd06611          88 ALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD  139 (280)
T ss_pred             cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCC
Confidence            999999874 46999999999999999999999       999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0616|consensus

Probab=99.75  E-value=3.9e-18  Score=130.00  Aligned_cols=92  Identities=24%  Similarity=0.455  Sum_probs=78.4

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----C
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----S   75 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~   75 (249)
                      ++++|+.++|||||||++|||+.|.+||.+.++..+...+...   ...+|..+++++++|++++|+.|-.+|.     +
T Consensus       214 ~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~---~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG  290 (355)
T KOG0616|consen  214 QSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG---KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNG  290 (355)
T ss_pred             hcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC---cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCC
Confidence            3689999999999999999999999999999886665555443   3355777999999999999999999995     4


Q ss_pred             HHHHhcCCCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPLIP   95 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~~~   95 (249)
                      ..+|..|+||..+.|..+..
T Consensus       291 ~~dIk~H~wF~~v~W~~i~~  310 (355)
T KOG0616|consen  291 VEDIKNHPWFKGVDWEAILQ  310 (355)
T ss_pred             ccccccCcccccccHHHHhh
Confidence            78999999999999887543

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.75  E-value=2.4e-17  Score=131.83  Aligned_cols=121  Identities=24%  Similarity=0.378  Sum_probs=106.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.+|+|.+.......   ...+.+|+.+++.+.   ||||+++++++.+...+|+||||+
T Consensus         7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~   83 (290)
T cd05580           7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR---HPFLVNLYGSFQDDSNLYLVMEYV   83 (290)
T ss_pred             EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC---CCCccceeeEEEcCCeEEEEEecC
Confidence            45678889999999988899999999997653322   245677888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++.+.+.+++..+..++.|++.|+.|||       |++|.||++...
T Consensus        84 ~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~  137 (290)
T cd05580          84 PGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSD  137 (290)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC
Confidence            99999999998888999999999999999999999       999999999643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.74  E-value=1.5e-17  Score=135.83  Aligned_cols=121  Identities=19%  Similarity=0.291  Sum_probs=97.6

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv  194 (249)
                      ..+|.|.+|.||.+..     ..++..||+|.+...... ..+.+.+|+.++..+.  +||||+++++.+.. ...+|+|
T Consensus        13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~~lv   90 (338)
T cd05102          13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG--NHLNVVNLLGACTKPNGPLMVI   90 (338)
T ss_pred             eEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc--cCcceeeEEeEecCCCCceEEE
Confidence            4578899999998853     345678999998754322 2345788999888873  49999999998775 4468999


Q ss_pred             EeccCCCCHHHHHHhcC--------------------------------------------------------------C
Q psy4166         195 MEFCNGGDLADYLVSKG--------------------------------------------------------------T  212 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~--------------------------------------------------------------~  212 (249)
                      |||+++|+|.+++...+                                                              .
T Consensus        91 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (338)
T cd05102          91 VEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSP  170 (338)
T ss_pred             EecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCC
Confidence            99999999999997532                                                              3


Q ss_pred             CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         213 LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       213 ~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~  209 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE  209 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC
Confidence            677888999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.74  E-value=2.3e-17  Score=137.30  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=69.5

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+...     .++..||+|++...... ..+.+.+|+.+++.+.  .||||+++++++.+...+|+||
T Consensus        43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~--~HpnIv~l~~~~~~~~~~~lv~  120 (400)
T cd05105          43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG--PHLNIVNLLGACTKSGPIYIIT  120 (400)
T ss_pred             heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC--CCCCeeeEEEEEccCCceEEEE
Confidence            45788999999987643     33457999999754322 2356788999888774  4999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc
Q psy4166         196 EFCNGGDLADYLVSK  210 (249)
Q Consensus       196 e~~~~g~L~~~l~~~  210 (249)
                      |||++|+|.+++.++
T Consensus       121 Ey~~~g~L~~~l~~~  135 (400)
T cd05105         121 EYCFYGDLVNYLHKN  135 (400)
T ss_pred             EecCCCcHHHHHHHh
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=1.7e-17  Score=137.90  Aligned_cols=113  Identities=18%  Similarity=0.214  Sum_probs=101.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.+|.+|.+.+..+++.||+|....      ..+.+|+.+++.++   ||||++++++|......|+|||++. +
T Consensus        98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~lv~e~~~-~  167 (391)
T PHA03212         98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAIN---HPSIIQLKGTFTYNKFTCLILPRYK-T  167 (391)
T ss_pred             EEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCC---CCCCCCEeEEEEECCeeEEEEecCC-C
Confidence            467889999999999999999999997542      34678999998887   9999999999999999999999994 7


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+.+++.+++.++.|++.||.|||       |+||+|||+..
T Consensus       168 ~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~  217 (391)
T PHA03212        168 DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH  217 (391)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC
Confidence            99999988878999999999999999999999       99999999954

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.74  E-value=2.7e-17  Score=132.39  Aligned_cols=120  Identities=18%  Similarity=0.238  Sum_probs=98.5

Q ss_pred             ccccCCCCcceeeccCC----------------CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEe
Q psy4166         122 DVVSTSPPRPSSLLLSP----------------APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHC  184 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~----------------~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~  184 (249)
                      ..+|.|.+|.||++...                ..+..||+|.+....... ...+.+|+.++..++   ||||++++++
T Consensus        11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~   87 (304)
T cd05096          11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK---DPNIIRLLGV   87 (304)
T ss_pred             eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC---CCCeeEEEEE
Confidence            45788999999987532                234579999987543222 345778988888776   9999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCcc
Q psy4166         185 KESDQHVYLVMEFCNGGDLADYLVSKG-------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPW  238 (249)
Q Consensus       185 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~  238 (249)
                      +.+....|+||||+++|+|.+++....                   .+++..+..++.|++.|+.|||       |+||+
T Consensus        88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~  167 (304)
T cd05096          88 CVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATR  167 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchh
Confidence            999999999999999999999997642                   2567788999999999999999       99999


Q ss_pred             ceeeee
Q psy4166         239 SFVILY  244 (249)
Q Consensus       239 nili~~  244 (249)
                      |||+..
T Consensus       168 Nill~~  173 (304)
T cd05096         168 NCLVGE  173 (304)
T ss_pred             heEEcC
Confidence            999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.74  E-value=4.4e-17  Score=129.42  Aligned_cols=118  Identities=23%  Similarity=0.223  Sum_probs=102.1

Q ss_pred             cCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         125 STSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       125 ~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      +.|.++.+|.+....+++.||+|.+.......   .+.+..|+.+++.+.   ||||+++++.+...+..|+||||++|+
T Consensus         2 g~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           2 GKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS---SRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC---CCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            56788999999888899999999997643222   234567888887776   999999999999999999999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.+  .+++.++..++.|++.|+.|||       |++|.||++..+
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~  131 (277)
T cd05577          79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH  131 (277)
T ss_pred             cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence            9999998765  6999999999999999999999       999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0581|consensus

Probab=99.74  E-value=3.9e-18  Score=133.67  Aligned_cols=87  Identities=24%  Similarity=0.425  Sum_probs=72.8

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcccCCCCCCCC-CCHHHHHHHHHhhhhCcccCC
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIAN-----SPPQLKQYYEKNLVLVPKVPVG-TSAELKELLLGLLKRNAMDRI   74 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~R~   74 (249)
                      .|..|+.++||||||+.++||++|+.||...     +..++...+.  ..++|..|.. +|+++++||..||++||.+|+
T Consensus       250 ~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv--~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~  327 (364)
T KOG0581|consen  250 SGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV--DEPPPRLPEGEFSPEFRSFVSCCLRKDPSERP  327 (364)
T ss_pred             cCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh--cCCCCCCCcccCCHHHHHHHHHHhcCCcccCC
Confidence            4778999999999999999999999999874     3334443333  3456677776 999999999999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q psy4166          75 SFEQLFAHPFLQPLA   89 (249)
Q Consensus        75 ~~~~i~~~~~~~~~~   89 (249)
                      ++.++++|||+....
T Consensus       328 s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  328 SAKQLLQHPFIKKFE  342 (364)
T ss_pred             CHHHHhcCHHHhhcc
Confidence            999999999998543

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.74  E-value=2.5e-17  Score=134.51  Aligned_cols=119  Identities=22%  Similarity=0.346  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv  194 (249)
                      ..++.|.++.+|.+.+..++..||+|++.....  .....+.+|+.+++.++   ||||+++++++...     ..+|+|
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~~~~~~lv   82 (338)
T cd07859           6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR---HPDIVEIKHIMLPPSRREFKDIYVV   82 (338)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC---CCCEeeecceEeccCCCCCceEEEE
Confidence            457888999999999999999999999875322  22245678888888776   99999999987543     358999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||. ++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        83 ~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~  138 (338)
T cd07859          83 FELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA  138 (338)
T ss_pred             EecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC
Confidence            99995 799999998888999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0612|consensus

Probab=99.74  E-value=1.2e-18  Score=152.85  Aligned_cols=126  Identities=25%  Similarity=0.321  Sum_probs=108.1

Q ss_pred             CCccccCCccccccCCCCcceeeccCCCCCCeeEEEEeeccc---ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC
Q psy4166         112 DDFVVIPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN---LAKTQNFGKEINILKELTELHHENVVELLHCKESD  188 (249)
Q Consensus       112 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~  188 (249)
                      .+|..+    .++|.|+||.|.++.++.+++.||+|++++-.   ..+...|..|-.+|-...   .+=|++|+..|++.
T Consensus        75 ~Dfeil----KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n---s~Wiv~LhyAFQD~  147 (1317)
T KOG0612|consen   75 EDFEIL----KVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN---SEWIVQLHYAFQDE  147 (1317)
T ss_pred             HhhHHH----HHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC---cHHHHHHHHHhcCc
Confidence            345544    57899999999999999999999999998743   233345667777776544   77799999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         189 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       189 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .++|+|||||+||+|..++.+.++++|..|++|+..+..|+.-+|       |+||+||||--
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~  210 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK  210 (1317)
T ss_pred             cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc
Confidence            999999999999999999999889999999999999999997666       99999999853

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.74  E-value=2.3e-17  Score=136.52  Aligned_cols=121  Identities=20%  Similarity=0.261  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+...     .+...||+|.+......+ ...+.+|+.+++.+.  +|+|||++++++.....+|+||
T Consensus        44 ~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~--~h~nIv~~~~~~~~~~~~~lv~  121 (374)
T cd05106          44 KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG--QHKNIVNLLGACTHGGPVLVIT  121 (374)
T ss_pred             heecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc--cCCceeeEeeEecCCCCeEEeH
Confidence            45788999999987642     344679999997543222 345778999998873  3999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------------------------------------------------------------
Q psy4166         196 EFCNGGDLADYLVSKG----------------------------------------------------------------  211 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------------------------------------------------------------  211 (249)
                      |||++|+|.+++.++.                                                                
T Consensus       122 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (374)
T cd05106         122 EYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEE  201 (374)
T ss_pred             hhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchh
Confidence            9999999999996531                                                                


Q ss_pred             ------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         212 ------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       212 ------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                            .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       202 ~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~  247 (374)
T cd05106         202 DTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD  247 (374)
T ss_pred             ccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC
Confidence                  3678889999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0194|consensus

Probab=99.74  E-value=1.4e-17  Score=137.64  Aligned_cols=121  Identities=23%  Similarity=0.269  Sum_probs=102.9

Q ss_pred             ccccCCCCcceeeccCCCCC---Ce-eEEEEeeccc---ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS---QH-VAIKRITKKN---LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~---~~-vavK~~~~~~---~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.||.|+.+.-...+   .. ||+|....+.   ......+.+|.++++.++   |||||++||+....+.+|||
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~---H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN---HPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC---CCCEEEEEEEEcCCCccEEE
Confidence            56899999999877654321   23 8999987522   223467889999999887   99999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|+||+|.++|++.+ .++..+...|+.+++.||.|||       |+--.|+|++.+
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~  298 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKK  298 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCC
Confidence            99999999999999986 4999999999999999999999       888899998863

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.73  E-value=2.7e-17  Score=129.86  Aligned_cols=119  Identities=20%  Similarity=0.288  Sum_probs=104.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+....+++.+|+|.+......      ..+.+.+|+..++.++   |+||+++++++.+.+.+++||
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~v~   82 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN---HPHIIRMLGATCEDSHFNLFV   82 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC---CCceehhhceeccCCeEEEEE
Confidence            4568889999999988889999999998754321      1245677888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||++|++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++.
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~  137 (268)
T cd06630          83 EWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID  137 (268)
T ss_pred             eccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence            99999999999998888999999999999999999999       9999999994

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.73  E-value=2.1e-17  Score=129.86  Aligned_cols=120  Identities=29%  Similarity=0.433  Sum_probs=106.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchh--cHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.+|++.+..+++.||+|.+.........  ...+|+.+++.+.   |+||+++++++.+....|++|||++
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~---~~~i~~~~~~~~~~~~~~~v~~~~~   81 (260)
T PF00069_consen    5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR---HPNIVQILDVFQDDNYLYIVMEYCP   81 (260)
T ss_dssp             EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT---BTTBCHEEEEEEESSEEEEEEEEET
T ss_pred             EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc---ccccccccccccccccccccccccc
Confidence            4578899999999999999999999999876544322  2345788888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        82 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~  133 (260)
T PF00069_consen   82 GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDE  133 (260)
T ss_dssp             TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999997778999999999999999999999       99999999984

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0578|consensus

Probab=99.73  E-value=6.8e-18  Score=138.67  Aligned_cols=85  Identities=28%  Similarity=0.449  Sum_probs=75.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|++++||||||++++||+.|++||...++-.....+.....+....+..+|+.+++|+.+||+.|+.+|+++.++|+|
T Consensus       444 k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  444 KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            57999999999999999999999999987776666666665555566788899999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          83 PFLQP   87 (249)
Q Consensus        83 ~~~~~   87 (249)
                      |||..
T Consensus       524 pFl~~  528 (550)
T KOG0578|consen  524 PFLKM  528 (550)
T ss_pred             hhhhh
Confidence            99953

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.73  E-value=5.7e-17  Score=133.24  Aligned_cols=116  Identities=19%  Similarity=0.290  Sum_probs=99.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.+|.+....+++.||+|.+....... ...+.+|+.+++.++   |+||+++++++.....+|+||||+++
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~  156 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN---HPNVVKCHDMFDHNGEIQVLLEFMDG  156 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC---CCCcceeeeEeccCCeEEEEEecCCC
Confidence            46788999999999988899999999986543222 355778999888876   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+.    ...++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       157 ~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  203 (353)
T PLN00034        157 GSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS  203 (353)
T ss_pred             Cccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC
Confidence            998642    34678888999999999999999       99999999864

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.73  E-value=7e-17  Score=129.57  Aligned_cols=119  Identities=19%  Similarity=0.304  Sum_probs=105.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..+|+|.+........+.+.+|+.+++.+.   |+||+++++.+......|+||||++||
T Consensus        26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~---h~~v~~~~~~~~~~~~~~lv~e~~~~~  102 (296)
T cd06654          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK---NPNIVNYLDSYLVGDELWVVMEYLAGG  102 (296)
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC---CCCEeeEEEEEEeCCEEEEeecccCCC
Confidence            45788888999999888899999999998765554566788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. .+++.++..++.|++.|+.|||       |+||+||++..
T Consensus       103 ~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~  151 (296)
T cd06654         103 SLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM  151 (296)
T ss_pred             CHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC
Confidence            999999754 5899999999999999999999       99999999954

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.73  E-value=1.4e-17  Score=131.01  Aligned_cols=120  Identities=12%  Similarity=0.119  Sum_probs=99.5

Q ss_pred             cccCCCCcceeeccCCCCC-------CeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAPS-------QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      .+|.|.++.||.+.....+       ..+|+|.+........+.+..|+.+++.+.   ||||+++++.+......++||
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~---h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLS---HKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCC---CCChhheeeEEEeCCCcEEEE
Confidence            4577888999988765433       348888886544333356677888887776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++.+++ .+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~  136 (258)
T cd05078          79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIRE  136 (258)
T ss_pred             ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecc
Confidence            9999999999998754 5899999999999999999999       999999999654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.73  E-value=7.9e-17  Score=128.56  Aligned_cols=121  Identities=21%  Similarity=0.204  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.+|.+....+++.||+|.+........   ..+.+|+.+++.++   |+||+++++.+.+....|+||||+
T Consensus         6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~---~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05630           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN---SRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC---CCCeeeeeEEEecCCEEEEEEEec
Confidence            457889999999999999999999999876533221   34567888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...+  .+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~  138 (285)
T cd05630          83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH  138 (285)
T ss_pred             CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence            9999999986543  4899999999999999999999       899999998653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=6.6e-17  Score=127.63  Aligned_cols=119  Identities=23%  Similarity=0.408  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---------hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---------QNFGKEINILKELTELHHENVVELLHCKESDQHVY  192 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~  192 (249)
                      ..++.|.++.+|.+.+..+++.+|+|.+........         +.+.+|+.+++.++   ||||+++++++......+
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   82 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ---HENIVQYLGSSLDADHLN   82 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC---CCCeeeEEEEEEeCCccE
Confidence            356778889999998888899999998865432211         34667888887776   999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       193 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ++|||+++++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++.
T Consensus        83 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~  140 (267)
T cd06628          83 IFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD  140 (267)
T ss_pred             EEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc
Confidence            99999999999999998888999999999999999999999       9999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.73  E-value=7.4e-17  Score=129.50  Aligned_cols=119  Identities=20%  Similarity=0.300  Sum_probs=104.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..||+|.+..+.....+.+.+|+.+++.+.   |+||+++++++......|+||||++|+
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e~~~~~  101 (297)
T cd06656          25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK---NPNIVNYLDSYLVGDELWVVMEYLAGG  101 (297)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCC---CCCEeeEEEEEecCCEEEEeecccCCC
Confidence            46788899999999988899999999997655444456778888887776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       102 ~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~  150 (297)
T cd06656         102 SLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM  150 (297)
T ss_pred             CHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            999999764 4899999999999999999999       99999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=8.4e-17  Score=126.70  Aligned_cols=120  Identities=22%  Similarity=0.326  Sum_probs=104.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....+++.+|+|.+.......     .+.+.+|+.+++.+.   ||||+++++++.....+|++||
T Consensus         8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e   84 (263)
T cd06625           8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ---HERIVQYYGCLRDDETLSIFME   84 (263)
T ss_pred             ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC---CCCeeeeEEEEccCCeEEEEEE
Confidence            46788889999999988899999999987543211     134667888777766   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |++|++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~  139 (263)
T cd06625          85 YMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS  139 (263)
T ss_pred             ECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            9999999999998888999999999999999999999       99999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.73  E-value=6.2e-17  Score=127.94  Aligned_cols=118  Identities=25%  Similarity=0.304  Sum_probs=103.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      .++.|.++.+|.+....++..||+|.+........+.+.+|+.+++.++   |+||+++++++......|++|||+++++
T Consensus        15 ~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~~   91 (268)
T cd06624          15 VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK---HRNIVQYLGSDSENGFFKIFMEQVPGGS   91 (268)
T ss_pred             EEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC---CCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence            5778889999999888889999999987654444456788888888776   9999999999999999999999999999


Q ss_pred             HHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         203 LADYLVSK-GTL--SEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       203 L~~~l~~~-~~~--~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |.+++... +.+  ++..+..++.|++.|+.|||       |+||+||++.
T Consensus        92 L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~  142 (268)
T cd06624          92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN  142 (268)
T ss_pred             HHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc
Confidence            99999875 445  78889999999999999999       9999999994

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.73  E-value=5.4e-17  Score=128.71  Aligned_cols=121  Identities=18%  Similarity=0.265  Sum_probs=102.2

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|+++.+|.+...     ...+.+|+|.+...... ..+.+.+|+++++.++   |+||+++++++.+....|+||
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~   87 (275)
T cd05046          11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS---HKNVVRLLGLCREAEPHYMIL   87 (275)
T ss_pred             eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC---CcceeeeEEEECCCCcceEEE
Confidence            45688889999988753     24567899988654433 2356788999888877   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKG---------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++...+         .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        88 e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~  153 (275)
T cd05046          88 EYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ  153 (275)
T ss_pred             EecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC
Confidence            9999999999998765         6899999999999999999999       999999999653

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.72  E-value=3.6e-17  Score=127.05  Aligned_cols=111  Identities=17%  Similarity=0.213  Sum_probs=95.4

Q ss_pred             CCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHH
Q psy4166         127 SPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY  206 (249)
Q Consensus       127 g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~  206 (249)
                      |.++.++++.+..+++.||+|.+.+...     ..+|...+...   .||||+++++++.+...+|++|||++||+|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-----~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-----YSRERLTIIPH---CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-----hhhHHHHHHhc---CCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            6778899999999999999999976532     22344333333   399999999999999999999999999999999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         207 LVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       207 l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +.+...+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~  121 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR  121 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC
Confidence            988777999999999999999999999       999999998754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.72  E-value=5.7e-17  Score=131.92  Aligned_cols=117  Identities=14%  Similarity=0.103  Sum_probs=99.9

Q ss_pred             CCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCH
Q psy4166         126 TSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL  203 (249)
Q Consensus       126 ~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  203 (249)
                      .|.++.+|.+.+..+++.||+|.+......+  .+.+.+|+.+++.++   ||||++++++|......|+||||+.+|+|
T Consensus        10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~---h~niv~~~~~~~~~~~~~~v~e~~~~~~l   86 (328)
T cd08226          10 FCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFR---HPNIMTSWTVFTTGSWLWVISPFMAYGSA   86 (328)
T ss_pred             ccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCcceEeeeEecCCceEEEEecccCCCH
Confidence            4577889999998999999999987543222  245677777777665   99999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         204 ADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       204 ~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .+++.+..  .+++..+..++.|++.|+.|||       |+||+|||+..+
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~  137 (328)
T cd08226          87 NSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD  137 (328)
T ss_pred             HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC
Confidence            99998743  4899999999999999999999       999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1151|consensus

Probab=99.72  E-value=1.3e-17  Score=133.85  Aligned_cols=121  Identities=21%  Similarity=0.280  Sum_probs=106.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-eCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-------TQNFGKEINILKELTELHHENVVELLHCKE-SDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-~~~~~~l  193 (249)
                      ...|.|.|+.||.+.+....+.||+|+-..++...       .+...+|-+|++.+.   ||-||++|++|. +.+..|.
T Consensus       469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD---HpRIVKlYDyfslDtdsFCT  545 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD---HPRIVKLYDYFSLDTDSFCT  545 (775)
T ss_pred             HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC---cceeeeeeeeeeecccccee
Confidence            35788999999999999999999999876543222       134678999999887   999999999996 6778999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~  245 (249)
                      |+|||+|-+|..+|+.++.++|.+++.++-||..||.||.         |+||.|||+++.
T Consensus       546 VLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G  606 (775)
T KOG1151|consen  546 VLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG  606 (775)
T ss_pred             eeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC
Confidence            9999999999999999999999999999999999999997         999999999863

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1e-16  Score=126.10  Aligned_cols=120  Identities=25%  Similarity=0.307  Sum_probs=106.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ...+.|.++.+|.+....++..+|+|.+........+.+.+|+.+++.++   ||||+++++++.+...+|++|||++++
T Consensus         9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~l~~e~~~~~   85 (262)
T cd06613           9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR---HPNIVAYFGSYLRRDKLWIVMEYCGGG   85 (262)
T ss_pred             EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC---CCChhceEEEEEeCCEEEEEEeCCCCC
Confidence            45678889999999988889999999998655444466788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... ..+++.++..++.|++.|+.|||       |++|+||++..
T Consensus        86 ~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~  136 (262)
T cd06613          86 SLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE  136 (262)
T ss_pred             cHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC
Confidence            999999876 67999999999999999999999       89999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.72  E-value=9.7e-17  Score=127.78  Aligned_cols=120  Identities=22%  Similarity=0.340  Sum_probs=104.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..+|+|.+........+.+.+|+.+++.+.   |+||+++++++......|+||||+++|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD---HPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC---CCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            45788889999999998899999999987654433456778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|..++.+ .+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        88 ~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~  138 (282)
T cd06643          88 AVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL  138 (282)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc
Confidence            99998865 456999999999999999999999       89999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1.1e-16  Score=125.85  Aligned_cols=121  Identities=26%  Similarity=0.291  Sum_probs=99.4

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .++.|.++.+|.+....+++.||+|.+.+......   .....|..++..  ..+|+||+++++++.....+|+||||++
T Consensus         3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI--QGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh--cCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            45778889999999888999999999876432221   123334333322  2359999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |++|.+++...+.+++..+..++.|++.|+.|||       |++|.||++..+
T Consensus        81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~  133 (260)
T cd05611          81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT  133 (260)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence            9999999998888999999999999999999999       999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.72  E-value=6.3e-17  Score=128.13  Aligned_cols=120  Identities=20%  Similarity=0.355  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc----------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK----------TQNFGKEINILKELTELHHENVVELLHCKESDQHV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~  191 (249)
                      ..+|.|.++.+|.+....+++.+|+|.+.......          .+.+.+|+.+++.++   |+||+++++++......
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~   83 (272)
T cd06629           7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD---HLNIVQYLGFETTEEYL   83 (272)
T ss_pred             ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC---CCCcceEEEEeccCCce
Confidence            46788899999999888889999999886421110          124566777777766   99999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         192 YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++||||++||+|.+++.+.+.+++..++.++.|++.|+.|||       |++|+||++..
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~  143 (272)
T cd06629          84 SIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA  143 (272)
T ss_pred             EEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC
Confidence            999999999999999998888999999999999999999999       89999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.72  E-value=7.9e-17  Score=126.86  Aligned_cols=118  Identities=23%  Similarity=0.408  Sum_probs=103.4

Q ss_pred             cCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         125 STSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       125 ~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      |.|.++.+|.+....+++.+|+|.+.+.....   .+.+.+|+.+++.++   |+||+++++.+.+...+|++|||++++
T Consensus         2 g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           2 GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN---HPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC---CCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            56778899999988889999999997654322   245778888887776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.+.+++..+..++.|++.|+.|||       |++|.||++...
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~  129 (262)
T cd05572          79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN  129 (262)
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC
Confidence            99999998877999999999999999999999       999999998653

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0588|consensus

Probab=99.72  E-value=1.6e-17  Score=138.81  Aligned_cols=89  Identities=33%  Similarity=0.504  Sum_probs=75.7

Q ss_pred             CCCCCCc-chhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           1 MSMKYDA-KADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         1 ~~~~y~~-~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +|.+|+- ++||||+|||||.|++|+.||.+++...+...+.   ......|..++.++++||++||..||.+|+|.++|
T Consensus       184 ~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~---~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI  260 (786)
T KOG0588|consen  184 SGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ---RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEI  260 (786)
T ss_pred             cCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH---cCcccCCCcCCHHHHHHHHHHhccCccccccHHHH
Confidence            4788876 8999999999999999999999887766655443   44456788899999999999999999999999999


Q ss_pred             hcCCCCCCCCCCC
Q psy4166          80 FAHPFLQPLAPHP   92 (249)
Q Consensus        80 ~~~~~~~~~~~~~   92 (249)
                      ++|||+......+
T Consensus       261 ~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  261 LKHPFLSGYTSLP  273 (786)
T ss_pred             hhCchhhcCCCCC
Confidence            9999998655433

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.72  E-value=3.6e-17  Score=135.34  Aligned_cols=119  Identities=22%  Similarity=0.324  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----eEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESDQ-----HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----~~~lv  194 (249)
                      ..+|.|.+|.+|.+.+..+++.||+|.+.....  ...+.+.+|+.+++.++   |+||+++++++....     ..|+|
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv   82 (372)
T cd07853           6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK---HDNVLSALDILQPPHIDPFEEIYVV   82 (372)
T ss_pred             ceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC---CCCcCCHhheecCCCccccceEEEE
Confidence            467889999999999888999999999865321  12245678888888776   999999999998776     89999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+. ++|.+++...+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        83 ~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~  138 (372)
T cd07853          83 TELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS  138 (372)
T ss_pred             eeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC
Confidence            99996 689999988778999999999999999999999       99999999965

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0575|consensus

Probab=99.72  E-value=1.8e-17  Score=137.33  Aligned_cols=82  Identities=27%  Similarity=0.495  Sum_probs=72.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..+|+..+||||+||++|.|+.|+|||...+-.+....+.....   ..|..++.++++||.++|..||.+||++++++.
T Consensus       192 k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y---~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  192 KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY---SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc---ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            46899999999999999999999999998887777766655443   446679999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      |+||.
T Consensus       269 h~Ff~  273 (592)
T KOG0575|consen  269 HPFFK  273 (592)
T ss_pred             CHhhh
Confidence            99994

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.72  E-value=1e-16  Score=127.76  Aligned_cols=120  Identities=23%  Similarity=0.326  Sum_probs=100.6

Q ss_pred             ccccCCCCcceeecc----CCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL----SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~  195 (249)
                      ..++.|.++.+|.+.    ...++..||+|.+........+.+.+|+++++.++   ||||+++++++..  ...+|+||
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv~   86 (284)
T cd05081          10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGRRNLRLVM   86 (284)
T ss_pred             eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC---CCCeeEEEEEEccCCCCceEEEE
Confidence            457888889998875    45678899999987654433456788999888876   9999999998754  34689999


Q ss_pred             eccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++.+. +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        87 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~  143 (284)
T cd05081          87 EYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES  143 (284)
T ss_pred             EecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC
Confidence            999999999999765 45899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0986|consensus

Probab=99.72  E-value=3.7e-18  Score=136.93  Aligned_cols=120  Identities=22%  Similarity=0.235  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++|.|.+|.|+.+.-..+|+.||+|++.+.....+   .....|-.++..++   .+.||.+-..|++.+.+|+||..|
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~---s~FiVslaYAfeTkd~LClVLtlM  267 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS---SPFIVSLAYAFETKDALCLVLTLM  267 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc---cCcEEEEeeeecCCCceEEEEEee
Confidence            367888999999999999999999999988765544   33678888888877   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .||+|.-.|...|  .|+|..++.|+.+|+.||.+||       |+||+|||+-.
T Consensus       268 NGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd  322 (591)
T KOG0986|consen  268 NGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD  322 (591)
T ss_pred             cCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc
Confidence            9999999998876  6999999999999999999999       99999999854

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.72  E-value=1.3e-16  Score=127.78  Aligned_cols=120  Identities=20%  Similarity=0.304  Sum_probs=104.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.+..++..+|+|.+........+.+.+|+.+++.++   |+||+++++.+.....+|+||||++|+
T Consensus        18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   94 (292)
T cd06644          18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN---HPYIVKLLGAFYWDGKLWIMIEFCPGG   94 (292)
T ss_pred             heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC---CCcEeeeEEEEEeCCeEEEEEecCCCC
Confidence            45788999999999998899999999997654444456777888887776   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|..++.+ .+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        95 ~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~  145 (292)
T cd06644          95 AVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL  145 (292)
T ss_pred             cHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC
Confidence            99988865 356899999999999999999999       99999999964

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.72  E-value=4.3e-17  Score=128.10  Aligned_cols=120  Identities=23%  Similarity=0.353  Sum_probs=105.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....++..||+|.+.+.....   .+.+.+|+..++.++   ||||+++++++......|+||||+
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~   82 (258)
T cd05578           6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN---HPFLVNLWYSFQDEENMYLVVDLL   82 (258)
T ss_pred             EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC---CCChHHHHHhhcCCCeEEEEEeCC
Confidence            45788899999999988899999999998654322   245677888777766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .|++|.+++.+...+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        83 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~  135 (258)
T cd05578          83 LGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE  135 (258)
T ss_pred             CCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC
Confidence            99999999988877999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.72  E-value=9.2e-17  Score=126.65  Aligned_cols=118  Identities=14%  Similarity=0.128  Sum_probs=95.5

Q ss_pred             ccCCCCcceeeccCC------------CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeE
Q psy4166         124 VSTSPPRPSSLLLSP------------APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHV  191 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~------------~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~  191 (249)
                      +|.|.++.+|.+...            .....+|+|.+..........+..|+.+++.+.   ||||+++++++......
T Consensus         3 lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~---hp~iv~~~~~~~~~~~~   79 (262)
T cd05077           3 LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS---HKHIVLLYGVCVRDVEN   79 (262)
T ss_pred             cccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC---CCCEeeEEEEEecCCCC
Confidence            466777788877532            123468888876544333345677777777666   99999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         192 YLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|||+++|+|..++.+. +.+++..+..++.|++.|+.|||       |+||.|||+..
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~  140 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR  140 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec
Confidence            9999999999999998764 56899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.71  E-value=1.1e-16  Score=127.79  Aligned_cols=121  Identities=22%  Similarity=0.220  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.+|.+....+++.+|+|.+.......   ...+.+|+.+++.++   |+||+++++++.+.+..|++|||+
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~---~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05632           6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN---SQFVVNLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC---CcCceeEEEEEecCCEEEEEEEec
Confidence            45788999999999998899999999997654322   134667888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++...+  .+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~  138 (285)
T cd05632          83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY  138 (285)
T ss_pred             cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC
Confidence            9999999887643  5999999999999999999999       999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.71  E-value=1.7e-16  Score=124.44  Aligned_cols=120  Identities=22%  Similarity=0.303  Sum_probs=104.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.++.+....++..+++|.+.....  ...+.+.+|+.+++.++   |+||+++++++.+...++++|||++
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~~~e~~~   82 (256)
T cd08221           6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ---HPNIIAYYNHFMDDNTLLIEMEYAN   82 (256)
T ss_pred             eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC---CCCeeEEEeEEecCCeEEEEEEecC
Confidence            467888899999888888999999999875432  22355778888888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|+|.+++.+.  ..+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~  136 (256)
T cd08221          83 GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK  136 (256)
T ss_pred             CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC
Confidence            99999999875  35899999999999999999999       89999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.71  E-value=1.8e-16  Score=124.30  Aligned_cols=121  Identities=26%  Similarity=0.370  Sum_probs=103.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.++.+.+..++..+|+|.+..... ...+.+.+|+.+++.++   |+||+++++.+.+...+|++|||+++
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (255)
T cd08219           6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK---HPNIVAFKESFEADGHLYIVMEYCDG   82 (255)
T ss_pred             EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC---CCCcceEEEEEEECCEEEEEEeeCCC
Confidence            457888899999999989999999999865332 22345677888887776   99999999999999999999999999


Q ss_pred             CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++...  ..+++..+..++.|++.|+.|||       |+||.||++..+
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~  136 (255)
T cd08219          83 GDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN  136 (255)
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCC
Confidence            9999998753  35889999999999999999999       899999999653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0608|consensus

Probab=99.71  E-value=1.5e-17  Score=138.55  Aligned_cols=120  Identities=23%  Similarity=0.329  Sum_probs=106.7

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchh---cHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|-|+||.|.++..-.+...||+|.+++..+-.+.   .+..|-.||-...   ++=||+||..|.+.+.+|+||||++
T Consensus       636 ~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD---n~WVVrLyySFQDkdnLYFVMdYIP  712 (1034)
T KOG0608|consen  636 TIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD---NEWVVRLYYSFQDKDNLYFVMDYIP  712 (1034)
T ss_pred             eecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC---CcceEEEEEEeccCCceEEEEeccC
Confidence            368899999999988889999999999887554432   3567788888776   8999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|..+|-+-|.|.|..|++|+.++.+|+.+.|       ||||.||||-..
T Consensus       713 GGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd  765 (1034)
T KOG0608|consen  713 GGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD  765 (1034)
T ss_pred             CccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccC
Confidence            9999999999999999999999999999998888       999999999654

>KOG1290|consensus

Probab=99.71  E-value=8.7e-17  Score=130.13  Aligned_cols=121  Identities=21%  Similarity=0.230  Sum_probs=103.3

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcC--C---CCeeeeeEeEEe----CCeEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELH--H---ENVVELLHCKES----DQHVYL  193 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~--h---~niv~l~~~~~~----~~~~~l  193 (249)
                      +.|=|.|+.|+++++....+.||+|+++... .-.+....|+.+|+.+....  |   .+||+|++.|..    ..++|+
T Consensus        85 KLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCM  163 (590)
T KOG1290|consen   85 KLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCM  163 (590)
T ss_pred             eccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEE
Confidence            4677889999999999999999999987543 22367788999999887432  3   369999999975    568999


Q ss_pred             EEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      |+|++ |-+|..+|...  +.++...++.+++||+.||.|||        |+|||||||+-|
T Consensus       164 VfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  164 VFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             Eehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            99999 88999999985  34999999999999999999999        999999999877

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.71  E-value=1.5e-16  Score=126.81  Aligned_cols=120  Identities=13%  Similarity=0.155  Sum_probs=105.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....+++.||+|.+..... ...+.+.+|+++++.+.   |+||+++++++.....+|+||||+++
T Consensus        11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (284)
T cd06620          11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR---SPYIVSFYGAFLNENNICMCMEFMDC   87 (284)
T ss_pred             HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC---CCCcceEeeeEecCCEEEEEEecCCC
Confidence            457889999999999888899999998865432 22356778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      |+|.+++.+.+.+++..+..++.+++.|+.|||        |++|+||++..
T Consensus        88 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~  139 (284)
T cd06620          88 GSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS  139 (284)
T ss_pred             CCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC
Confidence            999999998888999999999999999999998        68999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.71  E-value=1.3e-16  Score=125.19  Aligned_cols=119  Identities=19%  Similarity=0.257  Sum_probs=100.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..+|+|.+...... ...+.+|+.+++.++   |+||+++++++......|+||||++|+
T Consensus        10 ~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~-~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05059          10 KELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS-EDDFIEEAKVMMKLS---HPNLVQLYGVCTKQRPIFIVTEYMANG   84 (256)
T ss_pred             hhhccCCCceEEEeEec-CCccEEEEEeccCCCC-HHHHHHHHHHHHhCC---CCCEEEEEEEEcCCCceEEEEecCCCC
Confidence            45788888999988764 5668999988654322 245778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++..+ +.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~  136 (256)
T cd05059          85 CLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGED  136 (256)
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCC
Confidence            999999864 46899999999999999999999       999999999753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0662|consensus

Probab=99.71  E-value=5.3e-17  Score=115.73  Aligned_cols=119  Identities=28%  Similarity=0.400  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .++|.|.+|.++.+.+..+.+.||+|+++.....+  .....+|+.+++.++   |.|||++++.......+-+|.|||.
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk---hknivrl~dvlhsdkkltlvfe~cd   84 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK---HKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh---hcceeehhhhhccCceeEEeHHHhh
Confidence            46899999999999999999999999998754333  356789999999998   9999999999999999999999995


Q ss_pred             CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       .+|..+... +|.++.+.++.++.|++.|+.+.|       |+||.|+||-.
T Consensus        85 -qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~  136 (292)
T KOG0662|consen   85 -QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR  136 (292)
T ss_pred             -HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc
Confidence             699999987 567999999999999999999888       99999999864

>PRK10345 hypothetical protein; Provisional

Probab=99.71  E-value=1.8e-16  Score=119.68  Aligned_cols=117  Identities=16%  Similarity=0.234  Sum_probs=91.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhh--cCCCCeeeeeEeEEeCC---eEE-EEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTE--LHHENVVELLHCKESDQ---HVY-LVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~--~~h~niv~l~~~~~~~~---~~~-lv~  195 (249)
                      ..+|.|.++.||.  ++.+... ++|++........+.+.+|+.+++.+..  ..||||++++++++++.   .++ +||
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~   84 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA   84 (210)
T ss_pred             ceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence            5688899999995  6656555 6998876544344678999999998841  13899999999999873   444 789


Q ss_pred             ec--cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHhh-------cCCccceeeee
Q psy4166         196 EF--CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ-LYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~--~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l-~ylh-------d~kp~nili~~  244 (249)
                      ||  +++|+|.+++.+. .+++.  ..++.+++.++ .|||       |+||+|||+..
T Consensus        85 e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345         85 DFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             cCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence            99  6689999999765 47666  35577777776 8999       99999999964

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.71  E-value=1.1e-16  Score=142.19  Aligned_cols=120  Identities=21%  Similarity=0.266  Sum_probs=101.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||.+.+..+++.||+|++.......   .+.+.+|+.+++.+.   ||||+++++++.+.+..|++|||+
T Consensus         8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~---HPNIVkl~~v~~d~~~lyLVMEY~   84 (932)
T PRK13184          8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI---HPGIVPVYSICSDGDPVYYTMPYI   84 (932)
T ss_pred             EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC---CcCcCeEEEEEeeCCEEEEEEEcC
Confidence            46788999999999998999999999997543221   245778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSK-----------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~-----------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.           ..++...+..++.|++.|+.|||       |+||+|||+..
T Consensus        85 eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~  148 (932)
T PRK13184         85 EGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL  148 (932)
T ss_pred             CCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC
Confidence            999999999742           12456678889999999999999       99999999854

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.71  E-value=1.6e-16  Score=126.62  Aligned_cols=120  Identities=21%  Similarity=0.250  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....+++.||+|++......  ..+.+.+|+.+++.++   |+||+++++++.....+|+||||++
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~v~e~~~   83 (286)
T cd07847           7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK---HPNLVNLIEVFRRKRKLHLVFEYCD   83 (286)
T ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC---CCCEeeeeeEEeeCCEEEEEEeccC
Confidence            3567888899999998888999999998754322  1245678888888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|..++...+.+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~  135 (286)
T cd07847          84 HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK  135 (286)
T ss_pred             ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC
Confidence            9998888877667999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.71  E-value=1.5e-16  Score=128.37  Aligned_cols=120  Identities=25%  Similarity=0.322  Sum_probs=102.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.+|.+....++..||+|.+....... ...+.+|+.+++.++   |+||+++++++......|+||||+++
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~   88 (309)
T cd07872          12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK---HANIVTLHDIVHTDKSLTLVFEYLDK   88 (309)
T ss_pred             EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC---CCCcceEEEEEeeCCeEEEEEeCCCC
Confidence            46788999999999988899999999997543322 235667888888776   99999999999999999999999975


Q ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       +|.+++...+ .+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        89 -~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~  140 (309)
T cd07872          89 -DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER  140 (309)
T ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence             8999887654 4889999999999999999999       999999999643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.2e-16  Score=129.26  Aligned_cols=121  Identities=23%  Similarity=0.359  Sum_probs=104.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.||+|.+.......   .+.+..|+.+++.++   |+||+++++.+.+....|+||||+
T Consensus         7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~   83 (316)
T cd05574           7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD---HPFLPTLYASFQTETYLCLVMDYC   83 (316)
T ss_pred             eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC---CCCchhheeeeecCCEEEEEEEec
Confidence            45678888999999998899999999998654332   245677888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .|++|.+++.+.  ..+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        84 ~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~  139 (316)
T cd05574          84 PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHES  139 (316)
T ss_pred             CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCC
Confidence            999999999864  46899999999999999999999       999999999753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.71  E-value=8.5e-17  Score=126.34  Aligned_cols=117  Identities=14%  Similarity=0.103  Sum_probs=97.5

Q ss_pred             ccCCCCcceeeccCCCCC----------CeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         124 VSTSPPRPSSLLLSPAPS----------QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      +|.|.++.+|.+....++          ..+++|.+...... ...+.+|+.+++.++   |+||+++++++.. ...|+
T Consensus         3 lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~---h~~i~~~~~~~~~-~~~~l   77 (259)
T cd05037           3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLS---HKHLVKLYGVCVR-DENIM   77 (259)
T ss_pred             ccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCC---CcchhheeeEEec-CCcEE
Confidence            567888888888776555          35778877644322 356778888888776   9999999999888 78899


Q ss_pred             EEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+++|+|.+++.+.+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        78 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  137 (259)
T cd05037          78 VEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARY  137 (259)
T ss_pred             EEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecC
Confidence            999999999999998766 6899999999999999999999       999999999643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.71  E-value=1.9e-16  Score=125.02  Aligned_cols=120  Identities=23%  Similarity=0.297  Sum_probs=102.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.||+|.+......+   ...+.+|+.+++.++   ||||+++++++.+....|++|||+
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~   84 (267)
T cd08228           8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN---HPNVIKYLDSFIEDNELNIVLELA   84 (267)
T ss_pred             eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC---CcceeeeeeeEEECCeEEEEEEec
Confidence            35678889999999988899999999886533222   235677888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++..    ...+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~  141 (267)
T cd08228          85 DAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA  141 (267)
T ss_pred             CCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC
Confidence            99999998863    234889999999999999999999       89999999965

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.71  E-value=1.7e-16  Score=132.15  Aligned_cols=87  Identities=24%  Similarity=0.397  Sum_probs=69.7

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+..     ...++.||+|++....... .+.+.+|+.++..+.  .||||+++++++.....+|+||
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~--~H~niv~~~~~~~~~~~~~iv~  120 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG--PHLNIVNLLGACTKGGPIYIIT  120 (401)
T ss_pred             hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC--CCCCeEEEEEEEccCCCcEEEE
Confidence            4678899999998873     3456789999997543222 235677888877664  3999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc
Q psy4166         196 EFCNGGDLADYLVSK  210 (249)
Q Consensus       196 e~~~~g~L~~~l~~~  210 (249)
                      |||++|+|.+++++.
T Consensus       121 E~~~~g~L~~~l~~~  135 (401)
T cd05107         121 EYCRYGDLVDYLHRN  135 (401)
T ss_pred             eccCCCcHHHHHHhc
Confidence            999999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.71  E-value=2.3e-16  Score=124.75  Aligned_cols=114  Identities=19%  Similarity=0.200  Sum_probs=97.0

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCH
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL  203 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  203 (249)
                      .+.|.++.+|.+.+..++..+|+|.+.......     .|+.....+.  +|+||+++++++.....+|+||||++||+|
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~--~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L   96 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMK--DNPNFIKLYYSVTTLKGHVLIMDYIKDGDL   96 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhh--cCCCEEEEEEEEecCCeeEEEEEcCCCCcH
Confidence            588889999999999999999999987543221     1332322222  599999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         204 ADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       204 ~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .+++.+++.+++.++..++.|++.|+.|||       |+||+||++..
T Consensus        97 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~  144 (267)
T PHA03390         97 FDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR  144 (267)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC
Confidence            999998878999999999999999999999       99999999864

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.71  E-value=1.7e-16  Score=125.54  Aligned_cols=120  Identities=22%  Similarity=0.197  Sum_probs=98.1

Q ss_pred             cccCCCCcceeeccC--CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLS--PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.+|.+..  ..++..+|+|.+...... ....+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ---HSNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC---CCCEeeEEEEEcCCCCcEEEEECCC
Confidence            357788899998753  345678999988754322 2245777888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKG-----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+|.+++...+     .+++..++.++.|++.|+.|||       |+||+||++..+
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~  136 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD  136 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC
Confidence            999999997642     3567788899999999999999       999999999754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.71  E-value=1.8e-16  Score=127.14  Aligned_cols=119  Identities=23%  Similarity=0.330  Sum_probs=105.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+........+.+.+|+.+++.++   |+||+++++++.....+|+||||++++
T Consensus        25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~  101 (296)
T cd06655          25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK---NPNIVNFLDSFLVGDELFVVMEYLAGG  101 (296)
T ss_pred             EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC---CCceeeeeeeEecCceEEEEEEecCCC
Confidence            45788889999999888899999999997655444456778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. .+++.++..++.+++.|+.|||       |+||+||++..
T Consensus       102 ~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~  150 (296)
T cd06655         102 SLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM  150 (296)
T ss_pred             cHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            999999765 5999999999999999999999       99999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.71  E-value=1.3e-16  Score=142.56  Aligned_cols=120  Identities=23%  Similarity=0.391  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ..+|.|.++.||++.+..++..+|+|.+.......  ...+.+|+.+++.+.   |||||+++++|.+  ...+||||||
T Consensus        19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~---HPNIVrl~d~f~de~~~~lyIVMEY   95 (1021)
T PTZ00266         19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK---HKNIVRYIDRFLNKANQKLYILMEF   95 (1021)
T ss_pred             EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC---CCCcCeEEEEEEecCCCEEEEEEeC
Confidence            56788999999999999999999999987543322  345778999888887   9999999998854  4679999999


Q ss_pred             cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh--------------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH--------------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh--------------d~kp~nili~~  244 (249)
                      +++|+|.++|...    +.+++..++.++.||+.||.|||              |+||+||||..
T Consensus        96 ~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         96 CDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             CCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            9999999999763    46999999999999999999999              48999999964

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.71  E-value=9.7e-17  Score=128.82  Aligned_cols=118  Identities=20%  Similarity=0.345  Sum_probs=103.0

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      .++.|.++.+|.+....+++.||+|.+........+.+.+|+.+++.+.   ||||+++++.+......|++|||+++++
T Consensus        28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~---hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ---HQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCC---CCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            5678889999999888889999999997654444456778888887776   9999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         203 LADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       203 L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |.+++... .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       105 L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~  152 (297)
T cd06659         105 LTDIVSQT-RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL  152 (297)
T ss_pred             HHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc
Confidence            99988654 5899999999999999999999       99999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.71  E-value=1.5e-16  Score=128.00  Aligned_cols=121  Identities=24%  Similarity=0.322  Sum_probs=99.5

Q ss_pred             ccccCCCCcceeeccCCCCCCe--eEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQH--VAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~--vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.+|.+....++..  +|+|.+...... ....+.+|+.++..+.  +|+||+++++++.+...+|+||||+
T Consensus        13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~--~h~~iv~~~~~~~~~~~~~lv~e~~   90 (303)
T cd05088          13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLYLAIEYA   90 (303)
T ss_pred             eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc--CCCCcceEEEEECCCCCceEEEEeC
Confidence            4578899999999987666654  577776543221 2245678888888773  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++.+.+                .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~  159 (303)
T cd05088          91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  159 (303)
T ss_pred             CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence            9999999998653                4788999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0201|consensus

Probab=99.70  E-value=3e-18  Score=136.76  Aligned_cols=122  Identities=20%  Similarity=0.322  Sum_probs=112.6

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccch-hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ...+|.|.||.||++.+..+++.||+|++.....++. +.+++|+.++..+.   ++||.++|+.+.....+|++||||.
T Consensus        18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~---~~~it~yygsyl~g~~LwiiMey~~   94 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD---SPNITEYYGSYLKGTKLWIIMEYCG   94 (467)
T ss_pred             chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC---cchHHhhhhheeecccHHHHHHHhc
Confidence            3678999999999999999999999999987765543 67889999999887   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++.+.++..+.+.|..+..++++++.|+.|||       |+|+-|||++-+
T Consensus        95 gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~  147 (467)
T KOG0201|consen   95 GGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES  147 (467)
T ss_pred             CcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc
Confidence            9999999999887799999999999999999999       999999999876

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.70  E-value=1.5e-16  Score=125.74  Aligned_cols=119  Identities=22%  Similarity=0.234  Sum_probs=95.7

Q ss_pred             cccCCCCcceeeccC--CCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLS--PAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.+|.+..  ......+|+|.+....... ...+.+|+..++.+.   |+||+++++.+.+...+|+||||++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~---h~nii~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELN---HPNVLQCLGQCIESIPYLLVLEFCP   78 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCC---CCCcceEEEEECCCCceEEEEEeCC
Confidence            467888999987743  2345578888876443222 245677888887766   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG-----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|+|.+++.+.+     .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~  135 (269)
T cd05042          79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA  135 (269)
T ss_pred             CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC
Confidence            999999998753     2467788999999999999999       99999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0660|consensus

Probab=99.70  E-value=5.2e-17  Score=126.92  Aligned_cols=91  Identities=32%  Similarity=0.443  Sum_probs=69.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-----------------------hcccCCCCCC-----CC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYE-----------------------KNLVLVPKVP-----VG   53 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~-----------------------~~~~~~~~~~-----~~   53 (249)
                      ..+|+.++||||+|||+.||++|++.|.|.+.-.-...+.                       +..+..+..|     ..
T Consensus       202 ~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~  281 (359)
T KOG0660|consen  202 SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPN  281 (359)
T ss_pred             cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCC
Confidence            4689999999999999999999999998876522111111                       1111222222     35


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      .++.+.+|+.+||..||.+|+|+++++.|||+.......
T Consensus       282 a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  282 ANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence            789999999999999999999999999999998765444

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.70  E-value=6.9e-17  Score=127.11  Aligned_cols=117  Identities=30%  Similarity=0.401  Sum_probs=102.1

Q ss_pred             cCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         125 STSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       125 ~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      +.|.++.+|.+....+++.+|+|.+......   ..+.+.+|+++++.+.   |+||+++++.+......|++|||++|+
T Consensus         2 g~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           2 SKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ---SPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC---CcchhHHHHheecCcEEEEEEecCCCC
Confidence            5577889999999888999999998765432   2245667777777766   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~  128 (265)
T cd05579          79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS  128 (265)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC
Confidence            99999998778999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.70  E-value=1.7e-16  Score=124.64  Aligned_cols=120  Identities=26%  Similarity=0.336  Sum_probs=104.6

Q ss_pred             cccCCCCcceeeccCCCC---CCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAP---SQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++.|.++.+|.+.....   +..+|+|.+....... .+.+.+|+..++.++   |+||+++++++.+...++++|||+
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG---HPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC---CCChheeeeeecCCCceEEEEEec
Confidence            357788899999887755   8899999997654332 356778888888877   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSK---------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++...         ..+++.++..++.|++.|+.|||       |++|+||++...
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~  141 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED  141 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC
Confidence            999999999885         67999999999999999999999       899999999764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.70  E-value=2e-16  Score=124.20  Aligned_cols=118  Identities=22%  Similarity=0.309  Sum_probs=100.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..+|+|.+...... ...+.+|+.+++.+.   ||||+++++++......|+||||++||
T Consensus        10 ~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~-~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~iv~e~~~~~   84 (256)
T cd05114          10 KELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS-EEDFIEEAKVMMKLS---HPKLVQLYGVCTQQKPLYIVTEFMENG   84 (256)
T ss_pred             eEecCCcCceEEEEEec-cCceEEEEecccCCcc-HHHHHHHHHHHHHCC---CCCceeEEEEEccCCCEEEEEEcCCCC
Confidence            45788889999987653 4567999988644322 356778999998877   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~  135 (256)
T cd05114          85 CLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS  135 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC
Confidence            999999764 46899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.70  E-value=6.1e-17  Score=129.65  Aligned_cols=119  Identities=20%  Similarity=0.332  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.+..++..||+|.+........+.+.+|+..++.++   |+||+++++.+...+..|+||||++++
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~---h~~ii~~~~~~~~~~~~~lv~e~~~~~  104 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH---HENVVDMYNSYLVGDELWVVMEFLEGG  104 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC---CCcHHHHHHheecCCeEEEEEeCCCCC
Confidence            45788889999999888889999999987644433456778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... .+++.++..++.|++.|+.|||       |+||+||++..
T Consensus       105 ~L~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~  153 (292)
T cd06658         105 ALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS  153 (292)
T ss_pred             cHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC
Confidence            999988654 5899999999999999999999       99999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.70  E-value=2e-16  Score=124.85  Aligned_cols=120  Identities=22%  Similarity=0.330  Sum_probs=101.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-----KTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv  194 (249)
                      ..++.|.++.+|.+.+..++..||+|.+......     ..+.+.+|+.+++.+.   |+||+++++++.+  ...+|++
T Consensus         8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~~v   84 (265)
T cd06652           8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL---HERIVQYYGCLRDPMERTLSIF   84 (265)
T ss_pred             eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC---CCCeeeEEeEeccCCCceEEEE
Confidence            4567788899999998889999999998643211     1235667888888776   9999999999876  3568999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~  141 (265)
T cd06652          85 MEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS  141 (265)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC
Confidence            999999999999988777999999999999999999999       99999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0615|consensus

Probab=99.70  E-value=1.6e-18  Score=137.46  Aligned_cols=85  Identities=27%  Similarity=0.447  Sum_probs=70.7

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhc-ccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKN-LVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      |..+||+||+||+||-+++|.+||.+..... +.+.+.++ ....|..+..++.++.+||..||..||++|+++.++++|
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence            3458999999999999999999998775544 55555444 444456677899999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          83 PFLQPLA   89 (249)
Q Consensus        83 ~~~~~~~   89 (249)
                      |||....
T Consensus       438 pW~~~~~  444 (475)
T KOG0615|consen  438 PWFKDAP  444 (475)
T ss_pred             hhhhccc
Confidence            9998654

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.70  E-value=7.5e-17  Score=128.67  Aligned_cols=120  Identities=18%  Similarity=0.206  Sum_probs=103.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..||+|.+...... ....+.+|+.+++.+.   |+||+++++++......|+||||++|
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (286)
T cd06622           7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV---SPYIVDFYGAFFIEGAVYMCMEYMDA   83 (286)
T ss_pred             hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC---CCcHHhhhhheecCCeEEEEEeecCC
Confidence            4578889999999998889999999988654221 1245778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVSK---GTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      ++|.+++.+.   ..+++..+..++.|++.|+.|||        |+||+||++..
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~  138 (286)
T cd06622          84 GSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG  138 (286)
T ss_pred             CCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC
Confidence            9999999874   36899999999999999999998        79999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.70  E-value=2.1e-16  Score=125.53  Aligned_cols=119  Identities=19%  Similarity=0.227  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+.+..++..||+|.+...... ....+.+|+.+++.+.   |+||+++++++.+....|+||||++|
T Consensus        10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06640          10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKGTKLWIIMEYLGG   86 (277)
T ss_pred             hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCEEEEEEecCCC
Confidence            4578888999999998888999999998754322 2245677888887776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++..+ .+++..+..++.|++.|+.|+|       |++|+||++..
T Consensus        87 ~~L~~~i~~~-~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~  136 (277)
T cd06640          87 GSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE  136 (277)
T ss_pred             CcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC
Confidence            9999999754 5899999999999999999999       99999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.70  E-value=2.2e-16  Score=124.59  Aligned_cols=119  Identities=23%  Similarity=0.332  Sum_probs=101.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+.. .++..+|+|.+......      ....+.+|+.+++.+.   |+||+++++++.+....|++|
T Consensus         6 ~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           6 EVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK---HVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC---CCCEeeEeeEeecCCeEEEEE
Confidence            3567888999998865 47889999988743211      1134677888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++|++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~  137 (265)
T cd06631          82 EFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP  137 (265)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC
Confidence            99999999999998888999999999999999999999       89999999963

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=2.3e-16  Score=123.79  Aligned_cols=117  Identities=23%  Similarity=0.273  Sum_probs=102.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+..  .++.||+|.+..... ..+.+.+|+.+++.++   |+||+++++++.+....|+||||++++
T Consensus        12 ~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e~~~~~   85 (256)
T cd05039          12 ATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLR---HPNLVQLLGVVLQGNPLYIVTEYMAKG   85 (256)
T ss_pred             eeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcC---CcceeeeEEEEcCCCCeEEEEEecCCC
Confidence            4567888899998865  478899999976543 3356788888888877   999999999999999999999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++....  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~  137 (256)
T cd05039          86 SLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE  137 (256)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC
Confidence            9999998765  6899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.70  E-value=2e-16  Score=126.44  Aligned_cols=120  Identities=18%  Similarity=0.273  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+..     ..++..+|+|.+........+.+.+|+.+++.++   |+||+++++++.....+|+|||
T Consensus        11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e   87 (288)
T cd05093          11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ---HEHIVKFYGVCVEGDPLIMVFE   87 (288)
T ss_pred             cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEecCCccEEEEE
Confidence            3567788899988753     3345678999887654333456788999888877   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKG-------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++...+             .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~  155 (288)
T cd05093          88 YMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE  155 (288)
T ss_pred             cCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence            999999999998654             3899999999999999999999       99999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.70  E-value=2.3e-16  Score=123.78  Aligned_cols=120  Identities=21%  Similarity=0.378  Sum_probs=104.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....++..|++|.+......     ..+.+.+|+.+++.+.   |+||+++++++.+...+|++||
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e   82 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ---HPNIVQYLGTEREEDNLYIFLE   82 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC---CCCchheeeeEecCCeEEEEEE
Confidence            3567888899999988888999999998754321     1245677888887776   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~  137 (258)
T cd06632          83 LVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT  137 (258)
T ss_pred             ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            9999999999998877999999999999999999999       99999999853

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0577|consensus

Probab=99.70  E-value=1.6e-17  Score=137.46  Aligned_cols=120  Identities=24%  Similarity=0.310  Sum_probs=104.9

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeeccc---ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN---LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      +..+|-|+||.||.+.+..++..||||++.-+.   .++.+.+..||+.++.+.   |||+|.+.+||......||||||
T Consensus        31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~---HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR---HPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc---CCCcccccceeeccchHHHHHHH
Confidence            356889999999999999999999999997442   333467889999999887   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |- |+-.|++.-. +++-|.++.-++.+++.||.|||       |+|-.|||++.
T Consensus       108 Cl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse  161 (948)
T KOG0577|consen  108 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSE  161 (948)
T ss_pred             Hh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecC
Confidence            95 5888888754 46889999999999999999999       99999999975

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.70  E-value=1.6e-16  Score=125.30  Aligned_cols=119  Identities=20%  Similarity=0.271  Sum_probs=103.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.....++.||+|.+..+.. ....+.+|+.+++.++   |+||+++++++.....++++|||+++|
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (263)
T cd05052          12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIK---HPNLVQLLGVCTREPPFYIITEFMTYG   87 (263)
T ss_pred             eecCCcccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCC---CCChhheEEEEcCCCCcEEEEEeCCCC
Confidence            356788889999998888899999999875432 2355778888888876   999999999999999999999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++....  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 ~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~  139 (263)
T cd05052          88 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE  139 (263)
T ss_pred             cHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC
Confidence            9999997643  4889999999999999999999       99999999954

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.70  E-value=3e-16  Score=123.06  Aligned_cols=120  Identities=17%  Similarity=0.225  Sum_probs=103.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..|++|.+......  ....+.+|+.+++.++   ||||+++++++.+....|+||||++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08529           6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD---SSYIIRYYESFLDKGKLNIVMEYAE   82 (256)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC---CCCeehheeeeccCCEEEEEEEeCC
Confidence            3467788899999998889999999998754322  2355778888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |++|.+++...  ..+++..+..++.+++.|+.|||       |++|+||++..
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~  136 (256)
T cd08529          83 NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA  136 (256)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC
Confidence            99999999874  46889999999999999999999       89999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.70  E-value=2.1e-16  Score=124.86  Aligned_cols=120  Identities=19%  Similarity=0.251  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCCCC---CCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAP---SQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....+   +..+|+|.+....... .+.+.+|+.+++.++   ||||+++++++.+...+|+||||
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~   86 (267)
T cd05066          10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD---HPNIIHLEGVVTKSKPVMIVTEY   86 (267)
T ss_pred             eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEecCCccEEEEEc
Confidence            4568888999998765433   3479999886543222 346778888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|+|.+++.+. +.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~  141 (267)
T cd05066          87 MENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS  141 (267)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC
Confidence            9999999999875 45899999999999999999999       99999999853

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.70  E-value=1.6e-16  Score=125.03  Aligned_cols=119  Identities=22%  Similarity=0.256  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.... +..+|+|.+..........+..|+.+++.++   |+||+++++++.+....|+||||+++|
T Consensus        12 ~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (261)
T cd05148          12 RKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR---HKHLISLFAVCSVGEPVYIITELMEKG   87 (261)
T ss_pred             hhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC---CcchhheeeeEecCCCeEEEEeecccC
Confidence            456888899999988866 8899999987665444466788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.  +.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~  139 (261)
T cd05148          88 SLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE  139 (261)
T ss_pred             CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC
Confidence            999999863  35889999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.70  E-value=1.6e-16  Score=127.52  Aligned_cols=119  Identities=24%  Similarity=0.315  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---c--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---K--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....+++.||+|.+......   .  ...+..|+.+++.++   |+||+++++++.+....|+|||
T Consensus         6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e   82 (298)
T cd07841           6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK---HPNIIGLLDVFGHKSNINLVFE   82 (298)
T ss_pred             eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC---CCCChhhhheeecCCEEEEEEc
Confidence            3567888899999998888999999999765433   1  133556777777766   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+ +|+|.+++.+.+ .+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 ~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~  137 (298)
T cd07841          83 FM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS  137 (298)
T ss_pred             cc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC
Confidence            99 899999998775 7999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.70  E-value=2.5e-16  Score=124.34  Aligned_cols=121  Identities=22%  Similarity=0.280  Sum_probs=102.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....++..+|+|.+......+   ...+.+|+.+++.+.   |+||+++++++......+++|||+
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~~~~~~~v~e~~   84 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN---HPNVIKYYASFIEDNELNIVLELA   84 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc---CCchhhhhheeEeCCeEEEEEEec
Confidence            45678888999999988899999999887543222   245677888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|++|.+++..    ...+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~  142 (267)
T cd08229          85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT  142 (267)
T ss_pred             CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            99999999874    345899999999999999999999       899999999643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.70  E-value=2.8e-16  Score=125.48  Aligned_cols=122  Identities=21%  Similarity=0.318  Sum_probs=101.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-----CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES-----DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-----~~~~~lv  194 (249)
                      ..+|.|.++.+|++.+..+++.||+|.+......+  .....+|+.+++.+..++||||+++++++..     ...++++
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv   85 (288)
T cd07863           6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV   85 (288)
T ss_pred             eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence            45688899999999999999999999987643222  2346678888888876779999999998764     3568999


Q ss_pred             EeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++ ++|.+++.+.  ..+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        86 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~  143 (288)
T cd07863          86 FEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS  143 (288)
T ss_pred             Ecccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            99997 5999998764  24899999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.70  E-value=2.6e-16  Score=124.98  Aligned_cols=120  Identities=19%  Similarity=0.246  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..+|+|......... ...+.+|+.+++.+.   |+||+++++++......|+||||+++
T Consensus        10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06641          10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKDTKLWIIMEYLGG   86 (277)
T ss_pred             eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC---CCCEeEEEEEEEeCCeEEEEEEeCCC
Confidence            45788999999999888889999999886543222 245677888887776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++... .+++..+..++.+++.|+.|||       |++|+||++...
T Consensus        87 ~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~  137 (277)
T cd06641          87 GSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH  137 (277)
T ss_pred             CcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC
Confidence            9999999754 5899999999999999999999       999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=4.1e-16  Score=123.79  Aligned_cols=122  Identities=14%  Similarity=0.278  Sum_probs=105.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..||+|.+...... ....+.+|+.+++.+....|+|++++++++.....+|+||||++|
T Consensus         7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06917           7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEG   86 (277)
T ss_pred             hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCC
Confidence            4578889999999998889999999998754322 234577888888887655699999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|.+++... .+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        87 ~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~  136 (277)
T cd06917          87 GSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN  136 (277)
T ss_pred             CcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC
Confidence            9999998764 6999999999999999999999       89999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.69  E-value=3.5e-16  Score=124.70  Aligned_cols=120  Identities=21%  Similarity=0.262  Sum_probs=100.4

Q ss_pred             ccccCCCCcceeecc----CCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLL----SPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~----~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv  194 (249)
                      ..++.|.++.+|.+.    ...++..||+|.+....... ...+.+|+.+++.+.   |+||+++++++.+.  ...|+|
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv   86 (284)
T cd05079          10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY---HENIVKYKGICTEDGGNGIKLI   86 (284)
T ss_pred             eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC---CCCeeeeeeEEecCCCCceEEE
Confidence            467888899998775    45678899999986543222 256788888888776   99999999998775  679999


Q ss_pred             EeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++|++|.+++.+.. .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        87 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~  144 (284)
T cd05079          87 MEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES  144 (284)
T ss_pred             EEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC
Confidence            99999999999997653 5899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.69  E-value=3.3e-16  Score=125.94  Aligned_cols=120  Identities=23%  Similarity=0.301  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..||+|.+....... ...+.+|+.+++.++   |+||+++++++.+...+|+||||++ 
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~nI~~~~~~~~~~~~~~lv~e~~~-   87 (301)
T cd07873          12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK---HANIVTLHDIIHTEKSLTLVFEYLD-   87 (301)
T ss_pred             eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC---CCCcceEEEEEecCCeEEEEEeccc-
Confidence            46788999999999988899999999987543222 235667888888776   9999999999999999999999996 


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|.+++.+. +.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        88 ~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~  140 (301)
T cd07873          88 KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER  140 (301)
T ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC
Confidence            5999998764 45899999999999999999999       999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.69  E-value=3.1e-16  Score=123.17  Aligned_cols=118  Identities=19%  Similarity=0.243  Sum_probs=99.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..+|+|.+...... ...+.+|+.+++.+.   ||||+++++++......|++|||+++|
T Consensus        10 ~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~-~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05113          10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-EDEFIEEAKVMMKLS---HEKLVQLYGVCTKQRPIYIVTEYMSNG   84 (256)
T ss_pred             eEecCcccceEEEEEec-CCCcEEEEEcCCCccc-HHHHHHHHHHHhcCC---CCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence            45678888999987543 3456999988754322 255778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... ..+++..+..++.|++.|+.|||       |+||.||++..
T Consensus        85 ~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~  135 (256)
T cd05113          85 CLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD  135 (256)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence            999999874 35899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.69  E-value=2.7e-16  Score=124.38  Aligned_cols=120  Identities=18%  Similarity=0.268  Sum_probs=101.1

Q ss_pred             ccccCCCCcceeeccCCCCCC---eeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ---HVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....+++   .||+|.+.... ....+.+..|+.+++.+.   ||||+++++++.+....++||||
T Consensus        10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv~e~   86 (269)
T cd05065          10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD---HPNIIHLEGVVTKSRPVMIITEF   86 (269)
T ss_pred             eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC---CcCcceEEEEECCCCceEEEEec
Confidence            456888899999887665554   69999986542 222356788888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|+|.+++... +.+++.++..++.|++.|+.|||       |+||+||++..
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~  141 (269)
T cd05065          87 MENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS  141 (269)
T ss_pred             CCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC
Confidence            9999999999864 46899999999999999999999       99999999853

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.69  E-value=3.5e-16  Score=125.88  Aligned_cols=121  Identities=18%  Similarity=0.270  Sum_probs=100.0

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+..     ..++..+|+|.+....... .+.+.+|+.+++.+.  +|+||+++++++......|++|
T Consensus        41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~lv~  118 (302)
T cd05055          41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG--NHENIVNLLGACTIGGPILVIT  118 (302)
T ss_pred             ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc--CCCCcceEEEEEecCCceEEEE
Confidence            4567888888887642     3456789999887543222 245778999888872  3999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++++..  .+++.++..++.+++.|+.|||       |+||+|||+..
T Consensus       119 e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~  176 (302)
T cd05055         119 EYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH  176 (302)
T ss_pred             EcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC
Confidence            9999999999998643  3899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.69  E-value=1.6e-16  Score=126.16  Aligned_cols=119  Identities=18%  Similarity=0.229  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..||+|.+....... .+.+.+|+.+++.+.   |+||+++++++......|+||||+++
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD---SPYITRYYGSYLKGTKLWIIMEYLGG   86 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCC---CCccHhhhcccccCCceEEEEEccCC
Confidence            45678889999999888889999999987543222 245778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|.+++..+ .+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        87 ~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~  136 (277)
T cd06642          87 GSALDLLKPG-PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE  136 (277)
T ss_pred             CcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC
Confidence            9999998754 5899999999999999999999       99999999975

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.69  E-value=2.6e-16  Score=126.07  Aligned_cols=119  Identities=21%  Similarity=0.319  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..||+|.+........+.+.+|+.+++.+.   ||||+++++.+......|+|+||+++|
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~---hp~i~~~~~~~~~~~~~~lv~e~~~~~  101 (293)
T cd06647          25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK---HPNIVNYLDSYLVGDELWVVMEYLAGG  101 (293)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC---CCCeeehhheeeeCCcEEEEEecCCCC
Confidence            35678889999999888889999999986544433456778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. .+++.++..++.|++.|+.|||       |++|+||++..
T Consensus       102 ~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~  150 (293)
T cd06647         102 SLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM  150 (293)
T ss_pred             cHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC
Confidence            999999765 4899999999999999999999       89999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.69  E-value=3.4e-16  Score=123.17  Aligned_cols=119  Identities=20%  Similarity=0.298  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.+|.+.. ..+..||+|.+..... ..+.+.+|+.+++.++   |+||+++++++......|++|||+++|
T Consensus        12 ~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (261)
T cd05072          12 KKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQ---HDKLVRLYAVVTKEEPIYIITEYMAKG   86 (261)
T ss_pred             eecCCcCCceEEEEEe-cCCceEEEEEccCCch-hHHHHHHHHHHHHhCC---CCCeeeEEEEEcCCCCcEEEEecCCCC
Confidence            4678888999998875 4567799998865432 2356788999988876   999999999999999999999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.  ..+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~  139 (261)
T cd05072          87 SLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSES  139 (261)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCC
Confidence            999999764  45888999999999999999999       999999999754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.69  E-value=4.5e-16  Score=124.43  Aligned_cols=122  Identities=20%  Similarity=0.259  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCC-CCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-----eCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-APSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKE-----SDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-----~~~~~~l  193 (249)
                      ..+|.|.+|.+|++.+. ..+..||+|.+.......  .....+|+.+++.+..++||||+++++++.     ....+|+
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~l   86 (290)
T cd07862           7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   86 (290)
T ss_pred             eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEE
Confidence            45788999999999874 456889999987543322  235667888888887677999999999875     3456999


Q ss_pred             EEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||++ ++|.+++...  ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        87 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~  145 (290)
T cd07862          87 VFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS  145 (290)
T ss_pred             EEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC
Confidence            999996 6999999764  34899999999999999999999       99999999964

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.69  E-value=3.6e-16  Score=124.48  Aligned_cols=120  Identities=21%  Similarity=0.277  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCCCCC-----CeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS-----QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~-----~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+.....+     ..||+|.+....... ...+.+|+..++.++   ||||+++++++.+....|++|
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~---h~~i~~~~~~~~~~~~~~~~~   87 (283)
T cd05048          11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ---HPNIVCLLGVCTKEQPTCMLF   87 (283)
T ss_pred             hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC---CcccceEEEEEcCCCceEEEE
Confidence            45778888999988754443     679999887543222 245778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++.+.                ..+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          88 EYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             ecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            999999999999865                34788899999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.69  E-value=3.4e-16  Score=124.44  Aligned_cols=120  Identities=19%  Similarity=0.281  Sum_probs=101.5

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+...     .++..||+|.+...... ..+.+.+|+.+++.+.   |+||+++++++......|+||
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~   87 (280)
T cd05049          11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ---HENIVKFYGVCTEGDPPIMVF   87 (280)
T ss_pred             hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC---CCCchheeeEEecCCCeEEEE
Confidence            45788889999987653     34678999998765433 2356888999888877   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG--------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++||+|.+++...+              .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~  157 (280)
T cd05049          88 EYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY  157 (280)
T ss_pred             ecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence            9999999999998653              3788899999999999999999       89999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.69  E-value=4.1e-16  Score=122.59  Aligned_cols=118  Identities=19%  Similarity=0.293  Sum_probs=96.6

Q ss_pred             ccCCCCcceeeccC--CCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLS--PAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ++.|.++.+|.+..  ...+..||+|.+....... .+.+.+|+.+++.+.   |+||+++++++. ....++||||+++
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~---h~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD---NPYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC---CCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            56788889987643  3456679999886543221 245778999998876   999999999875 4578999999999


Q ss_pred             CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++.. .+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~  131 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ  131 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC
Confidence            999999985 346899999999999999999999       999999998654

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.69  E-value=3.4e-16  Score=124.35  Aligned_cols=120  Identities=17%  Similarity=0.238  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCC-----CCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-----PSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-----~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+....     .+..||+|.+....... ...+.+|+.+++.++   |+||+++++++.+....|+||
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~   88 (277)
T cd05036          12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN---HQNIVRLIGVSFERLPRFILL   88 (277)
T ss_pred             eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEccCCCcEEEE
Confidence            456888899999887765     67889999886443222 245778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG-------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++||+|.+++.+.+       .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        89 e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~  151 (277)
T cd05036          89 ELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTC  151 (277)
T ss_pred             ecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEec
Confidence            9999999999998764       4888999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.69  E-value=5.2e-16  Score=122.41  Aligned_cols=120  Identities=23%  Similarity=0.294  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.||+|.+......+   .+.+.+|+.+++.++   |+||+++++++......++||||+
T Consensus         8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~   84 (267)
T cd08224           8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD---HPNVIKYLASFIENNELNIVLELA   84 (267)
T ss_pred             eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC---CCCeeeeeeeeecCCeEEEEEecC
Confidence            35678889999999998899999999887432221   345778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++.+    +..+++..+..++.+++.|+.|||       |++|+||++..
T Consensus        85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~  141 (267)
T cd08224          85 DAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA  141 (267)
T ss_pred             CCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC
Confidence            99999999864    235899999999999999999999       89999999965

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.69  E-value=4.6e-16  Score=122.25  Aligned_cols=118  Identities=18%  Similarity=0.272  Sum_probs=97.8

Q ss_pred             cccCCCCcceeecc--CCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLL--SPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~--~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++.|.++.+|.+.  ...++..+|+|++.......  .+.+..|+.+++.+.   |+||+++++++. ....++||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~-~~~~~lv~e~~   77 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD---NPYIVRMIGICE-AESWMLVMELA   77 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC---CCCcceEEEEEc-CCCcEEEEecC
Confidence            35778889999874  34567889999986443221  245778888888776   999999999875 45679999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++.+.+.+++..+..++.|++.|+.|||       |+||.||++..
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~  130 (257)
T cd05116          78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT  130 (257)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC
Confidence            99999999988888999999999999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.69  E-value=4.1e-16  Score=122.29  Aligned_cols=121  Identities=23%  Similarity=0.300  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCC----CeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS----QHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+.....+    ..+|+|.+...... ..+.+..|+..++.+.   |+||+++++.+.+.+..|++||
T Consensus         5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD---HPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC---CCchheEEEEEcCCCeeEEEEe
Confidence            45678889999998887655    88999999755432 2356788888888776   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+++++|.+++.....  +++..+..++.|++.|+.|||       |++|+||++...
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~  139 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGEN  139 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccC
Confidence            9999999999987544  899999999999999999999       999999999754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.69  E-value=4.2e-16  Score=124.00  Aligned_cols=116  Identities=14%  Similarity=0.176  Sum_probs=99.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+.+..++..||+|.+...... ..+.+.+|+.+++.+.   ||||+++++.+......++||||+++
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~   83 (279)
T cd06619           7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD---SPYIIGFYGAFFVENRISICTEFMDG   83 (279)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC---CCCeeeEEEEEEECCEEEEEEecCCC
Confidence            3567888999999999899999999998764322 2245778888887776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|..+    +.+++..+..++.|++.|+.|||       |+||.|||+..
T Consensus        84 ~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~  130 (279)
T cd06619          84 GSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT  130 (279)
T ss_pred             CChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC
Confidence            998654    24889999999999999999999       99999999964

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.69  E-value=3.1e-16  Score=126.80  Aligned_cols=113  Identities=20%  Similarity=0.202  Sum_probs=96.6

Q ss_pred             CcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHH
Q psy4166         129 PRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY  206 (249)
Q Consensus       129 ~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~  206 (249)
                      .+.++.+....+++.||+|++.....  .....+.+|+..++.++   |+||+++++++.+....|++|||+++|+|.++
T Consensus        13 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~   89 (314)
T cd08216          13 LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ---HPNILPYVTSFIVDSELYVVSPLMAYGSCEDL   89 (314)
T ss_pred             CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC---CcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence            35566666677899999999976522  22356788888888876   99999999999999999999999999999999


Q ss_pred             HHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         207 LVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       207 l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +.+.  ..+++..+..++.|++.|+.|||       |+||+||+|..
T Consensus        90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~  136 (314)
T cd08216          90 LKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG  136 (314)
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec
Confidence            9864  35889999999999999999999       99999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.69  E-value=4.6e-16  Score=124.40  Aligned_cols=120  Identities=27%  Similarity=0.316  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....+++.||+|.+....... ...+.+|+.+++.++   |+||+++++++.+....|+||||+. 
T Consensus        11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~-   86 (291)
T cd07844          11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK---HANIVTLHDIIHTKKTLTLVFEYLD-   86 (291)
T ss_pred             EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC---CcceeeEEEEEecCCeEEEEEecCC-
Confidence            46788889999999988889999999987543222 234567888888776   9999999999999999999999997 


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|.+++.+. +.+++..++.++.|++.|+.|||       |+||+||++..+
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~  139 (291)
T cd07844          87 TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER  139 (291)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC
Confidence            4999998764 46899999999999999999999       899999999653

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.69  E-value=4.1e-16  Score=124.10  Aligned_cols=120  Identities=18%  Similarity=0.256  Sum_probs=101.6

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|+++.+|.+.     ...++..+|+|.+..........+.+|+++++.++   |+||+++++++.+....|++||
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e   87 (280)
T cd05092          11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ---HQHIVRFYGVCTEGRPLLMVFE   87 (280)
T ss_pred             cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC---CCCCceEEEEEecCCceEEEEe
Confidence            456778889998774     33457789999887654444466888999888877   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKG---------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++.+.+               .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~  157 (280)
T cd05092          88 YMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ  157 (280)
T ss_pred             cCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence            999999999998753               3788999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.68  E-value=5.4e-16  Score=123.55  Aligned_cols=121  Identities=22%  Similarity=0.263  Sum_probs=99.6

Q ss_pred             ccccCCCCcceeeccC----CCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLS----PAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~----~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+..    ...+..+|+|.+....... ...+.+|+.+++.+.   |+||+++++++......|++||
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e   87 (283)
T cd05090          11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH---HPNIVCLLGVVTQEQPVCMLFE   87 (283)
T ss_pred             eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC---CCCeeeEEEEEecCCceEEEEE
Confidence            4567888999998763    3466889999987533222 245778888888876   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKG-----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+++|+|.+++..+.                 .+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~  160 (283)
T cd05090          88 YLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ  160 (283)
T ss_pred             cCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence            999999999996432                 3778889999999999999999       999999999643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.68  E-value=5.2e-16  Score=122.49  Aligned_cols=120  Identities=18%  Similarity=0.236  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....   +...||+|.+....... ...+.+|+.+++.++   |+||+++++.+......|++|||
T Consensus        10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~iv~e~   86 (266)
T cd05033          10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD---HPNIIRLEGVVTKSRPVMIITEY   86 (266)
T ss_pred             eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC---CCCcceEeEEEecCCceEEEEEc
Confidence            467888899999876543   35679999887543222 345778888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~  141 (266)
T cd05033          87 MENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS  141 (266)
T ss_pred             CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC
Confidence            9999999999874 46899999999999999999999       89999999964

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.68  E-value=6.5e-16  Score=123.07  Aligned_cols=119  Identities=28%  Similarity=0.386  Sum_probs=98.0

Q ss_pred             ccccCCCCcceeec----cCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLL----LSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~----~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv  194 (249)
                      ..++.|.++.++++    ....++..||+|.+...... ....+.+|+.+++.++   ||||+++++++..  ...+|++
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080          10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY---HENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC---CCCEeeEEEEEecCCCceEEEE
Confidence            45677888888654    34457889999998754321 2355778988888876   9999999998765  3468999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++|+|.+++.+.. +++.++..++.|++.|+.|||       |+||+||++..
T Consensus        87 ~e~~~~~~l~~~~~~~~-l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~  142 (283)
T cd05080          87 MEYVPLGSLRDYLPKHK-LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN  142 (283)
T ss_pred             ecCCCCCCHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC
Confidence            99999999999998764 999999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0603|consensus

Probab=99.68  E-value=5.2e-17  Score=135.30  Aligned_cols=79  Identities=28%  Similarity=0.511  Sum_probs=66.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..+|+.+|||||||++||+|++|+.||...... ++..   +...  +.+...+|.++++|+.+||+.||.+|+++.++.
T Consensus       487 ~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~---~i~~--~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~  561 (612)
T KOG0603|consen  487 IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT---RIQM--PKFSECVSDEAKDLLQQLLQVDPALRLGADEIG  561 (612)
T ss_pred             cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH---hhcC--CccccccCHHHHHHHHHhccCChhhCcChhhhc
Confidence            468999999999999999999999999877665 3322   2222  223367999999999999999999999999999


Q ss_pred             cCCCC
Q psy4166          81 AHPFL   85 (249)
Q Consensus        81 ~~~~~   85 (249)
                      .|+|+
T Consensus       562 ~h~w~  566 (612)
T KOG0603|consen  562 AHPWF  566 (612)
T ss_pred             cCcch
Confidence            99999

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.68  E-value=4e-16  Score=124.75  Aligned_cols=121  Identities=18%  Similarity=0.265  Sum_probs=102.6

Q ss_pred             ccccCCCCcceeeccCC---CCCCeeEEEEeecccccc----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP---APSQHVAIKRITKKNLAK----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~~~~----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..++.|.++.+|.+...   .++..||+|++.......    .+.+.+|+.+++.+.  +|+||+++++++......|+|
T Consensus         6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv   83 (290)
T cd05613           6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR--QSPFLVTLHYAFQTDTKLHLI   83 (290)
T ss_pred             eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc--cCCChhceeeEeecCCeEEEE
Confidence            45678888999887653   478899999997643221    245677888888774  599999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++++|.+++...+.+++..+..++.|++.|+.|||       |++|+|||+..
T Consensus        84 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~  140 (290)
T cd05613          84 LDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS  140 (290)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC
Confidence            999999999999998888999999999999999999999       99999999954

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.68  E-value=6e-16  Score=123.50  Aligned_cols=119  Identities=18%  Similarity=0.320  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....+++.+|+|.+........+.+.+|+.+++.+.   |+||+++++++......|+++||++|+
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~---h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ---HPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC---CCChheEEEEEEcCCeEEEEEeccCCC
Confidence            46778888999999888889999999986544333455778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.. +.+++.++..++.|++.|+.|||       |++|+||++..
T Consensus       102 ~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~  150 (285)
T cd06648         102 ALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS  150 (285)
T ss_pred             CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC
Confidence            99999987 56999999999999999999999       99999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.68  E-value=6.5e-16  Score=123.22  Aligned_cols=120  Identities=23%  Similarity=0.326  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-----eCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE-----SDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-----~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....+++.+|+|.+...... ...+..|+.+++.+.  +|+||+++++++.     .....|+|||
T Consensus        24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~e~~~l~~l~--~h~~i~~~~~~~~~~~~~~~~~~~lv~e  100 (286)
T cd06638          24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-DEEIEAEYNILKALS--DHPNVVKFYGMYYKKDVKNGDQLWLVLE  100 (286)
T ss_pred             eeeccCCCcEEEEEEECCCCceeEEEeeccccch-HHHHHHHHHHHHHHh--cCCCeeeeeeeeeecccCCCCeEEEEEe
Confidence            4678899999999999889999999988653222 245677888888773  4999999999874     3457999999


Q ss_pred             ccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |++||+|.+++..    ...+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~  159 (286)
T cd06638         101 LCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT  159 (286)
T ss_pred             ecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC
Confidence            9999999998763    245889999999999999999999       89999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=5.6e-16  Score=121.71  Aligned_cols=118  Identities=19%  Similarity=0.289  Sum_probs=98.6

Q ss_pred             cccCCCCcceeeccCCCCC---CeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPS---QHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~---~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.++.++++....++   ..+|+|.+...... ..+.+.+|+.+++.+.   |+||+++++++. ...+++||||+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD---HPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcC---CCCeeeEEEEEc-CCceEEEEEeC
Confidence            3577888999887654433   78999998765442 2356778888888776   999999999876 45689999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~  130 (257)
T cd05060          78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN  130 (257)
T ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC
Confidence            99999999998878999999999999999999999       99999999854

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.68  E-value=5.5e-16  Score=123.52  Aligned_cols=119  Identities=25%  Similarity=0.323  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..||+|.+.......  ...+.+|+.+++.+.   ||||+++++++.+...+|+||||++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~   82 (285)
T cd07861           6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ---HPNIVCLQDVLMQESRLYLIFEFLS   82 (285)
T ss_pred             eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC---CCCEeeeEEEEeeCCeEEEEEecCC
Confidence            35677888999999988899999999987543222  245678888888777   9999999999999999999999997


Q ss_pred             CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK---GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|.+++...   +.+++..++.++.|++.|+.|||       |++|+||++..
T Consensus        83 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~  136 (285)
T cd07861          83 -MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN  136 (285)
T ss_pred             -CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC
Confidence             6999988753   45899999999999999999999       89999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.68  E-value=5e-16  Score=122.30  Aligned_cols=120  Identities=22%  Similarity=0.368  Sum_probs=106.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....+++.+|+|.+......  ..+.+..|+.+++.+.   |+||+++++.+.+...+++|+||++
T Consensus         6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06626           6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK---HPNLVKYYGVEVHREKVYIFMEYCS   82 (264)
T ss_pred             eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC---CCChhheeeeEecCCEEEEEEecCC
Confidence            4568888999999988888999999999866443  2356778888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+.+.+++..+..++.+++.|+.|||       |++|+||++..
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~  134 (264)
T cd06626          83 GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH  134 (264)
T ss_pred             CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            9999999998877899999999999999999999       89999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.68  E-value=3.6e-16  Score=125.21  Aligned_cols=119  Identities=20%  Similarity=0.307  Sum_probs=103.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..||+|.+..........+.+|+.+++.+.   |+||+++++++...+..|++|||++++
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ---HENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC---CcchhheeeEEEeCCEEEEEEecCCCC
Confidence            35788899999999888899999999986543333355778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... .+++..+..++.|++.|+.|||       |++|+||++..
T Consensus       103 ~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~  151 (292)
T cd06657         103 ALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH  151 (292)
T ss_pred             cHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence            999987654 5899999999999999999999       99999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.68  E-value=6.6e-16  Score=122.24  Aligned_cols=120  Identities=23%  Similarity=0.311  Sum_probs=98.8

Q ss_pred             cccCCCCcceeeccCCCCCC--eeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQ--HVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~--~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .++.|.++.+|.+....++.  .+|+|.+...... ..+.+.+|+.++..+.  +||||+++++++...+.+|++|||++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc--cCCCeeeEEEEEecCCCceEEEEeCC
Confidence            35778889999988766665  4688887643222 2245778888888773  49999999999999999999999999


Q ss_pred             CCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|+|.+++...+                .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~  147 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  147 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC
Confidence            999999998643                3788999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=5.2e-16  Score=122.17  Aligned_cols=118  Identities=18%  Similarity=0.231  Sum_probs=100.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..||+|.+..... ..+.+.+|+.+++.++   |+||+++++++......|++|||++++
T Consensus        12 ~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (261)
T cd05068          12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLR---HPKLIQLYAVCTLEEPIYIVTELMKYG   86 (261)
T ss_pred             EEecccCCccEEEEEec-CCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCC---CCCccceeEEEecCCCeeeeeecccCC
Confidence            45778888999988753 457899999875432 2356778888888876   999999999999999999999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++....  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        87 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~  138 (261)
T cd05068          87 SLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE  138 (261)
T ss_pred             cHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC
Confidence            9999998754  5899999999999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.68  E-value=9.7e-16  Score=122.27  Aligned_cols=120  Identities=20%  Similarity=0.295  Sum_probs=105.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ...+.|.++.+|.+.+..++..+|+|.+..... ..+.+.+|+..++.+.   |+||+++++++......|+++||++|+
T Consensus        25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~~  100 (286)
T cd06614          25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCK---HPNIVDYYDSYLVGDELWVVMEYMDGG  100 (286)
T ss_pred             HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCC---CCCeeEEEEEEEECCEEEEEEeccCCC
Confidence            456778889999999888899999999976543 3356778888887776   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...+ .+++..+..++.|++.|+.|||       |++|+||++..+
T Consensus       101 ~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~  152 (286)
T cd06614         101 SLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD  152 (286)
T ss_pred             cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC
Confidence            9999999876 7999999999999999999999       999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.68  E-value=6.6e-16  Score=120.79  Aligned_cols=118  Identities=21%  Similarity=0.250  Sum_probs=101.9

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      .++.|.++.+|.+.... ++.||+|.+...... ....+.+|+.+++.+.   |+||+++++++.+....|+||||++|+
T Consensus         2 ~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           2 KIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD---HPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             ccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            35778889999998776 999999998765433 2356788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. ..+++..+..++.+++.|+.|||       |++|+||++..
T Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~  128 (251)
T cd05041          78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE  128 (251)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC
Confidence            999999764 45889999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.68  E-value=6.5e-16  Score=125.09  Aligned_cols=117  Identities=21%  Similarity=0.281  Sum_probs=96.5

Q ss_pred             ccccCCCCcceeeccCC--CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSP--APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||++...  .+++.||+|.+.....  .....+|+.+++.++   ||||+++++.+..  ...+|++|||
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELK---HPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcC---CCCCcceeeeEecCCCcEEEEEEec
Confidence            46788999999999854  4678999999865432  245678999998887   9999999999854  5679999999


Q ss_pred             cCCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK---------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +. ++|.+++...         ..+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~  143 (317)
T cd07868          82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG  143 (317)
T ss_pred             cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEec
Confidence            95 5999888642         14889999999999999999999       99999999953

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.68  E-value=6.6e-16  Score=123.01  Aligned_cols=120  Identities=23%  Similarity=0.336  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+.+..++..||+|.+....... ...+.+|+.+++.++   |+||+++++++.+.+..|+||||+++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (284)
T cd07836           6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK---HENIVRLHDVIHTENKLMLVFEYMDK   82 (284)
T ss_pred             eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc---CCCEeeeeeeEeeCCcEEEEEecCCc
Confidence            45678888999999998899999999997653322 245667888888776   99999999999999999999999975


Q ss_pred             CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG---TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       +|.+++...+   .+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        83 -~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~  136 (284)
T cd07836          83 -DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR  136 (284)
T ss_pred             -cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence             8999887643   5899999999999999999999       999999999753

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.68  E-value=5.6e-16  Score=122.52  Aligned_cols=119  Identities=16%  Similarity=0.131  Sum_probs=94.7

Q ss_pred             cccCCCCcceeeccC--CCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLS--PAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.++.+|.+..  ......+++|.+..... ...+.+.+|+.+++.++   ||||+++++.+.+....|+||||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~   78 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQ---HPNILQCLGQCVEAIPYLLVFEYCE   78 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccC---CcchhheEEEecCCCccEEEEecCC
Confidence            467788899988753  22344566777654332 22356778888887776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|+|.+++.+.+    .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~  134 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS  134 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC
Confidence            999999998642    3567778899999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.68  E-value=5.8e-16  Score=122.33  Aligned_cols=120  Identities=19%  Similarity=0.269  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCCCCC---eeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ---HVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~---~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....++.   .+|+|.+..... ...+.+..|+.+++.+.   |+||+++.+++.+.+..|+||||
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~   87 (268)
T cd05063          11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS---HHNIIRLEGVVTKFKPAMIITEY   87 (268)
T ss_pred             eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC---CCCeeEEEEEEccCCCcEEEEEc
Confidence            457888889999887655443   799998865422 22355778888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++++|.+++... +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~  142 (268)
T cd05063          88 MENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS  142 (268)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC
Confidence            9999999999764 56899999999999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.68  E-value=5.7e-16  Score=123.95  Aligned_cols=120  Identities=19%  Similarity=0.280  Sum_probs=100.2

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+...     .++..+++|.+........+.+.+|+..++.+.   |+||+++++++......++|||
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e   87 (291)
T cd05094          11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ---HEHIVKFYGVCGDGDPLIMVFE   87 (291)
T ss_pred             eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC---CCCcceEEEEEccCCceEEEEe
Confidence            35677888899887632     345678999886554444456788888888776   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++++|.+++...+                .+++..+..++.|++.|+.|||       |+||.|||+..
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~  158 (291)
T cd05094          88 YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA  158 (291)
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence            999999999997643                3788999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.68  E-value=4.7e-16  Score=131.25  Aligned_cols=114  Identities=21%  Similarity=0.297  Sum_probs=95.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD--------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--------~~~~l  193 (249)
                      ..+|.|.+|.||.+....+++.||+|++....    ....+|+.+++.+.   |+||+++++++...        ..+++
T Consensus        72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~---h~niv~l~~~~~~~~~~~~~~~~~l~l  144 (440)
T PTZ00036         72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLN---HINIIFLKDYYYTECFKKNEKNIFLNV  144 (440)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcC---CCCCcceeeeEeecccccCCCceEEEE
Confidence            46788999999999998899999999885432    33457888888876   99999999887542        25789


Q ss_pred             EEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         194 VMEFCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||||++ ++|.+++..    .+.+++..++.++.|++.||.|||       |+||+||||.
T Consensus       145 vmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~  204 (440)
T PTZ00036        145 VMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID  204 (440)
T ss_pred             EEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence            999997 578777753    356999999999999999999999       9999999996

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.68  E-value=7.6e-16  Score=123.42  Aligned_cols=121  Identities=21%  Similarity=0.268  Sum_probs=101.4

Q ss_pred             ccccCCCCcceeeccCCCC----------------CCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAP----------------SQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHC  184 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~----------------~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~  184 (249)
                      ..+|.|.+|.+|.+.....                +..||+|.+...... ..+.+.+|+++++.++   |+||++++++
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~   87 (296)
T cd05051          11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS---DPNIARLLGV   87 (296)
T ss_pred             ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC---CCCEeEEEEE
Confidence            4678888889887665432                356899998754322 2356778899888887   9999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         185 KESDQHVYLVMEFCNGGDLADYLVSKG-----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       185 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +......+++|||+++++|.+++.+..           .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~  166 (296)
T cd05051          88 CTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             EecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC
Confidence            999999999999999999999998765           6899999999999999999999       999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG4279|consensus

Probab=99.68  E-value=1.6e-16  Score=133.95  Aligned_cols=121  Identities=26%  Similarity=0.329  Sum_probs=108.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      +.|.|.+|.||.+.+..+..+.|+|.+....-...+....|+.+++.+.   |.|||+++|++..+++.-|.||-.+||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr---HkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR---HKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh---hHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            4688999999999999999999999998654444577889999999998   9999999999999999999999999999


Q ss_pred             HHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHhh-------cCCccceeeeeccc
Q psy4166         203 LADYLVSK-GTL--SEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTIS  247 (249)
Q Consensus       203 L~~~l~~~-~~~--~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~~  247 (249)
                      |.++++.. |++  +|..+.+|.+||+.|+.|||       |||-.|+|| ||-|
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLv-NTyS  712 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLV-NTYS  712 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEE-eecc
Confidence            99999986 666  79999999999999999999       999999876 4444

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.67  E-value=8.2e-16  Score=120.64  Aligned_cols=120  Identities=21%  Similarity=0.359  Sum_probs=103.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ...+.|.++.++.+....+++.||+|++.......  .+.+.+|+.+++.++   |+||+++++++......|+||||++
T Consensus         6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08218           6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK---HPNIVQYQESFEENGNLYIVMDYCE   82 (256)
T ss_pred             EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC---CCCeeeeEeeecCCCeEEEEEecCC
Confidence            45788889999999888899999999987543222  245778888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++....  .+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~  136 (256)
T cd08218          83 GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK  136 (256)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence            999999997643  4789999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.67  E-value=2.4e-16  Score=124.06  Aligned_cols=120  Identities=28%  Similarity=0.382  Sum_probs=97.4

Q ss_pred             ccccCCCCcceeeccCC----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSP----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.++.+...    ..+..|++|.+...... ..+.+.+|++.++.++   ||||+++++++...+.+++|||
T Consensus         5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR---HPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS---BTTBE-EEEEEESSSSEEEEEE
T ss_pred             eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc---cccccccccccccccccccccc
Confidence            45788889999877654    45678999999543222 2466788888888776   9999999999998888999999


Q ss_pred             ccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++|+|.++|...  ..+++..+..++.|++.|+.|||       +++|.||++..
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~  138 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS  138 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999987  56999999999999999999999       88999998863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.67  E-value=6.6e-16  Score=121.06  Aligned_cols=120  Identities=28%  Similarity=0.350  Sum_probs=103.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..+|+|.+.......  .+.+.+|+.+++.++   |+||+++++.+.....+++||||++
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08220           6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS---HPNIIEYYENFLEDKALMIVMEYAP   82 (256)
T ss_pred             EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC---CCchhheeeeEecCCEEEEEEecCC
Confidence            45678888999999888899999999997653222  356778888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |++|.+++.+..  .+++..+..++.+++.|+.|||       |++|+||++..
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~  136 (256)
T cd08220          83 GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK  136 (256)
T ss_pred             CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            999999998743  4889999999999999999999       89999999963

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.67  E-value=6.6e-16  Score=123.10  Aligned_cols=119  Identities=22%  Similarity=0.314  Sum_probs=103.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..||+|++.......  ...+.+|+.+++.+.   |+||+++++++.....+|+||||+ 
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~~v~e~~-   81 (286)
T cd07832           6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ---HPYVVKLLDVFPHGSGFVLVMEYM-   81 (286)
T ss_pred             eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC---CCCCcceeeEEecCCeeEEEeccc-
Confidence            45688889999999988889999999987654322  356778888888776   999999999999999999999999 


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++... +.+++.+++.++.|++.|+.|||       |+||+||++..
T Consensus        82 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~  134 (286)
T cd07832          82 PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA  134 (286)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC
Confidence            99999999764 46899999999999999999999       99999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.67  E-value=5e-16  Score=127.17  Aligned_cols=121  Identities=21%  Similarity=0.276  Sum_probs=97.7

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv  194 (249)
                      ..+|.|.+|.||.+.     ...+++.||+|.+....... ...+.+|+.++..+.  +|+||+++++++.. ...++++
T Consensus        13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~~~~~~~~~~~~~~lv   90 (343)
T cd05103          13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVI   90 (343)
T ss_pred             ccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc--CCccHhhhcceeecCCCceEEE
Confidence            467889999999886     34567899999997543222 245778888888874  48999999998764 4568999


Q ss_pred             EeccCCCCHHHHHHhcC---------------------------------------------------------------
Q psy4166         195 MEFCNGGDLADYLVSKG---------------------------------------------------------------  211 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~---------------------------------------------------------------  211 (249)
                      ||||++|+|.+++...+                                                               
T Consensus        91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
T cd05103          91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED  170 (343)
T ss_pred             EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence            99999999999997532                                                               


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         212 ----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       212 ----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                          .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       171 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~  214 (343)
T cd05103         171 LYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  214 (343)
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC
Confidence                2567788889999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=9e-16  Score=120.05  Aligned_cols=120  Identities=21%  Similarity=0.368  Sum_probs=105.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+.....++.||+|.+......  ....+.+|+.+++.+.   |+|++++++++.+...+|++|||++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e~~~   82 (254)
T cd06627           6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK---HPNIVKYIGSIETSDSLYIILEYAE   82 (254)
T ss_pred             eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC---CCCccEEEEEEEeCCEEEEEEecCC
Confidence            4567888899999988888999999999876442  2345777888877776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 ~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~  134 (254)
T cd06627          83 NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK  134 (254)
T ss_pred             CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC
Confidence            9999999998888999999999999999999999       99999999975

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.67  E-value=1.1e-15  Score=120.78  Aligned_cols=120  Identities=21%  Similarity=0.321  Sum_probs=102.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-----KTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv  194 (249)
                      ..++.|.++.+|.+.+..++..||+|.+......     ....+.+|+.+++.++   |+||+++++++.+  ...++++
T Consensus         8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~~l~   84 (266)
T cd06651           8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ---HERIVQYYGCLRDRAEKTLTIF   84 (266)
T ss_pred             ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC---CCCeeeEEEEEEcCCCCEEEEE
Confidence            4678899999999999889999999998754221     1134677888888776   9999999999875  4678999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++++|.+++.+.+.+++.....++.|++.|+.|||       |++|+||++..
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~  141 (266)
T cd06651          85 MEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS  141 (266)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence            999999999999998778999999999999999999999       99999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=2.5e-16  Score=126.06  Aligned_cols=88  Identities=17%  Similarity=0.308  Sum_probs=73.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+...   ....+..++..+++||++||+.||.+|++     +
T Consensus       172 ~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~  248 (291)
T cd05612         172 SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG---KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGA  248 (291)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCH
Confidence            456889999999999999999999999988776655544333   23445667899999999999999999995     9


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      ++++.|+||....+..
T Consensus       249 ~~~l~h~~~~~~~~~~  264 (291)
T cd05612         249 DDVKNHRWFKSVDWDD  264 (291)
T ss_pred             HHHhcCccccCCCHHH
Confidence            9999999998776654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.67  E-value=2.1e-16  Score=125.99  Aligned_cols=120  Identities=26%  Similarity=0.297  Sum_probs=103.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....+++.||+|.+.+.....  .+.+.+|+.+++.+.   |+||+++++++.+....|+||||++
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~   83 (286)
T cd07846           7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR---HENLVNLIEVFRRKKRLYLVFEFVD   83 (286)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC---CcchhhHHHhcccCCeEEEEEecCC
Confidence            45788889999999988889999999886543222  245677888887776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.++....+.+++.++..++.|++.|+.|||       |++|+||++..
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~  135 (286)
T cd07846          84 HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ  135 (286)
T ss_pred             ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence            9999888877667999999999999999999999       89999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.67  E-value=8.9e-16  Score=120.84  Aligned_cols=120  Identities=18%  Similarity=0.248  Sum_probs=105.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.++.+....+++.||+|++..... ...+.+.+|+..+..++   |+||+++++++.....+|+||||+++
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (264)
T cd06623           7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE---SPYVVKCYGAFYKEGEISIVLEYMDG   83 (264)
T ss_pred             eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC---CCCeeeEEEEEccCCeEEEEEEecCC
Confidence            456778889999999988999999999876543 22356778888888777   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhc--------CCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD--------FTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylhd--------~kp~nili~~  244 (249)
                      ++|.+++.+.+.+++..+..++.|++.|+.|||+        ++|+||++..
T Consensus        84 ~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~  135 (264)
T cd06623          84 GSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS  135 (264)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC
Confidence            9999999987889999999999999999999995        8999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=8.5e-16  Score=121.82  Aligned_cols=119  Identities=19%  Similarity=0.300  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..+|+|.+.... ......+.+|+.+++.++   |+||+++++++.+...+|+|+||+++
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR---SPYITKYYGSFLKGSKLWIIMEYCGG   83 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC---CCCeeeeeEEEEECCeEEEEEEeeCC
Confidence            35677888999999988899999999987543 222345678888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|.+++..+ .+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        84 ~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~  133 (274)
T cd06609          84 GSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE  133 (274)
T ss_pred             CcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC
Confidence            9999999876 6999999999999999999999       99999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.67  E-value=5.1e-16  Score=132.70  Aligned_cols=120  Identities=14%  Similarity=0.187  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--------eE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ--------HV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--------~~  191 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.......  ...+.+|+..+..+.   |+||++++..+....        .+
T Consensus        38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~---h~~iv~~~~~~~~~~~~~~~~~~~i  114 (496)
T PTZ00283         38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD---FFSIVKCHEDFAKKDPRNPENVLMI  114 (496)
T ss_pred             EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC---CCcEEEeecceecccccCcccceEE
Confidence            46888999999999988899999999997653322  244667777777665   999999988775432        47


Q ss_pred             EEEEeccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         192 YLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++||||+++|+|.+++..+    +.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       115 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~  178 (496)
T PTZ00283        115 ALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS  178 (496)
T ss_pred             EEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC
Confidence            8999999999999999753    35899999999999999999999       99999999964

>KOG0590|consensus

Probab=99.67  E-value=1.5e-17  Score=143.51  Aligned_cols=232  Identities=19%  Similarity=0.231  Sum_probs=150.5

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLK--QYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      .+...|+||.|+++..+++|..|+.........  ..+..........+..++....+++.+++..+|..|.+.+++..+
T Consensus       207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence            345789999999999999999999755443211  111111121233356688899999999999999999999999999


Q ss_pred             CCCCC--CCCCCCCCCCCCCCCcccCCCCCCCCccc-cCCccccccCCCCcceeeccCCCCCCeeEEEEeec---ccccc
Q psy4166          83 PFLQP--LAPHPLIPEPHAGSPVTLSPEDSTDDFVV-IPNSADVVSTSPPRPSSLLLSPAPSQHVAIKRITK---KNLAK  156 (249)
Q Consensus        83 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~---~~~~~  156 (249)
                      +|+..  .......+   ...+.  ........+.. -.......+.|.++.++..........++.|....   .....
T Consensus       287 ~~~~~~~~~~~~~n~---~~~~~--~~~~~~~~~~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~  361 (601)
T KOG0590|consen  287 NWLSSKRNGFSKSNP---CADSL--TIAKSPIGFSEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESE  361 (601)
T ss_pred             ccccccccccccccc---ccccc--ccccCccccccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccH
Confidence            99987  11111100   00000  00000011110 01122345666666555554444444444443321   11111


Q ss_pred             h---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Q psy4166         157 T---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH  233 (249)
Q Consensus       157 ~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh  233 (249)
                      +   ..+..|..+-..+.   |+|++.....+.+....+-.||||++ +|+.++.+.+.++..++..+++|++.|++|+|
T Consensus       362 ~~~~~~i~sE~~i~~~l~---h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h  437 (601)
T KOG0590|consen  362 RKYNYNITSEFCIGSSLS---HPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLH  437 (601)
T ss_pred             HHHhhhhhhheeeccccc---CCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHH
Confidence            1   11334444545454   99999888877776666666999999 99999999878999999999999999999999


Q ss_pred             -------cCCccceeeeec
Q psy4166         234 -------DFTPWSFVILYT  245 (249)
Q Consensus       234 -------d~kp~nili~~~  245 (249)
                             |+||+|+|+...
T Consensus       438 ~~GiahrdlK~enll~~~~  456 (601)
T KOG0590|consen  438 SMGLAHRDLKLENLLVTEN  456 (601)
T ss_pred             hcCceeccCccccEEEecC
Confidence                   999999998764

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.67  E-value=8.4e-16  Score=122.07  Aligned_cols=120  Identities=21%  Similarity=0.230  Sum_probs=97.3

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+...     .++..||+|.+..... .....+.+|+.+++.+.   |+||+++++++......++||
T Consensus        12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~---~~~iv~~~~~~~~~~~~~lv~   88 (277)
T cd05062          12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN---CHHVVRLLGVVSQGQPTLVIM   88 (277)
T ss_pred             eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEcCCCCeEEEE
Confidence            45677888899876532     3467899998864322 12345778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++.+.+          .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~  154 (277)
T cd05062          89 ELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE  154 (277)
T ss_pred             ecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence            9999999999997632          2567788999999999999999       99999999974

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.67  E-value=8.7e-16  Score=123.64  Aligned_cols=121  Identities=16%  Similarity=0.283  Sum_probs=98.8

Q ss_pred             ccccCCCCcceeeccC-------CCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-------PAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-------~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..++.|.++.+|.+..       ...+..+|+|.+..... ...+.+.+|+.+++.+.  +||||+++++.+......|+
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~i~~~~~~~~~~~~~~l   98 (304)
T cd05101          21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYV   98 (304)
T ss_pred             ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc--cCCCchheeEEEecCCceEE
Confidence            4578888999997752       23455799998865422 22356778888888773  49999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|||+++|+|.+++.+.+                .++..++..++.|++.|+.|||       |+||+||++..
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~  172 (304)
T cd05101          99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE  172 (304)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence            999999999999998642                3677889999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.67  E-value=7.8e-16  Score=120.82  Aligned_cols=119  Identities=18%  Similarity=0.178  Sum_probs=100.0

Q ss_pred             cccCCCCcceeeccCCC-CC--CeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPA-PS--QHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++.|.++.+|.+.... .+  ..||+|.+..... ...+.+.+|+..++.+.   |+||+++++.+.. ...+++|||+
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD---HENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC---CCCccceeEEEcC-CeEEEEEEec
Confidence            35678888999887644 23  3689999987655 33456788888888776   9999999999988 8999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++.+..  .+++..+..++.|++.|+.|||       |++|+||++...
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~  133 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASD  133 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecC
Confidence            9999999998764  5889999999999999999999       999999999643

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.67  E-value=9.6e-16  Score=122.94  Aligned_cols=120  Identities=19%  Similarity=0.266  Sum_probs=98.2

Q ss_pred             ccccCCCCcceeeccC----------------CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEe
Q psy4166         122 DVVSTSPPRPSSLLLS----------------PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHC  184 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~----------------~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~  184 (249)
                      ..++.|.++.+|.+..                ..+...+|+|.+...... ....+.+|+.+++.++   |+||++++++
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~   87 (296)
T cd05095          11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK---DPNIIRLLAV   87 (296)
T ss_pred             eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCcceEEEE
Confidence            3567888889987632                234557899998754322 2356788999888876   9999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         185 KESDQHVYLVMEFCNGGDLADYLVSKG-----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       185 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +.+...+|++|||+++|+|.+++...+           .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~  165 (296)
T cd05095          88 CITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK  165 (296)
T ss_pred             EecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcC
Confidence            999999999999999999999998753           3667789999999999999999       99999999953

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.67  E-value=1.3e-15  Score=120.47  Aligned_cols=120  Identities=23%  Similarity=0.294  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~lv~  195 (249)
                      ..++.|.++.+|.+....+++.+|+|.+..... ....+.+|+.+++.+.  +|+||+++++++...      ..+|++|
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~--~h~~i~~~~~~~~~~~~~~~~~~~~iv~   88 (272)
T cd06637          12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYS--HHRNIATYYGAFIKKNPPGMDDQLWLVM   88 (272)
T ss_pred             HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhc--CCCCeeeEeeEEeecCCCCCCcEEEEEE
Confidence            356778899999998888999999999875432 2245778888888763  499999999998753      4689999


Q ss_pred             eccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+.+|+|.+++...  ..+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        89 e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~  146 (272)
T cd06637          89 EFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE  146 (272)
T ss_pred             EcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC
Confidence            999999999999874  35899999999999999999999       89999999964

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=6.3e-16  Score=128.79  Aligned_cols=114  Identities=20%  Similarity=0.286  Sum_probs=98.6

Q ss_pred             ccccCCCCcceeeccC--CCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLS--PAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.+|.||.+..  ...+..||+|.+...     ....+|+.+++.++   ||||+++++.+.....+|++||++.
T Consensus        98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~  169 (392)
T PHA03207         98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTIS---HRAIINLIHAYRWKSTVCMVMPKYK  169 (392)
T ss_pred             EeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcC---CCCccceeeeEeeCCEEEEEehhcC
Confidence            4578899999998764  345678999988643     33567999998877   9999999999999999999999995


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|.+++...+.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       170 -~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~  220 (392)
T PHA03207        170 -CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE  220 (392)
T ss_pred             -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC
Confidence             699999977778999999999999999999999       99999999865

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.67  E-value=1.1e-15  Score=119.52  Aligned_cols=118  Identities=22%  Similarity=0.267  Sum_probs=99.4

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      .++.|.++.+|.+.. ..+..+|+|.+....... ...+.+|+.+++.+.   ||||+++++++......++||||+++|
T Consensus         2 ~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           2 LLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD---HPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             ccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCC---CCCcCeEEEEEecCCccEEEEECCCCC
Confidence            457788899998875 468899999886543222 245778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... ..+++..+..++.+++.++.|+|       |+||+||++..
T Consensus        78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~  128 (250)
T cd05085          78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE  128 (250)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC
Confidence            999999764 35789999999999999999999       99999999954

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.67  E-value=9.2e-16  Score=122.10  Aligned_cols=121  Identities=21%  Similarity=0.319  Sum_probs=101.9

Q ss_pred             ccccCCCCcceeeccCC----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv  194 (249)
                      ..++.|.++.+|.+...    .++..+|+|.+...... ..+.+.+|+..++.++   |+||+++++++..  ....|++
T Consensus        10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~---~~~i~~~~~~~~~~~~~~~~lv   86 (284)
T cd05038          10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD---HENIVKYKGVCEKPGGRSLRLI   86 (284)
T ss_pred             eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC---CCChheEEeeeecCCCCceEEE
Confidence            45677888999988743    45889999999765443 2356888888888776   9999999999887  6689999


Q ss_pred             EeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+++++|.+++.... .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~  145 (284)
T cd05038          87 MEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE  145 (284)
T ss_pred             EecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC
Confidence            99999999999998754 5899999999999999999999       999999999653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.67  E-value=7.5e-16  Score=123.50  Aligned_cols=120  Identities=19%  Similarity=0.263  Sum_probs=98.5

Q ss_pred             ccccCCCCcceeeccCCCC--------------CCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAP--------------SQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKE  186 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~--------------~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~  186 (249)
                      ..++.|.++.+|++.....              ...||+|.++...... ...+.+|+++++.++   |+||+++++++.
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~---h~~i~~~~~~~~   87 (295)
T cd05097          11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK---NPNIIRLLGVCV   87 (295)
T ss_pred             hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC---CCCcCeEEEEEc
Confidence            4578888999998775432              2358999987542221 245778999888877   999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         187 SDQHVYLVMEFCNGGDLADYLVSKG------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       187 ~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .....|+||||+++++|.+++....            .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~  164 (295)
T cd05097          88 SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN  164 (295)
T ss_pred             CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence            9999999999999999999997542            2677888999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.67  E-value=5.7e-16  Score=121.03  Aligned_cols=118  Identities=25%  Similarity=0.382  Sum_probs=103.8

Q ss_pred             cCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         125 STSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       125 ~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      |.|.++.+|.+....+++.+|+|.+.+....+   ...+..|+.+++.+.   |+||+++++.+.....+|++|||++++
T Consensus         2 g~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           2 GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN---HPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC---CCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            56788899999888889999999998764432   235677888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.+.+++..+..++.|++.|+.|+|       |++|.||++...
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~  129 (250)
T cd05123          79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD  129 (250)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC
Confidence            99999998878999999999999999999999       999999998764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=1.3e-15  Score=120.10  Aligned_cols=120  Identities=19%  Similarity=0.323  Sum_probs=101.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc-----cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-----AKTQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv  194 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+.....     .....+.+|+.+++.++   |+||+++++++.+.  ..++++
T Consensus         8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~---h~~i~~~~~~~~~~~~~~~~~v   84 (264)
T cd06653           8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR---HDRIVQYYGCLRDPEEKKLSIF   84 (264)
T ss_pred             eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC---CCCcceEEEEEEcCCCCEEEEE
Confidence            456788899999999888999999998854211     11245677888888776   99999999998764  568999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        85 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~  141 (264)
T cd06653          85 VEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS  141 (264)
T ss_pred             EEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence            999999999999988777999999999999999999999       99999999854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.66  E-value=1.1e-15  Score=124.78  Aligned_cols=119  Identities=20%  Similarity=0.251  Sum_probs=102.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch--------------hcHHHHHHHHHHhhhcCCCCeeeeeEeEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT--------------QNFGKEINILKELTELHHENVVELLHCKES  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------~~~~~e~~~~~~~~~~~h~niv~l~~~~~~  187 (249)
                      ..++.|.++.+|.+.+...++.||+|.+........              ..+.+|+.+++.+.   |+||+++++++..
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~   91 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK---HENIMGLVDVYVE   91 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC---CcceeeeeEEEec
Confidence            357888999999999888999999999875432210              13567888888776   9999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         188 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       188 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ....|++|||++ |+|.+++.....+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        92 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~  154 (335)
T PTZ00024         92 GDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINS  154 (335)
T ss_pred             CCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECC
Confidence            999999999996 699999988878999999999999999999999       99999999864

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.66  E-value=3.2e-16  Score=125.08  Aligned_cols=84  Identities=30%  Similarity=0.297  Sum_probs=63.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CCC----------CCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VPK----------VPV   52 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~----------~~~   52 (249)
                      +..|+.++||||+||++|||++|++||.+.+.......+......                   .+.          ...
T Consensus       175 ~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (287)
T cd07848         175 GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLG  254 (287)
T ss_pred             CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhc
Confidence            457889999999999999999999999887654332221111000                   000          011


Q ss_pred             CCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          53 GTSAELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        53 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      .++.++.+||++||++||.+|++++++++||||
T Consensus       255 ~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         255 ILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            367889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.66  E-value=7.1e-16  Score=124.88  Aligned_cols=119  Identities=15%  Similarity=0.152  Sum_probs=97.5

Q ss_pred             ccccCCCCcceeeccCCCCCC----eeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ----HVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.++.||++....++.    .||+|.+..... ...+.+.+|+.+++.+.   ||||+++++++... ..++++|
T Consensus        13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~g~~~~~-~~~~v~e   88 (316)
T cd05108          13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD---NPHVCRLLGICLTS-TVQLITQ   88 (316)
T ss_pred             eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEcCC-Cceeeee
Confidence            567889999999887544444    489999864322 22356778888888776   99999999998764 5789999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++.+. ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~  144 (316)
T cd05108          89 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT  144 (316)
T ss_pred             cCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC
Confidence            99999999999875 35889999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.66  E-value=1.6e-15  Score=119.04  Aligned_cols=120  Identities=26%  Similarity=0.414  Sum_probs=100.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+.+..+++.+|+|.+.......  .+.+.+|+.+++.++   |+|++++++.+.. ...+|++|||+
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~lv~e~~   82 (257)
T cd08223           6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK---HPNIVAYRESWEGEDGLLYIVMGFC   82 (257)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC---CCCeeeeeeeecCCCCEEEEEeccc
Confidence            35677888999999988889999999997543322  245677777777776   9999999998764 45689999999


Q ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++++|.+++...  ..+++.++..++.+++.|+.|||       |+||+||++..
T Consensus        83 ~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~  137 (257)
T cd08223          83 EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR  137 (257)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec
Confidence            999999999863  35899999999999999999999       89999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00284 protein kinase; Provisional

Probab=99.66  E-value=1.5e-16  Score=135.44  Aligned_cols=88  Identities=25%  Similarity=0.423  Sum_probs=64.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC------------------------CC-C-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP------------------------KV-P-----   51 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------------~~-~-----   51 (249)
                      +..|+.++|||||||++|||++|++||.+.+..+....+.......+                        .. +     
T Consensus       319 ~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (467)
T PTZ00284        319 GLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLAR  398 (467)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHh
Confidence            56799999999999999999999999988776543332222111000                        00 0     


Q ss_pred             ---------CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          52 ---------VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        52 ---------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                               ...++.+.+||.+||++||.+|+++++++.||||....
T Consensus       399 ~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        399 IARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             hhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence                     00135678999999999999999999999999998643

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.66  E-value=1.4e-15  Score=121.83  Aligned_cols=119  Identities=17%  Similarity=0.234  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....+++.+|+|.+......+  ...+.+|+.+++.+.   ||||+++++++...  ..+|+||||
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~~~lv~e~   87 (293)
T cd07843          11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ---HPNIVTVKEVVVGSNLDKIYMVMEY   87 (293)
T ss_pred             hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC---CCCEEEEEEEEEecCCCcEEEEehh
Confidence            45678889999999988889999999997554322  124567888888776   99999999998877  899999999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++ ++|.+++.... .+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        88 ~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~  141 (293)
T cd07843          88 VE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN  141 (293)
T ss_pred             cC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC
Confidence            97 59999998754 4899999999999999999999       99999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.66  E-value=9.1e-16  Score=126.44  Aligned_cols=117  Identities=21%  Similarity=0.319  Sum_probs=97.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.+|.+.+..++..||+|.+.....  .....+.+|+.+++.+.   ||||+++++++...      ..+|+
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~~l  103 (359)
T cd07876          27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN---HKNIISLLNVFTPQKSLEEFQDVYL  103 (359)
T ss_pred             EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC---CCCEeeeeeeeccCCCccccceeEE
Confidence            568899999999999989999999999875422  12245677888887776   99999999998654      35899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+++ +|.+.+..  .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       104 v~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~  158 (359)
T cd07876         104 VMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS  158 (359)
T ss_pred             EEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC
Confidence            9999964 77777753  4899999999999999999999       99999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.66  E-value=1.3e-15  Score=121.87  Aligned_cols=119  Identities=26%  Similarity=0.358  Sum_probs=100.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..||+|.+....... ...+.+|+.+++.+.   |+||+++++++.+....|+||||+. 
T Consensus        11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~lv~e~~~-   86 (291)
T cd07870          11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK---HANIVLLHDIIHTKETLTFVFEYMH-   86 (291)
T ss_pred             EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC---CCCEeEEEEEEecCCeEEEEEeccc-
Confidence            45788889999999988899999999987543322 234667888888776   9999999999999999999999995 


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|.+++... +.+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~  138 (291)
T cd07870          87 TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY  138 (291)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC
Confidence            6888777653 45788999999999999999999       99999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG4645|consensus

Probab=99.66  E-value=3.4e-17  Score=145.64  Aligned_cols=120  Identities=22%  Similarity=0.370  Sum_probs=105.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|+|.+|.||.+.+..+|...|+|.+.......  -..+.+|..++..+.   |||+|++|++-.+.+.+||.||||+
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln---HpNlV~YyGVEvHRekv~IFMEyC~ 1317 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN---HPNLVRYYGVEVHREKVYIFMEYCE 1317 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc---CccccccCceeecHHHHHHHHHHhc
Confidence            35788999999999999999999999887543332  134567777777766   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++...+..+|...+.|..|++.|+.|||       |+||.||++.-
T Consensus      1318 ~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~ 1369 (1509)
T KOG4645|consen 1318 GGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF 1369 (1509)
T ss_pred             cCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec
Confidence            9999999999888889999999999999999999       99999999854

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.66  E-value=1.5e-15  Score=121.30  Aligned_cols=120  Identities=19%  Similarity=0.183  Sum_probs=96.1

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|++...     ..+..||+|.+...... ....+.+|+.+++.+.   |+||+++++++.+....|+||
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~lv~   88 (288)
T cd05061          12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT---CHHVVRLLGVVSKGQPTLVVM   88 (288)
T ss_pred             eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEcCCCCcEEEE
Confidence            46788999999987432     34568999988644221 1234667777777766   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++.+.+          .++...+..++.|++.|+.|||       |+||+||++..
T Consensus        89 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~  154 (288)
T cd05061          89 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH  154 (288)
T ss_pred             eCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence            9999999999997632          2456778899999999999999       89999999974

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.66  E-value=1.7e-15  Score=118.78  Aligned_cols=119  Identities=22%  Similarity=0.278  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..+|+|.+...... ...+.+|+++++.++   ||||+++++++......|++|||+++|
T Consensus        10 ~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd05112          10 QEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS-EEDFIEEAQVMMKLS---HPKLVQLYGVCTERSPICLVFEFMEHG   84 (256)
T ss_pred             eeecCcccceEEEEEEe-CCCeEEEEECCCCCCC-HHHHHHHHHHHHhCC---CCCeeeEEEEEccCCceEEEEEcCCCC
Confidence            45677888999988654 4678999988754332 246778998888876   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~  136 (256)
T cd05112          85 CLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGEN  136 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCC
Confidence            999999864 46899999999999999999999       999999999753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.66  E-value=1.9e-15  Score=122.33  Aligned_cols=122  Identities=16%  Similarity=0.256  Sum_probs=98.8

Q ss_pred             ccccCCCCcceeeccC-------CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-------PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-------~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..++.|.++.+|.+..       ......+|+|.+...... ....+..|+.+++.+.  +||||+++++++.+...+|+
T Consensus        18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~l   95 (314)
T cd05099          18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG--KHKNIINLLGVCTQEGPLYV   95 (314)
T ss_pred             eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc--CCCCeeeEEEEEccCCceEE
Confidence            5678888999998753       234567899988754222 1245677888887763  49999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|||+++|+|.+++...                ..+++.++..++.|++.|+.|||       |+||+|||+..+
T Consensus        96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~  170 (314)
T cd05099          96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED  170 (314)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence            99999999999999763                23788899999999999999999       999999999643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.66  E-value=1.7e-15  Score=119.19  Aligned_cols=119  Identities=18%  Similarity=0.264  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..+|+|.+..... ....+.+|+.+++.++   |+||+++++++.+....|++|||++++
T Consensus        12 ~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~~~   86 (261)
T cd05034          12 RKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLR---HDKLVQLYAVCSEEEPIYIVTEYMSKG   86 (261)
T ss_pred             eeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCC---CCCEeeeeeeeecCCceEEEEeccCCC
Confidence            45678888999988754 557799999875433 2356788888888776   999999999999989999999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+..  .+++..+..++.+++.|+.|||       |+||+||++...
T Consensus        87 ~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~  139 (261)
T cd05034          87 SLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGEN  139 (261)
T ss_pred             CHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCC
Confidence            9999998753  5899999999999999999999       999999999653

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.66  E-value=1.5e-15  Score=122.49  Aligned_cols=121  Identities=17%  Similarity=0.256  Sum_probs=98.8

Q ss_pred             ccccCCCCcceeeccCC-------CCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-------APSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.++.+|.+...       .....+|+|.+..... .....+.+|+.+++.+.  +|+||+++++++......|+
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~--~h~~i~~~~~~~~~~~~~~l  101 (307)
T cd05098          24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYV  101 (307)
T ss_pred             eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc--CCCCEeeEEEEEecCCceEE
Confidence            46788899999987642       2345799999875422 22245677888888773  49999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+++|+|.+++.+++                .+++.++..++.|++.|+.|||       |+||+||++..
T Consensus       102 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  175 (307)
T cd05098         102 IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  175 (307)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence            999999999999998642                3788899999999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.66  E-value=5.6e-16  Score=123.03  Aligned_cols=121  Identities=21%  Similarity=0.398  Sum_probs=104.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....++..||+|.+.++....   .+.+.+|..+++.+.  +|+||+++++++.+....|++|||+
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~--~~~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd05581           7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN--GHPGIIKLYYTFQDEENLYFVLEYA   84 (280)
T ss_pred             eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc--cCCCchhHHHHhcCCceEEEEEcCC
Confidence            45788899999999988899999999987643221   234566777766554  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++++|.+++.+.+.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        85 ~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~  137 (280)
T cd05581          85 PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK  137 (280)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC
Confidence            99999999998888999999999999999999999       99999999965

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.65  E-value=2e-15  Score=118.37  Aligned_cols=118  Identities=23%  Similarity=0.299  Sum_probs=103.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..+|+|.+.....  .+.+.+|+.+++.++   |+||+++++++.+....|++|||++++
T Consensus         9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~---~~~i~~~~~~~~~~~~~~l~~e~~~~~   83 (256)
T cd06612           9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCD---SPYIVKYYGSYFKNTDLWIVMEYCGAG   83 (256)
T ss_pred             hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCC---CCcEeeeeeeeecCCcEEEEEecCCCC
Confidence            456778889999998888899999999875532  466788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... ..+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        84 ~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~  134 (256)
T cd06612          84 SVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE  134 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC
Confidence            999999764 46899999999999999999999       89999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG4279|consensus

Probab=99.65  E-value=1.3e-16  Score=134.37  Aligned_cols=86  Identities=30%  Similarity=0.488  Sum_probs=78.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ++|+.++|||||||++.||.||++||......+............|++|..++.+++.||.+|+..||.+||++.+++..
T Consensus       753 RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  753 RGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             cCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence            68999999999999999999999999877666666556677778889999999999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          83 PFLQPL   88 (249)
Q Consensus        83 ~~~~~~   88 (249)
                      ||++..
T Consensus       833 pFlq~~  838 (1226)
T KOG4279|consen  833 PFLQHN  838 (1226)
T ss_pred             cccccC
Confidence            999854

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=2e-15  Score=120.57  Aligned_cols=120  Identities=17%  Similarity=0.223  Sum_probs=100.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.+|+|.+...... ....+.+|+++++.+.   ||||+++++++.+  ...+|+||||+
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv~e~~   83 (287)
T cd06621           7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK---SPYIVKYYGAFLDESSSSIGIAMEYC   83 (287)
T ss_pred             EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC---CCCeeeeeeEEEccCCCeEEEEEEec
Confidence            4568888999999999889999999998754332 2355778888888776   9999999998865  44799999999


Q ss_pred             CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|++|.+++..    ...+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~  140 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR  140 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec
Confidence            99999988764    245889999999999999999999       99999999864

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.65  E-value=3.8e-16  Score=127.18  Aligned_cols=89  Identities=19%  Similarity=0.391  Sum_probs=73.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+...   ....|..++..+++||.+||+.||.+|++     +
T Consensus       189 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  265 (329)
T PTZ00263        189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG---RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGV  265 (329)
T ss_pred             CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC---CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCH
Confidence            456889999999999999999999999988776655444332   23446668999999999999999999996     7


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      ++++.||||....+...
T Consensus       266 ~~ll~hp~f~~~~~~~~  282 (329)
T PTZ00263        266 ADVKNHPYFHGANWDKL  282 (329)
T ss_pred             HHHhcCCccCCCCHHHH
Confidence            99999999998766543

>KOG0696|consensus

Probab=99.65  E-value=2.6e-16  Score=125.46  Aligned_cols=91  Identities=22%  Similarity=0.369  Sum_probs=79.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      -++|+.++||||+||+||||+.|++||.|.+..++.+.+....   ..+|+.+|.++.++++.+|.+.|.+|..     -
T Consensus       524 YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn---vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge  600 (683)
T KOG0696|consen  524 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN---VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGE  600 (683)
T ss_pred             ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc---CcCcccccHHHHHHHHHHhhcCCccccCCCCccc
Confidence            3689999999999999999999999999999998876654433   2457889999999999999999999996     4


Q ss_pred             HHHhcCCCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPLIP   95 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~~~   95 (249)
                      .+|..||||+.+.|..+..
T Consensus       601 ~di~~H~FFR~iDWek~E~  619 (683)
T KOG0696|consen  601 RDIREHPFFRRIDWEKLER  619 (683)
T ss_pred             cchhhCcchhhccHHHHhh
Confidence            6899999999999987654

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.65  E-value=2.6e-16  Score=132.84  Aligned_cols=88  Identities=24%  Similarity=0.375  Sum_probs=67.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-----------------CC---------CCCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-----------------VP---------KVPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-----------------~~---------~~~~~~~~   56 (249)
                      ..|+.++||||+||++|||++|.+||.+.+..+....+......                 .+         .+|...+.
T Consensus       246 ~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~  325 (440)
T PTZ00036        246 TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPD  325 (440)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCH
Confidence            46899999999999999999999999987664432222111000                 00         12334678


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++.+||.+||.+||.+|+++.+++.||||.....
T Consensus       326 ~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        326 DAINFISQFLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence            9999999999999999999999999999986543

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.4e-15  Score=120.67  Aligned_cols=121  Identities=21%  Similarity=0.242  Sum_probs=99.2

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+...     .++..||+|.+..... .....+.+|+.+++.+.   |+||+++++++......|+||
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~~v~   88 (277)
T cd05032          12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN---CHHVVRLLGVVSTGQPTLVVM   88 (277)
T ss_pred             eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC---CCceeEEEEEEcCCCCcEEEE
Confidence            56788889999877654     3457899999865432 22345678888887776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKG----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++....          .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~  155 (277)
T cd05032          89 ELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED  155 (277)
T ss_pred             ecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC
Confidence            9999999999997532          3677889999999999999999       899999999643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.65  E-value=1.7e-15  Score=119.43  Aligned_cols=117  Identities=19%  Similarity=0.240  Sum_probs=96.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....+ ..||+|.+..... ....+.+|+.+++.++   |+||+++++.+. ....|+||||+++|
T Consensus        12 ~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~---~~~i~~~~~~~~-~~~~~lv~e~~~~~   85 (262)
T cd05071          12 VKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLR---HEKLVQLYAVVS-EEPIYIVTEYMSKG   85 (262)
T ss_pred             eecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCC---CCCcceEEEEEC-CCCcEEEEEcCCCC
Confidence            3567788899998876544 4699999975433 2256788888888876   999999999875 45689999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.  ..+++..+..++.|++.|+.|+|       |+||+||++..
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~  137 (262)
T cd05071          86 SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE  137 (262)
T ss_pred             cHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC
Confidence            999999863  35889999999999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.65  E-value=1.6e-15  Score=121.44  Aligned_cols=122  Identities=16%  Similarity=0.286  Sum_probs=99.5

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.++.+|.+...     .....+|+|.+...... ....+.+|+.+++.+.  +|+||+++++++...+.+|++|
T Consensus        18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~i~~~~~~~~~~~~~~li~   95 (293)
T cd05053          18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGVCTQEGPLYVVV   95 (293)
T ss_pred             eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc--CCCCeeeEEEEEcCCCCeEEEE
Confidence            45688888999987654     33478999998754222 1244678888888772  4999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++.+.                +.+++..+..++.|++.|+.|||       |+||.||++..+
T Consensus        96 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~  168 (293)
T cd05053          96 EYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED  168 (293)
T ss_pred             EeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence            999999999999653                35888999999999999999999       999999999653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.65  E-value=7e-16  Score=122.91  Aligned_cols=120  Identities=25%  Similarity=0.395  Sum_probs=102.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..+|+|.+.......  ...+.+|+.+++.++   |+||+++++++.+...+|+++||++
T Consensus         6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~   82 (284)
T cd07839           6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK---HKNIVRLYDVLHSDKKLTLVFEYCD   82 (284)
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC---CCCeeeHHHHhccCCceEEEEecCC
Confidence            35677888999999998899999999997543221  245677888888876   9999999999999999999999996


Q ss_pred             CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       ++|.+++.+ .+.+++..++.++.|++.|+.|||       |+||+||++...
T Consensus        83 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~  135 (284)
T cd07839          83 -QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN  135 (284)
T ss_pred             -CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence             588888875 456999999999999999999999       999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.65  E-value=1.3e-15  Score=119.99  Aligned_cols=121  Identities=17%  Similarity=0.241  Sum_probs=105.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....+++.+|+|.+...... ..+.+.+|+..++.+.   ||||+++++.+.....+|++|||+++
T Consensus         7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (265)
T cd06605           7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN---SPYIVGFYGAFYNNGDISICMEYMDG   83 (265)
T ss_pred             HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC---CCchhhhheeeecCCEEEEEEEecCC
Confidence            3567788899999999889999999998765332 2355778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      ++|.+++... +.+++..+..++.|++.|+.|||        |++|+||++...
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~  137 (265)
T cd06605          84 GSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR  137 (265)
T ss_pred             CcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCC
Confidence            9999999876 67999999999999999999999        689999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0201|consensus

Probab=99.65  E-value=4.6e-17  Score=130.09  Aligned_cols=85  Identities=26%  Similarity=0.386  Sum_probs=71.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++||||||++.+||++|.+|+....+..+...+-+.  .+|.....+++.+++||..||.+||+.||++.++++
T Consensus       185 ~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~--~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  185 QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS--APPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC--CCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            568999999999999999999999999988875544333332  233444578999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      |.|+...
T Consensus       263 h~FIk~a  269 (467)
T KOG0201|consen  263 HKFIKRA  269 (467)
T ss_pred             hHHHHhc
Confidence            9999863

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.65  E-value=2.7e-15  Score=117.02  Aligned_cols=121  Identities=27%  Similarity=0.347  Sum_probs=106.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+....++..+++|++........+.+.+|+..++.+.   |+|++++++.+......++++||++|+
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l~~e~~~~~   82 (253)
T cd05122           6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK---HPNIVKYYGSYLKKDELWIVMEFCSGG   82 (253)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCCeEEEEEecCCCC
Confidence            35677888999999988889999999997755434466788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |++|+||++..+
T Consensus        83 ~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~  134 (253)
T cd05122          83 SLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD  134 (253)
T ss_pred             cHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC
Confidence            999999886 57999999999999999999999       999999999754

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.65  E-value=6.1e-16  Score=126.67  Aligned_cols=118  Identities=23%  Similarity=0.354  Sum_probs=98.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..++..||+|.+......  ..+.+.+|+.+++.++   |+||+++++++...      ...|+
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~~   97 (343)
T cd07878          21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK---HENVIGLLDVFTPATSIENFNEVYL   97 (343)
T ss_pred             eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC---CCchhhhhhhhcccccccccCcEEE
Confidence            4678899999999998889999999998754222  2245667888888776   99999999987543      45899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||++ +++|.+++.. +.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        98 ~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~  153 (343)
T cd07878          98 VTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE  153 (343)
T ss_pred             EeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC
Confidence            99998 7899988864 45999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.65  E-value=1.2e-15  Score=119.65  Aligned_cols=120  Identities=22%  Similarity=0.364  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..+|+|.+......  ..+.+.+|+.+++.++   |+||+++++.+.+....|+|+||++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~---h~~i~~~~~~~~~~~~~~lv~e~~~   82 (257)
T cd08225           6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK---HPNIVTFFASFQENGRLFIVMEYCD   82 (257)
T ss_pred             EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC---CCChhhhhheeccCCeEEEEEecCC
Confidence            3567788899999999889999999998764322  2345678888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+..  .+++..+..++.|++.|+.|||       |+||.||++..
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~  136 (257)
T cd08225          83 GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK  136 (257)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC
Confidence            999999998653  4789999999999999999999       89999999964

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG1026|consensus

Probab=99.65  E-value=4.6e-16  Score=133.53  Aligned_cols=120  Identities=23%  Similarity=0.296  Sum_probs=103.0

Q ss_pred             cccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         123 VVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      .+|.|.||.||.+.-.     .....||||.++..... .+++|+||+..+..++   |||||+|+|.|...+.+|+|.|
T Consensus       493 eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~---H~nIVrLlGVC~~~~P~~MvFE  569 (774)
T KOG1026|consen  493 ELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ---HPNIVRLLGVCREGDPLCMVFE  569 (774)
T ss_pred             hhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc---CCCeEEEEEEEccCCeeEEEEE
Confidence            4788999999877643     34578999999876555 4578999999999988   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKG--------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~--------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||..|||.+||+.++              .++..+...++.||+.||.||-       |+-.-|.|+.-+
T Consensus       570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN  639 (774)
T ss_pred             ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence            999999999998653              1778899999999999999986       888888887643

>KOG0584|consensus

Probab=99.65  E-value=2.4e-16  Score=131.11  Aligned_cols=121  Identities=14%  Similarity=0.264  Sum_probs=105.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe--EEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA----KTQNFGKEINILKELTELHHENVVELLHCKESDQH--VYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~--~~lv~  195 (249)
                      .++|.|++..||.+.+..+|..||--.++.....    ..+.+..|+.+|+.|+   |+|||++|.+|.+...  .-+|+
T Consensus        46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~---H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK---HPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC---CCceeeeeeheecCCCceeeeee
Confidence            4678999999999999999999997655543222    2367899999999988   9999999999987555  88999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~  245 (249)
                      |++.+|+|..|.++.+.++-.-++.|++||+.||.|||         |+|=.||.|.-+
T Consensus       123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~  181 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN  181 (632)
T ss_pred             ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC
Confidence            99999999999999999999999999999999999999         888899987543

>KOG0695|consensus

Probab=99.65  E-value=1.5e-16  Score=123.70  Aligned_cols=122  Identities=18%  Similarity=0.282  Sum_probs=109.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++|.|++..|.++...++.+.||+|++++.-..+   -...+.|..+....+  +||.+|-|+.||++...+++|.||.
T Consensus       256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as--n~pflvglhscfqtesrlffvieyv  333 (593)
T KOG0695|consen  256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS--NNPFLVGLHSCFQTESRLFFVIEYV  333 (593)
T ss_pred             eeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc--CCCeEEehhhhhcccceEEEEEEEe
Confidence            46788999999999999999999999998764433   244678888888776  7999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.-.++++++++|+.++.|..+|+.|+.|||       |+|..|+||-.+
T Consensus       334 ~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae  387 (593)
T KOG0695|consen  334 NGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE  387 (593)
T ss_pred             cCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC
Confidence            99999999999999999999999999999999999       999999998654

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.65  E-value=2e-16  Score=126.19  Aligned_cols=93  Identities=17%  Similarity=0.285  Sum_probs=72.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQY-YEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----   75 (249)
                      +..|+.++||||+||++|||++|+.||.+.+....... ...........+..++.++.+|+.+||..||.+|++     
T Consensus       175 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~  254 (285)
T cd05631         175 NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNG  254 (285)
T ss_pred             CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCC
Confidence            56789999999999999999999999987654322211 112222233455678999999999999999999997     


Q ss_pred             HHHHhcCCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPLI   94 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~~   94 (249)
                      ++++++||||....+....
T Consensus       255 ~~~~~~h~~~~~~~~~~~~  273 (285)
T cd05631         255 AAGVKQHPIFKNINFKRLE  273 (285)
T ss_pred             HHHHhcCHhhcCCCHHHHH
Confidence            8999999999987766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.65  E-value=2.4e-15  Score=119.52  Aligned_cols=119  Identities=17%  Similarity=0.180  Sum_probs=99.0

Q ss_pred             ccccCCCCcceeeccCCCCCC----eeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ----HVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~----~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....++.    .+|+|.+...... ....+.+|+..++.++   |+||+++++++.. ...+++||
T Consensus        13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~-~~~~~v~e   88 (279)
T cd05057          13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD---HPHVVRLLGICLS-SQVQLITQ   88 (279)
T ss_pred             ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEec-CceEEEEe
Confidence            457888999999887655443    5899988755432 2245778888888776   9999999999887 78999999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++.+. +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        89 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~  144 (279)
T cd05057          89 LMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT  144 (279)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC
Confidence            99999999999875 46899999999999999999999       99999999953

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.65  E-value=8.8e-16  Score=141.55  Aligned_cols=113  Identities=24%  Similarity=0.268  Sum_probs=97.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.+|.||.+....++..||+|++.....    ....|+.+++.++   |||||++++++.+....|+||||+++|
T Consensus       696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~---HpnIv~~~~~~~~~~~~~lv~Ey~~~g  768 (968)
T PLN00113        696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQ---HPNIVKLIGLCRSEKGAYLIHEYIEGK  768 (968)
T ss_pred             cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCC---CCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence            467889999999999888999999999864322    1234567776665   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh----------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH----------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh----------d~kp~nili~~  244 (249)
                      +|.+++++   +++..+..++.|++.|+.|||          |+||+||++..
T Consensus       769 ~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~  818 (968)
T PLN00113        769 NLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG  818 (968)
T ss_pred             cHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC
Confidence            99999963   889999999999999999999          89999999853

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.65  E-value=1.2e-15  Score=121.69  Aligned_cols=120  Identities=24%  Similarity=0.315  Sum_probs=103.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+.......  .+.+.+|+++++.++   |+||+++++++.+....|++|||++
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~iv~e~~~   83 (288)
T cd07833           7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR---HENIVNLKEAFRRKGRLYLVFEYVE   83 (288)
T ss_pred             EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC---CCCeeehhheEEECCEEEEEEecCC
Confidence            45678889999999988889999999987543222  356788999988887   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++.+..+..+...+++.++..++.|++.|+.|||       |++|+||++..
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~  135 (288)
T cd07833          84 RTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE  135 (288)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC
Confidence            8777777766667999999999999999999999       99999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.65  E-value=2.3e-15  Score=118.39  Aligned_cols=120  Identities=25%  Similarity=0.384  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ...+.|.++.+|.+.+..++..+|+|.+..+....  .+.+..|+.+++.++   |+||+++++++..  ....|++|||
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~~~~~e~   82 (265)
T cd08217           6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK---HPNIVRYYDRIIDRSNQTLYIVMEY   82 (265)
T ss_pred             eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC---CCccceeeeeeecCCCCEEEEEehh
Confidence            45677889999999998899999999987543322  245677888888776   9999999998754  4578999999


Q ss_pred             cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh------------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH------------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh------------d~kp~nili~~  244 (249)
                      +++++|.+++.+.    +.+++..+..++.|++.|+.|||            |++|+||++..
T Consensus        83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~  145 (265)
T cd08217          83 CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA  145 (265)
T ss_pred             ccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec
Confidence            9999999999763    56899999999999999999999            89999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.65  E-value=1.3e-15  Score=121.59  Aligned_cols=121  Identities=17%  Similarity=0.274  Sum_probs=101.7

Q ss_pred             ccccCCCCcceeeccC---CCCCCeeEEEEeecccccc----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNLAK----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~~~----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..++.|.++.+|.+..   ..++..||+|.+.+.....    .+.+.+|+.++..+.  +|+||+++++++......|+|
T Consensus         6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~--~~~~i~~~~~~~~~~~~~~lv   83 (288)
T cd05583           6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR--RCPFLVTLHYAFQTDTKLHLI   83 (288)
T ss_pred             EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc--CCcchhhhheeeecCCEEEEE
Confidence            4567888889987663   3467889999997643221    244677888888774  599999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++|+|.+++.+++.+++..++.++.|++.|+.|||       |++|.||++..
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~  140 (288)
T cd05583          84 LDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS  140 (288)
T ss_pred             EecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC
Confidence            999999999999988778999999999999999999999       89999999964

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.65  E-value=1.7e-15  Score=121.54  Aligned_cols=121  Identities=21%  Similarity=0.317  Sum_probs=98.7

Q ss_pred             ccccCCCCcceeeccCCCCCC--eeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ--HVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.+|.+|.+....++.  .+++|.+.... ....+.+.+|+.++..+.  +||||+++++++.....+|++|||+
T Consensus         8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~~~~~~~~~~~~~lv~e~~   85 (297)
T cd05089           8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG--HHPNIINLLGACENRGYLYIAIEYA   85 (297)
T ss_pred             eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc--CCCchhheEEEEccCCcceEEEEec
Confidence            467889999999987765554  46888776322 112345778888887773  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++.+.+                .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~  154 (297)
T cd05089          86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE  154 (297)
T ss_pred             CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC
Confidence            9999999997642                3788999999999999999999       99999999954

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.65  E-value=1e-15  Score=121.02  Aligned_cols=120  Identities=20%  Similarity=0.259  Sum_probs=98.0

Q ss_pred             cccCCCCcceeeccCCCC------CCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAP------SQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      .+|.|.++.+|.+.....      +..+|+|.+..... .....+.+|+.+++.+.   ||||+++++++......|+||
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN---HPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC---CCCeeeEeeeecCCCCeEEEE
Confidence            357788889988765432      36799998865432 22355778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK-------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++.+.       ..+++.++..++.|++.|+.|||       |+||+||++..+
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~  142 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEK  142 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecC
Confidence            999999999999753       23788999999999999999999       999999998753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.65  E-value=2.4e-15  Score=122.67  Aligned_cols=121  Identities=16%  Similarity=0.255  Sum_probs=97.8

Q ss_pred             ccccCCCCcceeeccCCC-------CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-------PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-------~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..++.|.++.+|.+....       ....+|+|.+...... ..+.+.+|+.+++.+.  +|+||+++++++......|+
T Consensus        18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~l   95 (334)
T cd05100          18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYV   95 (334)
T ss_pred             ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc--CCCCeeeeeEEEccCCceEE
Confidence            467888999999886422       2346899987653222 2246778888888773  49999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|||+++|+|.+++.+.+                .++...+..++.|++.|+.|||       |+||+|||+..
T Consensus        96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~  169 (334)
T cd05100          96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE  169 (334)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence            999999999999998642                3677888899999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG2345|consensus

Probab=99.65  E-value=2.3e-16  Score=117.59  Aligned_cols=119  Identities=18%  Similarity=0.206  Sum_probs=105.1

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-----eCCeEEEEEec
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE-----SDQHVYLVMEF  197 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-----~~~~~~lv~e~  197 (249)
                      ..+.|+++.++++.+-.++..||+|++--...++.+...+|++..+.++   |||+++++++..     .....||+..|
T Consensus        28 ~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~---s~~vl~l~dh~l~~~~D~~~~~yll~Py  104 (302)
T KOG2345|consen   28 LLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN---SPNVLRLVDHQLREEKDGKHEAYLLLPY  104 (302)
T ss_pred             eecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC---CcchHHHHHHHHHhhccCceeEEEEeeh
Confidence            5678889999999999999999999998877666678899999999887   999999987653     34569999999


Q ss_pred             cCCCCHHHHHHhc---C-CCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK---G-TLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~---~-~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~  244 (249)
                      ...|+|.+.+...   | .++|.++..++.+++.|+.+||         |+||.|||++.
T Consensus       105 y~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~  164 (302)
T KOG2345|consen  105 YKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD  164 (302)
T ss_pred             hccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC
Confidence            9999999999864   2 5999999999999999999999         99999999986

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.65  E-value=2.7e-15  Score=118.05  Aligned_cols=118  Identities=18%  Similarity=0.272  Sum_probs=99.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|++.. ..++.||+|.+...... ...+.+|+.+++.++   |+||+++++.+. ...+|++|||+++|
T Consensus        12 ~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~---h~~i~~~~~~~~-~~~~~~v~e~~~~~   85 (260)
T cd05067          12 KKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQ---HPRLVRLYAVVT-QEPIYIITEYMENG   85 (260)
T ss_pred             eeeccCccceEEeeec-CCCceEEEEEecCCCCc-HHHHHHHHHHHHhcC---CcCeeeEEEEEc-cCCcEEEEEcCCCC
Confidence            4678899999999875 45788999998765432 356788888888776   999999998864 46799999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...  ..+++.++..++.|++.|+.|||       |+||+||++..+
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~  138 (260)
T cd05067          86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSET  138 (260)
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCC
Confidence            999999764  35889999999999999999999       999999999653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.65  E-value=2.5e-15  Score=118.93  Aligned_cols=121  Identities=17%  Similarity=0.207  Sum_probs=97.3

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe------
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQH------  190 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~------  190 (249)
                      ..+|.|.+|.+|.+....   .+..||+|.+.......  ...+.+|+..++.++   |+||+++++++.....      
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD---HPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC---CCCeeeEEeeeccCCccccCcc
Confidence            456888999999876543   45789999987543222  245778888887776   9999999998766544      


Q ss_pred             EEEEEeccCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         191 VYLVMEFCNGGDLADYLVSK------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       191 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .+++|||+++|+|.+++...      ..+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~  149 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED  149 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence            89999999999999998543      25889999999999999999999       899999999654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.65  E-value=1.6e-15  Score=128.10  Aligned_cols=113  Identities=19%  Similarity=0.166  Sum_probs=98.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.||++.+...++.||+|....      ..+.+|+++++.++   |+|||++++++...+..|+|||++. +
T Consensus       175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~---HpnIv~l~~~~~~~~~~~lv~e~~~-~  244 (461)
T PHA03211        175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLS---HPAVLALLDVRVVGGLTCLVLPKYR-S  244 (461)
T ss_pred             EEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCC---CCCCCcEEEEEEECCEEEEEEEccC-C
Confidence            356788999999999999999999996432      34568999998887   9999999999999999999999995 7


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... +.+++.++..++.|++.||.|||       |+||+||||..
T Consensus       245 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~  295 (461)
T PHA03211        245 DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG  295 (461)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC
Confidence            999988764 46999999999999999999999       99999999964

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.64  E-value=3.2e-15  Score=117.10  Aligned_cols=120  Identities=21%  Similarity=0.345  Sum_probs=105.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e~  197 (249)
                      ..++.|+++.+|.+....++..+++|.+.....  ...+.+.+|+..++.++   |+||+++++.+...  ..++++|||
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~~lv~e~   82 (260)
T cd06606           6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ---HPNIVRYYGSERDEEKNTLNIFLEY   82 (260)
T ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC---CCCEeeEEEEEecCCCCeEEEEEEe
Confidence            346778889999999888999999999876543  22356778888888776   99999999999988  899999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++++|.+++.+...+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~  136 (260)
T cd06606          83 VSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS  136 (260)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC
Confidence            999999999998878999999999999999999999       99999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.64  E-value=6.7e-16  Score=123.39  Aligned_cols=83  Identities=23%  Similarity=0.344  Sum_probs=63.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-------------------CC--------CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-------------------PK--------VPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~--------~~~~~~   55 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......+                   +.        ....++
T Consensus       179 ~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (288)
T cd07871         179 TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLD  258 (288)
T ss_pred             cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCC
Confidence            468899999999999999999999998877654433221111100                   00        012467


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      .++.+||.+||++||.+|+|++++++||||
T Consensus       259 ~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         259 TDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.64  E-value=2.6e-16  Score=127.78  Aligned_cols=89  Identities=22%  Similarity=0.462  Sum_probs=74.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++||||+||++|||++|+.||.+.+.......+...   ....|..+++++.+||.+||+.||.+|+     ++
T Consensus       169 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  245 (323)
T cd05571         169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDA  245 (323)
T ss_pred             CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCH
Confidence            467899999999999999999999999887776655444332   2345667899999999999999999999     79


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      .++++|+||....+...
T Consensus       246 ~~ll~h~~f~~~~~~~~  262 (323)
T cd05571         246 KEIMEHRFFASINWQDV  262 (323)
T ss_pred             HHHHcCCCcCCCCHHHH
Confidence            99999999998766544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=3.1e-15  Score=118.36  Aligned_cols=120  Identities=23%  Similarity=0.320  Sum_probs=101.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC------eEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ------HVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~------~~~lv~  195 (249)
                      ...+.|.++.+|.+....+++.+++|.+...... ...+.+|+.+++.+.  +|+||+++++++....      .+|+||
T Consensus        12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~~~--~h~~i~~~~~~~~~~~~~~~~~~~~lv~   88 (275)
T cd06608          12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYS--NHPNIATFYGAFIKKNPPGNDDQLWLVM   88 (275)
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhc--CCCChheEEEEEEecCCCCcceEEEEEE
Confidence            4567788899999998888999999998765432 256788998888773  4999999999997644      499999


Q ss_pred             eccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++++|.+++...    +.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~  148 (275)
T cd06608          89 ELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK  148 (275)
T ss_pred             EcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc
Confidence            999999999998752    46899999999999999999999       99999999964

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.64  E-value=3.5e-15  Score=119.38  Aligned_cols=120  Identities=20%  Similarity=0.275  Sum_probs=100.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....+++.+|+|.+...... ...+.+|+.++..+.  +|+|++++++++...     ...|+|||
T Consensus        28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~e~~~l~~l~--~h~ni~~~~~~~~~~~~~~~~~~~lv~e  104 (291)
T cd06639          28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV-DEEIEAEYNILQSLP--NHPNVVKFYGMFYKADKLVGGQLWLVLE  104 (291)
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEecccccH-HHHHHHHHHHHHHhc--CCCCeEEEEEEEEeccccCCCeeEEEEE
Confidence            4578889999999998889999999998654221 245667888887763  499999999998753     46899999


Q ss_pred             ccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |++||+|.++++.    .+.+++..++.++.|++.|+.|||       |+||+||++..
T Consensus       105 y~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~  163 (291)
T cd06639         105 LCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT  163 (291)
T ss_pred             ECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence            9999999998863    346899999999999999999999       89999999964

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.64  E-value=2e-15  Score=112.88  Aligned_cols=116  Identities=19%  Similarity=0.126  Sum_probs=87.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---------hc-----------------HHHHHHHHHHhhhcCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---------QN-----------------FGKEINILKELTELHH  175 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------~~-----------------~~~e~~~~~~~~~~~h  175 (249)
                      +.+|.|+++.||.+.+. +|+.||+|+++.......         ..                 ..+|.+.+..+.   +
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---~   78 (190)
T cd05147           3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV---T   78 (190)
T ss_pred             CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH---H
Confidence            46788999999999886 899999999976432110         11                 134778888776   6


Q ss_pred             CCeeeeeEeEEeCCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh-h-------cCCccceeee
Q psy4166         176 ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYF-H-------DFTPWSFVIL  243 (249)
Q Consensus       176 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~yl-h-------d~kp~nili~  243 (249)
                      +++.....+.. . ..+|||||++|+++...+...+.+++.++..++.|++.++.|+ |       |+||+|||+.
T Consensus        79 ~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~  152 (190)
T cd05147          79 AGIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH  152 (190)
T ss_pred             CCCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE
Confidence            66543332222 2 2389999999988876655556799999999999999999998 6       9999999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PTZ00284 protein kinase; Provisional

Probab=99.64  E-value=2.3e-15  Score=128.15  Aligned_cols=121  Identities=15%  Similarity=0.227  Sum_probs=99.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhc---CCCCeeeeeEeEEeC-CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTEL---HHENVVELLHCKESD-QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~---~h~niv~l~~~~~~~-~~~~lv~e~  197 (249)
                      ..+|.|.+|.||++.+..+++.||+|+++.... .......|+.+++.+...   +|.++++++++|... .++|+|||+
T Consensus       135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~  213 (467)
T PTZ00284        135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK  213 (467)
T ss_pred             EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEec
Confidence            357899999999999988999999999964321 123456677777766522   356799999988764 579999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      + |++|.+++.+.+.+++..++.++.|++.||.|||        |+||+|||+..
T Consensus       214 ~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~  267 (467)
T PTZ00284        214 Y-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMET  267 (467)
T ss_pred             c-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEec
Confidence            8 7899999998888999999999999999999999        89999999964

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.64  E-value=2.9e-15  Score=119.11  Aligned_cols=119  Identities=16%  Similarity=0.149  Sum_probs=97.0

Q ss_pred             ccccCCCCcceeeccCCCCCC----eeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ----HVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~----~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....++.    .||+|.+....... .+.+.+|+.+++.+.   |+||+++++++.. ...+++||
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~-~~~~l~~~   88 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG---SPYVCRLLGICLT-STVQLVTQ   88 (279)
T ss_pred             eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcC---CCCCceEEEEEcC-CCcEEEEE
Confidence            457889999999987655554    48999886543222 245677877777665   9999999998875 45789999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~  144 (279)
T cd05109          89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS  144 (279)
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence            99999999999874 46999999999999999999999       99999999954

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.64  E-value=3.4e-15  Score=118.89  Aligned_cols=121  Identities=24%  Similarity=0.297  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES------DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~~lv~  195 (249)
                      ...+.|.++.+|.+.+..+++.+|+|.+...... ...+..|+.+++.+.  +|+||+++++++..      ...+|++|
T Consensus        22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~e~~~l~~~~--~h~~i~~~~~~~~~~~~~~~~~~~~iv~   98 (282)
T cd06636          22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEINMLKKYS--HHRNIATYYGAFIKKSPPGHDDQLWLVM   98 (282)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH-HHHHHHHHHHHHHhc--CCCcEEEEeeehhcccccCCCCEEEEEE
Confidence            4568889999999999889999999998654322 245677888877764  59999999999853      46799999


Q ss_pred             eccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++...  ..+++..+..++.|++.|+.|||       |++|+||++...
T Consensus        99 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~  157 (282)
T cd06636          99 EFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN  157 (282)
T ss_pred             EeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence            999999999999864  34888999999999999999999       999999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.64  E-value=4.1e-15  Score=119.15  Aligned_cols=119  Identities=23%  Similarity=0.305  Sum_probs=100.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|++....+++.||+|.+.......  ...+.+|+.+++.+.   |+||+++++++.+...+|+||||++
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~   84 (294)
T PLN00009          8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ---HGNIVRLQDVVHSEKRLYLVFEYLD   84 (294)
T ss_pred             EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc---CCCEeeEEEEEecCCeEEEEEeccc
Confidence            45677888999999988899999999986543221  245678888888876   9999999999999999999999995


Q ss_pred             CCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|.+++.....  +++..+..++.|++.|+.|||       |++|+||++..
T Consensus        85 -~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~  137 (294)
T PLN00009         85 -LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR  137 (294)
T ss_pred             -ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC
Confidence             588888876543  578889999999999999999       99999999963

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.64  E-value=1.1e-15  Score=122.31  Aligned_cols=90  Identities=24%  Similarity=0.347  Sum_probs=70.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++|||||||++|||++|.+||...+.......+..........+..++.++.+++.+||..||++||+++++++|
T Consensus       190 ~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         190 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             CCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            34778999999999999999999999877654443333222222223345678899999999999999999999999999


Q ss_pred             CCCCCCCCCC
Q psy4166          83 PFLQPLAPHP   92 (249)
Q Consensus        83 ~~~~~~~~~~   92 (249)
                      +||....+..
T Consensus       270 ~~~~~~~~~~  279 (292)
T cd06644         270 PFVSSVTSNR  279 (292)
T ss_pred             ccccccccch
Confidence            9998776554

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.64  E-value=3.7e-15  Score=120.64  Aligned_cols=116  Identities=22%  Similarity=0.294  Sum_probs=94.9

Q ss_pred             ccccCCCCcceeeccCC--CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSP--APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||++...  .++..||+|.+.....  ...+.+|+.+++.++   ||||+++++++..  ...+|+||||
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELK---HPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCC---CCCeeeEEEEEeccCCCeEEEEEee
Confidence            46788999999999754  4668899999865432  245678898888877   9999999999853  5679999999


Q ss_pred             cCCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         198 CNGGDLADYLVSK---------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       198 ~~~g~L~~~l~~~---------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +. ++|.+++...         ..+++..++.++.|++.|+.|||       |+||+|||+.
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~  142 (317)
T cd07867          82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM  142 (317)
T ss_pred             eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEc
Confidence            96 5888888532         14788999999999999999999       9999999984

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.64  E-value=3.9e-15  Score=116.62  Aligned_cols=120  Identities=21%  Similarity=0.364  Sum_probs=105.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.++.+....++..+|+|++.....  ...+.+.+|++.++.++   |+|++++.+.+......++||||++
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~~~~~~~~~~~~~~~~lv~e~~~   82 (258)
T cd08215           6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN---HPNIIKYYESFEEKGKLCIVMEYAD   82 (258)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC---CCChhheEEEEecCCEEEEEEEecC
Confidence            346778889999999888899999999976543  23356778888888777   9999999999999999999999999


Q ss_pred             CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+.    ..+++..+..++.+++.|+.|||       |++|.||++..
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~  138 (258)
T cd08215          83 GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS  138 (258)
T ss_pred             CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC
Confidence            99999999874    56999999999999999999999       89999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0597|consensus

Probab=99.64  E-value=2.9e-16  Score=129.46  Aligned_cols=83  Identities=33%  Similarity=0.592  Sum_probs=72.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +++|+..+|.||+|||+|||.+|++||...+..++...+.+.   ++..|..++..+..|+.++|.+||.+|.++.+++.
T Consensus       174 e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d---~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  174 EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD---PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC---CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            689999999999999999999999999888777766655443   33446689999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      |||...
T Consensus       251 HpF~k~  256 (808)
T KOG0597|consen  251 HPFWKG  256 (808)
T ss_pred             ChHHhh
Confidence            999863

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=1.5e-15  Score=125.05  Aligned_cols=113  Identities=19%  Similarity=0.188  Sum_probs=98.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.+|.||++....++..||+|.....      ....|+.+++.+.   |+||+++++++......|+||||+. |
T Consensus        72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~-~  141 (357)
T PHA03209         72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVN---HPSVIRMKDTLVSGAITCMVLPHYS-S  141 (357)
T ss_pred             EEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCC---CCCCcChhheEEeCCeeEEEEEccC-C
Confidence            4678899999999999889999999975432      2356888888776   9999999999999999999999995 6


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       142 ~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~  192 (357)
T PHA03209        142 DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND  192 (357)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence            899988764 56899999999999999999999       99999999864

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.64  E-value=9e-16  Score=122.67  Aligned_cols=84  Identities=27%  Similarity=0.297  Sum_probs=64.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-C-----------------------CCCCCCCHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-P-----------------------KVPVGTSAE   57 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~~~   57 (249)
                      +..|+.++||||+||++|||++|++||.+.+..+....+......+ +                       .....+++.
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (290)
T cd07862         183 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDEL  262 (290)
T ss_pred             CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHH
Confidence            4568899999999999999999999999877655433322111100 0                       011246788


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      +.+|+.+||+.||++||++.++++||||
T Consensus       263 ~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         263 GKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            8999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.64  E-value=2.2e-15  Score=119.22  Aligned_cols=119  Identities=18%  Similarity=0.271  Sum_probs=97.3

Q ss_pred             ccccCCCCcceeeccCCCC---CCeeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAP---SQHVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+.....   ...+|+|...... ....+.+.+|+.+++.+.   |+||+++++++.+ ...|+||||
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~~~~~~~~~-~~~~lv~e~   87 (270)
T cd05056          12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD---HPHIVKLIGVITE-NPVWIVMEL   87 (270)
T ss_pred             eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC---CCchhceeEEEcC-CCcEEEEEc
Confidence            4567888899998865432   4568999886543 222356788888888776   9999999998876 457899999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|+|.+++.+.+ .+++..+..++.+++.|+.|||       |+||+||++..
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~  142 (270)
T cd05056          88 APLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS  142 (270)
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec
Confidence            99999999998754 4899999999999999999999       99999999975

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.63  E-value=5.4e-15  Score=116.55  Aligned_cols=121  Identities=25%  Similarity=0.341  Sum_probs=104.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....++..+|+|++...... ..+.+.+|+..++.++   |+||+++++.+......|++|||++|
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~iv~e~~~~   83 (267)
T cd06610           7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN---HPNVVKYYTSFVVGDELWLVMPYLSG   83 (267)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC---CCCEEEEEEEEeeCCEEEEEEeccCC
Confidence            4567788899999988888999999998754322 2356778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSK---GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|.+++...   +.+++..+..++.|++.|+.|||       |++|+||++...
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~  138 (267)
T cd06610          84 GSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGED  138 (267)
T ss_pred             CcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC
Confidence            9999999874   35899999999999999999999       999999998743

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.63  E-value=1.8e-15  Score=124.47  Aligned_cols=117  Identities=21%  Similarity=0.324  Sum_probs=97.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.......  ...+.+|+.+++.++   ||||+++++++...      ..+|+
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~~l   99 (355)
T cd07874          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIISLLNVFTPQKSLEEFQDVYL   99 (355)
T ss_pred             EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC---CCchhceeeeeeccccccccceeEE
Confidence            56789999999999998899999999987543221  245667888888776   99999999988643      35899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+++ +|.+.+..  .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       100 v~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~  154 (355)
T cd07874         100 VMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS  154 (355)
T ss_pred             Ehhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC
Confidence            9999964 78887754  4899999999999999999999       99999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.63  E-value=3.5e-15  Score=119.50  Aligned_cols=120  Identities=20%  Similarity=0.280  Sum_probs=100.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe-----EEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQH-----VYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~-----~~lv  194 (249)
                      ..++.|.++.+|++....+++.||+|.+.......  ...+.+|+.+++.+.  +|+||+++++++.....     .|++
T Consensus         7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~~~~~~lv   84 (295)
T cd07837           7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS--ESIYIVRLLDVEHVEEKNGKPSLYLV   84 (295)
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc--CCCCccceeeeEeecCCCCCceEEEE
Confidence            45678889999999998899999999887543221  245778999888875  47999999999987665     8999


Q ss_pred             EeccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSK-----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++ +|.+++...     ..+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~  145 (295)
T cd07837          85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK  145 (295)
T ss_pred             eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec
Confidence            999985 899988753     24799999999999999999999       99999999975

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.63  E-value=1.1e-15  Score=121.65  Aligned_cols=87  Identities=26%  Similarity=0.335  Sum_probs=69.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++||||+||++|||++|++||...+.......+..........+..++.++.+||.+||..||.+||+++++++|
T Consensus       183 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         183 RPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             CCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            45778999999999999999999999877665543333333222333455688999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          83 PFLQPLA   89 (249)
Q Consensus        83 ~~~~~~~   89 (249)
                      +||....
T Consensus       263 ~~~~~~~  269 (282)
T cd06643         263 PFVTVNS  269 (282)
T ss_pred             CCEeccC
Confidence            9998543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.63  E-value=4.2e-15  Score=118.32  Aligned_cols=120  Identities=15%  Similarity=0.169  Sum_probs=97.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.+|.+|++.+..+++.||+|++......+ ...+..|+.+...  ..+|+||+++++++......|++|||++ 
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~iv~~~~~~~~~~~~~lv~e~~~-   83 (283)
T cd06617           7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMR--SVDCPYTVTFYGALFREGDVWICMEVMD-   83 (283)
T ss_pred             EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHH--HcCCCCeeeeeEEEecCCcEEEEhhhhc-
Confidence            45688899999999999999999999997653322 2334455554322  2359999999999999999999999996 


Q ss_pred             CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      |+|.+++.+.    ..+++..+..++.|++.|+.|||        |+||+||++..
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~  139 (283)
T cd06617          84 TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR  139 (283)
T ss_pred             ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence            6888888652    35899999999999999999999        78999999854

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.63  E-value=4e-15  Score=121.51  Aligned_cols=121  Identities=21%  Similarity=0.273  Sum_probs=97.1

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv  194 (249)
                      ..+|.|.+|.+|.+...     .+++.||+|++......+ .+.+.+|+.++..+.  +|+||+++++++.. ...+|++
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~--~h~niv~~~~~~~~~~~~~~~v   90 (337)
T cd05054          13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG--HHLNVVNLLGACTKPGGPLMVI   90 (337)
T ss_pred             cccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc--cCcchhheeeeEecCCCCEEEE
Confidence            46788999999988632     346789999987543222 245667888888773  49999999998764 4679999


Q ss_pred             EeccCCCCHHHHHHhc-------------------------------------------------------------CCC
Q psy4166         195 MEFCNGGDLADYLVSK-------------------------------------------------------------GTL  213 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~-------------------------------------------------------------~~~  213 (249)
                      |||+++|+|.+++...                                                             ..+
T Consensus        91 ~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  170 (337)
T cd05054          91 VEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPL  170 (337)
T ss_pred             EecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCC
Confidence            9999999999999652                                                             147


Q ss_pred             CHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         214 SEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       214 ~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       171 ~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~  208 (337)
T cd05054         171 TLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE  208 (337)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC
Confidence            88999999999999999999       99999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.63  E-value=3.4e-15  Score=118.20  Aligned_cols=120  Identities=17%  Similarity=0.182  Sum_probs=95.0

Q ss_pred             ccccCCCCcceeeccCCCCCC--eeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ--HVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKES------DQHV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~--~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~  191 (249)
                      ..++.|.++.+|.+.....+.  .+|+|.+......  ..+.+.+|+.+++.++   |+||+++++++..      ....
T Consensus         5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD---HPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEccCCcccCCCCc
Confidence            356888999999987765554  6899988654222  2245677888888776   9999999997643      2357


Q ss_pred             EEEEeccCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         192 YLVMEFCNGGDLADYLVSK------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|||+++|+|.+++...      ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~  147 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE  147 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC
Confidence            9999999999999988532      24789999999999999999999       99999999853

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.63  E-value=4e-15  Score=120.32  Aligned_cols=119  Identities=21%  Similarity=0.298  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCC--CCCeeEEEEeeccc---ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA--PSQHVAIKRITKKN---LAKTQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv  194 (249)
                      ..++.|.++.+|.+....  .+..||+|.+....   ....+...+|+.+++.++   ||||+++++++.+.  ..+|+|
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv   82 (316)
T cd07842           6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK---HENVVSLVEVFLEHADKSVYLL   82 (316)
T ss_pred             EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC---CCCccceEEEEeCCCCceEEEE
Confidence            457788899999999877  89999999998643   122245677888888776   99999999999988  889999


Q ss_pred             EeccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSK-----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++ ++|.+++...     +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        83 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~  143 (316)
T cd07842          83 FDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMG  143 (316)
T ss_pred             EeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcC
Confidence            99996 4788877643     25889999999999999999999       99999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.63  E-value=1.1e-15  Score=123.76  Aligned_cols=87  Identities=25%  Similarity=0.487  Sum_probs=73.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHH-HHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFE-QLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~i~   80 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..++...+....   +..+..++.++.+++.+||+.||.+|+++. +++
T Consensus       170 ~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         170 GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN---PCYPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            4678999999999999999999999999888776655544332   334556889999999999999999999986 899


Q ss_pred             cCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPH   91 (249)
Q Consensus        81 ~~~~~~~~~~~   91 (249)
                      .||||....+.
T Consensus       247 ~h~~~~~~~~~  257 (316)
T cd05619         247 QHPFFREIDWS  257 (316)
T ss_pred             cCcccCCCCHH
Confidence            99999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0582|consensus

Probab=99.63  E-value=5e-16  Score=124.56  Aligned_cols=88  Identities=23%  Similarity=0.280  Sum_probs=70.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC-------CCCCCCHHHHHHHHHhhhhCcccCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK-------VPVGTSAELKELLLGLLKRNAMDRI   74 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~   74 (249)
                      ..+|+.|+||||||++..||.+|..||....+..+..+.....++.+.       ....++..++++|..||++||.+||
T Consensus       206 ~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRp  285 (516)
T KOG0582|consen  206 LHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRP  285 (516)
T ss_pred             ccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCC
Confidence            468999999999999999999999999988876654433333322111       1134678899999999999999999


Q ss_pred             CHHHHhcCCCCCCCC
Q psy4166          75 SFEQLFAHPFLQPLA   89 (249)
Q Consensus        75 ~~~~i~~~~~~~~~~   89 (249)
                      +++++++|+||+...
T Consensus       286 tAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  286 TASKLLKHAFFKKAK  300 (516)
T ss_pred             CHHHHhccHHHhhcc
Confidence            999999999998543

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.63  E-value=1.1e-15  Score=119.90  Aligned_cols=84  Identities=25%  Similarity=0.386  Sum_probs=65.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++|||||||++|+|++|+.||...+.......+..........+..++.++.+++.+||+.||++||++.+++.
T Consensus       173 ~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         173 EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            35678899999999999999999999987665443332222222222334457789999999999999999999999999


Q ss_pred             CCCC
Q psy4166          82 HPFL   85 (249)
Q Consensus        82 ~~~~   85 (249)
                      |+||
T Consensus       253 ~~~~  256 (256)
T cd06612         253 HPFI  256 (256)
T ss_pred             CCCC
Confidence            9997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.63  E-value=4.3e-15  Score=118.82  Aligned_cols=120  Identities=17%  Similarity=0.231  Sum_probs=96.9

Q ss_pred             ccccCCCCcceeeccCCC-----CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-----PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.++.+|.+....     ....+|+|.+...... ....+.+|+.+++.++   ||||+++++.+...+..|++|
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~   82 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN---HPHVIKLYGACSQDGPLLLIV   82 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC---CCCEeeEEEEEecCCCcEEEE
Confidence            356778888998876432     3356888888654322 2245778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK------------------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++...                        +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~  162 (290)
T cd05045          83 EYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAE  162 (290)
T ss_pred             EecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcC
Confidence            999999999998752                        24778899999999999999999       99999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=1.3e-15  Score=121.19  Aligned_cols=87  Identities=23%  Similarity=0.320  Sum_probs=69.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..++.++|+||+||++|||++|++||.+.+.......+..........+..++.++.+++.+||+.+|.+||++.++++|
T Consensus       183 ~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         183 NPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            45778999999999999999999999887665544333333322333455688999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          83 PFLQPLA   89 (249)
Q Consensus        83 ~~~~~~~   89 (249)
                      +|+....
T Consensus       263 ~~~~~~~  269 (280)
T cd06611         263 PFVSDQS  269 (280)
T ss_pred             hhhcccc
Confidence            9998653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.63  E-value=6.4e-15  Score=115.90  Aligned_cols=118  Identities=18%  Similarity=0.258  Sum_probs=98.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..+|+|.+..... ..+.+.+|+.+++.++   |+|++++++++. ....|++|||++++
T Consensus        12 ~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~---~~~i~~~~~~~~-~~~~~lv~e~~~~~   85 (260)
T cd05070          12 KKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLR---HDKLVQLYAVVS-EEPIYIVTEYMSKG   85 (260)
T ss_pred             heeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcC---CCceEEEEeEEC-CCCcEEEEEecCCC
Confidence            45788889999988654 566799999876433 2356788999988877   999999999875 45689999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...  +.+++..+..++.+++.|+.|||       |+||+||++...
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~  138 (260)
T cd05070          86 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDG  138 (260)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCC
Confidence            999999764  35899999999999999999999       999999999653

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.63  E-value=1.9e-15  Score=119.25  Aligned_cols=84  Identities=31%  Similarity=0.466  Sum_probs=67.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|+||+||++|+|++|..||...+.......+.......+..+..++.++.+||.+||..+|.+||++.+++.
T Consensus       182 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         182 ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            35678899999999999999999999987655433322322223334556678999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          82 HPFL   85 (249)
Q Consensus        82 ~~~~   85 (249)
                      ||||
T Consensus       262 ~~~~  265 (265)
T cd06631         262 HDFL  265 (265)
T ss_pred             CCCC
Confidence            9997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.63  E-value=1.4e-15  Score=121.64  Aligned_cols=83  Identities=22%  Similarity=0.342  Sum_probs=65.0

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .++.++||||+||++|||++|++||...........+..........+...+..+.++|.+||+.+|++||++.++++||
T Consensus       209 ~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~  288 (291)
T cd06639         209 SYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP  288 (291)
T ss_pred             ccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence            46889999999999999999999998776544333232222222223445678899999999999999999999999999


Q ss_pred             CCC
Q psy4166          84 FLQ   86 (249)
Q Consensus        84 ~~~   86 (249)
                      ||+
T Consensus       289 ~~~  291 (291)
T cd06639         289 FIK  291 (291)
T ss_pred             ccC
Confidence            984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.63  E-value=6e-15  Score=115.79  Aligned_cols=116  Identities=26%  Similarity=0.341  Sum_probs=96.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeE-EeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCK-ESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~-~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|++..  .+..+|+|.+.....  .+.+.+|+.+++.++   |+|++++++++ ......|++|||+++
T Consensus        12 ~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~lv~e~~~~   84 (256)
T cd05082          12 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT--AQAFLAEASVMTQLR---HSNLVQLLGVIVEEKGGLYIVTEYMAK   84 (256)
T ss_pred             eeecccCCCeEEEEEE--cCCcEEEEEeCCCch--HHHHHHHHHHHHhCC---CCCeeeEEEEEEcCCCceEEEEECCCC
Confidence            4567788889988754  478899998864322  245778888888776   99999999875 456679999999999


Q ss_pred             CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+.+  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~  137 (256)
T cd05082          85 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE  137 (256)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC
Confidence            99999998754  3788999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.62  E-value=1.2e-15  Score=123.64  Aligned_cols=87  Identities=24%  Similarity=0.504  Sum_probs=72.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH-HHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF-EQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~i~   80 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..++...+...   .+..+..++.++++||.+||+.||.+|+++ ++++
T Consensus       170 ~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         170 GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD---TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            467899999999999999999999999988877665544332   334456689999999999999999999997 5899


Q ss_pred             cCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPH   91 (249)
Q Consensus        81 ~~~~~~~~~~~   91 (249)
                      +|+||....+.
T Consensus       247 ~h~~f~~~~~~  257 (316)
T cd05620         247 GHPFFKTINWT  257 (316)
T ss_pred             cCCCcCCCCHH
Confidence            99999876544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.62  E-value=9.6e-16  Score=124.32  Aligned_cols=88  Identities=24%  Similarity=0.439  Sum_probs=73.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF-----   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----   76 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..++...+...   ....+..++.++.+|+++||+.||.+|+++     
T Consensus       170 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  246 (320)
T cd05590         170 EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND---EVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGG  246 (320)
T ss_pred             CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCC
Confidence            457889999999999999999999999988877665544432   233455689999999999999999999997     


Q ss_pred             -HHHhcCCCCCCCCCCC
Q psy4166          77 -EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 -~~i~~~~~~~~~~~~~   92 (249)
                       ++++.||||....+..
T Consensus       247 ~~~~~~h~~f~~~~~~~  263 (320)
T cd05590         247 EEAILRHPFFKELDWEK  263 (320)
T ss_pred             HHHHHcCCCcCCCCHHH
Confidence             8999999999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG4717|consensus

Probab=99.62  E-value=9.5e-16  Score=125.33  Aligned_cols=89  Identities=25%  Similarity=0.418  Sum_probs=76.4

Q ss_pred             CCCCCCc-chhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           1 MSMKYDA-KADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         1 ~~~~y~~-~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +|..|+. ++||||||||||-|..|++||...++.+...++-..   ...+|..++.+|++||..||..||.+|.+.++|
T Consensus       191 LGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC---KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI  267 (864)
T KOG4717|consen  191 LGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC---KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEI  267 (864)
T ss_pred             hcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc---cccCchhhhHHHHHHHHHHHhcCchhhccHHHH
Confidence            5778886 799999999999999999999999888876655332   345677899999999999999999999999999


Q ss_pred             hcCCCCCCCCCCC
Q psy4166          80 FAHPFLQPLAPHP   92 (249)
Q Consensus        80 ~~~~~~~~~~~~~   92 (249)
                      ..++|++......
T Consensus       268 ~s~~Wlq~~D~~~  280 (864)
T KOG4717|consen  268 VSTSWLQAGDRGL  280 (864)
T ss_pred             hccccccCCCCCc
Confidence            9999999765443

>KOG0596|consensus

Probab=99.62  E-value=5.2e-16  Score=127.46  Aligned_cols=82  Identities=28%  Similarity=0.355  Sum_probs=58.8

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC--CCCCCCC-CHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV--PKVPVGT-SAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .+.++||||+|||||+|+.|++||..--.  ....+.....+.  .++|..- ..++.++++.||.+||++||++.++++
T Consensus       549 i~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  549 ISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             ecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            56789999999999999999999964322  111122211111  1222221 234999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      |||++..
T Consensus       627 hpFl~~~  633 (677)
T KOG0596|consen  627 HPFLQIQ  633 (677)
T ss_pred             Ccccccc
Confidence            9999853

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.62  E-value=2.7e-15  Score=119.52  Aligned_cols=119  Identities=24%  Similarity=0.344  Sum_probs=101.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....++..||+|.+.......  ...+.+|+++++.++   ||||+++++++.+....|+||||+.
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~   82 (284)
T cd07860           6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---HPNIVKLLDVIHTENKLYLVFEFLH   82 (284)
T ss_pred             eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC---CCCCcchhhhcccCCcEEEEeeccc
Confidence            45677888999999988899999999987543221  245778888888877   9999999999999999999999995


Q ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|.+++...  +.+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        83 -~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~  135 (284)
T cd07860          83 -QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT  135 (284)
T ss_pred             -cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence             6899998763  45899999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.62  E-value=5.5e-15  Score=117.59  Aligned_cols=119  Identities=15%  Similarity=0.157  Sum_probs=91.1

Q ss_pred             ccccCCCCcceeeccCCCCCC----eeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ----HVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~----~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.++.+|.+....++.    .+++|.+....... ...+..|+..++.   ++||||+++++++. ....+++||
T Consensus        13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~---l~h~~iv~~~~~~~-~~~~~~i~e   88 (279)
T cd05111          13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS---LDHAYIVRLLGICP-GASLQLVTQ   88 (279)
T ss_pred             cccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc---CCCCCcceEEEEEC-CCccEEEEE
Confidence            467888999999887766665    46777764322111 1233444445444   45999999999875 456789999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        89 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~  144 (279)
T cd05111          89 LSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS  144 (279)
T ss_pred             eCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC
Confidence            99999999999864 46899999999999999999999       99999999954

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0198|consensus

Probab=99.62  E-value=2e-16  Score=125.15  Aligned_cols=82  Identities=29%  Similarity=0.475  Sum_probs=66.3

Q ss_pred             cchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166           7 AKADLYSVGTIVFQCLTGKAPFIAN-SPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus         7 ~~~DiwS~G~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      .++||||+||++.||+||++||... ...+....+.. ....|.+|..+++++++|+.+|+.+||++|||+++++.|||.
T Consensus       201 ~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~-~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  201 RESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGR-EDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             ccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            3899999999999999999999873 33222222222 224457888999999999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          86 QPLA   89 (249)
Q Consensus        86 ~~~~   89 (249)
                      ....
T Consensus       280 ~~~~  283 (313)
T KOG0198|consen  280 KQNS  283 (313)
T ss_pred             hccc
Confidence            8544

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.62  E-value=4.9e-15  Score=116.60  Aligned_cols=117  Identities=18%  Similarity=0.263  Sum_probs=97.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.. ..+..+|+|.+..... ....+.+|+.+++.+.   |+||+++++.+.. ...|++|||+++|
T Consensus        12 ~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~-~~~~~v~e~~~~~   85 (260)
T cd05073          12 KKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ---HDKLVKLHAVVTK-EPIYIITEFMAKG   85 (260)
T ss_pred             eEecCccceEEEEEEe-cCCccEEEEecCCChh-HHHHHHHHHHHHHhcC---CCCcceEEEEEcC-CCeEEEEEeCCCC
Confidence            4578888999998864 4566799998865432 2256778888888776   9999999999887 7899999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.  ..+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~  137 (260)
T cd05073          86 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA  137 (260)
T ss_pred             cHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence            999999864  34788899999999999999999       99999999854

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.62  E-value=1.5e-15  Score=123.29  Aligned_cols=89  Identities=21%  Similarity=0.367  Sum_probs=74.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+...+...+...   ....|..++.++.+++.+||+.||.+|++     .
T Consensus       175 ~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~  251 (323)
T cd05616         175 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH---NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGE  251 (323)
T ss_pred             CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCH
Confidence            467899999999999999999999999988877665544332   23446678999999999999999999997     4


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      .+++.|+||....|...
T Consensus       252 ~~i~~h~~~~~~~~~~~  268 (323)
T cd05616         252 RDIKEHAFFRYIDWEKL  268 (323)
T ss_pred             HHHhcCCCcCCCCHHHH
Confidence            89999999998776654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.62  E-value=4e-15  Score=118.81  Aligned_cols=120  Identities=21%  Similarity=0.285  Sum_probs=98.6

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.+|.+...     .++..+|+|.+....... ...+.+|+.+++.+.   ||||+++++++.+...+|++|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~---h~~iv~~~~~~~~~~~~~lv~   87 (288)
T cd05050          11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD---HPNIVKLLGVCAVGKPMCLLF   87 (288)
T ss_pred             ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC---CCchheEEEEEcCCCccEEEE
Confidence            45677888999987653     367889999987543221 245778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG----------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++....                      .+++..+..++.|++.|+.|||       |+||.||++..
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~  165 (288)
T cd05050          88 EYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGE  165 (288)
T ss_pred             ecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecC
Confidence            9999999999997532                      3678888999999999999999       89999999854

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.62  E-value=4e-15  Score=118.47  Aligned_cols=119  Identities=28%  Similarity=0.359  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|..+.+|.+....++..||+|++.......  ...+.+|+.+++.++   |+|++++++++.+....|++|||++
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~---~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN---HPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC---CCCccCHhheeccCCeEEEEEeccC
Confidence            45677888999999888899999999987653222  245677888888776   9999999999999999999999995


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|.+++....  .+++..+..++.|++.|+.|||       |++|+||++..
T Consensus        82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~  134 (283)
T cd07835          82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR  134 (283)
T ss_pred             -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC
Confidence             69999998765  6899999999999999999999       99999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.62  E-value=3.3e-16  Score=116.00  Aligned_cols=85  Identities=20%  Similarity=0.231  Sum_probs=61.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-H-HHHHHHhcccCCC---CCCCCCCH--HHHHHHHHhhhhCcccCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-Q-LKQYYEKNLVLVP---KVPVGTSA--ELKELLLGLLKRNAMDRI   74 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~-~~~~~~~~~~~~~---~~~~~~~~--~~~~li~~~l~~~p~~R~   74 (249)
                      +..|+.++|||||||++|||++|+.||...... . +...........+   ..+...+.  ++.+++.+||..||.+||
T Consensus        78 ~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp  157 (176)
T smart00750       78 GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRRE  157 (176)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhccccccc
Confidence            567999999999999999999999999765432 1 1222222111111   11122333  689999999999999999


Q ss_pred             CHHHHhcCCCCC
Q psy4166          75 SFEQLFAHPFLQ   86 (249)
Q Consensus        75 ~~~~i~~~~~~~   86 (249)
                      ++.+++.|+|+.
T Consensus       158 ~~~~ll~~~~~~  169 (176)
T smart00750      158 AANHYLAHCRAL  169 (176)
T ss_pred             CHHHHHHHHHHH
Confidence            999999998764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.62  E-value=5.4e-15  Score=119.17  Aligned_cols=120  Identities=28%  Similarity=0.355  Sum_probs=98.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--------eE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ--------HV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--------~~  191 (249)
                      ..++.|.++.+|.+....+++.||+|.+.......  ...+.+|+.+++.++   ||||+++++++....        ..
T Consensus        18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~~   94 (310)
T cd07865          18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK---HENVVNLIEICRTKATPYNRYKGSF   94 (310)
T ss_pred             EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC---CCCccceEEEEecccccccCCCceE
Confidence            56788999999999998899999999987543222  133467888888776   999999999886643        46


Q ss_pred             EEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         192 YLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+||||+. ++|.+++...+ .+++.++..++.|++.|+.|||       |+||+||++...
T Consensus        95 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~  155 (310)
T cd07865          95 YLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD  155 (310)
T ss_pred             EEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC
Confidence            99999996 58888887653 6899999999999999999999       999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.62  E-value=1.4e-15  Score=123.21  Aligned_cols=87  Identities=23%  Similarity=0.448  Sum_probs=73.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF-----   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----   76 (249)
                      +..|+.++|+||+||++|||++|+.||.+.+.......+...   .+..+..++.++.+||.+||..||.+|+++     
T Consensus       170 ~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~  246 (318)
T cd05570         170 YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED---EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGE  246 (318)
T ss_pred             CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC---CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCH
Confidence            467899999999999999999999999888776655444332   234466789999999999999999999999     


Q ss_pred             HHHhcCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPH   91 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~   91 (249)
                      .+++.|+||....+.
T Consensus       247 ~~ll~~~~~~~~~~~  261 (318)
T cd05570         247 QDIKGHPFFREIDWD  261 (318)
T ss_pred             HHHhcCCCcCCCCHH
Confidence            999999999887654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.62  E-value=4e-15  Score=122.84  Aligned_cols=118  Identities=19%  Similarity=0.310  Sum_probs=97.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.||.+.+...++.||+|.+......  ..+.+.+|+.+++.+.   ||||+++++++...      ..+|+
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~ii~~~~~~~~~~~~~~~~~~~l  106 (364)
T cd07875          30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYI  106 (364)
T ss_pred             EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC---CCCccccceeecccccccccCeEEE
Confidence            5688999999999999889999999998754222  2245667888887776   99999999987543      46899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||++ ++|.+++..  .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       107 v~e~~~-~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  162 (364)
T cd07875         107 VMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD  162 (364)
T ss_pred             EEeCCC-CCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC
Confidence            999996 588888864  3889999999999999999999       999999999643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0986|consensus

Probab=99.62  E-value=6.8e-16  Score=124.12  Aligned_cols=94  Identities=23%  Similarity=0.385  Sum_probs=75.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-EKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----   75 (249)
                      ++.|+.++||||+||++|||+.|+.||.......-...+ ++........+..+|++++++.+.+|++||.+|.+     
T Consensus       360 ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~g  439 (591)
T KOG0986|consen  360 NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEG  439 (591)
T ss_pred             CCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcC
Confidence            567999999999999999999999999866543222111 22223334567889999999999999999999995     


Q ss_pred             HHHHhcCCCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPLIP   95 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~~~   95 (249)
                      ++++.+||||..++|.....
T Consensus       440 a~evk~HpfFk~lnw~rlea  459 (591)
T KOG0986|consen  440 AQEVKEHPFFKDLNWRRLEA  459 (591)
T ss_pred             cchhhhCcccccCCHhHHhc
Confidence            77999999999999887654

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.62  E-value=8.7e-15  Score=116.64  Aligned_cols=123  Identities=22%  Similarity=0.289  Sum_probs=103.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe-----EEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQH-----VYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~-----~~lv  194 (249)
                      ..++.|.++.+|++....+++.||+|++......+  ...+.+|+.+++.+..++|+||+++++++.+...     +|++
T Consensus         5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~   84 (287)
T cd07838           5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV   84 (287)
T ss_pred             EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence            45678889999999988889999999997543222  2456678888888877779999999999988776     9999


Q ss_pred             EeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+. ++|.+++.+..  .+++..+..++.|++.|+.|||       |++|+||++..+
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~  143 (287)
T cd07838          85 FEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD  143 (287)
T ss_pred             ehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC
Confidence            99996 58999998753  4899999999999999999999       999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.62  E-value=4.5e-15  Score=116.30  Aligned_cols=120  Identities=16%  Similarity=0.215  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+.+..++..+|+|.+.......  ...+.+|+.+++.++   |+||+++++++.+....|+||||++
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd08530           6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN---HPNIISYKEAFLDGNKLCIVMEYAP   82 (256)
T ss_pred             eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC---CCCchhhhhhhccCCEEEEEehhcC
Confidence            45677888999999888899999999987643222  245667777777776   9999999999999999999999999


Q ss_pred             CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+    ...+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~  138 (256)
T cd08530          83 FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA  138 (256)
T ss_pred             CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec
Confidence            9999999977    245899999999999999999999       99999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.61  E-value=2.5e-15  Score=120.53  Aligned_cols=87  Identities=23%  Similarity=0.393  Sum_probs=69.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..++.++|+|||||++|+|++|+.||.+.+.......+..........+..+++.+.++|.+||..||.+||++.+++.|
T Consensus       190 ~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         190 KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            45778999999999999999999999887765433333222222233456688999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          83 PFLQPLA   89 (249)
Q Consensus        83 ~~~~~~~   89 (249)
                      +||....
T Consensus       270 ~~~~~~~  276 (296)
T cd06655         270 PFLKLAK  276 (296)
T ss_pred             hHhhhcc
Confidence            9998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.61  E-value=2.1e-15  Score=123.02  Aligned_cols=120  Identities=23%  Similarity=0.347  Sum_probs=100.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~  195 (249)
                      ..++.|.++.+|.+....++..||+|++.....  ...+.+.+|+.+++.++   |+||+++++++..    ...+|+||
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~lv~   87 (334)
T cd07855          11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK---HDNIIAIRDILRPPGADFKDVYVVM   87 (334)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC---CCCccCHHHhccccCCCCceEEEEE
Confidence            356778889999999999999999999875422  12245667888888776   9999999998763    45799999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+. |+|.+++...+.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        88 e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~  143 (334)
T cd07855          88 DLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED  143 (334)
T ss_pred             ehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            9995 699999988778999999999999999999999       999999998753

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.61  E-value=2.5e-15  Score=122.71  Aligned_cols=88  Identities=26%  Similarity=0.319  Sum_probs=64.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh------------------------cccCCC----CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK------------------------NLVLVP----KVPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~------------------------~~~~~~----~~~~~~   54 (249)
                      ..|+.++|||||||++|||++|++||.+.+.......+..                        .....+    ......
T Consensus       183 ~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (338)
T cd07859         183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNA  262 (338)
T ss_pred             cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCC
Confidence            5688899999999999999999999987664322111110                        000000    011246


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++++.+++.+||..||++||++++++.||||.....
T Consensus       263 ~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         263 DPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             ChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            788999999999999999999999999999986544

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.61  E-value=1.5e-15  Score=120.95  Aligned_cols=92  Identities=22%  Similarity=0.359  Sum_probs=71.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----C
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----S   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~   75 (249)
                      +..|+.++|+|||||++|||++|+.||...+.... ..............+..++..+.+++.+||..||.+|+     +
T Consensus       171 ~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~  250 (280)
T cd05608         171 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGN  250 (280)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCC
Confidence            46788999999999999999999999986543221 11222222223345567899999999999999999999     7


Q ss_pred             HHHHhcCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~   93 (249)
                      ++++++||||....+...
T Consensus       251 ~~~~l~h~~~~~~~~~~~  268 (280)
T cd05608         251 CDGLRTHPLFRDLNWRQL  268 (280)
T ss_pred             HHHHhcChhhhcCCHhHH
Confidence            899999999998766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.61  E-value=9.1e-15  Score=115.05  Aligned_cols=117  Identities=20%  Similarity=0.228  Sum_probs=95.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+..... ..+|+|.+..... ..+.+.+|+++++.+.   |+|++++++++. ....|++|||+++|
T Consensus        12 ~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~---h~~i~~~~~~~~-~~~~~~v~e~~~~~   85 (260)
T cd05069          12 VKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM-MPEAFLQEAQIMKKLR---HDKLVPLYAVVS-EEPIYIVTEFMGKG   85 (260)
T ss_pred             eeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc-cHHHHHHHHHHHHhCC---CCCeeeEEEEEc-CCCcEEEEEcCCCC
Confidence            3577888999998876444 4699998865432 2356778999888877   999999999875 45689999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+..  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~  137 (260)
T cd05069          86 SLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD  137 (260)
T ss_pred             CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC
Confidence            9999997643  4789999999999999999999       99999999854

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.61  E-value=8.5e-15  Score=118.16  Aligned_cols=120  Identities=23%  Similarity=0.316  Sum_probs=100.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....++..||+|.+.......  .....+|+.+++.++   |+||+++++++...  ..+|+||||
T Consensus        13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv~e~   89 (309)
T cd07845          13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR---HPNIVELKEVVVGKHLDSIFLVMEY   89 (309)
T ss_pred             eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC---CCCCcceEEEEecCCCCeEEEEEec
Confidence            45788899999999998899999999987543222  123567888888776   99999999998754  569999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++ ++|.+++... +.+++.++..++.|++.|+.|||       |+||+||++...
T Consensus        90 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~  144 (309)
T cd07845          90 CE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDK  144 (309)
T ss_pred             CC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            96 5899988863 56899999999999999999999       999999999753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.61  E-value=6.9e-15  Score=117.17  Aligned_cols=120  Identities=23%  Similarity=0.293  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccc--ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN--LAKTQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e~  197 (249)
                      ..++.|.++.+|++....+++.+|+|.+....  ....+.+.+|+.+++.+.   |+|++++++.+.+.  ...|+||||
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR---HPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc---CCCeeeheeeEecCCCCcEEEEecc
Confidence            45677889999999988889999999998753  122245678888888877   99999999999988  899999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++ ++|.+++.+. ..+++..+..++.|++.|+.|||       |++|+||++..+
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~  136 (287)
T cd07840          82 MD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINND  136 (287)
T ss_pred             cc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCC
Confidence            97 5999999776 56999999999999999999999       999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1094|consensus

Probab=99.61  E-value=1.3e-15  Score=125.99  Aligned_cols=119  Identities=21%  Similarity=0.254  Sum_probs=100.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      .+|+|.||.+.+|.-.. +..||+|.++...... +..|.+|+++|.+++   |||||+|.+.|...+.+++|||||++|
T Consensus       545 kiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk---hPNIveLvGVC~~DePicmI~EYmEnG  620 (807)
T KOG1094|consen  545 KIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLK---HPNIVELLGVCVQDDPLCMITEYMENG  620 (807)
T ss_pred             hhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccC---CCCeeEEEeeeecCCchHHHHHHHhcC
Confidence            47889999999887644 6899999998754433 478999999999887   999999999999999999999999999


Q ss_pred             CHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.++..  +.......++.||++|++||.       |+.+-|+|+--+
T Consensus       621 DLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e  673 (807)
T KOG1094|consen  621 DLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGE  673 (807)
T ss_pred             cHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCc
Confidence            99999998742  233445669999999999997       899999998543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.61  E-value=2e-15  Score=133.30  Aligned_cols=91  Identities=21%  Similarity=0.296  Sum_probs=74.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++|||||||++|||++|++||.+....+....+......++.....++..+.+++..||..||.+|+++.+++.
T Consensus       554 ~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~  633 (669)
T cd05610         554 GKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQ  633 (669)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHh
Confidence            56799999999999999999999999998887766554433333334444467889999999999999999999999999


Q ss_pred             CCCCCCCCCCC
Q psy4166          82 HPFLQPLAPHP   92 (249)
Q Consensus        82 ~~~~~~~~~~~   92 (249)
                      |+||....+..
T Consensus       634 h~~~~~~~~~~  644 (669)
T cd05610         634 HPLFHGVDWEN  644 (669)
T ss_pred             CHhhcCCCHHH
Confidence            99998775544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0579|consensus

Probab=99.61  E-value=3.1e-16  Score=131.03  Aligned_cols=121  Identities=20%  Similarity=0.305  Sum_probs=109.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      |..|.|+||.||.+.++.++-.-|.|.+.....+..+.+.-|+.|+..+.   ||+||+|++.|+..+.+||+.|||.||
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd---HP~ivkLl~ayy~enkLwiliEFC~GG  114 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD---HPVIVKLLSAYYFENKLWILIEFCGGG  114 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC---ChHHHHHHHHHhccCceEEEEeecCCc
Confidence            67889999999999999888888999998766666688899999999887   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      -+..++-. .+.++|.+++.+++|++.||.|||       |+|-.|||+.-.
T Consensus       115 AVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld  166 (1187)
T KOG0579|consen  115 AVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD  166 (1187)
T ss_pred             hHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec
Confidence            99888876 446999999999999999999999       999999998543

>KOG0667|consensus

Probab=99.61  E-value=6.4e-16  Score=129.21  Aligned_cols=91  Identities=24%  Similarity=0.372  Sum_probs=68.1

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC-------------------------------
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK-------------------------------   49 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------------   49 (249)
                      +|.+|+.+.||||||||++||++|.+.|.|++..+....+......++.                               
T Consensus       361 LGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~  440 (586)
T KOG0667|consen  361 LGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRG  440 (586)
T ss_pred             ccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeeccccc
Confidence            6889999999999999999999999999999885443333211110000                               


Q ss_pred             ------------------CC-----------CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          50 ------------------VP-----------VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        50 ------------------~~-----------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                                        .|           ..-...+.+|+++||++||.+|+|+.++++|||+......
T Consensus       441 ~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~  511 (586)
T KOG0667|consen  441 TKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSLE  511 (586)
T ss_pred             ccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccccc
Confidence                              01           0113457899999999999999999999999999855433

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.4e-15  Score=122.86  Aligned_cols=86  Identities=26%  Similarity=0.514  Sum_probs=71.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC---CHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI---SFEQ   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~~   78 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..+....+..   .....+..+++++.+||.+||..||.+|+   ++.+
T Consensus       167 ~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e  243 (312)
T cd05585         167 GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ---EPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQE  243 (312)
T ss_pred             CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc---CCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHH
Confidence            45789999999999999999999999998877665443332   23445667899999999999999999997   5899


Q ss_pred             HhcCCCCCCCCC
Q psy4166          79 LFAHPFLQPLAP   90 (249)
Q Consensus        79 i~~~~~~~~~~~   90 (249)
                      ++.||||....+
T Consensus       244 ~l~hp~~~~~~~  255 (312)
T cd05585         244 IKNHPFFSQLSW  255 (312)
T ss_pred             HHcCCCcCCCCH
Confidence            999999997644

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.61  E-value=3.9e-15  Score=121.63  Aligned_cols=119  Identities=25%  Similarity=0.332  Sum_probs=100.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv  194 (249)
                      ..++.|.++.+|.+.+..++..||+|.+.....  .....+.+|+.+++.++   |+||+++++++...     ..+|++
T Consensus        11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~ni~~~~~~~~~~~~~~~~~~~lv   87 (337)
T cd07858          11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD---HENVIAIKDIMPPPHREAFNDVYIV   87 (337)
T ss_pred             EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC---CCCccchHHheecccccccCcEEEE
Confidence            467788899999999989999999999875321  11234567888887776   99999999988654     358999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+. ++|.+++...+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 ~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~  143 (337)
T cd07858          88 YELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA  143 (337)
T ss_pred             EeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence            99995 799999988888999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.61  E-value=1.1e-14  Score=114.18  Aligned_cols=115  Identities=23%  Similarity=0.302  Sum_probs=96.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.  ..++.+|+|.+....  ..+.+.+|+.+++.++   |+||+++++++... ..|++|||+++|
T Consensus        12 ~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~-~~~~v~e~~~~~   83 (254)
T cd05083          12 EIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV--TAQAFLEETAVMTKLH---HKNLVRLLGVILHN-GLYIVMELMSKG   83 (254)
T ss_pred             eeeccCCCCceEecc--cCCCceEEEeecCcc--hHHHHHHHHHHHHhCC---CCCcCeEEEEEcCC-CcEEEEECCCCC
Confidence            456778888998764  478889999986432  2256778888888776   99999999998764 479999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++....  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~  135 (254)
T cd05083          84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE  135 (254)
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence            9999998753  4789999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.61  E-value=1.5e-15  Score=124.05  Aligned_cols=88  Identities=22%  Similarity=0.341  Sum_probs=72.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++||||+||++|||++|.+||.+.+.......+....   ...|..+++.+.++|++||+.||.+|+     ++
T Consensus       202 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~  278 (340)
T PTZ00426        202 NVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI---IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGA  278 (340)
T ss_pred             CCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCH
Confidence            4568899999999999999999999999887765544443322   234566889999999999999999996     89


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++||||....|..
T Consensus       279 ~~~~~hp~f~~~~~~~  294 (340)
T PTZ00426        279 QNVKEHPWFGNIDWVS  294 (340)
T ss_pred             HHHHcCCCcCCCCHHH
Confidence            9999999999876653

>KOG0614|consensus

Probab=99.61  E-value=4.6e-17  Score=132.47  Aligned_cols=119  Identities=24%  Similarity=0.356  Sum_probs=104.1

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      .|-|.||.|-++........+|+|++++....+.   +.+..|-++|..+.   .|.||+||..|.+..++|++||-|-|
T Consensus       428 LGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~---s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  428 LGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR---SDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             cccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC---chHHHHHHHHhccchhhhhhHHhhcC
Confidence            4667788887776655556799999988755443   44678888888877   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|...++.+|.|++..+++|+..+..|..|||       |+||||+|+-++
T Consensus       505 GElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~  556 (732)
T KOG0614|consen  505 GELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR  556 (732)
T ss_pred             chhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC
Confidence            999999999999999999999999999999999       999999998765

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.61  E-value=1.9e-14  Score=116.58  Aligned_cols=120  Identities=23%  Similarity=0.300  Sum_probs=100.5

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ...++.|.++.+|.+....++..+|+|.+.......   ...+.+|+++++.+.   |+|++++++++.+....|+||||
T Consensus        30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK---HPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC---CCCEEEEEEEEeeCCeEEEEEeC
Confidence            356788999999999888889999999987543222   234667888777766   99999999999999999999999


Q ss_pred             cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +. |+|.+++.. .+.+++.++..++.+++.|+.|||       |++|.||++..
T Consensus       107 ~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~  160 (317)
T cd06635         107 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE  160 (317)
T ss_pred             CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC
Confidence            96 588887765 456899999999999999999999       99999999964

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.61  E-value=2.4e-15  Score=119.70  Aligned_cols=91  Identities=29%  Similarity=0.498  Sum_probs=69.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++|+||+||++|||++|..||.+....................+..++.++.++|.+||..||.+|+     ++
T Consensus       170 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  249 (279)
T cd05633         170 GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGA  249 (279)
T ss_pred             CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCH
Confidence            3568899999999999999999999997654322221111222233345667899999999999999999999     59


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++|+||....+..
T Consensus       250 ~~~~~h~~~~~~~~~~  265 (279)
T cd05633         250 QEVKEHVFFKGIDWQQ  265 (279)
T ss_pred             HHHHhCccccCCCHhH
Confidence            9999999999866543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.61  E-value=4e-15  Score=121.84  Aligned_cols=117  Identities=25%  Similarity=0.361  Sum_probs=99.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-------------
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD-------------  188 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-------------  188 (249)
                      ..+|.|.++.+|.+....++..||+|.+........+.+.+|+.+++.++   ||||+++++++...             
T Consensus        11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~---h~~i~~~~~~~~~~~~~~~~~~~~~~~   87 (342)
T cd07854          11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD---HDNIVKVYEVLGPSGSDLTEDVGSLTE   87 (342)
T ss_pred             EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC---CCcchhhHhhhcccccccccccccccc
Confidence            45678889999999999999999999987655444456778888888876   99999999776543             


Q ss_pred             -CeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         189 -QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       189 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                       ...|+||||++ ++|.+++.+. .+++..++.++.|++.|+.|||       |+||+||++.
T Consensus        88 ~~~~~lv~e~~~-~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~  148 (342)
T cd07854          88 LNSVYIVQEYME-TDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN  148 (342)
T ss_pred             cceEEEEeeccc-ccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc
Confidence             36899999996 5999888654 5999999999999999999999       9999999996

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=2.3e-15  Score=119.09  Aligned_cols=83  Identities=27%  Similarity=0.418  Sum_probs=63.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++||||+||++|+|++|+.||...........+..........+..++.++.+|+.+||..||++||++.+++.|
T Consensus       193 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         193 ASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             CCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            35778899999999999999999999765544333322222222222233467899999999999999999999999999


Q ss_pred             CCC
Q psy4166          83 PFL   85 (249)
Q Consensus        83 ~~~   85 (249)
                      ||+
T Consensus       273 ~~~  275 (275)
T cd06608         273 PFI  275 (275)
T ss_pred             CCC
Confidence            996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.61  E-value=3.9e-15  Score=118.81  Aligned_cols=88  Identities=26%  Similarity=0.468  Sum_probs=70.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|+||+||++|||++|+.||...+.......+..........+...+..+.+|+.+||..+|++||++.+++.
T Consensus       189 ~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         189 RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            34688899999999999999999999988776555444443322222233447889999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |+||....
T Consensus       269 ~~~~~~~~  276 (285)
T cd06648         269 HPFLAKAG  276 (285)
T ss_pred             CcccccCC
Confidence            99998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.61  E-value=2.3e-15  Score=122.30  Aligned_cols=88  Identities=20%  Similarity=0.379  Sum_probs=73.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF-----   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----   76 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..+....+...   .+..|..++.++.+++.+||..||.+|++.     
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  251 (324)
T cd05587         175 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH---NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGE  251 (324)
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCH
Confidence            457889999999999999999999999988876665544332   334566789999999999999999999975     


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      ++++.||||....+..
T Consensus       252 ~~~~~hp~~~~~~~~~  267 (324)
T cd05587         252 RDIREHAFFRRIDWEK  267 (324)
T ss_pred             HHHhcCCCcCCCCHHH
Confidence            8999999999876654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0583|consensus

Probab=99.61  E-value=5.8e-15  Score=120.94  Aligned_cols=84  Identities=29%  Similarity=0.475  Sum_probs=70.9

Q ss_pred             CCC-CC-cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCC-CHHHHHHHHHhhhhCcccCCCHHH
Q psy4166           2 SMK-YD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT-SAELKELLLGLLKRNAMDRISFEQ   78 (249)
Q Consensus         2 ~~~-y~-~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~R~~~~~   78 (249)
                      +.+ |+ .++||||+||+||.|++|+.||...+...+...+.+   ....+|..+ ++++++|+++||..||.+|+++.+
T Consensus       195 ~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~---~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~  271 (370)
T KOG0583|consen  195 GKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK---GEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLE  271 (370)
T ss_pred             CCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc---CCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            345 76 689999999999999999999998777666555433   334556667 999999999999999999999999


Q ss_pred             HhcCCCCCCC
Q psy4166          79 LFAHPFLQPL   88 (249)
Q Consensus        79 i~~~~~~~~~   88 (249)
                      ++.|+||+..
T Consensus       272 i~~h~w~~~~  281 (370)
T KOG0583|consen  272 ILEHPWFQKE  281 (370)
T ss_pred             HhhChhhccC
Confidence            9999999964

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.61  E-value=1.5e-14  Score=116.62  Aligned_cols=119  Identities=24%  Similarity=0.311  Sum_probs=100.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....+++.||+|.+.......   .+.+.+|+.+++.++   ||||+++++++.+....|+||||+
T Consensus        21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~   97 (307)
T cd06607          21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR---HPNTIEYKGCYLREHTAWLVMEYC   97 (307)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC---CCCEEEEEEEEEeCCeEEEEHHhh
Confidence            46788889999999888889999999986543221   245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + |+|.+++.. .+.+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        98 ~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~  150 (307)
T cd06607          98 L-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE  150 (307)
T ss_pred             C-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC
Confidence            6 588787765 346899999999999999999999       89999999965

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.61  E-value=1.8e-15  Score=122.82  Aligned_cols=89  Identities=21%  Similarity=0.415  Sum_probs=74.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-------   74 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-------   74 (249)
                      +..|+.++||||+||++|||++|+.||.+.+.......+....   ...|..++.++.+++.+||..||++|+       
T Consensus       170 ~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~  246 (321)
T cd05591         170 ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD---VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQG  246 (321)
T ss_pred             CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCC
Confidence            4578999999999999999999999999888776655444332   234556889999999999999999999       


Q ss_pred             CHHHHhcCCCCCCCCCCCC
Q psy4166          75 SFEQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        75 ~~~~i~~~~~~~~~~~~~~   93 (249)
                      ++++++.||||....+...
T Consensus       247 ~~~~~~~hp~~~~~~~~~~  265 (321)
T cd05591         247 GEDAIKQHPFFKEIDWVLL  265 (321)
T ss_pred             CHHHHhcCCccCCCCHHHH
Confidence            8999999999988766543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.61  E-value=2.7e-15  Score=119.74  Aligned_cols=84  Identities=29%  Similarity=0.347  Sum_probs=63.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-----------------CC-------CCCCCCCHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-----------------VP-------KVPVGTSAE   57 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-----------------~~-------~~~~~~~~~   57 (249)
                      +..|+.++||||+||++|||++|++||.+.+.......+......                 .+       .....++..
T Consensus       181 ~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (288)
T cd07863         181 QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEES  260 (288)
T ss_pred             CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHH
Confidence            456889999999999999999999999877664432222111000                 00       011246788


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      +.+++.+||+.||.+||++.+++.||||
T Consensus       261 ~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         261 GAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.61  E-value=9.2e-15  Score=115.06  Aligned_cols=118  Identities=19%  Similarity=0.199  Sum_probs=93.3

Q ss_pred             ccCCCCcceeeccCC---CCCCeeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-eCCeEEEEEecc
Q psy4166         124 VSTSPPRPSSLLLSP---APSQHVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKE-SDQHVYLVMEFC  198 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-~~~~~~lv~e~~  198 (249)
                      ++.|.++.+|.+...   .....+|+|.+.... ....+.+.+|+.+++.++   ||||+++++++. .....|++|||+
T Consensus         3 lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~lv~e~~   79 (262)
T cd05058           3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFS---HPNVLSLLGICLPSEGSPLVVLPYM   79 (262)
T ss_pred             ccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCC---CCCcceEEEEeecCCCCcEEEEecC
Confidence            577888899877642   345679999885432 222345677888877766   999999999765 456789999999


Q ss_pred             CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .+|+|.+++.+.. .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~  133 (262)
T cd05058          80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE  133 (262)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence            9999999998753 4677888899999999999999       89999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.60  E-value=3.1e-15  Score=121.53  Aligned_cols=88  Identities=20%  Similarity=0.395  Sum_probs=72.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+....   +..|..++.++.++|.+||..||.+|+     ++
T Consensus       175 ~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  251 (324)
T cd05589         175 ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE---VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDA  251 (324)
T ss_pred             CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCH
Confidence            4578899999999999999999999999887766655443332   234567899999999999999999999     69


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      .+++.|+||....+..
T Consensus       252 ~~l~~~~~f~~~~~~~  267 (324)
T cd05589         252 EDVKKQPFFRDINWDD  267 (324)
T ss_pred             HHHhhCCCcCCCCHHH
Confidence            9999999998765443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.60  E-value=9e-15  Score=116.30  Aligned_cols=120  Identities=19%  Similarity=0.203  Sum_probs=98.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....++..||+|.+....... .....+|+..+..+.  +|+||+++++++.+.  +..|+||||+
T Consensus         5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~--~h~~i~~~~~~~~~~~~~~~~lv~e~~   82 (282)
T cd07831           5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS--PHPNILRLIEVLFDRKTGRLALVFELM   82 (282)
T ss_pred             eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC--CCCCccceEEEEecCCCCcEEEEEecC
Confidence            35677888999999988899999999987542221 123346766666553  599999999999987  8999999999


Q ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + |+|.+++... +.+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        83 ~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~  135 (282)
T cd07831          83 D-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD  135 (282)
T ss_pred             C-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC
Confidence            6 5888888764 46899999999999999999999       99999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.60  E-value=6.3e-15  Score=120.69  Aligned_cols=118  Identities=28%  Similarity=0.398  Sum_probs=98.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC------eEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ------HVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~------~~~l  193 (249)
                      ..+|.|.++.+|.+.+..++..||+|.+.+.....  ...+.+|+.+++.++   |+||+++++++....      .+|+
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~l   97 (343)
T cd07880          21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK---HENVIGLLDVFTPDLSLDRFHDFYL   97 (343)
T ss_pred             EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC---CCCccceeeeecCCccccccceEEE
Confidence            56788999999999988899999999986532221  245678888888877   999999999987543      4699


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+ |++|.+++... .+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        98 v~e~~-~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~  153 (343)
T cd07880          98 VMPFM-GTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE  153 (343)
T ss_pred             EEecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            99999 78999888754 5999999999999999999999       99999999964

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.60  E-value=2.7e-15  Score=122.24  Aligned_cols=87  Identities=18%  Similarity=0.369  Sum_probs=65.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--------------------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN--------------------------------------   43 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~--------------------------------------   43 (249)
                      +..|+.++|||||||++|||++|+.||...+..++...+...                                      
T Consensus       176 ~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (331)
T cd06649         176 GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFE  255 (331)
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHH
Confidence            457899999999999999999999999776554443221110                                      


Q ss_pred             ------ccCCCCC-CCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          44 ------LVLVPKV-PVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        44 ------~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                            ....+.. ...+++++++||.+||+.||++||++.++++|+||...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         256 LLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                  0001111 12367899999999999999999999999999999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.60  E-value=6.3e-15  Score=121.66  Aligned_cols=86  Identities=23%  Similarity=0.355  Sum_probs=63.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CC--------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VP--------------   48 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~--------------   48 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+......                   .+              
T Consensus       199 ~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (364)
T cd07875         199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV  278 (364)
T ss_pred             CCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccc
Confidence            467899999999999999999999999887654332211110000                   00              


Q ss_pred             ------CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          49 ------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        49 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                            ......+.++++||.+||+.||.+|||+.++++||||..
T Consensus       279 ~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         279 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             cccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                  001113467899999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.60  E-value=8.6e-15  Score=117.85  Aligned_cols=119  Identities=18%  Similarity=0.208  Sum_probs=96.5

Q ss_pred             ccccCCCCcceeeccCCCCCC----eeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ----HVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~----~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..++.|.++.+|.+....++.    .+|+|.+....... ...+.+|+.+++.+.   ||||+++++++... ..++++|
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~---h~niv~~~~~~~~~-~~~~v~e   88 (303)
T cd05110          13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD---HPHLVRLLGVCLSP-TIQLVTQ   88 (303)
T ss_pred             cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCcccEEEEEcCC-Cceeeeh
Confidence            467889999999987665655    46888876543222 234677888887776   99999999988754 5779999


Q ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++..+. .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        89 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~  144 (303)
T cd05110          89 LMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS  144 (303)
T ss_pred             hcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC
Confidence            999999999998754 5899999999999999999999       99999999964

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0197|consensus

Probab=99.60  E-value=1.7e-15  Score=123.91  Aligned_cols=76  Identities=28%  Similarity=0.500  Sum_probs=69.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||+||||+| |+.||.+.+..++...+.++.+.+.  |..+++++.++|..||+.+|++|||++.+.
T Consensus       379 ~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~--P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  379 GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR--PEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC--CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            468999999999999999999 9999999999999999988877654  778999999999999999999999988654

>KOG1152|consensus

Probab=99.60  E-value=2.7e-15  Score=123.94  Aligned_cols=122  Identities=25%  Similarity=0.304  Sum_probs=108.1

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeeccccc-c-----h--hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEE
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-K-----T--QNFGKEINILKELTELHHENVVELLHCKESDQHVY  192 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~-----~--~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~  192 (249)
                      +.+.|.|++|.|.++.++..+..|++|.+.+.+.- +     +  -.+-.|++||..++.=.|+||++++++|++++++|
T Consensus       566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy  645 (772)
T KOG1152|consen  566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY  645 (772)
T ss_pred             eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence            35789999999999999999999999999876432 1     1  23668999999887767999999999999999999


Q ss_pred             EEEec-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceee
Q psy4166         193 LVMEF-CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVI  242 (249)
Q Consensus       193 lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili  242 (249)
                      |+||- =+|-+|+++|..+..++|.+++.+++||..|+++||       |+|=||+++
T Consensus       646 l~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv  703 (772)
T KOG1152|consen  646 LETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV  703 (772)
T ss_pred             EEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE
Confidence            99996 568899999999888999999999999999999999       999999876

>KOG0696|consensus

Probab=99.60  E-value=9.9e-16  Score=122.16  Aligned_cols=122  Identities=20%  Similarity=0.233  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .++|.|++|.|.++.++.+...+|+|++++....+.   +....|-++|....  .-|.+++++.+|++.+.+|+||||+
T Consensus       355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~--kppFL~qlHScFQTmDRLyFVMEyv  432 (683)
T KOG0696|consen  355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG--KPPFLVQLHSCFQTMDRLYFVMEYV  432 (683)
T ss_pred             EEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCC--CCchHHHHHHHhhhhhheeeEEEEe
Confidence            467899999999999999999999999998754432   33456667765544  4689999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .||+|.-.|++-|+|.|..|..|+.+|+.||-+||       |+|..|+|+-.+
T Consensus       433 nGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e  486 (683)
T KOG0696|consen  433 NGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE  486 (683)
T ss_pred             cCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC
Confidence            99999999999999999999999999999999999       999999998654

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.60  E-value=9.3e-15  Score=116.41  Aligned_cols=121  Identities=19%  Similarity=0.265  Sum_probs=98.3

Q ss_pred             ccccCCCCcceeeccCCC-----CCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-----PSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-----~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|+++.+|.+....     .+..||+|++....... ...+.+|+.++..++   ||||+++++++.+....++++
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~---h~~iv~~~~~~~~~~~~~~~~   87 (283)
T cd05091          11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ---HPNIVCLLGVVTKEQPLSMIF   87 (283)
T ss_pred             HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC---CCCcCeEEEEEcCCCceEEEE
Confidence            356788899999876533     35789999987543221 245677888887776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++++|.+++..+                +.+++..+..++.|++.|+.|+|       |+||+||++...
T Consensus        88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~  160 (283)
T cd05091          88 SYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK  160 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence            999999999998632                24788889999999999999999       999999998643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=4.1e-15  Score=117.87  Aligned_cols=87  Identities=24%  Similarity=0.380  Sum_probs=68.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCC-CCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVG-TSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..++.++|||||||++|+|++|+.||.+.+.......+....  .+..+.. ++.++.+++.+||..+|++||++++++
T Consensus       172 ~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il  249 (274)
T cd06609         172 QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELL  249 (274)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence            3457889999999999999999999998776554443333322  2233333 788999999999999999999999999


Q ss_pred             cCCCCCCCCC
Q psy4166          81 AHPFLQPLAP   90 (249)
Q Consensus        81 ~~~~~~~~~~   90 (249)
                      .|+||.....
T Consensus       250 ~~~~~~~~~~  259 (274)
T cd06609         250 KHKFIKKAKK  259 (274)
T ss_pred             hChhhcCCCc
Confidence            9999986543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.60  E-value=3.4e-15  Score=120.19  Aligned_cols=88  Identities=22%  Similarity=0.360  Sum_probs=63.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-H-HHHHHHhcccCC--------------CC-----CC---------C
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-Q-LKQYYEKNLVLV--------------PK-----VP---------V   52 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~-~~~~~~~~~~~~--------------~~-----~~---------~   52 (249)
                      ..|+.++||||+||++|||++|..||.+..+. . +...........              +.     .+         .
T Consensus       179 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (303)
T cd07869         179 TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKL  258 (303)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhcc
Confidence            35788999999999999999999999875442 1 111111100000              00     00         1


Q ss_pred             CCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          53 GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        53 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ..++++.+|+.+||+.||.+|+|+.++++||||....+
T Consensus       259 ~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         259 SYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP  296 (303)
T ss_pred             CCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence            23568899999999999999999999999999987643

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0599|consensus

Probab=99.60  E-value=1.1e-15  Score=115.82  Aligned_cols=87  Identities=24%  Similarity=0.400  Sum_probs=71.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-EKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..+|+..+|.||+|||+|.++.|.+||......-..+++ ........+.+.+++...++||++||+.||.+|.|+++++
T Consensus       202 ~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~L  281 (411)
T KOG0599|consen  202 HPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEAL  281 (411)
T ss_pred             CCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHh
Confidence            568999999999999999999999999876554444444 3334444455667899999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      .||||.+.
T Consensus       282 aHpff~q~  289 (411)
T KOG0599|consen  282 AHPFFIQI  289 (411)
T ss_pred             cChHHHHH
Confidence            99999654

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.60  E-value=2.5e-14  Score=115.68  Aligned_cols=119  Identities=22%  Similarity=0.329  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+....++..||+|.+........   +.+.+|+.+++.++   |+|++++++++.+....|+||||+
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~  103 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK---HPNTIEYKGCYLKEHTAWLVMEYC  103 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC---CCCCccEEEEEEeCCEEEEEEecC
Confidence            457888899999998888999999999875433221   34567777777766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      . |+|.+++... +.+++.++..++.|++.|+.|||       |++|+||++..
T Consensus       104 ~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~  156 (313)
T cd06633         104 L-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE  156 (313)
T ss_pred             C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC
Confidence            5 5888888654 46899999999999999999999       99999999964

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.60  E-value=8.6e-15  Score=120.36  Aligned_cols=118  Identities=21%  Similarity=0.330  Sum_probs=98.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc--cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..++.|.++.++.+.+..+++.||+|.+.+...  .....+.+|+.+++.++   |+||++++++|...      .++|+
T Consensus        22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~l   98 (353)
T cd07850          22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN---HKNIIGLLNVFTPQKSLEEFQDVYL   98 (353)
T ss_pred             EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC---CCCCcceeeeeccCCCccccCcEEE
Confidence            467889999999999999999999999865321  22245667888888776   99999999988643      35899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+. ++|.+.+...  +++..+..++.|++.|+.|||       |+||+||++...
T Consensus        99 v~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~  154 (353)
T cd07850          99 VMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD  154 (353)
T ss_pred             EEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC
Confidence            999995 5999988754  899999999999999999999       999999999653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0666|consensus

Probab=99.60  E-value=1.2e-15  Score=117.51  Aligned_cols=121  Identities=20%  Similarity=0.291  Sum_probs=101.4

Q ss_pred             cccccCCCCcceeeccCCCCC----CeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEE
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPS----QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES-DQHVYL  193 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~----~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~l  193 (249)
                      .+.++.|.+|.||.+...+++    +.+|+|.+..++...  .....||+.+++.++   |||++.|-..|.. ...+|+
T Consensus        29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~---h~nvi~Lv~Vfl~~d~~v~l  105 (438)
T KOG0666|consen   29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK---HPNVISLVKVFLSHDKKVWL  105 (438)
T ss_pred             cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc---CCcchhHHHHHhccCceEEE
Confidence            467899999999999665543    378999987653322  355789999999988   9999999999877 788999


Q ss_pred             EEeccCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKG-----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +.||.+. +|.++|+.++     .++-..++.++-|++.|+.|||       |+||.|||+--+
T Consensus       106 ~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgd  168 (438)
T KOG0666|consen  106 LFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGD  168 (438)
T ss_pred             Eehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEecc
Confidence            9999986 9999998653     3888999999999999999999       999999998654

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.60  E-value=2e-15  Score=122.79  Aligned_cols=87  Identities=26%  Similarity=0.334  Sum_probs=63.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-----------------------------------C
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-----------------------------------V   47 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-----------------------------------~   47 (249)
                      .+|+.++|||||||++|||++|+.||..................                                   .
T Consensus       185 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T cd08227         185 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPR  264 (327)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcC
Confidence            46899999999999999999999999765543322111100000                                   0


Q ss_pred             --------CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          48 --------PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        48 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                              ......+++.+.+|+.+||+.||++|||++++++||||....
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         265 PSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             ccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence                    001123567899999999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.60  E-value=4.6e-15  Score=117.41  Aligned_cols=82  Identities=26%  Similarity=0.372  Sum_probs=64.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++||||+||++|||++|..||............... ......+..++.++.+|+.+||..||.+||++.+++.|
T Consensus       191 ~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         191 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN-PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC-CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            46888999999999999999999999766554333222221 11122234578899999999999999999999999999


Q ss_pred             CCC
Q psy4166          83 PFL   85 (249)
Q Consensus        83 ~~~   85 (249)
                      |||
T Consensus       270 ~~~  272 (272)
T cd06637         270 PFI  272 (272)
T ss_pred             CCC
Confidence            997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.59  E-value=5e-15  Score=123.00  Aligned_cols=91  Identities=26%  Similarity=0.405  Sum_probs=67.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cccCCCCCCCCCCHHHHHHHHHhh--hhCcccCCCHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK-NLVLVPKVPVGTSAELKELLLGLL--KRNAMDRISFEQ   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l--~~~p~~R~~~~~   78 (249)
                      +.+|+.++|||||||++|||++|++||.+.+..+....+.. ...........+++++.+||.+|+  ..++..|+++.+
T Consensus       222 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~  301 (381)
T cd05626         222 RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD  301 (381)
T ss_pred             CCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence            46789999999999999999999999988776554333322 111111223357899999999855  445556999999


Q ss_pred             HhcCCCCCCCCCCC
Q psy4166          79 LFAHPFLQPLAPHP   92 (249)
Q Consensus        79 i~~~~~~~~~~~~~   92 (249)
                      ++.||||....+..
T Consensus       302 ~l~hp~f~~~~~~~  315 (381)
T cd05626         302 IKAHPFFSEVDFSS  315 (381)
T ss_pred             HhcCcccCCCChhH
Confidence            99999999876654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0612|consensus

Probab=99.59  E-value=4.5e-15  Score=130.81  Aligned_cols=109  Identities=24%  Similarity=0.387  Sum_probs=79.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC---HH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN--LVLVPKVPVGTSAELKELLLGLLKRNAMDRIS---FE   77 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~   77 (249)
                      ..|+..|||||+||++|||+.|.+||..++--++...|-..  .-.+|. ...+|+++++||.+++ .+|..|.+   ++
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~-~~~VSeeakdLI~~ll-~~~e~RLgrngie  333 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD-ETDVSEEAKDLIEALL-CDREVRLGRNGIE  333 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc-ccccCHHHHHHHHHHh-cChhhhcccccHH
Confidence            56999999999999999999999999888776654433222  111221 2458999999999988 67889988   99


Q ss_pred             HHhcCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCc
Q psy4166          78 QLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDF  114 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (249)
                      ++..||||.+..|.++....+ +-...+++..++++|
T Consensus       334 dik~HpFF~g~~W~~iR~~~p-P~vPevssd~DTsnF  369 (1317)
T KOG0612|consen  334 DIKNHPFFEGIDWDNIRESVP-PVVPEVSSDDDTSNF  369 (1317)
T ss_pred             HHHhCccccCCChhhhhhcCC-CCCCcCCCCCccccc
Confidence            999999999999977643322 222223344445555

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=2.5e-15  Score=119.93  Aligned_cols=92  Identities=18%  Similarity=0.311  Sum_probs=71.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----C
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-EKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----S   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~   75 (249)
                      +..|+.++||||+||++|||++|+.||.+.+.......+ ..........+..++..+.+|+.+||..||.+|+     +
T Consensus       175 ~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~  254 (285)
T cd05605         175 NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEG  254 (285)
T ss_pred             CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCC
Confidence            456888999999999999999999999876654332211 2222223344566899999999999999999999     8


Q ss_pred             HHHHhcCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~   93 (249)
                      +++++.|+||....+...
T Consensus       255 ~~~l~~~~~~~~~~~~~~  272 (285)
T cd05605         255 AEEVKAHPFFRTANFKRL  272 (285)
T ss_pred             HHHHhcCcCccCCCHHHH
Confidence            999999999998766644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0659|consensus

Probab=99.59  E-value=6.4e-15  Score=111.02  Aligned_cols=88  Identities=24%  Similarity=0.299  Sum_probs=67.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HhcccCCCCCC------------------------CCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-EKNLVLVPKVP------------------------VGTSA   56 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~------------------------~~~~~   56 (249)
                      .+.|+..+|+||.|||+.||+.|.+-|.|.++-+-...+ +....+.+..+                        ...+.
T Consensus       176 sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~  255 (318)
T KOG0659|consen  176 SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASS  255 (318)
T ss_pred             chhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccH
Confidence            468999999999999999999999999998874433332 22111111111                        22467


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++.+|+.++|.+||.+|+++.++++|+||....
T Consensus       256 d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  256 DALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             HHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence            889999999999999999999999999999643

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=4.3e-15  Score=116.83  Aligned_cols=89  Identities=24%  Similarity=0.404  Sum_probs=70.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCC---HHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRIS---FEQ   78 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~   78 (249)
                      ..|+.++||||+|+++|||++|..||.+.+.......+..... ........++.++.+++.+||..||++||+   +++
T Consensus       168 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~  247 (260)
T cd05611         168 VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQE  247 (260)
T ss_pred             CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence            4578899999999999999999999988777665443333222 222334467899999999999999999995   579


Q ss_pred             HhcCCCCCCCCCC
Q psy4166          79 LFAHPFLQPLAPH   91 (249)
Q Consensus        79 i~~~~~~~~~~~~   91 (249)
                      ++.||||....|+
T Consensus       248 ~l~~~~~~~~~~~  260 (260)
T cd05611         248 IKSHPFFKSINWD  260 (260)
T ss_pred             HHcChHhhcCCCC
Confidence            9999999887663

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.59  E-value=3.5e-15  Score=121.17  Aligned_cols=88  Identities=23%  Similarity=0.451  Sum_probs=72.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+...   ....|..+++++.++|.+||..||.+|+     ++
T Consensus       169 ~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  245 (323)
T cd05595         169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA  245 (323)
T ss_pred             CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCH
Confidence            467889999999999999999999999887776654443322   2345667899999999999999999998     89


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      .++++|+||....+..
T Consensus       246 ~~~l~h~~~~~~~~~~  261 (323)
T cd05595         246 KEVMEHRFFLSINWQD  261 (323)
T ss_pred             HHHHcCCCcCCCCHHH
Confidence            9999999999766543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.59  E-value=5.8e-15  Score=118.69  Aligned_cols=87  Identities=26%  Similarity=0.416  Sum_probs=65.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CCC--------CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VPK--------VPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~--------~~~~~~   55 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......                   .+.        ....++
T Consensus       180 ~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (301)
T cd07873         180 TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD  259 (301)
T ss_pred             CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCC
Confidence            35778999999999999999999999887765433222111000                   000        012467


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +++++||.+||+.||.+|+++.+++.|+||....
T Consensus       260 ~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         260 SDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            8899999999999999999999999999998665

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.59  E-value=3.7e-15  Score=120.70  Aligned_cols=87  Identities=25%  Similarity=0.459  Sum_probs=72.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH-HHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF-EQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-~~i~   80 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..++...+..   ..+..|..++.++.+|+.+||..||.+|++. .+++
T Consensus       170 ~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         170 GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN---DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             CCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            45788999999999999999999999998887666554433   2344566789999999999999999999985 5899


Q ss_pred             cCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPH   91 (249)
Q Consensus        81 ~~~~~~~~~~~   91 (249)
                      .|+||....+.
T Consensus       247 ~h~~~~~~~~~  257 (316)
T cd05592         247 QHPFFRGIDWE  257 (316)
T ss_pred             cCcccCCCCHH
Confidence            99999977654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.59  E-value=4.4e-15  Score=119.88  Aligned_cols=87  Identities=25%  Similarity=0.385  Sum_probs=65.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CCC--------CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VPK--------VPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~--------~~~~~~   55 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......                   .+.        ....++
T Consensus       180 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (309)
T cd07872         180 SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLD  259 (309)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCC
Confidence            45788999999999999999999999887664433222111000                   000        012468


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +++.+||.+||..||.+|+++.+++.|+||....
T Consensus       260 ~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         260 TEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             HHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            8999999999999999999999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=2.3e-15  Score=123.51  Aligned_cols=92  Identities=25%  Similarity=0.366  Sum_probs=71.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-HHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-LVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-FEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~i   79 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+... .....+....+++++.+||.+||. ||.+|++ ++++
T Consensus       204 ~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~l  282 (350)
T cd05573         204 GTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEI  282 (350)
T ss_pred             CCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHH
Confidence            457889999999999999999999999988765554433321 111111122368999999999997 9999999 9999


Q ss_pred             hcCCCCCCCCCCCCC
Q psy4166          80 FAHPFLQPLAPHPLI   94 (249)
Q Consensus        80 ~~~~~~~~~~~~~~~   94 (249)
                      +.||||....+....
T Consensus       283 l~hp~~~~~~~~~~~  297 (350)
T cd05573         283 KSHPFFKGIDWENLR  297 (350)
T ss_pred             hcCCCcCCCCHHHHh
Confidence            999999987765433

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=6.9e-15  Score=119.04  Aligned_cols=91  Identities=18%  Similarity=0.300  Sum_probs=69.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC----HH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS----FE   77 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~   77 (249)
                      +..++.++|||||||++|+|++|..||.+.+.......+....... ......+..+.+++.+||..||++||+    ++
T Consensus       206 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~  284 (316)
T cd05574         206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTF-PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAA  284 (316)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccC-CCccccCHHHHHHHHHHccCCHhHCCCchhhHH
Confidence            3457789999999999999999999998877654433222211111 112236899999999999999999999    99


Q ss_pred             HHhcCCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHPL   93 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~   93 (249)
                      +++.|+||....|...
T Consensus       285 ~ll~~~~~~~~~~~~~  300 (316)
T cd05574         285 EIKQHPFFRGVNWALI  300 (316)
T ss_pred             HHHcCchhhcCChhhc
Confidence            9999999998766543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.59  E-value=4.3e-15  Score=118.26  Aligned_cols=82  Identities=26%  Similarity=0.395  Sum_probs=64.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++|+|||||++|||++|..||....+......+.... ........++.++.+||.+||..||.+||++.+++.|
T Consensus       201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             cCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC-CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            468889999999999999999999997765543332222211 1112234578999999999999999999999999999


Q ss_pred             CCC
Q psy4166          83 PFL   85 (249)
Q Consensus        83 ~~~   85 (249)
                      +||
T Consensus       280 ~~~  282 (282)
T cd06636         280 PFI  282 (282)
T ss_pred             CCC
Confidence            997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.59  E-value=2.5e-15  Score=122.33  Aligned_cols=87  Identities=23%  Similarity=0.420  Sum_probs=72.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..+....+..   .....|..+++++.+||.+||..||.+|+     ++
T Consensus       169 ~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  245 (328)
T cd05593         169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---EDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDA  245 (328)
T ss_pred             CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc---CCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCH
Confidence            45788999999999999999999999988777655443322   23345677899999999999999999997     89


Q ss_pred             HHHhcCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPH   91 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~   91 (249)
                      .++++|+||....+.
T Consensus       246 ~~il~h~~~~~~~~~  260 (328)
T cd05593         246 KEIMRHSFFTGVNWQ  260 (328)
T ss_pred             HHHhcCCCcCCCCHH
Confidence            999999999876554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.59  E-value=5.1e-15  Score=120.52  Aligned_cols=120  Identities=26%  Similarity=0.385  Sum_probs=103.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccc--ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----eEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN--LAKTQNFGKEINILKELTELHHENVVELLHCKESDQ-----HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----~~~lv  194 (249)
                      ..++.|.++.++++....++..||+|.+....  ....+.+.+|+.+++.++   |+||+++++++....     .+|++
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~~~~~lv   82 (330)
T cd07834           6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR---HENIIGLLDILRPPSPEDFNDVYIV   82 (330)
T ss_pred             eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC---CcchhhhhhhhcccCcccccceEEE
Confidence            45788889999999988889999999987643  222356788888888776   999999999988775     79999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++ ++|.+++.+.+.+++..+..++.|++.|+.|||       |+||.||++..+
T Consensus        83 ~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~  139 (330)
T cd07834          83 TELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN  139 (330)
T ss_pred             ecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            99997 589999988778999999999999999999999       999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.59  E-value=1.2e-14  Score=116.79  Aligned_cols=120  Identities=26%  Similarity=0.304  Sum_probs=98.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----------
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ----------  189 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----------  189 (249)
                      ..++.|.++.+|.+....+++.||+|.+......+  ...+.+|+.+++.++   ||||+++++++.+..          
T Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~---h~~i~~~~~~~~~~~~~~~~~~~~~   89 (302)
T cd07864          13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN---HRNIVNLKEIVTDKQDALDFKKDKG   89 (302)
T ss_pred             eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC---CCCeeeeeheecCcchhhhccccCC
Confidence            45677889999999998899999999997543222  234567888887776   999999999887654          


Q ss_pred             eEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         190 HVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       190 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .+|+||||+++ ++.+++... ..+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        90 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~  152 (302)
T cd07864          90 AFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK  152 (302)
T ss_pred             cEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            89999999975 777877754 36899999999999999999999       999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.59  E-value=9.5e-15  Score=120.10  Aligned_cols=84  Identities=23%  Similarity=0.370  Sum_probs=64.6

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-hcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYE-KNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      ++.++|||||||++|||++|+.||............. ......+..+..++.++++||.+||..||++||++.++++|+
T Consensus       250 ~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp  329 (353)
T PLN00034        250 DGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHP  329 (353)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            3458999999999999999999997543322222111 112223344567899999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          84 FLQPL   88 (249)
Q Consensus        84 ~~~~~   88 (249)
                      ||...
T Consensus       330 ~~~~~  334 (353)
T PLN00034        330 FILRA  334 (353)
T ss_pred             ccccC
Confidence            99864

>KOG0576|consensus

Probab=99.59  E-value=2.2e-16  Score=132.13  Aligned_cols=122  Identities=20%  Similarity=0.271  Sum_probs=112.2

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ++..|+|.+|.+|++.+..+++..|+|.++...-.+-...++|+-+++.++   |+|||.+++.+-.....|+.||||.|
T Consensus        20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~---h~nivay~gsylr~dklwicMEycgg   96 (829)
T KOG0576|consen   20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR---HPNIVAYFGSYLRRDKLWICMEYCGG   96 (829)
T ss_pred             eeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC---CcChHHHHhhhhhhcCcEEEEEecCC
Confidence            367899999999999999999999999998776656577889999999988   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+.-+--|.++|.++.+.+++.+.|+.|||       |+|--|||++-.
T Consensus        97 gslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~  148 (829)
T KOG0576|consen   97 GSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE  148 (829)
T ss_pred             CcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc
Confidence            999999888889999999999999999999999       999999998753

>PHA02988 hypothetical protein; Provisional

Probab=99.59  E-value=5.5e-15  Score=117.82  Aligned_cols=78  Identities=21%  Similarity=0.411  Sum_probs=64.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..++...+.... ..+..+..+++++.+++.+||+.||++||++.+++.
T Consensus       197 ~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        197 SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKN-NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC-CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            578999999999999999999999999887766554443222 223445568899999999999999999999999875

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.59  E-value=4.4e-15  Score=117.33  Aligned_cols=82  Identities=33%  Similarity=0.553  Sum_probs=64.7

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .++.++|+||+||++|+|++|+.||...................+..+..+++++.+|+.+||..+|.+||++.+++.||
T Consensus       187 ~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  266 (268)
T cd06624         187 GYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP  266 (268)
T ss_pred             cCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence            47889999999999999999999997654332222111222333455667889999999999999999999999999999


Q ss_pred             CC
Q psy4166          84 FL   85 (249)
Q Consensus        84 ~~   85 (249)
                      ||
T Consensus       267 ~~  268 (268)
T cd06624         267 FL  268 (268)
T ss_pred             CC
Confidence            97

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.59  E-value=2.1e-14  Score=116.92  Aligned_cols=118  Identities=29%  Similarity=0.327  Sum_probs=99.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+.+..+++.||+|++.+....  ..+.+.+|+.+++.+.   ||||++++++|.. ....|++|||+
T Consensus        16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~~lv~e~~   92 (328)
T cd07856          16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR---HENIISLSDIFISPLEDIYFVTELL   92 (328)
T ss_pred             EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC---CCCeeeEeeeEecCCCcEEEEeehh
Confidence            4678889999999999999999999988653221  2255678888888877   9999999999865 56799999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       +++|.++++.. .+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        93 -~~~L~~~~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~  143 (328)
T cd07856          93 -GTDLHRLLTSR-PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE  143 (328)
T ss_pred             -ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC
Confidence             67999888754 4889999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0587|consensus

Probab=99.59  E-value=1.7e-14  Score=124.19  Aligned_cols=120  Identities=23%  Similarity=0.296  Sum_probs=104.1

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-----CCeEEEEEec
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES-----DQHVYLVMEF  197 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-----~~~~~lv~e~  197 (249)
                      .++.|.++.||.+.+..+++..|+|++......+ +....|..+++..+  +|||++.++++|..     .+.+||||||
T Consensus        26 vig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d-eEiE~eynil~~~~--~hpnv~~fyg~~~k~~~~~~DqLWLVMEf  102 (953)
T KOG0587|consen   26 VIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE-EEIELEYNMLKKYS--HHPNVATFYGAFIKKDPGNGDQLWLVMEF  102 (953)
T ss_pred             EEeeccceeEEEEeeeecCceeeeEeecCCcccc-HHHHHHHHHHHhcc--CCCCcceEEEEEEEecCCCCCeEEEEeec
Confidence            5788999999999999999999999987765444 56677888888877  79999999999865     5679999999


Q ss_pred             cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVS--KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |.||+.-|+++.  .+.+.|+.+.++++.++.|+.+||       |+|-.|||+-..
T Consensus       103 C~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e  159 (953)
T KOG0587|consen  103 CGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN  159 (953)
T ss_pred             cCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc
Confidence            999999999986  346899999999999999999999       999999998543

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.58  E-value=5.9e-15  Score=118.40  Aligned_cols=86  Identities=23%  Similarity=0.377  Sum_probs=67.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..++.++|||||||++|+|++|+.||...+..................+..++..+.+++.+||..+|.+||++.+++.|
T Consensus       191 ~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            45778999999999999999999999877664332222222222223355688899999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          83 PFLQPL   88 (249)
Q Consensus        83 ~~~~~~   88 (249)
                      +||...
T Consensus       271 ~~~~~~  276 (296)
T cd06654         271 QFLKIA  276 (296)
T ss_pred             hhhhcc
Confidence            999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.58  E-value=5.8e-15  Score=122.24  Aligned_cols=87  Identities=28%  Similarity=0.333  Sum_probs=66.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-----------------------ccCCC------CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-----------------------LVLVP------KVPVG   53 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~-----------------------~~~~~------~~~~~   53 (249)
                      ..|+.++||||+||++|||++|+.||.+.+.......+...                       ....+      .....
T Consensus       180 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (372)
T cd07853         180 RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQ  259 (372)
T ss_pred             CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCC
Confidence            34788999999999999999999999887764433222110                       00011      12234


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      .++++.+||.+||+.||.+||++.+++.||||....
T Consensus       260 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         260 ATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             CCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence            678999999999999999999999999999998653

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.58  E-value=6.2e-15  Score=117.24  Aligned_cols=83  Identities=25%  Similarity=0.291  Sum_probs=62.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC---------------CCCC-----------CCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL---------------VPKV-----------PVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---------------~~~~-----------~~~~~~   56 (249)
                      ..++.++||||+||++|||++|.+||.+.+..+....+......               ....           ....+.
T Consensus       174 ~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (282)
T cd07831         174 GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASA  253 (282)
T ss_pred             CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccH
Confidence            34678999999999999999999999887664432222111100               0001           124678


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      ++.++|.+||.+||++||++++++.||||
T Consensus       254 ~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         254 EGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            99999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=8.3e-15  Score=115.32  Aligned_cols=82  Identities=29%  Similarity=0.367  Sum_probs=66.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..++.++||||+||++|||++|+.||...+......... .....+..+..++.++.+++.+||..+|.+||++.+++.|
T Consensus       182 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         182 EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA-TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh-ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            457789999999999999999999997765543322222 2223345567789999999999999999999999999999


Q ss_pred             CCC
Q psy4166          83 PFL   85 (249)
Q Consensus        83 ~~~   85 (249)
                      +||
T Consensus       261 ~~~  263 (263)
T cd06625         261 FFV  263 (263)
T ss_pred             CCC
Confidence            997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.58  E-value=2.9e-14  Score=112.73  Aligned_cols=122  Identities=22%  Similarity=0.316  Sum_probs=96.6

Q ss_pred             ccccCCCCcceeeccCCC-CCCeeEEEEeecccccc-------h---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe
Q psy4166         122 DVVSTSPPRPSSLLLSPA-PSQHVAIKRITKKNLAK-------T---QNFGKEINILKELTELHHENVVELLHCKESDQH  190 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-~~~~vavK~~~~~~~~~-------~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~  190 (249)
                      ..++.|.++.+|.+.... +++.+|+|.+.......       .   ..+.+|+.++..  .++|+||+++++++...+.
T Consensus         6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--~~~h~~i~~~~~~~~~~~~   83 (269)
T cd08528           6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKE--QLRHPNIVRYYKTFLENDR   83 (269)
T ss_pred             hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhh--cCCCCCeeeEEeeEccCCe
Confidence            457888899999988776 68899999886432211       1   223445554443  2359999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         191 VYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       191 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      .|++|||++|++|.+++..    ...+++..+..++.|++.|+.|||        |++|.||++...
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~  150 (269)
T cd08528          84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED  150 (269)
T ss_pred             EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence            9999999999999998854    235899999999999999999999        789999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.58  E-value=6.6e-15  Score=117.08  Aligned_cols=92  Identities=29%  Similarity=0.551  Sum_probs=71.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SFE   77 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~~   77 (249)
                      ..|+.++|+||+||++|||++|+.||.+.................+..+...+.++.+++.+||..+|.+|+     ++.
T Consensus       171 ~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~  250 (278)
T cd05606         171 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ  250 (278)
T ss_pred             CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHH
Confidence            468899999999999999999999998763322211112222233445666799999999999999999999     999


Q ss_pred             HHhcCCCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHPLI   94 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~~   94 (249)
                      ++++|+||....+....
T Consensus       251 ~ll~~~~~~~~~~~~~~  267 (278)
T cd05606         251 EVKEHPFFRSLDWQMVF  267 (278)
T ss_pred             HHHhCccccCCCchHhh
Confidence            99999999987766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0983|consensus

Probab=99.58  E-value=3.6e-15  Score=112.97  Aligned_cols=85  Identities=21%  Similarity=0.387  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANS-PPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+-.+||||||+.++||.||+.||.+.+ +.++...+....++..+....+|+.+.+|+..||.+|+.+||...++++
T Consensus       269 ~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  269 PKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             CccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            579999999999999999999999999854 4445444444332222222458999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      |+|+..
T Consensus       349 h~Fi~~  354 (391)
T KOG0983|consen  349 HPFIKR  354 (391)
T ss_pred             Ccceee
Confidence            999874

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.58  E-value=3.9e-15  Score=123.67  Aligned_cols=90  Identities=27%  Similarity=0.453  Sum_probs=69.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC---HH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-LVLVPKVPVGTSAELKELLLGLLKRNAMDRIS---FE   77 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~   77 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..+....+... ..........+++++.++|.+|+ .+|.+|++   ++
T Consensus       222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~  300 (382)
T cd05625         222 RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD  300 (382)
T ss_pred             CCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence            567999999999999999999999999988775544333221 11111223457899999999976 59999997   99


Q ss_pred             HHhcCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHP   92 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~   92 (249)
                      +++.||||....+..
T Consensus       301 ei~~hp~f~~~~~~~  315 (382)
T cd05625         301 EIKAHPFFKTIDFSS  315 (382)
T ss_pred             HHhcCCCcCCcChHH
Confidence            999999999876554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.58  E-value=8.5e-15  Score=117.98  Aligned_cols=91  Identities=22%  Similarity=0.393  Sum_probs=73.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC---HHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS---FEQ   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~   78 (249)
                      +..++.++|+|||||++|||++|..||.+.+..++...........+.....++.++.++|.+||..||++||+   +.+
T Consensus       190 ~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  269 (305)
T cd05609         190 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFE  269 (305)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHH
Confidence            35678899999999999999999999998877766555444333333333467899999999999999999997   789


Q ss_pred             HhcCCCCCCCCCCC
Q psy4166          79 LFAHPFLQPLAPHP   92 (249)
Q Consensus        79 i~~~~~~~~~~~~~   92 (249)
                      ++.||||....+..
T Consensus       270 ll~~~~~~~~~~~~  283 (305)
T cd05609         270 VKQHRFFLGLDWNG  283 (305)
T ss_pred             HHhCccccCCCHHH
Confidence            99999998766554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0579|consensus

Probab=99.58  E-value=4.7e-15  Score=124.06  Aligned_cols=90  Identities=24%  Similarity=0.314  Sum_probs=79.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .++|+.++||||||++|.||..+.+|-...++..+...+.+..++..-.|..++..+.||+.+||.+||..||++.++++
T Consensus       209 D~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  209 DQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             CCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            36899999999999999999999999988888887777777666666678889999999999999999999999999999


Q ss_pred             CCCCCCCCCC
Q psy4166          82 HPFLQPLAPH   91 (249)
Q Consensus        82 ~~~~~~~~~~   91 (249)
                      |||+......
T Consensus       289 Hpfv~~~~Sn  298 (1187)
T KOG0579|consen  289 HPFVQNAPSN  298 (1187)
T ss_pred             CcccccCCcc
Confidence            9999865533

>KOG0585|consensus

Probab=99.58  E-value=4.8e-15  Score=119.91  Aligned_cols=91  Identities=23%  Similarity=0.449  Sum_probs=73.9

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166           6 DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus         6 ~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      +.+.||||+||+||.|+.|+.||.++...++...+.......|..+ ...+.++++|++||++||++|++..+|..|||.
T Consensus       297 g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~p-e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  297 GFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENP-EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV  375 (576)
T ss_pred             chhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcc-cccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence            3578999999999999999999999988888776655544444433 478999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC
Q psy4166          86 QPLAPHPLIPEP   97 (249)
Q Consensus        86 ~~~~~~~~~~~~   97 (249)
                      ..-...+....+
T Consensus       376 t~~g~~~~~s~~  387 (576)
T KOG0585|consen  376 TRDGDSPQSSEP  387 (576)
T ss_pred             ccCCCCCccCCc
Confidence            865544433333

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.58  E-value=8.8e-15  Score=120.57  Aligned_cols=86  Identities=23%  Similarity=0.360  Sum_probs=62.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-Hh---------------------cccCCC-----------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-EK---------------------NLVLVP-----------   48 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-~~---------------------~~~~~~-----------   48 (249)
                      +..|+.++||||+||++|||++|+.||.+.+.......+ ..                     .....+           
T Consensus       196 ~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (359)
T cd07876         196 GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDW  275 (359)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccc
Confidence            467899999999999999999999999876543211100 00                     000000           


Q ss_pred             ------CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          49 ------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        49 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                            ......++++++||.+||..||++||++.+++.|||+..
T Consensus       276 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         276 IFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             ccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                  011124678999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0032|consensus

Probab=99.58  E-value=1e-14  Score=119.54  Aligned_cols=87  Identities=20%  Similarity=0.370  Sum_probs=74.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .+|+..+|+||+||++|.|+.|.+||.+.+.......+..... .....+..++..+++||+++|..||.+|+++.++++
T Consensus       213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            6899999999999999999999999999988776655544433 333445678999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |||+....
T Consensus       293 HpWi~~~~  300 (382)
T KOG0032|consen  293 HPWIKSIG  300 (382)
T ss_pred             CccccCCc
Confidence            99988653

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.58  E-value=1.1e-14  Score=114.21  Aligned_cols=82  Identities=26%  Similarity=0.428  Sum_probs=66.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++||||+||++|+|++|+.||.+.+.......+....  .+..+..+++.+.+++.+||..||.+||++.+++.
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         176 NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK--LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC--CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            3567889999999999999999999998776655433332222  23345668899999999999999999999999999


Q ss_pred             CCCC
Q psy4166          82 HPFL   85 (249)
Q Consensus        82 ~~~~   85 (249)
                      ||||
T Consensus       254 ~~~~  257 (257)
T cd08223         254 QPYI  257 (257)
T ss_pred             CCCC
Confidence            9997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.58  E-value=9e-15  Score=117.13  Aligned_cols=89  Identities=27%  Similarity=0.480  Sum_probs=69.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++|+||+||++|||++|+.||.+.+.......+..............+..+.+++.+||..||.+||+++++++
T Consensus       192 ~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         192 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            34678899999999999999999999988776554443333222222223357889999999999999999999999999


Q ss_pred             CCCCCCCCC
Q psy4166          82 HPFLQPLAP   90 (249)
Q Consensus        82 ~~~~~~~~~   90 (249)
                      |+||.....
T Consensus       272 ~~~~~~~~~  280 (292)
T cd06658         272 HPFLKLAGP  280 (292)
T ss_pred             ChhhhccCC
Confidence            999985543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0671|consensus

Probab=99.58  E-value=5e-15  Score=116.70  Aligned_cols=122  Identities=19%  Similarity=0.227  Sum_probs=102.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCC----CeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHE----NVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~----niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ...|.|.+|.|..+++..++..||+|+++. ...-+++..-|++++..+.. +.|    -+|.+.+||+..++.|||.|.
T Consensus        95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-V~kYreAa~iEi~vLqki~~-~DP~g~~rcv~m~~wFdyrghiCivfel  172 (415)
T KOG0671|consen   95 DLLGEGTFGKVVECWDRETKEHVALKIIKN-VDKYREAALIEIEVLQKINE-SDPNGKFRCVQMRDWFDYRGHICIVFEL  172 (415)
T ss_pred             hhhcCCcccceEEEeecCCCceehHHHHHH-HHHHhhHHHHHHHHHHHHHh-cCCCCceEEEeeehhhhccCceEEEEec
Confidence            357889999999999988899999998853 22224667788999888752 122    378899999999999999999


Q ss_pred             cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         198 CNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       198 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      + |-+++++++.++  .++...++.++.|++.++.|||       |+||||||++.+-
T Consensus       173 l-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~  229 (415)
T KOG0671|consen  173 L-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSE  229 (415)
T ss_pred             c-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccc
Confidence            8 779999999875  5889999999999999999999       9999999998653

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.58  E-value=6.3e-15  Score=116.18  Aligned_cols=82  Identities=24%  Similarity=0.345  Sum_probs=63.2

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCC---CCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKV---PVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      .++.++|+|||||++|||++|+.||...+..................   ...++..+.+++.+||..||++||++.+++
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll  262 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELL  262 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            57889999999999999999999998776644332222221111111   125688999999999999999999999999


Q ss_pred             cCCCC
Q psy4166          81 AHPFL   85 (249)
Q Consensus        81 ~~~~~   85 (249)
                      .||||
T Consensus       263 ~~p~~  267 (267)
T cd06610         263 KHKFF  267 (267)
T ss_pred             hCCCC
Confidence            99997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.58  E-value=5.5e-15  Score=120.04  Aligned_cols=87  Identities=26%  Similarity=0.423  Sum_probs=71.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..++.++|||||||++|||++|+.||.+.+.......+...   ....|..+++++.+||.+||+.||.+|+     ++
T Consensus       174 ~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  250 (323)
T cd05584         174 RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG---KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDA  250 (323)
T ss_pred             CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCH
Confidence            356788999999999999999999999988776554433332   2345667899999999999999999999     89


Q ss_pred             HHHhcCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPH   91 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~   91 (249)
                      ++++.|+||....+.
T Consensus       251 ~~l~~h~~~~~~~~~  265 (323)
T cd05584         251 AEVQSHPFFRHVNWD  265 (323)
T ss_pred             HHHhcCCCcCCCCHH
Confidence            999999999876543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.58  E-value=9.9e-15  Score=115.18  Aligned_cols=81  Identities=31%  Similarity=0.456  Sum_probs=65.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..++.++|+||+||++|+|++|+.||.+.+.........  ....+..+..++..+.++|.+||+.||.+||++.+++.|
T Consensus       187 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         187 TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG--ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh--ccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            457788999999999999999999998765533322221  233345566789999999999999999999999999999


Q ss_pred             CCC
Q psy4166          83 PFL   85 (249)
Q Consensus        83 ~~~   85 (249)
                      +||
T Consensus       265 ~~~  267 (267)
T cd06628         265 PFL  267 (267)
T ss_pred             CCC
Confidence            997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.57  E-value=1.5e-14  Score=114.98  Aligned_cols=119  Identities=25%  Similarity=0.324  Sum_probs=102.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....+++.+|+|.+......  ....+.+|+..++.+.   |+||+++++.+.+...+|+||||++
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN---HPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc---CCCcchHHHhhccCCCEEEEEeccC
Confidence            3567788899999998889999999998765332  2245677888888776   9999999999999999999999997


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + +|.+++..+ +.+++..+..++.|++.|+.|||       |++|.||++..
T Consensus        82 ~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~  133 (283)
T cd05118          82 T-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT  133 (283)
T ss_pred             C-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC
Confidence            5 899888774 57899999999999999999999       99999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.57  E-value=1.2e-14  Score=116.69  Aligned_cols=88  Identities=25%  Similarity=0.464  Sum_probs=70.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++|+|||||++|||++|+.||...+..+....+..........+..++..+.+++.+||+.+|.+||+++++++
T Consensus       191 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         191 RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            35678899999999999999999999987776554444433322223334467889999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |+||....
T Consensus       271 ~~~~~~~~  278 (297)
T cd06659         271 HPFLLQTG  278 (297)
T ss_pred             ChhhccCC
Confidence            99998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0580|consensus

Probab=99.57  E-value=5.5e-15  Score=109.75  Aligned_cols=83  Identities=25%  Similarity=0.469  Sum_probs=73.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      |.+||..+|+|++|++.||++.|.+||...+..++.+.+.+...   ..|..++.+++|+|.+||.++|.+|....+++.
T Consensus       196 ~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~---~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  196 GRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL---KFPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             CCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc---cCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            67899999999999999999999999999888777776665543   345779999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      |||+..
T Consensus       273 hpwI~a  278 (281)
T KOG0580|consen  273 HPWIVA  278 (281)
T ss_pred             hHHHHh
Confidence            999864

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.57  E-value=1.6e-14  Score=118.31  Aligned_cols=87  Identities=25%  Similarity=0.398  Sum_probs=64.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc----------------------cCCC-----CCCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL----------------------VLVP-----KVPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~----------------------~~~~-----~~~~~~~   55 (249)
                      ..|+.++|||||||++|||++|+.||.+.++...........                      ...+     .....++
T Consensus       194 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (342)
T cd07854         194 NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVN  273 (342)
T ss_pred             cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCC
Confidence            457889999999999999999999998766533222111100                      0000     0113477


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      .++.+||.+||..||.+||++.+++.|+||....
T Consensus       274 ~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         274 PEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             HHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence            8999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.57  E-value=1.7e-14  Score=117.25  Aligned_cols=88  Identities=19%  Similarity=0.356  Sum_probs=72.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +..|+.++||||+||++|||++|++||.+.+.......+...   ....|..++.++.+++.+||..||.+|++     .
T Consensus       175 ~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  251 (323)
T cd05615         175 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH---NVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGE  251 (323)
T ss_pred             CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCH
Confidence            467899999999999999999999999988776655544332   23446678999999999999999999997     5


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      ++++.|+||....+..
T Consensus       252 ~~i~~h~~f~~~~~~~  267 (323)
T cd05615         252 RDIREHAFFRRIDWDK  267 (323)
T ss_pred             HHHhcCcccCCCCHHH
Confidence            7899999999876644

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0593|consensus

Probab=99.57  E-value=3.2e-15  Score=114.66  Aligned_cols=85  Identities=29%  Similarity=0.423  Sum_probs=65.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC---------------------CCCCC-------CCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL---------------------VPKVP-------VGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---------------------~~~~~-------~~~   54 (249)
                      .+|+.+|||||+||++.||++|.+.|+|.++-+....+.+....                     .+..+       ...
T Consensus       177 tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~  256 (396)
T KOG0593|consen  177 TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKI  256 (396)
T ss_pred             CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccc
Confidence            68999999999999999999999999999885433333221100                     01111       235


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      +.-+.+|+++||+.||.+|++.++++.|+||..
T Consensus       257 s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  257 SNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             hHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            678899999999999999999999999999964

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.57  E-value=8.4e-15  Score=115.79  Aligned_cols=84  Identities=25%  Similarity=0.503  Sum_probs=65.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-HHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-FEQ   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~   78 (249)
                      +..|+.++||||+||++|||++|+.||........  ....... ......+...++.+.+||.+||+.||.+|++ +++
T Consensus       180 ~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  258 (267)
T PHA03390        180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNE  258 (267)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHH
Confidence            45788899999999999999999999986544322  1111122 2222344568999999999999999999996 699


Q ss_pred             HhcCCCCC
Q psy4166          79 LFAHPFLQ   86 (249)
Q Consensus        79 i~~~~~~~   86 (249)
                      +++|+||.
T Consensus       259 ~l~h~~~~  266 (267)
T PHA03390        259 IIKHPFLK  266 (267)
T ss_pred             HhcCCccc
Confidence            99999996

>KOG0614|consensus

Probab=99.57  E-value=9.3e-15  Score=119.26  Aligned_cols=95  Identities=18%  Similarity=0.344  Sum_probs=82.3

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----   75 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----   75 (249)
                      ++++++.++|+||||+++|||++|.+||.+.++......+.++.. ...+|..++..+.++|+++...+|..|.+     
T Consensus       592 LnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid-~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~g  670 (732)
T KOG0614|consen  592 LNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID-KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGG  670 (732)
T ss_pred             hccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh-hhhcccccchhHHHHHHHHHhcCcHhhhccccCC
Confidence            578999999999999999999999999999999887776655432 23567788999999999999999999986     


Q ss_pred             HHHHhcCCCCCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHPLIPE   96 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~~~~~   96 (249)
                      +.+|..|.||..++|..+...
T Consensus       671 I~DIkkH~Wf~gfdweglr~~  691 (732)
T KOG0614|consen  671 INDIKKHRWFEGFDWEGLRSR  691 (732)
T ss_pred             hHHHHhhhhhhcCChhhhhhc
Confidence            899999999999999876543

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.57  E-value=3.1e-14  Score=116.06  Aligned_cols=120  Identities=19%  Similarity=0.235  Sum_probs=98.1

Q ss_pred             ccccCCCCcceeeccCCCC--CCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAP--SQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~--~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~l  193 (249)
                      ..++.|.++.+|.+.....  +..||+|++......  ..+.+.+|+.+++.+.  +|+||+++++.+..    ...+|+
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~~~~~~   83 (332)
T cd07857           6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR--GHKNITCLYDMDIVFPGNFNELYL   83 (332)
T ss_pred             EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc--CCCChheeeeeeeeccccCCcEEE
Confidence            3567788999999998877  889999998743211  1245677888887764  59999999987543    246899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|||+. ++|.+++...+.+++..++.++.|++.|+.|||       |+||+||++..
T Consensus        84 ~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~  140 (332)
T cd07857          84 YEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA  140 (332)
T ss_pred             EEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC
Confidence            999995 699999988888999999999999999999999       99999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.57  E-value=8.4e-15  Score=122.06  Aligned_cols=91  Identities=19%  Similarity=0.262  Sum_probs=65.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhccc-------------------------CCCCCC-
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP----PQLKQYYEKNLV-------------------------LVPKVP-   51 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~----~~~~~~~~~~~~-------------------------~~~~~~-   51 (249)
                      +..|+.++||||+||++|||++|+.||.+...    ..+...+.....                         .....+ 
T Consensus       261 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (392)
T PHA03207        261 LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPP  340 (392)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccc
Confidence            45788999999999999999999999976542    122221111000                         000011 


Q ss_pred             ----CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          52 ----VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        52 ----~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                          ..++.++.+||++||..||.+||++.+++.||||....+..
T Consensus       341 ~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~  385 (392)
T PHA03207        341 VIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINL  385 (392)
T ss_pred             hhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhh
Confidence                23567889999999999999999999999999998765543

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.57  E-value=2.7e-14  Score=116.70  Aligned_cols=120  Identities=23%  Similarity=0.315  Sum_probs=98.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccc--ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKN--LAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ..++.|.++.+|.+....++..+|+|++....  ......+.+|+.+++.+.  +|+||+++++++..  ...+|+||||
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~ni~~~~~~~~~~~~~~~~lv~e~   90 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG--DHPNIVKLLNVIKAENDKDIYLVFEY   90 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc--CCCCccceeeeeccCCCceEEEEecc
Confidence            45678888999999888889999999886432  122244667888888772  39999999998864  3468999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++ ++|.+++.++ .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        91 ~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~  143 (337)
T cd07852          91 ME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD  143 (337)
T ss_pred             cc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            97 5999999876 6889999999999999999999       999999999654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.57  E-value=9e-15  Score=121.64  Aligned_cols=88  Identities=22%  Similarity=0.313  Sum_probs=61.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhcccC-------------------------CC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP--------PQLKQYYEKNLVL-------------------------VP   48 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~-------------------------~~   48 (249)
                      +..|+.++||||+||++|||++|+.||.+...        ..+..++......                         .+
T Consensus       257 ~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (391)
T PHA03212        257 RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKP  336 (391)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCC
Confidence            45789999999999999999999988754321        1111111111000                         00


Q ss_pred             -CCC-----CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          49 -KVP-----VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        49 -~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                       ..+     ..++.++.+||.+||.+||.+||++.+++.|+||....
T Consensus       337 ~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        337 GSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             CCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence             000     12466889999999999999999999999999998753

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.57  E-value=4.9e-15  Score=118.96  Aligned_cols=89  Identities=25%  Similarity=0.416  Sum_probs=68.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++|+||+||++|+|++|..||.+.+..................+..++..+.+|+.+||..||++||++.+++.
T Consensus       189 ~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            35678899999999999999999999987655332221222222222345567889999999999999999999999999


Q ss_pred             CCCCCCCCC
Q psy4166          82 HPFLQPLAP   90 (249)
Q Consensus        82 ~~~~~~~~~   90 (249)
                      |+||.....
T Consensus       269 ~~~~~~~~~  277 (297)
T cd06656         269 HPFLKLAKP  277 (297)
T ss_pred             Cchhccccc
Confidence            999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.57  E-value=9e-15  Score=116.67  Aligned_cols=87  Identities=20%  Similarity=0.371  Sum_probs=68.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK-NLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|+||+||++|+|++|+.||.............. .....+..+..++.++.+||.+||..+|++||++.+++.
T Consensus       182 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         182 PTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            3568899999999999999999999976655443332222 222334556668999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |+||....
T Consensus       262 ~~~~~~~~  269 (286)
T cd06622         262 HPWLVKYK  269 (286)
T ss_pred             Chhhhhcc
Confidence            99997543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.57  E-value=5.3e-15  Score=120.46  Aligned_cols=88  Identities=22%  Similarity=0.435  Sum_probs=68.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---------HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCccc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP---------PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMD   72 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~   72 (249)
                      +..|+.++||||+||++|||++|+.||.....         ......+.   ......|..++.++.++|.+||..||.+
T Consensus       170 ~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~li~~~L~~dP~~  246 (329)
T cd05588         170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL---EKQIRIPRSLSVKASSVLKGFLNKDPKE  246 (329)
T ss_pred             CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH---cCCCCCCCCCCHHHHHHHHHHhccCHHH
Confidence            46788999999999999999999999963211         11222222   2233456678999999999999999999


Q ss_pred             CCC------HHHHhcCCCCCCCCCCC
Q psy4166          73 RIS------FEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        73 R~~------~~~i~~~~~~~~~~~~~   92 (249)
                      |++      +++++.||||....+..
T Consensus       247 R~~~~~~~~~~~i~~hp~~~~~~~~~  272 (329)
T cd05588         247 RLGCHPQTGFRDIKSHPFFRNIDWDL  272 (329)
T ss_pred             cCCCCCCCCHHHHhcCCCCCCCCHHH
Confidence            987      78999999998776653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.57  E-value=6.6e-15  Score=117.49  Aligned_cols=90  Identities=16%  Similarity=0.339  Sum_probs=67.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK-NLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----   75 (249)
                      +..|+.++||||+||++|+|++|+.||.+............ ........+..+++++.+|+.+||+.||.+|++     
T Consensus       175 ~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~  254 (285)
T cd05630         175 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGG  254 (285)
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCc
Confidence            45688999999999999999999999987543211111111 011122345568899999999999999999999     


Q ss_pred             HHHHhcCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPH   91 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~   91 (249)
                      ++++++|+||....+.
T Consensus       255 ~~~~~~h~~~~~~~~~  270 (285)
T cd05630         255 AREVKEHPLFKQINFK  270 (285)
T ss_pred             hHHHHcChhhhccCHH
Confidence            8999999999876554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.57  E-value=4.3e-15  Score=120.99  Aligned_cols=87  Identities=22%  Similarity=0.452  Sum_probs=67.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCC---------HHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCccc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANS---------PPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMD   72 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~   72 (249)
                      +..|+.++|||||||++|||++|+.||....         ...+...+   .......|..++.++.++|.+||..||.+
T Consensus       170 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i---~~~~~~~p~~~~~~~~~ll~~~L~~dP~~  246 (329)
T cd05618         170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI---LEKQIRIPRSLSVKAASVLKSFLNKDPKE  246 (329)
T ss_pred             CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH---hcCCCCCCCCCCHHHHHHHHHHhcCCHHH
Confidence            4678899999999999999999999995211         11122222   22233456778999999999999999999


Q ss_pred             CCC------HHHHhcCCCCCCCCCC
Q psy4166          73 RIS------FEQLFAHPFLQPLAPH   91 (249)
Q Consensus        73 R~~------~~~i~~~~~~~~~~~~   91 (249)
                      |++      +.++++||||....|.
T Consensus       247 R~~~~~~~~~~~i~~hp~f~~~~~~  271 (329)
T cd05618         247 RLGCHPQTGFADIQGHPFFRNVDWD  271 (329)
T ss_pred             cCCCCCCCCHHHHhcCCCCCCCCHH
Confidence            998      5899999999887654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.57  E-value=6.4e-15  Score=119.29  Aligned_cols=83  Identities=25%  Similarity=0.403  Sum_probs=58.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----------HHHHHHHhcccC----------CC--------------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP----------QLKQYYEKNLVL----------VP--------------   48 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~----------~~~~~~~~~~~~----------~~--------------   48 (249)
                      ..|+.++||||+||++|||++|++||.+....          .+.........+          .+              
T Consensus       191 ~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (317)
T cd07868         191 RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY  270 (317)
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcccc
Confidence            45889999999999999999999999754321          111111100000          00              


Q ss_pred             ----------CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          49 ----------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        49 ----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                                ......+.++.+||.+||++||.+|+|++++++||||
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         271 TNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                      0001235678999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.57  E-value=7e-15  Score=116.86  Aligned_cols=92  Identities=16%  Similarity=0.273  Sum_probs=66.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCH---
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISF---   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~---   76 (249)
                      +..|+.++||||+||++|||++|+.||.+...... ............ .....++.++++++.+||..||.+|+++   
T Consensus       168 ~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~  247 (277)
T cd05607         168 EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREK  247 (277)
T ss_pred             cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccc
Confidence            45688999999999999999999999976433211 111111111111 1123578999999999999999999998   


Q ss_pred             -HHHhcCCCCCCCCCCCC
Q psy4166          77 -EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 -~~i~~~~~~~~~~~~~~   93 (249)
                       ++++.|+||....+...
T Consensus       248 ~~~~~~h~~f~~~~~~~~  265 (277)
T cd05607         248 NDDPRKHEFFKTINFPRL  265 (277)
T ss_pred             hhhhhcChhhcCCCHHHH
Confidence             77889999998765443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.57  E-value=7.9e-15  Score=117.09  Aligned_cols=85  Identities=20%  Similarity=0.351  Sum_probs=64.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCC----CCCCCCCHHHHHHHHHhhhhCcccCCCHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-LVLVP----KVPVGTSAELKELLLGLLKRNAMDRISFE   77 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~   77 (249)
                      ..|+.++||||+||++|||++|+.||.....  ....+... ....+    ..+..++.++.+|+.+||..||++||+++
T Consensus       185 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  262 (288)
T cd06616         185 DGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYK  262 (288)
T ss_pred             cCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence            3688999999999999999999999976542  11111111 11111    12234789999999999999999999999


Q ss_pred             HHhcCCCCCCCC
Q psy4166          78 QLFAHPFLQPLA   89 (249)
Q Consensus        78 ~i~~~~~~~~~~   89 (249)
                      +++.|+||....
T Consensus       263 ~i~~~~~~~~~~  274 (288)
T cd06616         263 ELLEHPFIKDYE  274 (288)
T ss_pred             HHhcChhhhchh
Confidence            999999998643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=6.3e-15  Score=120.21  Aligned_cols=91  Identities=22%  Similarity=0.330  Sum_probs=71.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc--CCCCCC---CCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV--LVPKVP---VGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++||||+||++|||++|..||.+.+..+....+.....  ..+...   ..++.++.+||.+||..+|.+|+++
T Consensus       172 ~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~  251 (333)
T cd05600         172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSL  251 (333)
T ss_pred             CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCH
Confidence            45789999999999999999999999998877665443332111  111111   2468999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      .+++.|+||....+..
T Consensus       252 ~~ll~h~~~~~~~~~~  267 (333)
T cd05600         252 EDIKNHPFFKEVDWNE  267 (333)
T ss_pred             HHHHhCcccCCCCHHH
Confidence            9999999999775543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.57  E-value=1.6e-14  Score=118.04  Aligned_cols=119  Identities=25%  Similarity=0.333  Sum_probs=97.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv~  195 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+...... ....+.+|+.+++.++   |+||+++++++...     ...|++|
T Consensus        11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~   87 (336)
T cd07849          11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK---HENIIGILDIIRPPSFESFNDVYIVQ   87 (336)
T ss_pred             EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC---CCCcCchhheeecccccccceEEEEe
Confidence            4678888999999998889999999998643211 1244667888888776   99999999876543     3589999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++ ++|.+++..+ .+++..++.++.|++.|+.|||       |+||+||++..+
T Consensus        88 e~~~-~~l~~~~~~~-~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~  142 (336)
T cd07849          88 ELME-TDLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN  142 (336)
T ss_pred             hhcc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC
Confidence            9996 5998888654 5999999999999999999999       999999998653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.57  E-value=1.5e-14  Score=115.18  Aligned_cols=120  Identities=22%  Similarity=0.298  Sum_probs=98.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.+|.+....+++.||+|++...... +.....+|+..++.+.  +|+||+++++++.+....|+||||+ +
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~--~h~~i~~~~~~~~~~~~~~lv~e~~-~   81 (283)
T cd07830           5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN--EHPNIVKLKEVFRENDELYFVFEYM-E   81 (283)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc--CCCCchhHHHHhhcCCcEEEEEecC-C
Confidence            3567788999999998888999999998654321 1123345666555443  3999999999999999999999999 7


Q ss_pred             CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++....  .+++..+..++.|++.++.|||       |++|.||++..
T Consensus        82 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~  134 (283)
T cd07830          82 GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG  134 (283)
T ss_pred             CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC
Confidence            89999998764  6899999999999999999999       99999999974

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.57  E-value=1.6e-14  Score=114.79  Aligned_cols=119  Identities=29%  Similarity=0.427  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+....+++.+|+|.+.......  .+.+..|+.+++.++   |+||+++++++.+...+|+||||++
T Consensus         5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK---HPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC---CCCHHHHHhhhhcCCceEEEecCcC
Confidence            34677888999999998899999999998653221  245667888888776   9999999999999999999999997


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|.+++.+. ..+++..+..++.+++.|+.|||       |++|+||++..
T Consensus        82 -~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~  133 (282)
T cd07829          82 -MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR  133 (282)
T ss_pred             -cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC
Confidence             5999999886 56999999999999999999999       99999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.56  E-value=8.4e-15  Score=116.81  Aligned_cols=83  Identities=22%  Similarity=0.321  Sum_probs=63.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++||||+||++|||++|+.||......................+..++.++.+++.+||..||++||++.++++|
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            45888999999999999999999999876553322222222111222344567899999999999999999999999999


Q ss_pred             CCC
Q psy4166          83 PFL   85 (249)
Q Consensus        83 ~~~   85 (249)
                      +||
T Consensus       284 ~~~  286 (286)
T cd06638         284 VFI  286 (286)
T ss_pred             ccC
Confidence            997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.56  E-value=2.2e-15  Score=122.54  Aligned_cols=87  Identities=23%  Similarity=0.459  Sum_probs=72.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+...   ....|..+++++.+||.+||+.||.+|+     ++
T Consensus       170 ~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~  246 (325)
T cd05594         170 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDA  246 (325)
T ss_pred             cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCH
Confidence            467899999999999999999999999888776655444322   2344667899999999999999999997     89


Q ss_pred             HHHhcCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPH   91 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~   91 (249)
                      .++++|+||....+.
T Consensus       247 ~~il~h~~~~~~~~~  261 (325)
T cd05594         247 KEIMQHKFFAGIVWQ  261 (325)
T ss_pred             HHHhcCCCcCCCCHH
Confidence            999999999976554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0671|consensus

Probab=99.56  E-value=5.2e-16  Score=122.14  Aligned_cols=89  Identities=24%  Similarity=0.442  Sum_probs=67.2

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC------------------CCCC---------
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK------------------VPVG---------   53 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------~~~~---------   53 (249)
                      ||-+++.+|||||+||||+|+.+|...|.+.++.+-..++.+...+.|.                  ++..         
T Consensus       282 LgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v  361 (415)
T KOG0671|consen  282 LGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYV  361 (415)
T ss_pred             eccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhh
Confidence            5779999999999999999999999999988765533444333322221                  0000         


Q ss_pred             ----------------CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          54 ----------------TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        54 ----------------~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                                      -..++.||+++||.+||.+|+|+.|++.||||....
T Consensus       362 ~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  362 FEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             hcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence                            023577999999999999999999999999998643

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.56  E-value=1.5e-14  Score=116.78  Aligned_cols=87  Identities=22%  Similarity=0.217  Sum_probs=66.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-------------------CCCC--------CCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-------------------PKVP--------VGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~--------~~~~   55 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......+                   +..+        ...+
T Consensus       184 ~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (309)
T cd07845         184 TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLS  263 (309)
T ss_pred             CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccC
Confidence            457889999999999999999999999887765443332211100                   0000        1257


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +++.+||.+||..||++||++++++.|+||....
T Consensus       264 ~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         264 EAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence            8899999999999999999999999999998543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.56  E-value=1.3e-14  Score=114.33  Aligned_cols=89  Identities=24%  Similarity=0.393  Sum_probs=70.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANS--PPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS----   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----   75 (249)
                      +..++.++|+||+||++|+|++|..||....  .......+.. ....+..|...+.++.++|.+||..||.+|++    
T Consensus       166 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~  244 (262)
T cd05572         166 NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK-GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKG  244 (262)
T ss_pred             CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCccc
Confidence            3567889999999999999999999998776  3333333221 12234455566899999999999999999999    


Q ss_pred             -HHHHhcCCCCCCCCCC
Q psy4166          76 -FEQLFAHPFLQPLAPH   91 (249)
Q Consensus        76 -~~~i~~~~~~~~~~~~   91 (249)
                       +.++++||||.+..|+
T Consensus       245 ~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         245 GIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             CHHHHhcChhhhCCCCC
Confidence             9999999999977654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0193|consensus

Probab=99.56  E-value=9.1e-15  Score=121.42  Aligned_cols=115  Identities=17%  Similarity=0.200  Sum_probs=100.3

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      .+|+|.||.||++..   --.||||.+......  +.+.|..||..++.-.   |.||+=|.|++..+.. .||+.+|+|
T Consensus       399 rIGsGsFGtV~Rg~w---hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR---H~NIlLFMG~~~~p~~-AIiTqwCeG  471 (678)
T KOG0193|consen  399 RIGSGSFGTVYRGRW---HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR---HENILLFMGACMNPPL-AIITQWCEG  471 (678)
T ss_pred             eeccccccceeeccc---ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcc---hhhheeeehhhcCCce-eeeehhccC
Confidence            579999999998854   235899999865433  3478999999999988   9999999999998877 999999999


Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      .+|..+|+-. .+|...+.+.+++|+++|+.|||       |+|..||+|=+
T Consensus       472 sSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~  523 (678)
T KOG0193|consen  472 SSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE  523 (678)
T ss_pred             chhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc
Confidence            9999999864 36999999999999999999999       99999999865

>KOG1095|consensus

Probab=99.56  E-value=1.4e-14  Score=128.68  Aligned_cols=119  Identities=19%  Similarity=0.258  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCC-C----CCeeEEEEeeccc-ccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-P----SQHVAIKRITKKN-LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.||.||.+.-.. .    ...||+|.+.+.. .++...|.+|..+|+.++   |||||+++|.+-+.+..+|++
T Consensus       698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~---HpNiv~liGv~l~~~~~~i~l  774 (1025)
T KOG1095|consen  698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFD---HPNIVSLIGVCLDSGPPLILL  774 (1025)
T ss_pred             eeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCC---CcceeeEEEeecCCCCcEEEe
Confidence            457899999999776432 2    3459999998753 333467899999999887   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         196 EFCNGGDLADYLVSKG-------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |||+||+|..+|++.+       .++..++..++.+|+.|+.||+       |+---|.||.
T Consensus       775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~  836 (1025)
T KOG1095|consen  775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD  836 (1025)
T ss_pred             hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec
Confidence            9999999999999873       3788999999999999999998       8878888875

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=6.8e-15  Score=121.46  Aligned_cols=90  Identities=24%  Similarity=0.376  Sum_probs=70.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCC---HH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRIS---FE   77 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~   77 (249)
                      +.+|+.++|||||||++|||++|.+||.+.+..+....+..... ........+++++.+||.+|+. +|.+|++   +.
T Consensus       213 ~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~  291 (364)
T cd05599         213 QTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN  291 (364)
T ss_pred             CCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence            45789999999999999999999999998877655443322211 1111123478999999999996 9999998   99


Q ss_pred             HHhcCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHP   92 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~   92 (249)
                      +++.|+||....+..
T Consensus       292 ~ll~h~~~~~~~~~~  306 (364)
T cd05599         292 EIKSHPFFKGVDWEH  306 (364)
T ss_pred             HHhcCCCcCCCCHHH
Confidence            999999999876654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.56  E-value=4.8e-15  Score=120.76  Aligned_cols=91  Identities=21%  Similarity=0.388  Sum_probs=70.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+..... ...+....++.++.+|+.+||. +|.+|+++++++
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~  261 (330)
T cd05601         183 KGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLC  261 (330)
T ss_pred             cCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHh
Confidence            35688899999999999999999999988776554433322211 1111123578999999999997 999999999999


Q ss_pred             cCCCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPHPL   93 (249)
Q Consensus        81 ~~~~~~~~~~~~~   93 (249)
                      .||||....+...
T Consensus       262 ~h~~~~~~~~~~~  274 (330)
T cd05601         262 CHPFFSKIDWNNI  274 (330)
T ss_pred             CCCCcCCCCHHHH
Confidence            9999998766544

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.56  E-value=2.1e-14  Score=118.55  Aligned_cols=92  Identities=21%  Similarity=0.322  Sum_probs=68.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-cCCCCCCCCCCHHHHHHHHHhhhhCcc---cCCCHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL-VLVPKVPVGTSAELKELLLGLLKRNAM---DRISFE   77 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~---~R~~~~   77 (249)
                      +.+|+.++|||||||++|||++|+.||.+.+..+....+.... ....+....+++++++||.+++. +|.   .||+++
T Consensus       210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~  288 (363)
T cd05628         210 QTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVE  288 (363)
T ss_pred             CCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHH
Confidence            5678999999999999999999999999887766554443211 11111112478999999998764 444   468999


Q ss_pred             HHhcCCCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHPLI   94 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~~   94 (249)
                      ++++||||....+....
T Consensus       289 ei~~hp~f~~~~~~~~~  305 (363)
T cd05628         289 EIKTNPFFEGVDWEHIR  305 (363)
T ss_pred             HHhCCCCCCCCCHHHHH
Confidence            99999999988776543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.56  E-value=1.5e-14  Score=118.45  Aligned_cols=87  Identities=28%  Similarity=0.388  Sum_probs=64.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc--------------------CCCCC--------CCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV--------------------LVPKV--------PVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~--------------------~~~~~--------~~~~   54 (249)
                      ..|+.++||||+||++|+|++|+.||.+.+.......+.....                    ..+..        ....
T Consensus       191 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (343)
T cd07878         191 MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGA  270 (343)
T ss_pred             ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCC
Confidence            4688899999999999999999999987655332221111000                    00000        1235


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++.+.+|+.+||..||.+||++.+++.||||....
T Consensus       271 ~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         271 NPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence            67789999999999999999999999999998654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.56  E-value=1.8e-14  Score=118.52  Aligned_cols=87  Identities=21%  Similarity=0.268  Sum_probs=63.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHhcc---------------------cC-------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ-YYEKNL---------------------VL-------------   46 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~-~~~~~~---------------------~~-------------   46 (249)
                      +..|+.++|||||||++|||++|+.||.+.+...... .+....                     ..             
T Consensus       192 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (355)
T cd07874         192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS  271 (355)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccc
Confidence            4678999999999999999999999998776433211 111000                     00             


Q ss_pred             ----CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          47 ----VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        47 ----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                          ....+...+.++++||.+||..||.+|||+.++++||||...
T Consensus       272 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         272 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             ccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence                000112235678999999999999999999999999999744

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.56  E-value=1.2e-14  Score=114.82  Aligned_cols=83  Identities=30%  Similarity=0.416  Sum_probs=64.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++|+||+||++|||++|+.||............. .....+..+..+++.+.+++ +||..+|++||++++++.
T Consensus       183 ~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         183 GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA-TQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh-cCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            3557889999999999999999999998765443332221 22233455667889999999 577789999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      ||||.
T Consensus       261 hp~~~  265 (266)
T cd06651         261 HPFAQ  265 (266)
T ss_pred             Ccccc
Confidence            99986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.56  E-value=1.6e-14  Score=113.34  Aligned_cols=82  Identities=27%  Similarity=0.425  Sum_probs=67.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++|+|||||++|+|++|+.||......+....+...  ..+..+..++.++.++|.+||+.+|.+||++.+++.
T Consensus       175 ~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         175 NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG--SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC--CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            356778899999999999999999999877665544333222  233446678999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          82 HPFL   85 (249)
Q Consensus        82 ~~~~   85 (249)
                      |+||
T Consensus       253 ~~~~  256 (256)
T cd08218         253 KNFI  256 (256)
T ss_pred             CcCC
Confidence            9997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.56  E-value=1.5e-14  Score=115.16  Aligned_cols=82  Identities=27%  Similarity=0.390  Sum_probs=61.1

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHhcccC-----------------CC--------CCCCCCCHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLK-QYYEKNLVL-----------------VP--------KVPVGTSAE   57 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~-----------------~~--------~~~~~~~~~   57 (249)
                      .++.++|||||||++|||++|+.||.+.+..... +........                 .+        .....++++
T Consensus       177 ~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd07860         177 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDED  256 (284)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHH
Confidence            3577899999999999999999999877654322 111111000                 00        011246788


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      ++++|.+||+.||.+||++++++.||||
T Consensus       257 ~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         257 GRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG3653|consensus

Probab=99.56  E-value=9.7e-15  Score=118.00  Aligned_cols=118  Identities=19%  Similarity=0.275  Sum_probs=102.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv~e~  197 (249)
                      +..+.|++|.|+.+..  .++.||||+.+..   +++.+..|-+|.+.. .+.|+||+++++.-+...    .++||+||
T Consensus       216 eli~~Grfg~V~KaqL--~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp-~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f  289 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ---EKQSFQNEKNIYSLP-GMKHENILQFIGAEKRGTADRMEYWLVTEF  289 (534)
T ss_pred             HHhhcCccceeehhhc--cCceeEEEecCHH---HHHHHHhHHHHHhcc-CccchhHHHhhchhccCCccccceeEEeee
Confidence            5678999999998864  5699999999643   347788899988765 467999999998866544    79999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh----------------cCCccceeeeecc
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH----------------DFTPWSFVILYTI  246 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh----------------d~kp~nili~~~~  246 (249)
                      .+.|+|.++|+.+. +++.....++.-++.||+|||                |+|..|||+++.-
T Consensus       290 h~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl  353 (534)
T KOG3653|consen  290 HPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL  353 (534)
T ss_pred             ccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence            99999999999875 999999999999999999999                9999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	249
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-08
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-08
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-08
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		6e-08
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		6e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-08
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		9e-08
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		2e-07
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-07
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-07
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-07
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-06
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-06
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		6e-06
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		7e-06
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		7e-06
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		7e-06
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		7e-06
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-06
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		8e-06
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		8e-06
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		8e-06
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		8e-06
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		8e-06
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		8e-06
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		8e-06
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		9e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-06
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-05
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-05
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-05
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		4e-05
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-05
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-05
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-05
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		6e-05
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		6e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-05
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-05
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		7e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		4e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		5e-04
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-04
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		6e-04
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		6e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		6e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		6e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-04
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		8e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		8e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		8e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		8e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		8e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		8e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		8e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		8e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-04

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VAIK I K  L  T  Q   +E+ I+K L   +H N+V+L    E+++ +YL+ME+ +
Sbjct: 38  REVAIKIIDKTQLNPTSLQKLFREVRIMKIL---NHPNIVKLFEVIETEKTLYLIMEYAS 94
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 95  GGEVFDYLVAHGRMKEKEAR 114

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VAIK I K  L  T  Q   +E+ I+K L   +H N+V+L    E+++ +YL+ME+ +
Sbjct: 41  REVAIKIIDKTQLNPTSLQKLFREVRIMKIL---NHPNIVKLFEVIETEKTLYLIMEYAS 97
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 98  GGEVFDYLVAHGRMKEKEAR 117

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K I K  L  +  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 40  KEVAVKIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYAS 96
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 97  GGEVFDYLVAHGRMKEKEAR 116

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K I K  L  +  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 40  KEVAVKIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYAS 96
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 97  GGEVFDYLVAHGRMKEKEAR 116

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K I K  L  T  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 41  REVAVKIIDKTQLNPTSLQKLFREVRIMKIL---NHPNIVKLFEVIETEKTLYLVMEYAS 97
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 98  GGEVFDYLVAHGRMKEKEAR 117

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K I K  L  +  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 40  KEVAVKIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYAS 96
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 97  GGEVFDYLVAHGRMKEKEAR 116

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K I K  L  +  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 33  KEVAVKIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYAS 89
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 90  GGEVFDYLVAHGWMKEKEAR 109

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 111 TDDFVVIPNSADVVSTXXXXXXXXXXXXXXXQHVAIKRITKKNLAKTQNFGKEINILKEL 170
            +D   I +  DV+ T               + VAIK I KK L      GKE ++  E+
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-----GKEGSMENEI 67
Query: 171 TELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKLHQ 226
             LH   H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E D  R+  ++  
Sbjct: 68  AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 227 MLQLYFHDF 235
            ++ Y HD 
Sbjct: 128 AVK-YLHDL 135

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA++ I K  L  +  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 40  KEVAVRIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYAS 96
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 97  GGEVFDYLVAHGRMKEKEAR 116

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA++ I K  L  +  Q   +E+ I+K L   +H N+V+L    E+++ +YLVME+ +
Sbjct: 40  KEVAVRIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYAS 96
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G + E   R
Sbjct: 97  GGEVFDYLVAHGRMKEKEAR 116

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 111 TDDFVVIPNSADVVSTXXXXXXXXXXXXXXXQHVAIKRITKKNLAKTQNFGKEINILKEL 170
            +D   I +  DV+ T               + VAIK I K+ L      GKE ++  E+
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE-----GKEGSMENEI 67
Query: 171 TELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKLHQ 226
             LH   H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E D  R+  ++  
Sbjct: 68  AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 227 MLQLYFHDF 235
            ++ Y HD 
Sbjct: 128 AVK-YLHDL 135

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 111 TDDFVVIPNSADVVSTXXXXXXXXXXXXXXXQHVAIKRITKKNLAKTQNFGKEINILKEL 170
            +D   I +  DV+ T               + VAIK I K+ L      GKE ++  E+
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE-----GKEGSMENEI 67
Query: 171 TELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKLHQ 226
             LH   H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E D  R+  ++  
Sbjct: 68  AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 227 MLQLYFHDF 235
            ++ Y HD 
Sbjct: 128 AVK-YLHDL 135

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 111 TDDFVVIPNSADVVSTXXXXXXXXXXXXXXXQHVAIKRITKKNLAKTQNFGKEINILKEL 170
            +D   I +  DV+ T               + VAIK I K+ L      GKE ++  E+
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE-----GKEGSMENEI 67
Query: 171 TELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKLHQ 226
             LH   H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E D  R+  ++  
Sbjct: 68  AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 227 MLQLYFHDF 235
            ++ Y HD 
Sbjct: 128 AVK-YLHDL 135

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 145 AIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A+K I KK L      GKE +I  E   L ++ HEN+V L    ES  H+YLVM+  +GG
Sbjct: 51  AVKCIPKKALK-----GKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGG 105
Query: 202 DLADYLVSKGTLSEDTIRIFLK--------LHQM 227
           +L D +V KG  +E      ++        LH+M
Sbjct: 106 ELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 145 AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           A K+I K  +     F +EI I+K L    H N++ L    E +  +YLVME C GG+L 
Sbjct: 38  AAKKIPKYFVEDVDRFKQEIEIMKSL---DHPNIIRLYETFEDNTDIYLVMELCTGGELF 94
Query: 205 DYLVSKGTLSE-DTIRIF------LKLHQMLQLYFHDFTPWSFVIL 243
           + +V K    E D  RI       +     L +   D  P +F+ L
Sbjct: 95  ERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 140

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 145 AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           A K+I K  +     F +EI I+K L    H N++ L    E +  +YLVME C GG+L 
Sbjct: 55  AAKKIPKYFVEDVDRFKQEIEIMKSL---DHPNIIRLYETFEDNTDIYLVMELCTGGELF 111
Query: 205 DYLVSKGTLSE-DTIRI 220
           + +V K    E D  RI
Sbjct: 112 ERVVHKRVFRESDAARI 128

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K I K  L  +  Q   +E+ I K L   +H N+V+L    E+++ +YLV E+ +
Sbjct: 40  KEVAVKIIDKTQLNSSSLQKLFREVRIXKVL---NHPNIVKLFEVIETEKTLYLVXEYAS 96
Query: 200 GGDLADYLVSKGTLSEDTIR 219
           GG++ DYLV+ G   E   R
Sbjct: 97  GGEVFDYLVAHGRXKEKEAR 116

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 142 QHVAIKRITKKNLAKT------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
           +  A K I K+ L+ +      +   +E+NIL+E+    H N++ L    E+   V L++
Sbjct: 38  KEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI---RHPNIITLHDIFENKTDVVLIL 94
Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLK 223
           E  +GG+L D+L  K +L+ED    FLK
Sbjct: 95  ELVSGGELFDFLAEKESLTEDEATQFLK 122

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 145 AIKRITKKNLAKT------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           A K I K+ L+ +      +   +E+NIL+E+    H N++ L    E+   V L++E  
Sbjct: 34  AAKFIKKRRLSSSRRGVSREEIEREVNILREI---RHPNIITLHDIFENKTDVVLILELV 90
Query: 199 NGGDLADYLVSKGTLSEDTIRIFLK 223
           +GG+L D+L  K +L+ED    FLK
Sbjct: 91  SGGELFDFLAEKESLTEDEATQFLK 115

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 45  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 101
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 102 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 147

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 45  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 101
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 102 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 147

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VAIK I KK + K     +  N +K   +L H +++EL +  E   +VYLV+E C+ G++
Sbjct: 39  VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM 98
Query: 204 ADYLVSK-GTLSEDTIRIFLKLHQML--QLYFH 233
             YL ++    SE+  R F  +HQ++   LY H
Sbjct: 99  NRYLKNRVKPFSENEARHF--MHQIITGMLYLH 129

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L++E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILILELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 142 QHVAIKRITKKNLAKT------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
           +  A K I K+ L  +      +   +E+NIL+E+    H N++ L    E+   V L++
Sbjct: 52  KEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI---RHPNIITLHDIFENKTDVVLIL 108
Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLK 223
           E  +GG+L D+L  K +L+ED    FLK
Sbjct: 109 ELVSGGELFDFLAEKESLTEDEATQFLK 136

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 145 AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           A+K I K    +  +   EI +LK++    HEN+V L    ES  H YLVM+  +GG+L 
Sbjct: 38  ALKCIKKSPAFRDSSLENEIAVLKKIK---HENIVTLEDIYESTTHYYLVMQLVSGGELF 94
Query: 205 DYLVSKGTLSE 215
           D ++ +G  +E
Sbjct: 95  DRILERGVYTE 105

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 147 KRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           KR TK  +     ++  +E++ILKE+    H NV+ L    E+   V L+ E   GG+L 
Sbjct: 46  KRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILIGELVAGGELF 102
Query: 205 DYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTPWSFVIL 243
           D+L  K +L+E+    FLK        LH  LQ+   D  P + ++L
Sbjct: 103 DFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLL 148

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 148 RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           R +++ +++ +   +E++IL+++  LHH NV+ L    E+   V L++E  +GG+L D+L
Sbjct: 51  RASRRGVSR-EEIEREVSILRQV--LHH-NVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 208 VSKGTLSEDTIRIFLK 223
             K +LSE+    F+K
Sbjct: 107 AQKESLSEEEATSFIK 122

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 148 RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           R +++ +++ +   +E++IL+++  LHH NV+ L    E+   V L++E  +GG+L D+L
Sbjct: 51  RASRRGVSR-EEIEREVSILRQV--LHH-NVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 208 VSKGTLSEDTIRIFLK 223
             K +LSE+    F+K
Sbjct: 107 AQKESLSEEEATSFIK 122

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 148 RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           R +++ +++ +   +E++IL+++  LHH NV+ L    E+   V L++E  +GG+L D+L
Sbjct: 51  RASRRGVSR-EEIEREVSILRQV--LHH-NVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 208 VSKGTLSEDTIRIFLK 223
             K +LSE+    F+K
Sbjct: 107 AQKESLSEEEATSFIK 122

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 148 RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           R +++ +++ +   +E++IL+++  LHH NV+ L    E+   V L++E  +GG+L D+L
Sbjct: 51  RASRRGVSR-EEIEREVSILRQV--LHH-NVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 208 VSKGTLSEDTIRIFLK 223
             K +LSE+    F+K
Sbjct: 107 AQKESLSEEEATSFIK 122

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 148 RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           R +++ +++ +   +E++IL+++  LHH NV+ L    E+   V L++E  +GG+L D+L
Sbjct: 51  RASRRGVSR-EEIEREVSILRQV--LHH-NVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 208 VSKGTLSEDTIRIFLK 223
             K +LSE+    F+K
Sbjct: 107 AQKESLSEEEATSFIK 122

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VA+K I KK LAK+   G+    +  L  L H ++++L    +S   + +V+E+  G 
Sbjct: 30  QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 88
Query: 202 DLADYLVSKGTLSEDTIRIFLK 223
           +L DY+V +  +SE   R F +
Sbjct: 89  ELFDYIVQRDKMSEQEARRFFQ 110

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VA+K I KK LAK+   G+    +  L  L H ++++L    +S   + +V+E+  G 
Sbjct: 34  QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 92
Query: 202 DLADYLVSKGTLSEDTIRIFLK 223
           +L DY+V +  +SE   R F +
Sbjct: 93  ELFDYIVQRDKMSEQEARRFFQ 114

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 145 AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           AIK I K ++  T N G  ++ +  L +L H N+++L    E  ++ YLVME   GG+L 
Sbjct: 50  AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Query: 205 DYLVSKGTLSEDTIRIFLK 223
           D ++ +   SE    + +K
Sbjct: 110 DEIILRQKFSEVDAAVIMK 128

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VA+K I KK LAK+   G+    +  L  L H ++++L    +S   + +V+E+  G 
Sbjct: 39  QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97
Query: 202 DLADYLVSKGTLSEDTIRIFLK 223
           +L DY+V +  +SE   R F +
Sbjct: 98  ELFDYIVQRDKMSEQEARRFFQ 119

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VA+K I KK LAK+   G+    +  L  L H ++++L    +S   + +V+E+  G 
Sbjct: 40  QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 98
Query: 202 DLADYLVSKGTLSEDTIRIFLK 223
           +L DY+V +  +SE   R F +
Sbjct: 99  ELFDYIVQRDKMSEQEARRFFQ 120

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 171 TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF-------LK 223
           ++L H+N+V ++   E D   YLVME+  G  L++Y+ S G LS DT   F       +K
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125
Query: 224 LHQMLQLYFHDFTPWSFVI 242
               +++   D  P + +I
Sbjct: 126 HAHDMRIVHRDIKPQNILI 144

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 145 AIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           AIK I K ++  T N G  ++ +  L +L H N+++L    E  ++ YLVME   GG+L 
Sbjct: 33  AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 92
Query: 205 DYLVSKGTLSEDTIRIFLK 223
           D ++ +   SE    + +K
Sbjct: 93  DEIILRQKFSEVDAAVIMK 111

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VA+K + ++ +      GK    ++ L    H ++++L     +   +++VME+ +GG+L
Sbjct: 44  VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 204 ADYLVSKGTLSE-DTIRIFLKL 224
            DY+   G L E ++ R+F ++
Sbjct: 104 FDYICKNGRLDEKESRRLFQQI 125

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           +A K I  + +   +    EI+++    +L H N+++L    ES   + LVME+ +GG+L
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVM---NQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 204 ADYLVSKG-TLSE-DTIRIFLK--------LHQMLQLYFHDFTP 237
            D ++ +   L+E DTI +F+K        +HQM  L+  D  P
Sbjct: 174 FDRIIDESYNLTELDTI-LFMKQICEGIRHMHQMYILHL-DLKP 215

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 148 RITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           R +++ + + +   +E++IL+++    H N++ L    E+   V L++E  +GG+L D+L
Sbjct: 51  RASRRGVCR-EEIEREVSILRQVL---HPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 208 VSKGTLSEDTIRIFLK 223
             K +LSE+    F+K
Sbjct: 107 AQKESLSEEEATSFIK 122

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 143 HVAIKRITKKNLAKTQNFGKEINILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGG 201
            VA+K + +K  A +      ++ LK +T+L  HEN+V LL        +YL+ E+C  G
Sbjct: 77  QVAVKMLKEK--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 202 DLADYLVSKG-TLSEDTI 218
           DL +YL SK    SED I
Sbjct: 135 DLLNYLRSKREKFSEDEI 152

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 146 IKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLAD 205
           I++I  K++ + +    E+ ++K+L   HH N+  L    E +Q++ LVME C+GG L D
Sbjct: 64  IRQINPKDVERIKT---EVRLMKKL---HHPNIARLYEVYEDEQYICLVMELCHGGHLLD 117
Query: 206 YLV-----SKGTLSEDTIR 219
            L      S G  + D ++
Sbjct: 118 KLNVFIDDSTGKCAMDVVK 136

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  A+K I+K+ + +    ++  +E+ +LK+L    H N+++L    E   + YLV E  
Sbjct: 58  QECAVKVISKRQVKQKTDKESLLREVQLLKQLD---HPNIMKLYEFFEDKGYFYLVGEVY 114
Query: 199 NGGDLADYLVSKGTLSE-DTIRI 220
            GG+L D ++S+   SE D  RI
Sbjct: 115 TGGELFDEIISRKRFSEVDAARI 137

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VA+K I ++  A  +N  +EI   + L    H N+V       +  H+ ++ME+ +GG+L
Sbjct: 48  VAVKYI-ERGAAIDENVQREIINHRSL---RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103
Query: 204 ADYLVSKGTLSEDTIRIFLK 223
            + + + G  SED  R F +
Sbjct: 104 YERICNAGRFSEDEARFFFQ 123

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 155 AKTQNFGKEINILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT 212
           A+ Q    E+N+L+EL    H N+V         ++  +Y+VME+C GGDLA  +++KGT
Sbjct: 47  AEKQMLVSEVNLLREL---KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT 102
Query: 213 LSEDTIRIFLKLHQMLQL 230
                +     L  M QL
Sbjct: 103 KERQYLDEEFVLRVMTQL 120

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 155 AKTQNFGKEINILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT 212
           A+ Q    E+N+L+EL    H N+V         ++  +Y+VME+C GGDLA  +++KGT
Sbjct: 47  AEKQMLVSEVNLLREL---KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT 102
Query: 213 LSEDTIRIFLKLHQMLQL 230
                +     L  M QL
Sbjct: 103 KERQYLDEEFVLRVMTQL 120

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGD 202
           VA+K I  KN A  Q F  E +++   T+L H N+V+LL    E    +Y+V E+   G 
Sbjct: 38  VAVKCI--KNDATAQAFLAEASVM---TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 203 LADYLVSKG 211
           L DYL S+G
Sbjct: 93  LVDYLRSRG 101

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  A+K I+K+ + +    ++  +E+ +LK+L    H N+++L    E   + YLV E  
Sbjct: 52  QECAVKVISKRQVKQKTDKESLLREVQLLKQL---DHPNIMKLYEFFEDKGYFYLVGEVY 108
Query: 199 NGGDLADYLVSKGTLSE-DTIRI 220
            GG+L D ++S+   SE D  RI
Sbjct: 109 TGGELFDEIISRKRFSEVDAARI 131

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
           KE++IL++++   H N+++L    E++   +LV +    G+L DYL  K TLSE   R  
Sbjct: 59  KEVDILRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 116
Query: 222 LK 223
           ++
Sbjct: 117 MR 118

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
           KE++IL++++   H N+++L    E++   +LV +    G+L DYL  K TLSE   R  
Sbjct: 72  KEVDILRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 222 LK 223
           ++
Sbjct: 130 MR 131

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 155 AKTQNFGKEINILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT 212
           A+ Q    E+N+L+EL    H N+V         ++  +Y+VME+C GGDLA  +++KGT
Sbjct: 47  AEKQMLVSEVNLLRELK---HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGT 102
Query: 213 LSEDTIRIFLKLHQMLQL 230
                +     L  M QL
Sbjct: 103 KERQYLDEEFVLRVMTQL 120

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGD 202
           VA+K I  KN A  Q F  E +++   T+L H N+V+LL    E    +Y+V E+   G 
Sbjct: 32  VAVKCI--KNDATAQAFLAEASVM---TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 203 LADYLVSKG 211
           L DYL S+G
Sbjct: 87  LVDYLRSRG 95

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 162 KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
           KE++IL++++   H N+++L    E++   +LV +    G+L DYL  K TLSE   R  
Sbjct: 72  KEVDILRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 129
Query: 222 LK 223
           ++
Sbjct: 130 MR 131

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 146 IKRITK-KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 204
           IK I K ++    +    EI +LK L    H N++++    E   ++Y+VME C GG+L 
Sbjct: 52  IKTINKDRSQVPMEQIEAEIEVLKSLD---HPNIIKIFEVFEDYHNMYIVMETCEGGELL 108
Query: 205 DYLVS---KG-TLSEDTIRIFLKLHQMLQLYFH 233
           + +VS   +G  LSE  +   +K       YFH
Sbjct: 109 ERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGD 202
           VA+K I  KN A  Q F  E +++   T+L H N+V+LL    E    +Y+V E+   G 
Sbjct: 47  VAVKCI--KNDATAQAFLAEASVM---TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 203 LADYLVSKG 211
           L DYL S+G
Sbjct: 102 LVDYLRSRG 110

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  A+K I+K+ + +    ++  +E+ +LK+L    H N+++L    E   + YLV E  
Sbjct: 75  QECAVKVISKRQVKQKTDKESLLREVQLLKQL---DHPNIMKLYEFFEDKGYFYLVGEVY 131
Query: 199 NGGDLADYLVSKGTLSE-DTIRIFLKL 224
            GG+L D ++S+   SE D  RI  ++
Sbjct: 132 TGGELFDEIISRKRFSEVDAARIIRQV 158

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGD 202
           VA+K I  KN A  Q F  E +++   T+L H N+V+LL    E    +Y+V E+   G 
Sbjct: 219 VAVKCI--KNDATAQAFLAEASVM---TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 203 LADYLVSKG 211
           L DYL S+G
Sbjct: 274 LVDYLRSRG 282

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  A+K I+K+ + +    ++  +E+ +LK+L    H N+++L    E   + YLV E  
Sbjct: 76  QECAVKVISKRQVKQKTDKESLLREVQLLKQL---DHPNIMKLYEFFEDKGYFYLVGEVY 132
Query: 199 NGGDLADYLVSKGTLSE-DTIRIFLKL 224
            GG+L D ++S+   SE D  RI  ++
Sbjct: 133 TGGELFDEIISRKRFSEVDAARIIRQV 159

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-24
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-19
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-23
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-18
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-22
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-17
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-22
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-14
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-21
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-20
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-19
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-19
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-10
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-19
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-19
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	6e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-19
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-18
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-18
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-18
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-18
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	9e-18
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-18
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-09
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-07
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-17
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-17
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-17
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-17
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-17
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-17
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-17
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-17
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-15
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-17
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-17
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-17
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-16
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-16
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	7e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-16
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	7e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-16
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-16
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-16
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-16
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-16
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-16
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-08
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-15
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-15
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-15
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-15
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-15
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-15
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-06
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-15
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-13
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-13
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-15
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-07
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-15
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-14
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-14
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-14
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-14
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-14
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-13
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-14
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-13
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-13
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-09
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-13
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-13
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-04
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-11
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-11
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-11
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	9e-11
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-10
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-10
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-10
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-10
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-10
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-10
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-10
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-10
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-10
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-10
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-10
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-09
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-09
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-09
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-09
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-09
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-09
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-09
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-09
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-09
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	8e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	9e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	9e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-08
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-08
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-08
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	9e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	8e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-05
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-07
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-07
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	7e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-06
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-05
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	6e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	7e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	8e-04

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 96.7 bits (241), Expect = 9e-24
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  AIK +  +        ++  EI  L +L + H + ++ L   + +DQ++Y+VME C 
Sbjct: 34  QIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLYDYEITDQYIYMVME-CG 91

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
             DL  +L  K ++     + + K   ML+     H 
Sbjct: 92  NIDLNSWLKKKKSIDPWERKSYWK--NMLEAVHTIHQ 126

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 84.0 bits (208), Expect = 4e-19
 Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 5/155 (3%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKEL 61
             K   K+D++S+G I++    GK PF        K +   +     + P     +L+++
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 253

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSA 121
           L   LKR+   RIS  +L AHP++Q    HP+       +                 NS 
Sbjct: 254 LKCCLKRDPKQRISIPELLAHPYVQI-QTHPVNQMAKGTTEEMKYVLGQLVGL----NSP 308

Query: 122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK 156
           + +  +                 + K   KK   K
Sbjct: 309 NSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGKK 343

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  AIK +  +        ++  EI  L +L + H + ++ L   + +DQ++Y+VME C 
Sbjct: 53  QIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLYDYEITDQYIYMVME-CG 110

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
             DL  +L  K ++     + + K   ML+     H 
Sbjct: 111 NIDLNSWLKKKKSIDPWERKSYWK--NMLEAVHTIHQ 145

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 80.0 bits (198), Expect = 8e-18
 Identities = 25/85 (29%), Positives = 42/85 (49%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            K   K+D++S+G I++    GK PF        K +   +     + P     +L+++L
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 273

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQP 87
              LKR+   RIS  +L AHP++Q 
Sbjct: 274 KCCLKRDPKQRISIPELLAHPYVQI 298

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 93.3 bits (232), Expect = 2e-22
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  AIK +  +        ++  EI  L +L + H + ++ L   + +DQ++Y+VME C 
Sbjct: 81  QIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLYDYEITDQYIYMVME-CG 138

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
             DL  +L  K ++     + + K   ML+     H 
Sbjct: 139 NIDLNSWLKKKKSIDPWERKSYWK--NMLEAVHTIHQ 173

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 33/150 (22%), Positives = 55/150 (36%), Gaps = 1/150 (0%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            K   K+D++S+G I++    GK PF        K +   +     + P     +L+++L
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSAD 122
              LKR+   RIS  +L AHP++Q    HP+       +                 +   
Sbjct: 302 KCCLKRDPKQRISIPELLAHPYVQI-QTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILK 360

Query: 123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKK 152
              T     S      + S     K+  KK
Sbjct: 361 AAKTLYEHYSGGESHNSSSSKTFEKKRGKK 390

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 92.5 bits (230), Expect = 3e-22
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 142 QHVAIKRITKKNLAKTQ-NFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEFC 198
              AIK     +  +      +E  +LK+L   +H+N+V+L   +E    +H  L+MEFC
Sbjct: 35  DLFAIKVFNNISFLRPVDVQMREFEVLKKL---NHKNIVKLFAIEEETTTRHKVLIMEFC 91

Query: 199 NGGDLADYLVSKGT---LSEDTIRIFLKLHQMLQ--LYFHD 234
             G L   L        L E    I L+   ++    +  +
Sbjct: 92  PCGSLYTVLEEPSNAYGLPESEFLIVLR--DVVGGMNHLRE 130

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 26/109 (23%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ---------------------- 38
              KY A  DL+S+G   +   TG  PF     P+  +                      
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE 255

Query: 39  ----YYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP 83
                +  ++ +   +  G    L  +L  +L+ +      F+Q FA  
Sbjct: 256 NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 89.9 bits (223), Expect = 5e-21
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEFC 198
              AIK     +  +      +E  +LK+L   +H+N+V+L   +E    +H  L+MEFC
Sbjct: 35  DLFAIKVFNNISFLRPVDVQMREFEVLKKL---NHKNIVKLFAIEEETTTRHKVLIMEFC 91

Query: 199 NGGDLADYLVSKGT---LSEDTIRIFLKLHQMLQ--LYFHD 234
             G L   L        L E    I L+   ++    +  +
Sbjct: 92  PCGSLYTVLEEPSNAYGLPESEFLIVLR--DVVGGMNHLRE 130

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 62.2 bits (151), Expect = 2e-11
 Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 26/108 (24%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVP----------- 48
              KY A  DL+S+G   +   TG  PF     P+  K+   K +   P           
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE 255

Query: 49  --------------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH 82
                          +  G    L  +L  +L+ +      F+Q FA 
Sbjct: 256 NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 85.3 bits (212), Expect = 7e-20
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           +  A K + K  L K     K   EI+I + L    H++VV      E +  V++V+E C
Sbjct: 41  EVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFFEDNDFVFVVLELC 97

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
               L +    +  L+E   R +  L Q++    Y H
Sbjct: 98  RRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLH 132

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 3/106 (2%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +  + D++S+G I++  L GK PF  +   +    Y +       +P   +     L+  
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---YLRIKKNEYSIPKHINPVAASLIQK 248

Query: 65  LLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDS 110
           +L+ +   R +  +L    F         +P      P   S   S
Sbjct: 249 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPS 294

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
              A K+I K  +     F +EI I+K L    H N++ L    E +  +YLVME C GG
Sbjct: 35  IRRAAKKIPKYFVEDVDRFKQEIEIMKSLD---HPNIIRLYETFEDNTDIYLVMELCTGG 91

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           +L + +V K    E      +K   +L    Y H 
Sbjct: 92  ELFERVVHKRVFRESDAARIMK--DVLSAVAYCHK 124

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 1/93 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELL 62
            Y  + D +S G +++  L G  PF A +  ++  +  E       K  +  S + + L+
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLI 242

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
             LL ++   RI+  Q   H + +         
Sbjct: 243 RRLLTKSPKQRITSLQALEHEWFEKQLSSSPRN 275

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 86.3 bits (213), Expect = 2e-19
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 13/92 (14%)

Query: 142 QHVAIKRITKKNLAKTQ-NFGKEINILKELTELHHENVVELLHCKESDQHV------YLV 194
           + VAIK+  ++   K +  +  EI I+K+L   +H NVV      +  Q +       L 
Sbjct: 40  EQVAIKQCRQELSPKNRERWCLEIQIMKKL---NHPNVVSAREVPDGLQKLAPNDLPLLA 96

Query: 195 MEFCNGGDLADYLVSKGT---LSEDTIRIFLK 223
           ME+C GGDL  YL        L E  IR  L 
Sbjct: 97  MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 59.3 bits (143), Expect = 3e-10
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 21/106 (19%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--------------------KQYYEKN 43
           KY    D +S GT+ F+C+TG  PF+ N  P                            +
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258

Query: 44  LVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL 88
           ++  P  +    + +L+  L  +L  +   R +  Q       Q L
Sbjct: 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 84.7 bits (210), Expect = 2e-19
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           +  A K + K  L K     K   EI+I + L    H++VV      E +  V++V+E C
Sbjct: 67  EVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFFEDNDFVFVVLELC 123

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
               L +    +  L+E   R +  L Q++    Y H
Sbjct: 124 RRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLH 158

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +  + D++S+G I++  L GK PF  +    LK+ Y +       +P   +     L+  
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSC---LKETYLRIKKNEYSIPKHINPVAASLIQK 274

Query: 65  LLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDD 113
           +L+ +   R +  +L    F         +P      P   S   S+ D
Sbjct: 275 MLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLD 323

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +  A+K I K    +  +   EI +LK++    HEN+V L    ES  H YLVM+  +GG
Sbjct: 35  KLFALKCIKKSPAFRDSSLENEIAVLKKI---KHENIVTLEDIYESTTHYYLVMQLVSGG 91

Query: 202 DLADYLVSKGTLSE-DTIRIFLKLHQMLQ--LYFHD 234
           +L D ++ +G  +E D   +     Q+L    Y H+
Sbjct: 92  ELFDRILERGVYTEKDASLVI---QQVLSAVKYLHE 124

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 19/92 (20%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV----------PKVPVGT 54
           Y    D +S+G I +  L G  PF   +  +L   +EK  +              +    
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKL---FEK--IKEGYYEFESPFWDDI---- 234

Query: 55  SAELKELLLGLLKRNAMDRISFEQLFAHPFLQ 86
           S   K+ +  LL+++  +R + E+  +HP++ 
Sbjct: 235 SESAKDFICHLLEKDPNERYTCEKALSHPWID 266

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
              A K I  K L+    Q   +E  I ++L    H N+V L    + +   YLV +   
Sbjct: 32  LEFAAKIINTKKLSARDFQKLEREARICRKL---QHPNIVRLHDSIQEESFHYLVFDLVT 88

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG+L + +V++   SE      ++  Q+L+   Y H 
Sbjct: 89  GGELFEDIVAREFYSEADASHCIQ--QILESIAYCHS 123

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELLL 63
           Y    D+++ G I++  L G  PF      +L  Q                + E K L+ 
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAP 90
            +L  N   RI+ +Q    P++     
Sbjct: 244 SMLTVNPKKRITADQALKVPWICNRER 270

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 83.1 bits (206), Expect = 8e-19
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
              A K I  K L+    Q   +E  I ++L    H N+V L    + +   YLV +   
Sbjct: 55  LEFAAKIINTKKLSARDFQKLEREARICRKLQ---HPNIVRLHDSIQEESFHYLVFDLVT 111

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG+L + +V++   SE      ++  Q+L+   Y H 
Sbjct: 112 GGELFEDIVAREFYSEADASHCIQ--QILESIAYCHS 146

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELLL 63
           Y    D+++ G I++  L G  PF      +L  Q                + E K L+ 
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
            +L  N   RI+ +Q    P++          
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERVASAI 298

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 82.0 bits (203), Expect = 4e-18
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  A   I  K L+    Q   +E  I + L    H N+V L      + H YL+ +   
Sbjct: 37  QEYAAMIINTKKLSARDHQKLEREARICRLL---KHPNIVRLHDSISEEGHHYLIFDLVT 93

Query: 200 GGDLADYLVSKGTLSE----DTIRIFLK----LHQM 227
           GG+L + +V++   SE      I+  L+     HQM
Sbjct: 94  GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP-VGTSAELKELLL 63
           Y    DL++ G I++  L G  PF      +L Q  +      P       + E K+L+ 
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHA 99
            +L  N   RI+  +   HP++   +          
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQE 285

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 80.4 bits (199), Expect = 4e-18
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  A+K I K +     T    +E+ +LK+L    H N+++L    E     Y+V E   
Sbjct: 48  QEYAVKVINKASAKNKDTSTILREVELLKKLD---HPNIMKLFEILEDSSSFYIVGELYT 104

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG+L D ++ +   SE      +K  Q+     Y H 
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIK--QVFSGITYMHK 139

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP-VGTSAELKELL 62
            YD K D++S G I++  L+G  PF   +   + +  E              S + K+L+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ 86
             +L  +   RI+  Q   HP++Q
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQ 281

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 81.7 bits (202), Expect = 5e-18
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  A+K I K +     T    +E+ +LK+L    H N+++L    E     Y+V E   
Sbjct: 48  QEYAVKVINKASAKNKDTSTILREVELLKKL---DHPNIMKLFEILEDSSSFYIVGELYT 104

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG+L D ++ +   SE      +K  Q+     Y H 
Sbjct: 105 GGELFDEIIKRKRFSEHDAARIIK--QVFSGITYMHK 139

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP-VGTSAELKELL 62
            YD K D++S G I++  L+G  PF   +   + +  E              S + K+L+
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLS 106
             +L  +   RI+  Q   HP++Q  +               ++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMT 301

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 81.7 bits (202), Expect = 6e-18
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
              AIK I K +++ +      +E+ +LK L    H N+++L    E  ++ YLVME   
Sbjct: 63  VERAIKIIRKTSVSTSSNSKLLEEVAVLKLL---DHPNIMKLYDFFEDKRNYYLVMECYK 119

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG+L D ++ +   +E    + +K  Q+L    Y H 
Sbjct: 120 GGELFDEIIHRMKFNEVDAAVIIK--QVLSGVTYLHK 154

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP-VGTSAELKELL 62
           KYD K D++S+G I+F  L G  PF   +  ++ +  EK             S   K+L+
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLS 106
             +L+ ++  RIS +Q   HP+++ +                + 
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIE 316

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 80.5 bits (199), Expect = 7e-18
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 14/103 (13%)

Query: 142 QHVAIKRITKKNLAKT--------QNFGKEINILKELTELHHENVVELLHCKESDQHVYL 193
              A+K +       +        +   +E +IL+++    H +++ L+   ES   ++L
Sbjct: 120 HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG--HPHIITLIDSYESSSFMFL 177

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           V +    G+L DYL  K  LSE   R  ++   +L+   + H 
Sbjct: 178 VFDLMRKGELFDYLTEKVALSEKETRSIMR--SLLEAVSFLHA 218

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELL 62
            Y  + DL++ G I+F  L G  PF       + +   E             S+ +K+L+
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLI 340

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ 86
             LL+ +   R++ EQ   HPF +
Sbjct: 341 SRLLQVDPEARLTAEQALQHPFFE 364

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 79.6 bits (197), Expect = 9e-18
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)

Query: 142 QHVAIKRITKKNLAKT---------QNFGKEINILKELTELHHENVVELLHCKESDQHVY 192
           +  A+K I                 +   KE++IL++++   H N+++L    E++   +
Sbjct: 43  KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG--HPNIIQLKDTYETNTFFF 100

Query: 193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           LV +    G+L DYL  K TLSE   R  ++   +L+     H 
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMR--ALLEVICALHK 142

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELL 62
            Y  + D++S G I++  L G  PF       + +     N           S  +K+L+
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 264

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ 86
              L      R + E+  AHPF Q
Sbjct: 265 SRFLVVQPQKRYTAEEALAHPFFQ 288

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 80.9 bits (200), Expect = 9e-18
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 10/98 (10%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  A+K I+K+ + +  +      E+ +LK+L    H N+++L    E   + YLV E  
Sbjct: 52  QECAVKVISKRQVKQKTDKESLLREVQLLKQL---DHPNIMKLYEFFEDKGYFYLVGEVY 108

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            GG+L D ++S+   SE      ++  Q+L    Y H 
Sbjct: 109 TGGELFDEIISRKRFSEVDAARIIR--QVLSGITYMHK 144

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 54.3 bits (131), Expect = 8e-09
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP-VGTSAELKELL 62
            YD K D++S G I++  L+G  PF   +   + +  EK             S   K+L+
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPV 103
             +L      RIS      H ++Q      +  +  +    
Sbjct: 263 RKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNA 303

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 142 QHVAIKRITKKNLA--------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL 193
           + VAI+ I+K+  A           N   EI ILK+L   +H  ++++ +  +  +  Y+
Sbjct: 161 KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL---NHPCIIKIKNFFD-AEDYYI 216

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           V+E   GG+L D +V    L E T +++    QML    Y H+
Sbjct: 217 VLELMEGGELFDKVVGNKRLKEATCKLYFY--QMLLAVQYLHE 257

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 48.5 bits (116), Expect = 7e-07
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIA-NSPPQL-KQYYEKNLVLVPKVPVGTSAELKEL 61
            Y+   D +S+G I+F CL+G  PF    +   L  Q        +P+V    S +  +L
Sbjct: 320 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 379

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQ 86
           +  LL  +   R + E+   HP+LQ
Sbjct: 380 VKKLLVVDPKARFTTEEALRHPWLQ 404

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             VA+K + ++ +      GK   EI  LK      H ++++L     +    ++VME+ 
Sbjct: 37  HKVAVKILNRQKIRSLDVVGKIKREIQNLKLF---RHPHIIKLYQVISTPTDFFMVMEYV 93

Query: 199 NGGDLADYLVSKGTLSEDTIRIF 221
           +GG+L DY+   G + E   R  
Sbjct: 94  SGGELFDYICKHGRVEEMEARRL 116

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            Y   + D++S G I++  L G  PF     P L   ++K    V  +P   +  +  LL
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL---FKKIRGGVFYIPEYLNRSVATLL 242

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPE 96
           + +L+ + + R + + +  H + +   P  L PE
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPE 276

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 78.5 bits (194), Expect = 3e-17
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 5/82 (6%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VAIK I K  L  T  Q   +E+ I+K L   +H N+V+L    E+++ +YL+ME+ +
Sbjct: 41  REVAIKIIDKTQLNPTSLQKLFREVRIMKIL---NHPNIVKLFEVIETEKTLYLIMEYAS 97

Query: 200 GGDLADYLVSKGTLSEDTIRIF 221
           GG++ DYLV+ G + E   R  
Sbjct: 98  GGEVFDYLVAHGRMKEKEARSK 119

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           KYD  + D++S+G I++  ++G  PF   +  +L    E+ L    ++P   S + + LL
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL---RERVLRGKYRIPFYMSTDCENLL 245

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPE 108
              L  N + R + EQ+    ++        +             +
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQK 291

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 78.5 bits (194), Expect = 3e-17
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q  A+K I+K+  A TQ    EI  LK      H N+V+L        H +LVME  NGG
Sbjct: 37  QAFAVKIISKRMEANTQK---EITALKLCE--GHPNIVKLHEVFHDQLHTFLVMELLNGG 91

Query: 202 DLADYLVSKGTLSE----DTIRIFLK----LHQM 227
           +L + +  K   SE      +R  +     +H +
Sbjct: 92  ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT--------- 54
            YD   DL+S+G I++  L+G+ PF ++          +   ++ K+  G          
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE---IMKKIKKGDFSFEGEAWK 241

Query: 55  --SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
             S E K+L+ GLL  +   R+    L  + +LQ  +     P
Sbjct: 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP 284

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 78.1 bits (193), Expect = 4e-17
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q  A+K I K+         +E+ +L +     H NV+EL+   E +   YLV E   GG
Sbjct: 39  QEYAVKIIEKQPGHIRSRVFREVEMLYQCQ--GHRNVLELIEFFEEEDRFYLVFEKMRGG 96

Query: 202 DLADYLVSKGTLSE 215
            +  ++  +   +E
Sbjct: 97  SILSHIHKRRHFNE 110

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 16/111 (14%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-----KVPVGT---- 54
            YD + DL+S+G I++  L+G  PF+            +            +  G     
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261

Query: 55  -------SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPH 98
                  S   K+L+  LL R+A  R+S  Q+  HP++Q  AP   +P P 
Sbjct: 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPM 312

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 13/101 (12%)

Query: 142 QHVAIKRITKKNLAKTQNFG------KEINILKELTELHHENVVELLHCKESDQHVYLVM 195
           +  A K I K+ L+ ++         +E+NIL+E+    H N++ L    E+   V L++
Sbjct: 31  KEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI---RHPNIITLHDIFENKTDVVLIL 87

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           E  +GG+L D+L  K +L+ED    FLK  Q+L    Y H 
Sbjct: 88  ELVSGGELFDFLAEKESLTEDEATQFLK--QILDGVHYLHS 126

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 11/98 (11%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             VAIK I KK + K     +   E+ I  +L    H +++EL +  E   +VYLV+E C
Sbjct: 37  LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL---KHPSILELYNYFEDSNYVYLVLEMC 93

Query: 199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQ--LYFH 233
           + G++  YL ++    SE+  R F  +HQ++   LY H
Sbjct: 94  HNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLH 129

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 57.9 bits (141), Expect = 3e-10
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +  ++D++S+G + +  L G+ PF  ++         K ++   ++P   S E K+L+  
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---LNKVVLADYEMPSFLSIEAKDLIHQ 245

Query: 65  LLKRNAMDRISFEQLFAHPFLQ 86
           LL+RN  DR+S   +  HPF+ 
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMS 267

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 79.0 bits (195), Expect = 4e-17
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VA+KRI  +  +      +E+ +L+E  E  H NV+     ++  Q  Y+ +E C   
Sbjct: 49  RDVAVKRILPECFSFAD---REVQLLRESDE--HPNVIRYFCTEKDRQFQYIAIELC-AA 102

Query: 202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQ--LYFHD 234
            L +Y+  K            L+  Q      + H 
Sbjct: 103 TLQEYVEQKDFAHLGLEPITLLQ--QTTSGLAHLHS 136

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 60.2 bits (146), Expect = 8e-11
 Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 1/87 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
                 D++S G + +  ++ G  PF  +   Q         +             +EL+
Sbjct: 205 NPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELI 264

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLA 89
             ++  +   R S + +  HPF   L 
Sbjct: 265 EKMIAMDPQKRPSAKHVLKHPFFWSLE 291

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VA+K +  K      +N  KEI I K L   +HENVV+    +      YL +E+C+G
Sbjct: 33  EAVAVKIVDMKRAVDCPENIKKEICINKML---NHENVVKFYGHRREGNIQYLFLEYCSG 89

Query: 201 GDLADYLVSKGTLSEDTIRIF 221
           G+L D +     + E   + F
Sbjct: 90  GELFDRIEPDIGMPEPDAQRF 110

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPF--IANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           ++     D++S G ++   L G+ P+   ++S  +   + EK   L P   +   +    
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLA 240

Query: 61  LLLGLLKRNAMDRISFEQLFAHP-FLQPLAPHPLIP 95
           LL  +L  N   RI+   +     + +PL      P
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 16/103 (15%)

Query: 142 QHVAIKRITKKNLA--------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL 193
           + VAIK I+K+  A           N   EI ILK+L   +H  ++++ +  +  +  Y+
Sbjct: 36  KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL---NHPCIIKIKNFFD-AEDYYI 91

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           V+E   GG+L D +V    L E T +++    QML    Y H+
Sbjct: 92  VLELMEGGELFDKVVGNKRLKEATCKLYFY--QMLLAVQYLHE 132

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 2/95 (2%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ--LKQYYEKNLVLVPKVPVGTSAELKEL 61
            Y+   D +S+G I+F CL+G  PF  +        Q        +P+V    S +  +L
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 254

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPE 96
           +  LL  +   R + E+   HP+LQ         +
Sbjct: 255 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 289

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 77.8 bits (192), Expect = 7e-17
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 2/146 (1%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
             Y+ K+D++++G ++++  T K  F A S   L           P V +  S +L+ L+
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF--PPVSLHYSYDLRSLV 257

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSAD 122
             L KRN  DR S   +    F+       L P+  A      +        +     A 
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPAS 317

Query: 123 VVSTSPPRPSSLLLSPAPSQHVAIKR 148
             ++    P+  +  PA    + +  
Sbjct: 318 GQNSISVMPAQKITKPAAKYGIPLAY 343

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 72.4 bits (178), Expect = 5e-15
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           +   IK I    ++    +   +E+ +L  +    H N+V+     E +  +Y+VM++C 
Sbjct: 50  RQYVIKEINISRMSSKEREESRREVAVLANM---KHPNIVQYRESFEENGSLYIVMDYCE 106

Query: 200 GGDLADYLVS--KGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GGDL   + +       ED I  +    Q+     + HD
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFV--QICLALKHVHD 143

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 13/101 (12%)

Query: 142 QHVAIKRITKKNLAKTQNFG------KEINILKELTELHHENVVELLHCKESDQHVYLVM 195
              A K I K+    ++         +E++IL+++    H NV+ L    E+   V L++
Sbjct: 38  LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV---LHHNVITLHDVYENRTDVVLIL 94

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           E  +GG+L D+L  K +LSE+    F+K  Q+L    Y H 
Sbjct: 95  ELVSGGELFDFLAQKESLSEEEATSFIK--QILDGVNYLHT 133

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 19/98 (19%), Positives = 44/98 (44%), Gaps = 1/98 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLL 63
              +AD++S+G I +  L+G +PF+ ++  + L      +     +    TS   K+ + 
Sbjct: 195 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIR 254

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGS 101
            LL +    R++ ++   HP++ P+     +    +  
Sbjct: 255 KLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 78.3 bits (193), Expect = 7e-17
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 13/100 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VA+KR+             EI +L E     H NV+     + +D+ +Y+ +E C   
Sbjct: 40  RPVAVKRMLID---FCDIALMEIKLLTES--DDHPNVIRYYCSETTDRFLYIALELC-NL 93

Query: 202 DLADYLVSKGTLSEDTIRIFLK-----LHQMLQ--LYFHD 234
           +L D + SK    E+            L Q+     + H 
Sbjct: 94  NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 4   KYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQ---LKQYYEKNLVLVPKVPVGTSAELK 59
           +     D++S+G + +  L+ GK PF      +   ++  +  +  +         AE  
Sbjct: 215 RLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEAT 273

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLA 89
           +L+  ++  + + R +  ++  HP   P +
Sbjct: 274 DLISQMIDHDPLKRPTAMKVLRHPLFWPKS 303

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 78.3 bits (193), Expect = 8e-17
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
            + A K +   + +  +   KEI  +  L    H  +V L    E D  + ++ EF +GG
Sbjct: 183 NNFAAKFVMTPHESDKETVRKEIQTMSVL---RHPTLVNLHDAFEDDNEMVMIYEFMSGG 239

Query: 202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQ--LYFHD 234
           +L + +  +   +SED    +++  Q+ +   + H+
Sbjct: 240 ELFEKVADEHNKMSEDEAVEYMR--QVCKGLCHMHE 273

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VA+K +  K      +N  KEI I K L   +HENVV+    +      YL +E+C+G
Sbjct: 33  EAVAVKIVDMKRAVDCPENIKKEICINKML---NHENVVKFYGHRREGNIQYLFLEYCSG 89

Query: 201 GDLADYLVSKGTLSEDTIRIF 221
           G+L D +     + E   + F
Sbjct: 90  GELFDRIEPDIGMPEPDAQRF 110

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 5/143 (3%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPF--IANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           ++     D++S G ++   L G+ P+   ++S  +   + EK   L P   +   +    
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI--DSAPLA 240

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNS 120
           LL  +L  N   RI+   +    +                  V+ SP   +       + 
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDF 300

Query: 121 ADVVSTSPPRPSSLLLSPAPSQH 143
           + V S S    S          H
Sbjct: 301 SPVNSASRTPGSGWSKEHHHHHH 323

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 77.9 bits (192), Expect = 1e-16
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             VA+K + ++ +      GK   EI  LK      H ++++L     +   +++VME+ 
Sbjct: 42  HKVAVKILNRQKIRSLDVVGKIRREIQNLKLF---RHPHIIKLYQVISTPSDIFMVMEYV 98

Query: 199 NGGDLADYLVSKGTLSEDTIRIF 221
           +GG+L DY+   G L E   R  
Sbjct: 99  SGGELFDYICKNGRLDEKESRRL 121

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            Y   + D++S G I++  L G  PF  +  P L   ++K    +   P   +  +  LL
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL---FKKICDGIFYTPQYLNPSVISLL 247

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPE 108
             +L+ + M R + + +  H + +   P  L PE  + S   +  E
Sbjct: 248 KHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDE 293

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 77.4 bits (191), Expect = 1e-16
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
             +A K I  + +   +    EI+++ +L    H N+++L    ES   + LVME+ +GG
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKNEISVMNQL---DHANLIQLYDAFESKNDIVLVMEYVDGG 171

Query: 202 DLADYLVSKG-TLSEDTIRIFLK--------LHQM 227
           +L D ++ +   L+E    +F+K        +HQM
Sbjct: 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM 206

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLL 63
                D++SVG I +  L+G +PF+ ++  + L         L  +     S E KE + 
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPE 96
            LL +    RIS  +   HP+L     H  +  
Sbjct: 325 KLLIKEKSWRISASEALKHPWLSDHKLHSRLSA 357

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)

Query: 142 QHVAIKRITKKNLAK-----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
           Q  A+K +            T++  +E +I   L    H ++VELL    SD  +Y+V E
Sbjct: 50  QQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHPHIVELLETYSSDGMLYMVFE 106

Query: 197 FCNGGDLADYLVSKGT----LSEDTIRIFLKLHQMLQ--LYFHD 234
           F +G DL   +V +       SE     +++  Q+L+   Y HD
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMR--QILEALRYCHD 148

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 19/82 (23%), Positives = 36/82 (43%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y    D++  G I+F  L+G  PF        +   +    + P+     S   K+L+  
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269

Query: 65  LLKRNAMDRISFEQLFAHPFLQ 86
           +L  +  +RI+  +   HP+L+
Sbjct: 270 MLMLDPAERITVYEALNHPWLK 291

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 77.8 bits (192), Expect = 1e-16
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 20/108 (18%)

Query: 142 QHVAIKRITKKNLAKT-------------QNFGKEINILKELTELHHENVVELLHCKESD 188
              AIK I K    K              +    EI++LK L    H N+++L    E  
Sbjct: 62  SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL---DHPNIIKLFDVFEDK 118

Query: 189 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           ++ YLV EF  GG+L + ++++    E      +K  Q+L    Y H 
Sbjct: 119 KYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK--QILSGICYLHK 164

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 1/94 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP-VGTSAELKELL 62
           KY+ K D++S G I++  L G  PF   +   + +  EK             S E KEL+
Sbjct: 223 KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI 282

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPE 96
             +L  +   R + E+     +++  A +    +
Sbjct: 283 KLMLTYDYNKRCTAEEALNSRWIKKYANNINKSD 316

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +    K I             EI+I+ +L   HH  ++ L    E    + L++EF +GG
Sbjct: 77  RVFVAKFINTPYPLDKYTVKNEISIMNQL---HHPKLINLHDAFEDKYEMVLILEFLSGG 133

Query: 202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQ--LYFHD 234
           +L D + ++   +SE  +  +++  Q  +   + H+
Sbjct: 134 ELFDRIAAEDYKMSEAEVINYMR--QACEGLKHMHE 167

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 1/94 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLL 63
                D++++G + +  L+G +PF      + L+     +           S E K+ + 
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK 286

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEP 97
            LL++    R++      HP+L+    +     P
Sbjct: 287 NLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIP 320

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 76.5 bits (189), Expect = 2e-16
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 10/99 (10%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           Q  A K + K+   +        EI +L+         V+ L    E+   + L++E+  
Sbjct: 55  QEYAAKFLKKRRRGQDCRAEILHEIAVLELAK--SCPRVINLHEVYENTSEIILILEYAA 112

Query: 200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG++    + +    +SE+ +   +K  Q+L+   Y H 
Sbjct: 113 GGEIFSLCLPELAEMVSENDVIRLIK--QILEGVYYLHQ 149

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 17/105 (16%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC----KESDQHVYLVME 196
               A+KRI        +   +E ++ +     +H N++ L+      + +    +L++ 
Sbjct: 54  GHFYALKRILCHEQQDREEAQREADMHRLF---NHPNILRLVAYCLRERGAKHEAWLLLP 110

Query: 197 FCNGGDLADYL----VSKGTLSEDTI-RIFLKLHQMLQ--LYFHD 234
           F   G L + +         L+ED I  +      + +     H 
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLL---LGICRGLEAIHA 152

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 1/87 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
            D + D++S+G +++  + G+ P+                 L        S+ L +LL  
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNS 282

Query: 65  LLKRNAMDRISFEQLFAHP-FLQPLAP 90
           ++  +   R     L +    LQP AP
Sbjct: 283 MMTVDPHQRPHIPLLLSQLEALQPPAP 309

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 13/101 (12%)

Query: 142 QHVAIKRITKKNLAKT------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
              A K I K+    +      ++  +E++ILKE+    H NV+ L    E+   V L++
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI---QHPNVITLHEVYENKTDVILIL 93

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           E   GG+L D+L  K +L+E+    FLK  Q+L    Y H 
Sbjct: 94  ELVAGGELFDFLAEKESLTEEEATEFLK--QILNGVYYLHS 132

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 142 QHVAIKRITKKNLAKT------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
              A K I K+    +      +   +E++IL+++    H N++ L    E+   V L++
Sbjct: 38  LEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV---LHPNIITLHDVYENRTDVVLIL 94

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLK--------LHQM 227
           E  +GG+L D+L  K +LSE+    F+K        LH  
Sbjct: 95  ELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGK------EINILKEL-TELHHENVVELLHCKESDQHVYLV 194
             VAIK I +  +              E+ +L ++     H  V+ LL   E+ +   LV
Sbjct: 57  LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV 116

Query: 195 MEF-CNGGDLADYLVSKGTLSEDTIRIFLK 223
           +E      DL DY+  KG L E   R F  
Sbjct: 117 LERPLPAQDLFDYITEKGPLGEGPSRCFFG 146

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 16/103 (15%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           +Y    A ++S+G +++  + G  PF         +  ++ L      P   S +   L+
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPF---------ERDQEILEAELHFPAHVSPDCCALI 264

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ------PLAPHPLIPEPHA 99
              L      R S E++   P++Q      PL P    P P A
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLA 307

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 12/101 (11%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
              AIKR  K        QN  +E+     L    H +VV        D H+ +  E+CN
Sbjct: 37  CIYAIKRSKKPLAGSVDEQNALREVYAHAVL--GQHSHVVRYFSAWAEDDHMLIQNEYCN 94

Query: 200 GGDLADYL----VSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG LAD +           E  ++  L   Q+ +   Y H 
Sbjct: 95  GGSLADAISENYRIMSYFKEAELKDLLL--QVGRGLRYIHS 133

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 5/83 (6%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +  KAD++++   V      +      +  Q  +  +  L   P++P   S E  ELL  
Sbjct: 208 HLPKADIFALALTVVCAAGAEPLP--RNGDQWHEIRQGRL---PRIPQVLSQEFTELLKV 262

Query: 65  LLKRNAMDRISFEQLFAHPFLQP 87
           ++  +   R S   L  H  L  
Sbjct: 263 MIHPDPERRPSAMALVKHSVLLS 285

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 74.6 bits (184), Expect = 4e-16
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 12/100 (12%)

Query: 142 QHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
               IK I K       +    EI +LK L    H N++++    E   ++Y+VME C G
Sbjct: 48  LERVIKTINKDRSQVPMEQIEAEIEVLKSL---DHPNIIKIFEVFEDYHNMYIVMETCEG 104

Query: 201 GDLADYLVSK----GTLSEDTIRIFLKLHQMLQ--LYFHD 234
           G+L + +VS       LSE  +   +K  QM+    YFH 
Sbjct: 105 GELLERIVSAQARGKALSEGYVAELMK--QMMNALAYFHS 142

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 18/83 (21%), Positives = 35/83 (42%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
               K D++S G +++  LTG  PF   S  +++Q                + +  +LL 
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK 260

Query: 64  GLLKRNAMDRISFEQLFAHPFLQ 86
            +L ++   R S  Q+  H + +
Sbjct: 261 QMLTKDPERRPSAAQVLHHEWFK 283

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 9/95 (9%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +  A+K + K      +    EI +L  L    H N+++L    E+   + LV+E   GG
Sbjct: 79  KPYALKVLKKT--VDKKIVRTEIGVLLRL---SHPNIIKLKEIFETPTEISLVLELVTGG 133

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           +L D +V KG  SE      +K  Q+L+   Y H+
Sbjct: 134 ELFDRIVEKGYYSERDAADAVK--QILEAVAYLHE 166

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +    K +  K   +     KEI+IL       H N++ L    ES + + ++ EF +G 
Sbjct: 31  KTYMAKFVKVKGTDQ-VLVKKEISILNIA---RHRNILHLHESFESMEELVMIFEFISGL 86

Query: 202 DLADYLVSKG-TLSEDTIRIFLK--------LHQM 227
           D+ + + +    L+E  I  ++         LH  
Sbjct: 87  DIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-------------KESD 188
           ++ AIK+I      K      E+ +L  L   +H+ VV                   +  
Sbjct: 32  RYYAIKKIRHTE-EKLSTILSEVMLLASL---NHQYVVRYYAAWLERRNFVKPMTAVKKK 87

Query: 189 QHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ--LYFHD 234
             +++ ME+C  G L D + S+      D      +  Q+L+   Y H 
Sbjct: 88  STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR--QILEALSYIHS 134

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 3/93 (3%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELLL 63
           Y+ K D+YS+G I F+ +             + K+    ++   P          K+++ 
Sbjct: 208 YNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR 265

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPE 96
            L+  +   R     L    +L       +I E
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKE 298

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VA+K I +      +N  +EI   + L    H N+V       +  H+ ++ME+ +GG
Sbjct: 46  ELVAVKYIERGAAID-ENVQREIINHRSL---RHPNIVRFKEVILTPTHLAIIMEYASGG 101

Query: 202 DLADYLVSKGTLSEDTIRIF 221
           +L + + + G  SED  R F
Sbjct: 102 ELYERICNAGRFSEDEARFF 121

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFI-ANSPPQLKQYYEKNLVLVPKVPVGT--SAELK 59
           +YD   AD++S G  ++  L G  PF     P   ++  ++ L +   +P     S E  
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC 252

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTD 112
            L+  +   +   RIS  ++  H +     P  L+ E + GS      +    
Sbjct: 253 HLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQS 305

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 12/95 (12%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
              A+K++  +         +E+     L       +V L         V + ME   GG
Sbjct: 84  FQCAVKKVRLEVFRV-----EELVACAGL---SSPRIVPLYGAVREGPWVNIFMELLEGG 135

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            L   +   G L ED    +L   Q L+   Y H 
Sbjct: 136 SLGQLIKQMGCLPEDRALYYLG--QALEGLEYLHT 168

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 26/107 (24%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF-----------IANSPPQLKQYYEKNLVLVPKVPVG 53
            DAK D++S   ++   L G  P+           IA+ PP            + ++P  
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPP-----------PIREIPPS 281

Query: 54  TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP----HPLIPE 96
            +    + +   L++  + R S  +L                P   E
Sbjct: 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE 328

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
              A+K I K     T+    EI IL       H N++ L    +  ++VY+V E   GG
Sbjct: 48  MEFAVKIIDKSKRDPTE----EIEILLRY--GQHPNIITLKDVYDDGKYVYVVTELMKGG 101

Query: 202 DLADYLVSKGTLSE-DTIRIFLKLHQMLQLYFHD 234
           +L D ++ +   SE +   +   + + ++ Y H 
Sbjct: 102 ELLDKILRQKFFSEREASAVLFTITKTVE-YLHA 134

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 16/102 (15%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV----------PKVPVG 53
            YDA  D++S+G +++  LTG  PF        ++   +  +              V   
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR--IGSGKFSLSGGYWNSV--- 250

Query: 54  TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
            S   K+L+  +L  +   R++   +  HP++      P   
Sbjct: 251 -SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQ 291

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 71.9 bits (177), Expect = 4e-15
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 142 QHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             +A+K + K  L K        +E+ I   L    H N++ L         VYL++E+ 
Sbjct: 35  FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNILRLYGYFHDATRVYLILEYA 91

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
             G +   L       E     +  + ++     Y H
Sbjct: 92  PLGTVYRELQKLSKFDEQRTATY--ITELANALSYCH 126

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +D K DL+S+G + ++ L GK PF AN+  +    Y++   +    P   +   ++L+  
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFTFPDFVTEGARDLISR 240

Query: 65  LLKRNAMDRISFEQLFAHPFLQ 86
           LLK N   R    ++  HP++ 
Sbjct: 241 LLKHNPSQRPMLREVLEHPWIT 262

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 15/112 (13%)

Query: 142 QHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHC--KESDQHVYLVMEF 197
           + +  K +   ++ +   Q    E+N+L+EL    H N+V         ++  +Y+VME+
Sbjct: 32  KILVWKELDYGSMTEAEKQMLVSEVNLLREL---KHPNIVRYYDRIIDRTNTTLYIVMEY 88

Query: 198 CNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQ--LYFHDFTPWSFVIL 243
           C GGDLA  +      +  L E+ +   +   Q+       H  +     +L
Sbjct: 89  CEGGDLASVITKGTKERQYLDEEFVLRVMT--QLTLALKECHRRSDGGHTVL 138

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
             M Y+ K+D++S+G ++++      PF A S  +L     +      ++P   S EL E
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF--RRIPYRYSDELNE 246

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQP 87
           ++  +L      R S E++  +P +  
Sbjct: 247 IITRMLNLKDYHRPSVEEILENPLILE 273

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 72.4 bits (178), Expect = 5e-15
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 142 QHVAIKRITKKNLAK-----TQNFGK---EINILKELTELHHENVVELLHCKESDQHVYL 193
           + V +K I K+ + +         GK   EI IL  +    H N++++L   E+     L
Sbjct: 50  KEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV---EHANIIKVLDIFENQGFFQL 106

Query: 194 VMEF-CNGGDLADYLVSKGTLSEDTIRIF 221
           VME   +G DL  ++     L E      
Sbjct: 107 VMEKHGSGLDLFAFIDRHPRLDEPLASYI 135

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 18/143 (12%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            Y   + +++S+G  ++  +  + PF            E+ +      P   S EL  L+
Sbjct: 205 PYRGPELEMWSLGVTLYTLVFEENPF---------CELEETVEAAIHPPYLVSKELMSLV 255

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSAD 122
            GLL+     R + E+L   P++                   +   +  +  V+   S +
Sbjct: 256 SGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEE------VFRVNKPESGVLSAASLE 309

Query: 123 VVSTSPP--RPSSLLLSPAPSQH 143
           + + S      +  L       H
Sbjct: 310 MGNRSLSDVAQAQELCGGEGHHH 332

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 72.3 bits (178), Expect = 5e-15
 Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 7/83 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGK---EINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q VA+K I+++ L K+    +   EI+ LK L    H ++++L     +   + +V+E+ 
Sbjct: 35  QKVALKFISRQLLKKSDMHMRVEREISYLKLL---RHPHIIKLYDVITTPTDIVMVIEYA 91

Query: 199 NGGDLADYLVSKGTLSEDTIRIF 221
            GG+L DY+V K  ++ED  R F
Sbjct: 92  -GGELFDYIVEKKRMTEDEGRRF 113

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 12/144 (8%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            Y   + D++S G +++  L G+ PF     P L   ++K    V  +P   S   + L+
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---FKKVNSCVYVMPDFLSPGAQSLI 239

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSAD 122
             ++  + M RI+ +++   P+     P  L P            + S  D  ++    +
Sbjct: 240 RRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPME--------EVQGSYADSRIVSKLGE 291

Query: 123 VVSTSPPRPSSLLLSPAPSQHVAI 146
            +  S       L S   ++    
Sbjct: 292 AMGFSEDYIVEALRSDENNEVKEA 315

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 71.6 bits (175), Expect = 1e-14
 Identities = 16/107 (14%), Positives = 31/107 (28%), Gaps = 7/107 (6%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
                 D +++G  ++       P   ++        E        +P      ++ LL 
Sbjct: 293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG---SEWIFRSCKNIP----QPVRALLE 345

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDS 110
           G L+    DR+   Q    P  + L        P   +    + E  
Sbjct: 346 GFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPTREGG 392

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGK------EINILKELTELHHENVVELLHCKESDQHVYLVM 195
             VAIK + K  ++             E+ +LK+++      V+ LL   E      L++
Sbjct: 69  LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFSGVIRLLDWFERPDSFVLIL 127

Query: 196 EFCNG-GDLADYLVSKGTLSEDTIRIFLK 223
           E      DL D++  +G L E+  R F  
Sbjct: 128 ERPEPVQDLFDFITERGALQEELARSFFW 156

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 17/110 (15%)

Query: 4   KYDA-KADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL--VPKVPVGTSAELKE 60
           +Y    A ++S+G +++  + G  PF                ++          S+E + 
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPF-----------EHDEEIIRGQVFFRQRVSSECQH 272

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDS 110
           L+   L     DR +FE++  HP++Q +       E H     +LSP  S
Sbjct: 273 LIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH---LHSLSPGPS 319

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 69.3 bits (170), Expect = 5e-14
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           +AIK I +++   +Q   +EI + K L    H+N+V+ L     +  + + ME   GG L
Sbjct: 50  IAIKEIPERDSRYSQPLHEEIALHKHL---KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106

Query: 204 ADYLVSKG---TLSEDTIRIFLKLHQMLQ--LYFHD 234
           +  L SK      +E TI  + K  Q+L+   Y HD
Sbjct: 107 SALLRSKWGPLKDNEQTIGFYTK--QILEGLKYLHD 140

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 23/82 (28%), Positives = 36/82 (43%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y   AD++S+G  + +  TGK PF     PQ   +      + P++P   SAE K  +L 
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261

Query: 65  LLKRNAMDRISFEQLFAHPFLQ 86
             + +   R     L    FL+
Sbjct: 262 CFEPDPDKRACANDLLVDEFLK 283

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 69.5 bits (170), Expect = 5e-14
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 142 QHVAIKRITKKNLAKT-----QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
              AIK + K  + +      +    E+ ++K+L   HH N+  L    E +Q++ LVME
Sbjct: 52  AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL---HHPNIARLYEVYEDEQYICLVME 108

Query: 197 FCNGGDLADYLVSKGTLSED 216
            C+GG L D L      S  
Sbjct: 109 LCHGGHLLDKLNVFIDDSTG 128

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 1/84 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK-NLVLVPKVPVGTSAELKELL 62
            Y  K D +S G ++   L G  PF   +            L          S   ++LL
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLL 311

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ 86
             LL RN  +R    +   HP++ 
Sbjct: 312 SNLLNRNVDERFDAMRALQHPWIS 335

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 68.8 bits (169), Expect = 6e-14
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 3/91 (3%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +D K DL+  G + ++ L G  PF + S  +    + + + +  K P   S   K+L+  
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET---HRRIVNVDLKFPPFLSDGSKDLISK 245

Query: 65  LLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
           LL+ +   R+  + +  HP+++  +   L P
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 276

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 142 QHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             +A+K + K  L K        +EI I   L    H N++ + +     + +YL++EF 
Sbjct: 40  FIMALKVLFKSQLEKEGVEHQLRREIEIQSHL---RHPNILRMYNYFHDRKRIYLMLEFA 96

Query: 199 NGGDLADYLVSKGTLSEDTIRIF 221
             G+L   L   G   E     F
Sbjct: 97  PRGELYKELQKHGRFDEQRSATF 119

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 10/98 (10%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           +  A+KR                E+   +++    H   V L    E    +YL  E C 
Sbjct: 83  RLYAVKRSMSPFRGPKDRARKLAEVGSHEKV--GQHPCCVRLEQAWEEGGILYLQTELC- 139

Query: 200 GGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ--LYFHD 234
           G  L  +  + G  L E  +  +L+    L    + H 
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLR--DTLLALAHLHS 175

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 4   KYDAKADLYSVGTIVFQCLTGK-APFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            Y   AD++S+G  + +       P       QL+Q       L P+   G S+EL+ +L
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ-----GYLPPEFTAGLSSELRSVL 285

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ 86
           + +L+ +   R + E L A P L+
Sbjct: 286 VMMLEPDPKLRATAEALLALPVLR 309

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 14/102 (13%)

Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             VA+K++   +L       +  KEI++LK+L   +H NV++       D  + +V+E  
Sbjct: 58  VPVALKKVQIFDLMDAKARADCIKEIDLLKQL---NHPNVIKYYASFIEDNELNIVLELA 114

Query: 199 NGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           + GDL+  +      K  + E T+  +    Q+     + H 
Sbjct: 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFV--QLCSALEHMHS 154

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 15/99 (15%), Positives = 37/99 (37%), Gaps = 1/99 (1%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT-SAELK 59
               Y+ K+D++S+G ++++    ++PF  +         +      P +P    S EL+
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPH 98
           +L+   +  +   R     ++             +   H
Sbjct: 269 QLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHH 307

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 69.3 bits (169), Expect = 7e-14
 Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 9/93 (9%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
                D +++G +++       P   ++        E        +P      ++ LL G
Sbjct: 290 MTFSFDAWALGLVIYWIWCADLPITKDAALGG---SEWIFRSCKNIP----QPVRALLEG 342

Query: 65  LLKRNAMDRISFEQLFAHPFLQPLAPH--PLIP 95
            L+    DR+   Q    P  + L       +P
Sbjct: 343 FLRYPKEDRLLPLQAMETPEYEQLRTELSAALP 375

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 68.9 bits (168), Expect = 1e-13
 Identities = 11/104 (10%), Positives = 29/104 (27%), Gaps = 6/104 (5%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPV------GTS 55
           +  +    + + +G  +++      PF   +P     +   +L +     +         
Sbjct: 267 TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLP 326

Query: 56  AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHA 99
             +K L+   L  +   R+   +    P    L           
Sbjct: 327 DFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLSTG 370

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 29/113 (25%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC----------------K 185
           +   IKR+   N    +   +E+  L +L    H N+V    C                +
Sbjct: 37  KTYVIKRVKYNN----EKAEREVKALAKL---DHVNIVHYNGCWDGFDYDPETSSKNSSR 89

Query: 186 ESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQ--LYFHD 234
              + +++ MEFC+ G L  ++  +    L +       +  Q+ +   Y H 
Sbjct: 90  SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE--QITKGVDYIHS 140

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKEL 61
           S  Y  + DLY++G I+ + L            +  +++    +    +      + K L
Sbjct: 195 SQDYGKEVDLYALGLILAELLHVCDT-----AFETSKFFTD--LRDGIISDIFDKKEKTL 247

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQPLAP 90
           L  LL +   DR +  ++     +   +P
Sbjct: 248 LQKLLSKKPEDRPNTSEILRTLTVWKKSP 276

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 20/111 (18%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQH--------VY 192
            +  A+KR+      K +   +E+  +K+L    H N+V+        +           
Sbjct: 53  GREYALKRLLSNEEEKNRAIIQEVCFMKKL--SGHPNIVQFCSAASIGKEESDTGQAEFL 110

Query: 193 LVMEFCNGGDLADYLV---SKGTLSEDTI-RIFLKLHQMLQ--LYFHDFTP 237
           L+ E C G  + ++L    S+G LS DT+ +IF   +Q  +   + H   P
Sbjct: 111 LLTELCKGQLV-EFLKKMESRGPLSCDTVLKIF---YQTCRAVQHMHRQKP 157

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 7/94 (7%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLL 63
              K D++++G I++     + PF   +  + +   Y      +P            L+ 
Sbjct: 230 IGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS-----IPPHDT-QYTVFHSLIR 283

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEP 97
            +L+ N  +R+S  ++         A +     P
Sbjct: 284 AMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSP 317

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 66.7 bits (163), Expect = 4e-13
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 20/97 (20%)

Query: 142 QHVAIKRITKKNLAKTQNFGK-----------------EINILKELTELHHENVVELLHC 184
           +  A+K+  K  L K ++F K                 E+ I+ ++    +E  +     
Sbjct: 55  KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI---KNEYCLTCEGI 111

Query: 185 KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
             +   VY++ E+     +  +      L ++     
Sbjct: 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 17/110 (15%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF------------IANSP---PQLKQYYEKNLVLVPK 49
             AK D++S+G  ++       PF            I       P  + ++   L     
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKS 288

Query: 50  VPVGT--SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEP 97
                  S E  + L   L++N  +RI+ E    H +L       L    
Sbjct: 289 TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFS 338

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 66.2 bits (162), Expect = 5e-13
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 13/104 (12%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHC----KESDQHVYLVM 195
             VA   +  + L K+  Q F +E  +LK L    H N+V          +  + + LV 
Sbjct: 52  VEVAWCELQDRKLTKSERQRFKEEAEMLKGL---QHPNIVRFYDSWESTVKGKKCIVLVT 108

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHDFTP 237
           E    G L  YL     +    +R + +  Q+L+   + H  TP
Sbjct: 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCR--QILKGLQFLHTRTP 150

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEK--NLVLVPKVPVGTSAELKEL 61
           KYD   D+Y+ G  + +  T + P+         Q Y +  + V           E+KE+
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYRRVTSGVKPASFDKVAIPEVKEI 262

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQ 86
           + G +++N  +R S + L  H F Q
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQ 287

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 66.1 bits (162), Expect = 5e-13
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGK----EINILKELTELHHENVVELLH--CKESDQHVYLVM 195
              A+K + KK L +  N       EI +L+ L    H+NV++L+     E  Q +Y+VM
Sbjct: 31  CRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL---RHKNVIQLVDVLYNEEKQKMYMVM 87

Query: 196 EFCNGG--DLADYLVSKGTLSEDTIRIF 221
           E+C  G  ++ D +  +          +
Sbjct: 88  EYCVCGMQEMLDSVP-EKRFPVCQAHGY 114

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 4   KYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            +   K D++S G  ++   TG  PF  ++  +L   +E        +P      L +LL
Sbjct: 188 TFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL---FENIGKGSYAIPGDCGPPLSDLL 244

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIP 118
            G+L+     R S  Q+  H + +   P    P P    P +   +D      V+P
Sbjct: 245 KGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVP---IPPSPDTKDRWRSMTVVP 297

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
              A K I  K+  + +++  EI IL       H  +V+LL     D  +++++EFC GG
Sbjct: 45  ALAAAKVIETKSEEELEDYIVEIEILATC---DHPYIVKLLGAYYHDGKLWIMIEFCPGG 101

Query: 202 DLAD-YLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
            +    L     L+E  I++     QML+   + H
Sbjct: 102 AVDAIMLELDRGLTEPQIQVV--CRQMLEALNFLH 134

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 19/109 (17%)

Query: 142 QHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHC------------KESD 188
            + AIKRI   N     +   +E+  L +L    H  +V   +                 
Sbjct: 31  CNYAIKRIRLPNRELAREKVMREVKALAKL---EHPGIVRYFNAWLEKNTTEKLQPSSPK 87

Query: 189 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK-LHQMLQ--LYFHD 234
            ++Y+ M+ C   +L D++  + T+ E    + L    Q+ +   + H 
Sbjct: 88  VYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS 136

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 18/92 (19%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------VPKVPVGT 54
              Y  K D++S+G I+F+ L    PF            E+   L        P +    
Sbjct: 204 GNSYSHKVDIFSLGLILFELLY---PFSTQM--------ERVRTLTDVRNLKFPPLFTQK 252

Query: 55  SAELKELLLGLLKRNAMDRISFEQLFAHPFLQ 86
                 ++  +L  + M+R     +  +   +
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 63.9 bits (156), Expect = 3e-12
 Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE----SDQHVYLVMEF 197
           +  A+K +     A+     +E+ +          ++V ++   E      + + +VME 
Sbjct: 44  EKFALKMLQDCPKAR-----REVELHWRA--SQCPHIVRIVDVYENLYAGRKCLLIVMEC 96

Query: 198 CNGGDLADYLVSKG 211
            +GG+L   +  +G
Sbjct: 97  LDGGELFSRIQDRG 110

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 17/103 (16%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT--------- 54
           KYD   D++S+G I++  L G  PF +N    +         +  ++ +G          
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG------MKTRIRMGQYEFPNPEWS 227

Query: 55  --SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
             S E+K L+  LLK     R++  +   HP++      P  P
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 63.5 bits (154), Expect = 6e-12
 Identities = 15/100 (15%), Positives = 29/100 (29%), Gaps = 12/100 (12%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q   +K     N      F     +++ L        ++            LV E  + G
Sbjct: 96  QKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYG 152

Query: 202 DLADYLVSKG-----TLSEDTIRIFLKLHQMLQL--YFHD 234
            L + +          + +  +  F    +ML +    HD
Sbjct: 153 TLLNAINLYKNTPEKVMPQGLVISF--AMRMLYMIEQVHD 190

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 10/85 (11%), Positives = 31/85 (36%), Gaps = 15/85 (17%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQ------LKQYYEKN---------LVLVPK 49
           ++ + D + V   V+  L G    + N   +       ++    +         L +   
Sbjct: 262 WNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDC 321

Query: 50  VPVGTSAELKELLLGLLKRNAMDRI 74
             + +   L++ L  + +++  ++I
Sbjct: 322 HHLPSLDLLRQKLKKVFQQHYTNKI 346

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 63.2 bits (154), Expect = 7e-12
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 8/95 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VA+K +  +   + +    E+ I+++     H NVVE+       + ++++MEF  GG
Sbjct: 71  RQVAVKMMDLRKQQRRELLFNEVVIMRDY---QHFNVVEMYKSYLVGEELWVLMEFLQGG 127

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            L D +VS+  L+E+ I    +   +LQ   Y H 
Sbjct: 128 ALTD-IVSQVRLNEEQIATVCE--AVLQALAYLHA 159

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 28/106 (26%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF-----------IA-NSPPQLKQYYEKNLVLVPKVPV 52
           Y  + D++S+G +V + + G+ P+           +  + PP+LK               
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKN------------SH 265

Query: 53  GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH----PLI 94
             S  L++ L  +L R+  +R + ++L  HPFL          PLI
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLI 311

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 62.7 bits (153), Expect = 9e-12
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 8/94 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VAI+++  +   K +    EI +++E     + N+V  L        +++VME+  GG
Sbjct: 46  QEVAIRQMNLQQQPKKELIINEILVMREN---KNPNIVNYLDSYLVGDELWVVMEYLAGG 102

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
            L D +V++  + E  I    +  + LQ   + H
Sbjct: 103 SLTD-VVTETCMDEGQIAAVCR--ECLQALEFLH 133

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 28/106 (26%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF-----------IA-NSPPQLKQYYEKNLVLVPKVPV 52
           Y  K D++S+G +  + + G+ P+           IA N  P+L+             P 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN------------PE 240

Query: 53  GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH----PLI 94
             SA  ++ L   L+ +   R S ++L  H FL+   P     PLI
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLI 286

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 14/105 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VAIK+I  ++    + F  E+  L  +   +H N+V+L         V LVME+  GG
Sbjct: 32  KDVAIKQIESESE--RKAFIVELRQLSRV---NHPNIVKLYGA--CLNPVCLVMEYAEGG 84

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQL-----YFHDFTPWSFV 241
            L + L     L   T    +     LQ      Y H   P + +
Sbjct: 85  SLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVAYLHSMQPKALI 127

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 12/124 (9%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPF--IANSPPQLKQYYEKNLVLVPKVPVGTSAEL 58
               Y  K D++S G I+++ +T + PF  I     ++           P +       +
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--TRPPLIKNLPKPI 233

Query: 59  KELLLGLLKRNAMDRISFEQLFAH--------PFLQPLAPHPLIPEPHAGSPVTLSPEDS 110
           + L+     ++   R S E++           P       +P       G    + P   
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVEPYVD 293

Query: 111 TDDF 114
             +F
Sbjct: 294 FAEF 297

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 22/103 (21%)

Query: 142 QHVAIKRITKKNLAKTQNFG--------KEINILKELTELHHENVVELLHCKESDQHVYL 193
           + VAIKRI      + ++          +E+++LKEL    H N++EL      +  ++L
Sbjct: 60  ETVAIKRI------RLEHEEEGVPGTAIREVSLLKEL---QHRNIIELKSVIHHNHRLHL 110

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           + E+    DL  Y+     +S   I+ F  L+Q++    + H 
Sbjct: 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSF--LYQLINGVNFCHS 150

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 11/74 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQH----VYLVMEF 197
           Q  A+K +     A+     +E++   +       ++V +L   E+  H    + ++ME 
Sbjct: 55  QKCALKLLYDSPKAR-----QEVDHHWQA--SGGPHIVCILDVYENMHHGKRCLLIIMEC 107

Query: 198 CNGGDLADYLVSKG 211
             GG+L   +  +G
Sbjct: 108 MEGGELFSRIQERG 121

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 17/103 (16%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT--------- 54
           KYD   D++S+G I++  L G  PF +N+   +         +  ++ +G          
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP------GMKRRIRLGQYGFPNPEWS 258

Query: 55  --SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
             S + K+L+  LLK +  +R++  Q   HP++      P  P
Sbjct: 259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE----SDQHVYLVMEF 197
           +  A+K +     A+     +E+ +          ++V ++   E      + + +VME 
Sbjct: 88  EKFALKMLQDCPKAR-----REVELHWRA--SQCPHIVRIVDVYENLYAGRKCLLIVMEC 140

Query: 198 CNGGDLADYLVSKG 211
            +GG+L   +  +G
Sbjct: 141 LDGGELFSRIQDRG 154

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 17/103 (16%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGT--------- 54
           KYD   D++S+G I++  L G  PF +N    +         +  ++ +G          
Sbjct: 239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG------MKTRIRMGQYEFPNPEWS 292

Query: 55  --SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
             S E+K L+  LLK     R++  +   HP++      P  P
Sbjct: 293 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 335

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 60.8 bits (148), Expect = 4e-11
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 9/95 (9%)

Query: 142 QHVAIKRIT-KKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VAIK I  ++   + ++  +EI +L +        V +       D  ++++ME+  G
Sbjct: 48  KVVAIKIIDLEEAEDEIEDIQQEITVLSQC---DSPYVTKYYGSYLKDTKLWIIMEYLGG 104

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           G   D L+  G L E  I   L+  ++L+   Y H
Sbjct: 105 GSALD-LLEPGPLDETQIATILR--EILKGLDYLH 136

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 26/97 (26%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF-----------IA-NSPPQLKQYYEKNLVLVPKVPV 52
           YD+KAD++S+G    +   G+ P            I  N+PP L+  Y            
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------ 243

Query: 53  GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA 89
             S  LKE +   L +    R + ++L  H F+   A
Sbjct: 244 --SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 278

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%)

Query: 142 QHVAIKRITKKN----LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
           Q VAIK+  +      + K     +EI +LK+L    H N+V LL      + ++LV E+
Sbjct: 29  QIVAIKKFLESEDDPVIKKIAL--REIRMLKQL---KHPNLVNLLEVFRRKRRLHLVFEY 83

Query: 198 CNGGDLADYL-VSKGTLSEDTIRIFLKLHQMLQ 229
           C+   +   L   +  + E  ++      Q LQ
Sbjct: 84  CD-HTVLHELDRYQRGVPEHLVKSI--TWQTLQ 113

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 60.4 bits (147), Expect = 6e-11
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 13/105 (12%)

Query: 135 LLSPAPSQHVAIKRITKKN--LAKTQNFGKEINILKELTELHHENVVELL-HCKESDQHV 191
           +   A  + VA+K + K+    ++ +    E+ IL  +   HH NVV LL  C +    +
Sbjct: 51  IDKTATCRTVAVKML-KEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPL 107

Query: 192 YLVMEFCNGGDLADYL-------VSKGTLSEDTIRIFLKLHQMLQ 229
            +++EFC  G+L+ YL       V      ED  + FL L  ++ 
Sbjct: 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 32/108 (29%)

Query: 142 QHVAIKRITKKNLAKTQNFGK--------------------------EINILKELTELHH 175
            + A+K ++KK L +   F +                          EI ILK+L    H
Sbjct: 39  TYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL---DH 95

Query: 176 ENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 221
            NVV+L+   +  ++ H+Y+V E  N G + +   +   LSED  R +
Sbjct: 96  PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQARFY 142

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 51.1 bits (123), Expect = 8e-08
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 5   YD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP--VGTSAELKEL 61
           +     D++++G  ++  + G+ PF+      L   + K      + P     + +LK+L
Sbjct: 216 FSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL---HSKIKSQALEFPDQPDIAEDLKDL 272

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQ 86
           +  +L +N   RI   ++  HP++ 
Sbjct: 273 ITRMLDKNPESRIVVPEIKLHPWVT 297

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 60.8 bits (148), Expect = 6e-11
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 13/87 (14%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGD 202
           VA+K I  KN A  Q F  E +++ +L    H N+V+LL    E    +Y+V E+   G 
Sbjct: 219 VAVKCI--KNDATAQAFLAEASVMTQL---RHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           L DYL S+G       R  L    +L+
Sbjct: 274 LVDYLRSRG-------RSVLGGDCLLK 293

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 60.4 bits (147), Expect = 6e-11
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHVY 192
           +         AIKR+ K+  +K    +F  E+ +L +L   HH N++ LL   E   ++Y
Sbjct: 46  IKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLY 102

Query: 193 LVMEFCNGGDLADYL 207
           L +E+   G+L D+L
Sbjct: 103 LAIEYAPHGNLLDFL 117

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 59.9 bits (146), Expect = 9e-11
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 19/108 (17%)

Query: 142 QHVAIKRITKKNLAKTQNFG------KEINILKELTELHHENVVELL---HCKESDQH-- 190
             VA+K + +         G      +E+ +L+ L    H NVV L+       +D+   
Sbjct: 35  HFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93

Query: 191 VYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKLHQMLQ--LYFHD 234
           V LV E  +  DL  YL       L  +TI+    + Q L+   + H 
Sbjct: 94  VTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL--MRQFLRGLDFLHA 138

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 23/104 (22%)

Query: 142 QHVAIKRITKKNLAKTQNFG--------KEINILKELTELHHENVVELLHCKESDQHVYL 193
           + VA+KR+      +  +          +EI +LKEL    H+N+V L     SD+ + L
Sbjct: 28  EIVALKRV------RLDDDDEGVPSSALREICLLKEL---KHKNIVRLHDVLHSDKKLTL 78

Query: 194 VMEFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ--LYFHD 234
           V EFC+  DL  Y  S    L  + ++ F  L Q+L+   + H 
Sbjct: 79  VFEFCD-QDLKKYFDSCNGDLDPEIVKSF--LFQLLKGLGFCHS 119

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 24/105 (22%)

Query: 142 QHVAIKRITKKNLAKTQNFG--------KEINILKELTELHHENVVELLHCKESDQHVYL 193
           + VA+K+I      +             +EI++LKEL   +H N+V+LL    ++  +YL
Sbjct: 29  EVVALKKI------RLDTETEGVPSTAIREISLLKEL---NHPNIVKLLDVIHTENKLYL 79

Query: 194 VMEFCNGGDLADYLVSKGT--LSEDTIRIFLKLHQMLQ--LYFHD 234
           V EF +  DL  ++ +     +    I+ +  L Q+LQ   + H 
Sbjct: 80  VFEFLH-QDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHS 121

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 12/81 (14%)

Query: 163 EINILKELTELHHENVVELL-----HCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSE 215
           E+ +L+ L    H NVV L         + +  + LV E  +  DL  YL  V +  +  
Sbjct: 61  EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPT 119

Query: 216 DTIRIFLKLHQMLQ--LYFHD 234
           +TI+    + Q+L+   + H 
Sbjct: 120 ETIKDM--MFQLLRGLDFLHS 138

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 18/109 (16%)

Query: 142 QHVAIKRITKKNLAKT----QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
             VA+K              +N  +E  +   L    H N++ L      + ++ LVMEF
Sbjct: 31  DEVAVKAARHDPDEDISQTIENVRQEAKLFAML---KHPNIIALRGVCLKEPNLCLVMEF 87

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQL-----YFHDFTPWSFV 241
             GG L   L  K       I   + ++  +Q+     Y HD      +
Sbjct: 88  ARGGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPII 130

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 142 QHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELL-HCKESDQHVYLVMEFC 198
             VA+K + +++    +   F +E+ I+K L    H N+V  +    +   ++ +V E+ 
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRL---RHPNIVLFMGAVTQPP-NLSIVTEYL 116

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKL 224
           + G L   L   G   +   R  L +
Sbjct: 117 SRGSLYRLLHKSGAREQLDERRRLSM 142

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 6/96 (6%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELL 62
             + K+D+YS G I+++  T + P+   +P Q +     K      ++P   + ++  ++
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC--KRLEIPRNLNPQVAAII 272

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPH 98
            G        R SF  +     L+PL    + P P+
Sbjct: 273 EGCWTNEPWKRPSFATIMDL--LRPLIKSAV-PPPN 305

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 23/104 (22%)

Query: 142 QHVAIKRITKKNLAKTQNFG--------KEINILKELTELHHENVVELLHCKESDQHVYL 193
           +  A+K+I      + +           +EI+ILKEL    H N+V+L     + + + L
Sbjct: 27  ETFALKKI------RLEKEDEGIPSTTIREISILKEL---KHSNIVKLYDVIHTKKRLVL 77

Query: 194 VMEFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ--LYFHD 234
           V E  +  DL   L      L   T + F  L Q+L    Y HD
Sbjct: 78  VFEHLD-QDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCHD 118

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y    D +S+G   ++ L G+ P+   S    K+        V   P   S E+  LL  
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKK 253

Query: 65  LLKRNAMDRI-SFEQLFAHPFLQPL 88
           LL+ N   R      +   P++  +
Sbjct: 254 LLEPNPDQRFSQLSDVQNFPYMNDI 278

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 145 AIKRITKKNLAKTQNFGKEI-NILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           A+K + K+   +      E+ N+ KE   +  L H  +V L +  + ++ +++V++   G
Sbjct: 44  AMKYMNKQKCVER----NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99

Query: 201 GDLADYLVSKGTLSEDTIRIFL 222
           GDL  +L       E+T+++F+
Sbjct: 100 GDLRYHLQQNVHFKEETVKLFI 121

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFG------KEINILKELTELHHENVVELLHCKESDQHVYLVM 195
           Q VAIK+I   + ++ ++ G      +EI +L+EL    H N++ LL       ++ LV 
Sbjct: 36  QIVAIKKIKLGHRSEAKD-GINRTALREIKLLQEL---SHPNIIGLLDAFGHKSNISLVF 91

Query: 196 EFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ 229
           +F    DL   +      L+   I+ +  +   LQ
Sbjct: 92  DFME-TDLEVIIKDNSLVLTPSHIKAY--MLMTLQ 123

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 59.5 bits (145), Expect = 1e-10
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 142 QHVAIKRITKKNLAKTQNFG--KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VAIK+  + +  K       +EI +LK+L    HEN+V LL   +  +  YLV EF +
Sbjct: 51  RIVAIKKFLESDDDKMVKKIAMREIKLLKQL---RHENLVNLLEVCKKKKRWYLVFEFVD 107

Query: 200 GGDLADYL-VSKGTLSEDTIRIFLKLHQMLQ 229
              + D L +    L    ++ +  L Q++ 
Sbjct: 108 -HTILDDLELFPNGLDYQVVQKY--LFQIIN 135

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 140 PSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
            S  VA+K + K++  + + F KE  ++KE+    H N+V+LL     +   Y++ EF  
Sbjct: 244 YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEI---KHPNLVQLLGVCTREPPFYIITEFMT 299

Query: 200 GGDLADYL 207
            G+L DYL
Sbjct: 300 YGNLLDYL 307

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 23/104 (22%)

Query: 142 QHVAIKRITKKNLAKTQNFG--------KEINILKELTELHHENVVELLHCKESDQHVYL 193
           + VA+KRI      +             +EI++LKEL   HH N+V L+    S++ + L
Sbjct: 46  RIVALKRI------RLDAEDEGIPSTAIREISLLKEL---HHPNIVSLIDVIHSERCLTL 96

Query: 194 VMEFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQ--LYFHD 234
           V EF    DL   L    T L +  I+I+  L+Q+L+   + H 
Sbjct: 97  VFEFME-KDLKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQ 137

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGD 202
           VA+K    KN A  Q F  E +++ +L    H N+V+LL    E    +Y+V E+   G 
Sbjct: 47  VAVK--CIKNDATAQAFLAEASVMTQL---RHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           L DYL S+G       R  L    +L+
Sbjct: 102 LVDYLRSRG-------RSVLGGDCLLK 121

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 58.8 bits (142), Expect = 3e-10
 Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 21/101 (20%)

Query: 142 QHVAIKRITKKNLAKTQNFG-----KEINILKELTELHHENVVELLHCKESDQHVYLVME 196
           ++V ++RI   NL    N        E+++ K     +H N+V       +D  +++V  
Sbjct: 53  EYVTVRRI---NLEACSNEMVTFLQGELHVSKLF---NHPNIVPYRATFIADNELWVVTS 106

Query: 197 FCNGGDLADYLVS--KGTLSEDTIRIFLK--------LHQM 227
           F   G   D + +     ++E  I   L+        +H M
Sbjct: 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM 147

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 39.1 bits (91), Expect = 9e-04
 Identities = 24/131 (18%), Positives = 35/131 (26%), Gaps = 43/131 (32%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF------------IANSPPQLKQYYEKNLVLVPKVPV 52
           YDAK+D+YSVG    +   G  PF            +  + P L          +   P 
Sbjct: 214 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPS 273

Query: 53  GT-------------------------------SAELKELLLGLLKRNAMDRISFEQLFA 81
            +                               S      +   L+RN   R S   L  
Sbjct: 274 RSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333

Query: 82  HPFLQPLAPHP 92
           H F + +    
Sbjct: 334 HSFFKQIKRRA 344

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 15/105 (14%)

Query: 142 QHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHC--KESDQHVYLVMEF 197
             + +K +  ++    K+++F +E   L+      H NV+ +L         H  L+  +
Sbjct: 34  NDIVVKVLKVRDWSTRKSRDFNEECPRLRIF---SHPNVLPVLGACQSPPAPHPTLITHW 90

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQL-----YFHDFTP 237
              G L + L        D  +    +   L +     + H   P
Sbjct: 91  MPYGSLYNVLHEGTNFVVDQSQA---VKFALDMARGMAFLHTLEP 132

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + + +K + + +    + F KE+ +++ L    H NV++ +     D+ +  + E+  GG
Sbjct: 36  EVMVMKELIRFDEETQRTFLKEVKVMRCL---EHPNVLKFIGVLYKDKRLNFITEYIKGG 92

Query: 202 DLADYLVSKG 211
            L   + S  
Sbjct: 93  TLRGIIKSMD 102

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 140 PSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
            S  VA+K + K++  + + F KE  ++KE+    H N+V+LL     +   Y++ EF  
Sbjct: 37  YSLTVAVKTL-KEDTMEVEEFLKEAAVMKEI---KHPNLVQLLGVCTREPPFYIITEFMT 92

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
            G+L DYL           R  +    +L 
Sbjct: 93  YGNLLDYLRECN-------RQEVSAVVLLY 115

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 140 PSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
            S  VAIK++ +    K     +E+ I++ +    H NVV+L         K+ +  + L
Sbjct: 63  ESDEVAIKKVLQDKRFK----NRELQIMRIV---KHPNVVDLKAFFYSNGDKKDEVFLNL 115

Query: 194 VMEFCNGGDL----ADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           V+E+     +      Y   K T+    I+++  ++Q+L+   Y H
Sbjct: 116 VLEYV-PETVYRASRHYAKLKQTMPMLLIKLY--MYQLLRSLAYIH 158

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 57.8 bits (140), Expect = 4e-10
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 10/95 (10%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VAIK++  ++    Q   KEI+I+++       +VV+       +  +++VME+C  G
Sbjct: 55  QIVAIKQVPVES--DLQEIIKEISIMQQC---DSPHVVKYYGSYFKNTDLWIVMEYCGAG 109

Query: 202 DLAD-YLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
            ++D   +   TL+ED I   L+    L+   Y H
Sbjct: 110 SVSDIIRLRNKTLTEDEIATILQ--STLKGLEYLH 142

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 137 SPAPSQHVAIKRITKK-NLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
            P  +  VA+K +          +   E+ ++K +    H+N++ LL     D  +Y+++
Sbjct: 63  KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIV 120

Query: 196 EFCNGGDLADYLVSKGTLSED 216
           E+ + G+L +YL ++     +
Sbjct: 121 EYASKGNLREYLRARRPPGME 141

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 142 QHVAIKRI---TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           + VAIK++    K++  K Q+  KE+  L++L    H N ++   C   +   +LVME+C
Sbjct: 80  EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL---RHPNTIQYRGCYLREHTAWLVMEYC 136

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
            G       V K  L E  I      H  LQ   Y H
Sbjct: 137 LGSASDLLEVHKKPLQEVEIAAV--THGALQGLAYLH 171

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)

Query: 163 EINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIF 221
           E+++LK+L    H N+V L     +++ + LV E+ +  DL  YL   G  ++   +++F
Sbjct: 50  EVSLLKDL---KHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLF 105

Query: 222 LKLHQMLQ--LYFHD 234
             L Q+L+   Y H 
Sbjct: 106 --LFQLLRGLAYCHR 118

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 137 SPAPSQHVAIKRITKK-NLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
            P  +  VA+K +          +   E+ ++K +    H+N++ LL     D  +Y+++
Sbjct: 109 KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIV 166

Query: 196 EFCNGGDLADYLVSKGTLSED 216
           E+ + G+L +YL ++     +
Sbjct: 167 EYASKGNLREYLRARRPPGME 187

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 57.3 bits (139), Expect = 6e-10
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHV 191
           ++   P   VAIK  T    A  +    F  E +++KE    +  +VV LL      Q  
Sbjct: 49  VVKDEPETRVAIK--TVNEAASMRERIEFLNEASVMKEF---NCHHVVRLLGVVSQGQPT 103

Query: 192 YLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKLHQMLQ 229
            ++ME    GDL  YL   +  ++ + +     L +M+Q
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 56.8 bits (138), Expect = 6e-10
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VA+K I K+       F +E   + +L    H  +V+       +  +Y+V E+ + G L
Sbjct: 35  VAVKMI-KEGSMSEDEFFQEAQTMMKL---SHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90

Query: 204 ADYLVSKG 211
            +YL S G
Sbjct: 91  LNYLRSHG 98

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 56.9 bits (138), Expect = 7e-10
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 23/109 (21%)

Query: 142 QHVAIKRITKKNL-------AKTQNFGKEINILKELTELHHENVVELL-HCKESDQHVYL 193
             VAIK +   +         K Q F +E+ I+  L   +H N+V+L            +
Sbjct: 45  SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL---NHPNIVKLYGLMHNP---PRM 98

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQL-----YFHDFTP 237
           VMEF   GDL   L+ K       I+  +KL  ML +     Y  +  P
Sbjct: 99  VMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQNP 143

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY---EKNLVLVPKVPVGTSAEL 58
              Y  KAD YS   I++  LTG+ PF   S  ++K      E+   L P +P      L
Sbjct: 202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG--LRPTIPEDCPPRL 259

Query: 59  KELLLGLLKRNAMDRISFEQL 79
           + ++      +   R  F  +
Sbjct: 260 RNVIELCWSGDPKKRPHFSYI 280

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 56.9 bits (138), Expect = 7e-10
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 136 LSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC--KESDQHVYL 193
           L     + VA+K++        ++F +EI ILK L    H+N+V+          +++ L
Sbjct: 34  LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL---QHDNIVKYKGVCYSAGRRNLKL 90

Query: 194 VMEFCNGGDLADYL 207
           +ME+   G L DYL
Sbjct: 91  IMEYLPYGSLRDYL 104

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHV 191
           L        VA+K    K+ A          E+ I+  L    HEN+V LL        V
Sbjct: 70  LGKEDAVLKVAVK--MLKSTAHADEKEALMSELKIMSHLG--QHENIVNLLGACTHGGPV 125

Query: 192 YLVMEFCNGGDLADYLVSKGTLSED 216
            ++ E+C  GDL ++L  K  + E 
Sbjct: 126 LVITEYCCYGDLLNFLRRKSRVLET 150

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 56.9 bits (138), Expect = 8e-10
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 135 LLSPAPSQHVAIKRITKK-NLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL 193
           L+    +  VA+K +    +L + +    E+ +L  L   +H N+V LL          +
Sbjct: 47  LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLV 104

Query: 194 VMEFCNGGDLADYL 207
           + E+C  GDL ++L
Sbjct: 105 ITEYCCYGDLLNFL 118

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 136 LSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC--KESDQHVYL 193
           L     + VA+K++        ++F +EI ILK L    H+N+V+          +++ L
Sbjct: 65  LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL---QHDNIVKYKGVCYSAGRRNLKL 121

Query: 194 VMEFCNGGDLADYL 207
           +ME+   G L DYL
Sbjct: 122 IMEYLPYGSLRDYL 135

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 140 PSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
            +  VA+K   ++ L       F +E  ILK+     H N+V L+      Q +Y+VME 
Sbjct: 138 DNTLVAVKSC-RETLPPDLKAKFLQEARILKQY---SHPNIVRLIGVCTQKQPIYIVMEL 193

Query: 198 CNGGDLADYLVSKG 211
             GGD   +L ++G
Sbjct: 194 VQGGDFLTFLRTEG 207

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 135 LLSPAPSQHVAIKRITKKN--LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVY 192
           +     S  VA+K + K+    ++ +    E+ ++ +L    HEN+V LL        +Y
Sbjct: 69  ISKTGVSIQVAVKML-KEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIY 125

Query: 193 LVMEFCNGGDLADYL 207
           L+ E+C  GDL +YL
Sbjct: 126 LIFEYCCYGDLLNYL 140

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 22/104 (21%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYLVM 195
           + VAIK++      + +N  +E+ I+++L    H N+V L +       K+ + ++ LV+
Sbjct: 80  ELVAIKKV--LQDKRFKN--RELQIMRKL---DHCNIVRLRYFFYSSGEKKDEVYLNLVL 132

Query: 196 EFCNGGDL----ADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           ++     +      Y  +K TL    ++++  ++Q+ +   Y H
Sbjct: 133 DYV-PETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIH 173

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV 194
           LL       VA+K + + + +  Q+F +E  +L  L    H+++V         + + +V
Sbjct: 65  LLPEQDKMLVAVKALKEASESARQDFQREAELLTML---QHQHIVRFFGVCTEGRPLLMV 121

Query: 195 MEFCNGGDLADYLVS------KGTLSEDTIRIFLKLHQMLQ 229
            E+   GDL  +L S           ED     L L Q+L 
Sbjct: 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 137 SPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYL 193
            P     VA+K    K+ A  +   +   E+ ++K +    H+N++ LL     D  +Y+
Sbjct: 97  KPNRVTKVAVK--MLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYV 152

Query: 194 VMEFCNGGDLADYLVSKGTLSED 216
           ++E+ + G+L +YL ++     +
Sbjct: 153 IVEYASKGNLREYLQARRPPGLE 175

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 56.4 bits (137), Expect = 1e-09
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 14/80 (17%)

Query: 163 EINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL------VSKGTLSED 216
           EI+++KEL    HEN+V L     ++  + LV EF +  DL  Y+       +   L  +
Sbjct: 53  EISLMKEL---KHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELN 108

Query: 217 TIRIFLKLHQMLQ--LYFHD 234
            ++ F    Q+LQ   + H+
Sbjct: 109 LVKYF--QWQLLQGLAFCHE 126

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 142 QHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELL-HCKESDQHVYLVMEFC 198
             VAI+ I  +     + + F +E+   ++     HENVV  +  C     H+ ++   C
Sbjct: 56  GEVAIRLIDIERDNEDQLKAFKREVMAYRQT---RHENVVLFMGACMSPP-HLAIITSLC 111

Query: 199 NGGDLADYL-VSKGTLSEDTIRIF 221
            G  L   +  +K  L  +  R  
Sbjct: 112 KGRTLYSVVRDAKIVLDVNKTRQI 135

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +   +D++++GTI ++    + PF       +       +       +G   E+ ++LL 
Sbjct: 220 FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM-KPNLSQIGMGKEISDILLF 278

Query: 65  LLKRNAMDRISFEQL 79
                  +R +F +L
Sbjct: 279 CWAFEQEERPTFTKL 293

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VAIK I ++     ++F +E  ++ +L    H  +V+L         + LV EF   G L
Sbjct: 35  VAIKTI-REGAMSEEDFIEEAEVMMKL---SHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90

Query: 204 ADYL 207
           +DYL
Sbjct: 91  SDYL 94

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 19/103 (18%)

Query: 142 QHVAIKRITKKNLAKTQNFGK----EINILKELTELHHENVVELLH-----CKESDQHVY 192
           + VAIK+I    + +     K    EI IL  L   +H++VV++L        E    +Y
Sbjct: 79  RVVAIKKIL--RVFEDLIDCKRILREIAILNRL---NHDHVVKVLDIVIPKDVEKFDELY 133

Query: 193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           +V+E     D      +   L+E  I+    L+ +L    Y H
Sbjct: 134 VVLEIA-DSDFKKLFRTPVYLTELHIKTL--LYNLLVGVKYVH 173

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 135 LLSPAPSQHVAIKRITKKN--LAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVY 192
           L   A    VA+K + K+N   ++ ++   E N+LK++   +H +V++L      D  + 
Sbjct: 47  LKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQV---NHPHVIKLYGACSQDGPLL 102

Query: 193 LVMEFCNGGDLADYL 207
           L++E+   G L  +L
Sbjct: 103 LIVEYAKYGSLRGFL 117

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 22/106 (20%)

Query: 142 QHVAIKRITKKNLAKTQN----FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
           + VAIKRI   NL K Q       KEI  + +    HH N+V           ++LVM+ 
Sbjct: 41  EKVAIKRI---NLEKCQTSMDELLKEIQAMSQC---HHPNIVSYYTSFVVKDELWLVMKL 94

Query: 198 CNGGDLADYL--------VSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
            +GG + D +           G L E TI   L+  ++L+   Y H
Sbjct: 95  LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR--EVLEGLEYLH 138

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 17/94 (18%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPF------------IANSPPQLKQYYEKNLVLVPKVPV 52
           YD KAD++S G    +  TG AP+            + N PP L+   +       ++  
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD-----KEMLK 258

Query: 53  GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQ 86
                 ++++   L+++   R +  +L  H F Q
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHC--KESDQH 190
                  + VA+K + K         +  KEI IL+ L   +HEN+V+      ++    
Sbjct: 44  PEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNL---YHENIVKYKGICTEDGGNG 99

Query: 191 VYLVMEFCNGGDLADYL 207
           + L+MEF   G L +YL
Sbjct: 100 IKLIMEFLPSGSLKEYL 116

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV 194
           L        VA+K +    LA  ++F +E  +L  L    HE++V+          + +V
Sbjct: 39  LSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL---QHEHIVKFYGVCGDGDPLIMV 95

Query: 195 MEFCNGGDLADYLVSKGTLSEDT 217
            E+   GDL  +L + G  +   
Sbjct: 96  FEYMKHGDLNKFLRAHGPDAMIL 118

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGD 202
           VA+K + K+       F  E N++K+L    H+ +V L      + + +Y++ E+   G 
Sbjct: 40  VAVKSL-KQGSMSPDAFLAEANLMKQL---QHQRLVRLYAVV--TQEPIYIITEYMENGS 93

Query: 203 LADYL 207
           L D+L
Sbjct: 94  LVDFL 98

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 8/73 (10%)

Query: 143 HVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELL-HCKESDQHVYLVMEFCN 199
            VA+K +        + Q F  E+ +L++     H N++  + +   +   + +V ++C 
Sbjct: 48  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT---RHVNILLFMGYS--TAPQLAIVTQWCE 102

Query: 200 GGDLADYLVSKGT 212
           G  L  +L +  T
Sbjct: 103 GSSLYHHLHASET 115

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ--LKQYYEKNL-VLVPKVPVGTSAELKE 60
            Y  ++D+Y+ G ++++ +TG+ P+   +     ++     +L   + KV       +K 
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLA 89
           L+   LK+   +R SF ++ A   ++ LA
Sbjct: 261 LMAECLKKKRDERPSFPRILAE--IEELA 287

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VAIK I K+       F +E  ++  L    HE +V+L       + ++++ E+   G L
Sbjct: 51  VAIKMI-KEGSMSEDEFIEEAKVMMNL---SHEKLVQLYGVCTKQRPIFIITEYMANGCL 106

Query: 204 ADYL 207
            +YL
Sbjct: 107 LNYL 110

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVY 192
           LL   P   VA+K + K+  +     +F +E  ++ E     + N+V+LL      + + 
Sbjct: 71  LLPYEPFTMVAVKML-KEEASADMQADFQREAALMAEF---DNPNIVKLLGVCAVGKPMC 126

Query: 193 LVMEFCNGGDLADYLVSK 210
           L+ E+   GDL ++L S 
Sbjct: 127 LLFEYMAYGDLNEFLRSM 144

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 136 LSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC--KESDQHVYL 193
           L       VA+K++      + ++F +EI ILK L   H + +V+          Q + L
Sbjct: 47  LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL---HSDFIVKYRGVSYGPGRQSLRL 103

Query: 194 VMEFCNGGDLADYL 207
           VME+   G L D+L
Sbjct: 104 VMEYLPSGCLRDFL 117

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 17/109 (15%)

Query: 137 SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL--HCKESDQHVYLV 194
                +  A+K+I    ++ +    +EI +L+EL    H NV+ L       +D+ V+L+
Sbjct: 44  DGKDDKDYALKQIEGTGISMSA--CREIALLREL---KHPNVISLQKVFLSHADRKVWLL 98

Query: 195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQ----MLQL-----YFHD 234
            ++    DL   +        +   + L        + Q+     Y H 
Sbjct: 99  FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHV 191
           + +      VA+K  T   +   Q   +F  E  I+ +    +H+N+V  +         
Sbjct: 54  MPNDPSPLQVAVK--TLPEVCSEQDELDFLMEALIISKF---NHQNIVRCIGVSLQSLPR 108

Query: 192 YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQL 230
           +++ME   GGDL  +L              L +  +L +
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 145

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLH-CKESDQ 189
           LL +     H A+K  +   +        F  E  I+K+     H NV+ LL  C  S+ 
Sbjct: 46  LLDNDGKKIHCAVK--SLNRITDIGEVSQFLTEGIIMKDF---SHPNVLSLLGICLRSEG 100

Query: 190 HVYLVMEFCNGGDLADYL 207
              +V+ +   GDL +++
Sbjct: 101 SPLVVLPYMKHGDLRNFI 118

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
               +DL+++G I++Q + G  PF A +   +   ++K + L    P     + ++L+  
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI---FQKIIKLEYDFPEKFFPKARDLVEK 265

Query: 65  LLKRNAMDRI------SFEQLFAHPF 84
           LL  +A  R+       +  L AHPF
Sbjct: 266 LLVLDATKRLGCEEMEGYGPLKAHPF 291

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEF 197
           S+  AIK + K+++ K     K   + +E   ++ L H   V+L    + D+ +Y  + +
Sbjct: 55  SREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 111

Query: 198 CNGGDLADYLVSKGTLSEDTIR 219
              G+L  Y+   G+  E   R
Sbjct: 112 AKNGELLKYIRKIGSFDETCTR 133

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 54.3 bits (131), Expect = 8e-09
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 14/98 (14%)

Query: 140 PSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHC------KESDQHV 191
               VA+K +    +A +    F +E   +KE     H +V +L+        K      
Sbjct: 50  SFVKVAVKMLKADIIASSDIEEFLREAACMKEF---DHPHVAKLVGVSLRSRAKGRLPIP 106

Query: 192 YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
            +++ F   GDL  +L++            L L  +++
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFN---LPLQTLVR 141

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 15/102 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL------HCKESDQHVYLVM 195
           Q  AIK +      + +   +EIN+LK+ +  HH N+          +    D  ++LVM
Sbjct: 50  QLAAIKVM-DVTGDEEEEIKQEINMLKKYS--HHRNIATYYGAFIKKNPPGMDDQLWLVM 106

Query: 196 EFCNGGDLADYL--VSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           EFC  G + D +      TL E+ I       ++L+   + H
Sbjct: 107 EFCGAGSVTDLIKNTKGNTLKEEWIAYI--CREILRGLSHLH 146

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLH-CKESDQ 189
            +         AIK  +   + + Q    F +E  +++ L   +H NV+ L+      + 
Sbjct: 42  YIDQAQNRIQCAIK--SLSRITEMQQVEAFLREGLLMRGL---NHPNVLALIGIMLPPEG 96

Query: 190 HVYLVMEFCNGGDLADYLVSKG 211
             ++++ +   GDL  ++ S  
Sbjct: 97  LPHVLLPYMCHGDLLQFIRSPQ 118

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 14/87 (16%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGD 202
           VAIK + K      + F +E  ++K+L    HE +V+L      S++ +Y+V E+ + G 
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV--SEEPIYIVTEYMSKGS 264

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           L D+L  +          +L+L Q++ 
Sbjct: 265 LLDFLKGET-------GKYLRLPQLVD 284

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 8/81 (9%)

Query: 140 PSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
            +Q VAIK  T K+ A+      F  E  +   L    H NVV LL     DQ + ++  
Sbjct: 38  QTQAVAIK--TLKDKAEGPLREEFRHEAMLRARL---QHPNVVCLLGVVTKDQPLSMIFS 92

Query: 197 FCNGGDLADYLVSKGTLSEDT 217
           +C+ GDL ++LV +   S+  
Sbjct: 93  YCSHGDLHEFLVMRSPHSDVG 113

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDL 203
           VA+K + K      + F  E N++K L    H+ +V+L     + + +Y++ EF   G L
Sbjct: 215 VAVKTM-KPGSMSVEAFLAEANVMKTL---QHDKLVKLHAVV-TKEPIYIITEFMAKGSL 269

Query: 204 ADYL 207
            D+L
Sbjct: 270 LDFL 273

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL-----HCKESDQHVYLVME 196
           + VA+K  +  N    QNF  E NI + +  + H+N+   +        +      LVME
Sbjct: 37  RPVAVKVFSFANR---QNFINEKNIYR-VPLMEHDNIARFIVGDERVTADGRMEYLLVME 92

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIFL 222
           +   G L  YL    +    + R+  
Sbjct: 93  YYPNGSLXKYLSLHTSDWVSSCRLAH 118

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 135 LLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHV 191
           + +      VA+K  T   +   Q   +F  E  I+ +    +H+N+V  +         
Sbjct: 95  MPNDPSPLQVAVK--TLPEVCSEQDELDFLMEALIISKF---NHQNIVRCIGVSLQSLPR 149

Query: 192 YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQL 230
           ++++E   GGDL  +L              L +  +L +
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSS--LAMLDLLHV 186

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLH-CKESDQ 189
           LL +     H A+K  +   +        F  E  I+K+     H NV+ LL  C  S+ 
Sbjct: 110 LLDNDGKKIHCAVK--SLNRITDIGEVSQFLTEGIIMKDF---SHPNVLSLLGICLRSEG 164

Query: 190 HVYLVMEFCNGGDLADYL 207
              +V+ +   GDL +++
Sbjct: 165 SPLVVLPYMKHGDLRNFI 182

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 135 LLSPAPSQHVAIKRITKK-NLAKTQNFGKEINILKELTELHHENVVELL-HCKESDQHVY 192
           +   A  + VA+K + +    ++ +    E+ IL  +   HH NVV LL  C +    + 
Sbjct: 46  IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLM 103

Query: 193 LVMEFCNGGDLADYLVSK 210
           +++EFC  G+L+ YL SK
Sbjct: 104 VIVEFCKFGNLSTYLRSK 121

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 20/108 (18%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC-------KESDQHVYLV 194
             VAIK++ +    +     +E+ I+++L  LHH N+V+L             D ++ +V
Sbjct: 49  MSVAIKKVIQDPRFRN----RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV 104

Query: 195 MEFCNGGDL----ADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHDFT 236
           ME+     L     +Y   +       I++F  L Q+++     H  +
Sbjct: 105 MEYV-PDTLHRCCRNYYRRQVAPPPILIKVF--LFQLIRSIGCLHLPS 149

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 136 LSPAPSQHVAIKRITKKNLAKTQN-FGKEINILKELTELHHENVVELLHC--KESDQHVY 192
            +    + VA+K +      + ++ + +EI+IL+ L   +HE++++   C        + 
Sbjct: 55  TNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL---YHEHIIKYKGCCEDAGAASLQ 111

Query: 193 LVMEFCNGGDLADYL 207
           LVME+   G L DYL
Sbjct: 112 LVMEYVPLGSLRDYL 126

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 12/98 (12%)

Query: 138 PAPSQHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHC-----KESDQ 189
              S  VA+K + K + +  +    F  E   +K+     H NV+ LL        +   
Sbjct: 59  DGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDF---SHPNVIRLLGVCIEMSSQGIP 114

Query: 190 HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQM 227
              +++ F   GDL  YL+     +         L + 
Sbjct: 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKF 152

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 14/87 (16%)

Query: 144 VAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGD 202
           VAIK + K      + F +E  ++K+L    HE +V+L      S++ +Y+V E+ + G 
Sbjct: 294 VAIKTL-KPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVV--SEEPIYIVTEYMSKGS 347

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           L D+L  +          +L+L Q++ 
Sbjct: 348 LLDFLKGET-------GKYLRLPQLVD 367

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPV----GTSAELKEL 61
           + + D+  +G  ++  L  + P             E++    P  P         ++  +
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAV 239

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSP 107
               ++ +   R +   L        +A    +  P   +PV+ +P
Sbjct: 240 AARSVQGDGGIRSASTLLNLMQQATAVADRTEVLGPIDEAPVSAAP 285

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 7/35 (20%), Positives = 13/35 (37%)

Query: 173 LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 207
           +    V  +L    +     +V E+  GG L +  
Sbjct: 88  IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA 122

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 13/94 (13%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC-----KESDQHVYLV 194
           ++VAIK++ +  ++L   +   +EI IL  L     + ++ L              +Y+V
Sbjct: 52  KNVAIKKVNRMFEDLIDCKRILREITILNRL---KSDYIIRLYDLIIPDDLLKFDELYIV 108

Query: 195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           +E     DL     +   L+E+ I+    L+ +L
Sbjct: 109 LEIA-DSDLKKLFKTPIFLTEEHIKTI--LYNLL 139

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 137 SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
                  V +K + K +   +++F +  +++ +L    H+++V             LV E
Sbjct: 36  GQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL---SHKHLVLNYGVCVCGDENILVQE 92

Query: 197 FCNGGDLADYLVSKG 211
           F   G L  YL    
Sbjct: 93  FVKFGSLDTYLKKNK 107

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 51.9 bits (125), Expect = 5e-08
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 14/96 (14%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQH--VYLVMEFCN 199
           + V +K +      K +   +EI IL+ L      N++ L    +        LV E  N
Sbjct: 62  EKVVVKILKPVKKKKIK---REIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHVN 116

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
             D         TL++  IR +  ++++L+   Y H
Sbjct: 117 NTDFKQLY---QTLTDYDIRFY--MYEILKALDYCH 147

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 15/98 (15%)

Query: 141 SQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
            +  A+K ++K  + K   +  F +E +I+      +   VV+L +  + D+++Y+VME+
Sbjct: 94  RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---NSPWVVQLFYAFQDDRYLYMVMEY 150

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFL--------KLHQM 227
             GGDL + + S   + E   R +          +H M
Sbjct: 151 MPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHSM 187

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 26/145 (17%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVP----VGTSAELK 59
            Y  + D +SVG  +++ L G  PF A+S       Y K +     +        S E K
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---YSKIMNHKNSLTFPDDNDISKEAK 305

Query: 60  ELLLGLLKRNA--MDRISFEQLFAHPFLQPL---------APHPLIPEPHAGSPVTLSPE 108
            L+   L      + R   E++  H F +              P++P+        LS +
Sbjct: 306 NLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD--------LSSD 357

Query: 109 DSTDDFVVIPNSADVVSTSPPRPSS 133
             T +F  +        T P   + 
Sbjct: 358 IDTSNFDDLEEDKGEEETFPIPKAF 382

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL----HCKESDQHVYLVMEF 197
           ++VA+K  + ++    +++ +E  +      L HEN++  +      + S   ++L+  +
Sbjct: 32  ENVAVKIFSSRDE---KSWFRETELYN-TVMLRHENILGFIASDMTSRHSSTQLWLITHY 87

Query: 198 CNGGDLADYLVSKGTLSEDT-IRIFL 222
              G L DYL    TL   + +RI L
Sbjct: 88  HEMGSLYDYL-QLTTLDTVSCLRIVL 112

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 52.2 bits (125), Expect = 6e-08
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           YD+ AD +S+G ++F+ L G +PF  +      +     L +  ++P   S EL+ LL G
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427

Query: 65  LLKRNAMDRI-----SFEQLFAHPF 84
           LL+R+   R+       +++   PF
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPF 452

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 51.8 bits (124), Expect = 7e-08
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 145 AIKRITKKNLAKTQNFG---KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A+K + KK +   Q       E  +L  ++      +V + +   +   +  +++  NGG
Sbjct: 218 AMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG 277

Query: 202 DLADYLVSKGTLSEDTIRIF 221
           DL  +L   G  SE  +R +
Sbjct: 278 DLHYHLSQHGVFSEADMRFY 297

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHV 191
           L +       VAIK + K    + Q  +F  E +I+ +     H N++ L       +  
Sbjct: 70  LRVPGQRDVPVAIKAL-KAGYTERQRRDFLSEASIMGQF---DHPNIIRLEGVVTRGRLA 125

Query: 192 YLVMEFCNGGDLADYL 207
            +V E+   G L  +L
Sbjct: 126 MIVTEYMENGSLDTFL 141

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 51.5 bits (124), Expect = 7e-08
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 19/108 (17%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEIN---ILKE---LTELHHENVVELLHC-----KESD 188
             VAIKR+     +               +L+E   L   HH N++ L        + + 
Sbjct: 47  IPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106

Query: 189 QHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQ--LYFH 233
             +YLV E     DLA  +   +  +S   I+ F  ++ +L      H
Sbjct: 107 HKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYF--MYHILLGLHVLH 151

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 32/141 (22%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP------------------------PQLK 37
              +    D++S G ++ +    KA F  ++                         P  +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267

Query: 38  QYYEKNLVLVPKVPV-----GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP 92
            Y   +L  VP                +L+  +L+ N   RIS EQ   HP+ + L    
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL--FD 325

Query: 93  LIPEPHAGSPVTLSPEDSTDD 113
            +             ++S  D
Sbjct: 326 PLDLTEG-LSERFHFDESVTD 345

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 50.9 bits (122), Expect = 9e-08
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 8/70 (11%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL----HCKESDQHVYLVMEF 197
           + VA+K  + +     +++ +E  I +    L HEN++  +        +   ++LV ++
Sbjct: 66  EEVAVKIFSSREE---RSWFREAEIYQ-TVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121

Query: 198 CNGGDLADYL 207
              G L DYL
Sbjct: 122 HEHGSLFDYL 131

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 134 LLLSPAPSQHVAIK--RITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQH 190
                   + VA+K  +    + A       E N++++L    +  +V ++  C    + 
Sbjct: 37  YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL---DNPYIVRMIGIC--EAES 91

Query: 191 VYLVMEFCNGGDLADYLVSKGTLSEDTI 218
             LVME    G L  YL     + +  I
Sbjct: 92  WMLVMEMAELGPLNKYLQQNRHVKDKNI 119

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 140 PSQHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEF 197
              +VA+K   K       + F  E  I+K L    H ++V+L+      ++  +++ME 
Sbjct: 39  EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL---DHPHIVKLIGII--EEEPTWIIMEL 93

Query: 198 CNGGDLADYL 207
              G+L  YL
Sbjct: 94  YPYGELGHYL 103

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 14/127 (11%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQ--LKQYYEKNLVLVPKVPVGTSAELKELLL 63
           DA++D+YS+G ++++ LTG+ PF  +SP     +   E + +       G SA+L  ++L
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSARHEGLSADLDAVVL 255

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSADV 123
             L +N  +R           ++     P        +P  L+  + T    ++ ++A  
Sbjct: 256 KALAKNPENRYQTAAEMRADLVRVHNGEP------PEAPKVLTDAERT---SLLSSAAG- 305

Query: 124 VSTSPPR 130
            + S PR
Sbjct: 306 -NLSGPR 311

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 144 VAIKRITKKNLAKTQN----FGKEINILKELTELHHENVVELL----HCKESDQHVYLVM 195
           VA+K + + +LA+  +    F +E    +    L+H  +V +         +    Y+VM
Sbjct: 40  VAVK-VLRADLARDPSFYLRFRREA---QNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95

Query: 196 EFCNGGDLADYLVSKGTLS-EDTIRI 220
           E+ +G  L D + ++G ++ +  I +
Sbjct: 96  EYVDGVTLRDIVHTEGPMTPKRAIEV 121

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 17/83 (20%)

Query: 163 EINILKELTELHHENVVELL---HCKESDQH-----VYLVMEFCNGGDLADYLVSKGT-L 213
           EI IL+ L    HENVV L+     K S  +     +YLV +FC   DLA  L +     
Sbjct: 66  EIKILQLL---KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKF 121

Query: 214 SEDTIRIFLKLHQMLQ--LYFHD 234
           +   I+  ++   +L    Y H 
Sbjct: 122 TLSEIKRVMQ--MLLNGLYYIHR 142

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 29/135 (21%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIA-NSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           +Y    D +++G ++++ + G++PF       + ++       +  +     S + + L 
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLC 420

Query: 63  LGLLKRNAMDRI-----SFEQLFAHPFLQPL---------APHPLIPEPHAGS------- 101
             LL ++  +R+     S  ++  HP  + L            P  P+P A         
Sbjct: 421 SQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDI 480

Query: 102 -------PVTLSPED 109
                   V L P D
Sbjct: 481 EQFSTVKGVELEPTD 495

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 145 AIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A K++ KK + K +    E   L E   L +++   VV L +  E+   + LV+   NGG
Sbjct: 213 ACKKLEKKRIKKRK---GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 269

Query: 202 DL 203
           DL
Sbjct: 270 DL 271

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 20/140 (14%), Positives = 35/140 (25%), Gaps = 15/140 (10%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGL 65
               D+Y+VG  +                 L +             + T      LL   
Sbjct: 254 TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE---------DDPVLKTYDSYGRLLRRA 304

Query: 66  LKRNAMDRIS----FEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPNSA 121
           +  +   R +              + +A    +P P  G     SP  ST    ++    
Sbjct: 305 IDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRP--GLSTIFSPSRSTFGVDLLVAHT 362

Query: 122 DVVSTSPPRPSSLLLSPAPS 141
           DV          L  +   +
Sbjct: 363 DVYLDGQVHAEKLTANEIVT 382

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEI-NILKE---LTELHHENVVELLHCKESDQHVYLVME 196
             H A+K + K+ + K     K+I + L E   L  ++   +V+L    + + ++Y+VME
Sbjct: 66  GNHYAMKILDKQKVVKL----KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIF 221
           +  GG++  +L   G  SE   R +
Sbjct: 122 YVAGGEMFSHLRRIGRFSEPHARFY 146

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           Y+   D +++G ++++   G  PF A+ P Q+   YEK +    + P   S++LK+LL  
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQI---YEKIVSGKVRFPSHFSSDLKDLLRN 271

Query: 65  LLKRNAMDRI-----SFEQLFAHPF 84
           LL+ +   R          +  H +
Sbjct: 272 LLQVDLTKRFGNLKNGVNDIKNHKW 296

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 8/97 (8%)

Query: 141 SQHVAIKRIT-KKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
              +A K I  +   A      +E+ +L E    +   +V       SD  + + ME  +
Sbjct: 58  GLVMARKLIHLEIKPAIRNQIIRELQVLHEC---NSPYIVGFYGAFYSDGEISICMEHMD 114

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           GG L   L   G + E  +        +++   Y  +
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE 149

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLH-CKESDQH 190
            +    P+  VAIK   K   + +    F +E   +++     H ++V+L+     ++  
Sbjct: 36  YMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQF---DHPHIVKLIGVI--TENP 89

Query: 191 VYLVMEFCNGGDLADYL 207
           V+++ME C  G+L  +L
Sbjct: 90  VWIIMELCTLGELRSFL 106

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHV 191
           L L       VAIK + K    + Q  +F  E +I+ +     H N++ L       + V
Sbjct: 66  LKLPSKKEISVAIKTL-KVGYTEKQRRDFLGEASIMGQF---DHPNIIRLEGVVTKSKPV 121

Query: 192 YLVMEFCNGGDLADYL 207
            +V E+   G L  +L
Sbjct: 122 MIVTEYMENGSLDSFL 137

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 9/84 (10%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 141 SQHVAIKRIT-KKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
              +A+K++    N  + +    +++++ +        +V+      ++  V++ ME   
Sbjct: 50  GHVIAVKQMRRSGNKEENKRILMDLDVVLK--SHDCPYIVQCFGTFITNTDVFIAMELMG 107

Query: 200 GGDLADYLVSKGTLSEDTIRIFLK 223
                     +G + E  +     
Sbjct: 108 TCAEKLKKRMQGPIPERILGKMTV 131

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPP--QLKQYYEKNLVLVPKVPVGT--SAELKE 60
           YD +AD++S+G  + +  TG+ P+         L +  ++     P +P     S + + 
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PPLLPGHMGFSGDFQS 262

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQ 86
            +   L ++   R  + +L  H F++
Sbjct: 263 FVKDCLTKDHRKRPKYNKLLEHSFIK 288

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 140 PSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
               VAIK + K    + Q  +F  E  I+ +     H N++ L       + + ++ E+
Sbjct: 72  KEVPVAIKTL-KAGYTEKQRVDFLGEAGIMGQF---SHHNIIRLEGVISKYKPMMIITEY 127

Query: 198 CNGGDLADYLVS-KGTLS 214
              G L  +L    G  S
Sbjct: 128 MENGALDKFLREKDGEFS 145

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL----HCKESDQHVYLVMEF 197
           + VA+K           ++ +E  I +    + HEN++  +        S   +YL+ ++
Sbjct: 61  EKVAVKVFFTTEE---ASWFRETEIYQ-TVLMRHENILGFIAADIKGTGSWTQLYLITDY 116

Query: 198 CNGGDLADYL 207
              G L DYL
Sbjct: 117 HENGSLYDYL 126

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQ--LKQYYEKNLVLVPKVPVGTSAELKELLL 63
           D   D+YS+G ++++ L G+ PF   +     +K   +    +   V       L  ++L
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVIL 249

Query: 64  GLLKRNAMDR 73
              +++  +R
Sbjct: 250 RATEKDKANR 259

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 9/82 (10%)

Query: 144 VAIKRITKKNLAKTQN----FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           VAIK        + +     F +E+      ++L H+N+V ++   E D   YLVME+  
Sbjct: 39  VAIK-AIFIPPREKEETLKRFEREV---HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94

Query: 200 GGDLADYLVSKGTLS-EDTIRI 220
           G  L++Y+ S G LS +  I  
Sbjct: 95  GPTLSEYIESHGPLSVDTAINF 116

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 15/99 (15%)

Query: 141 SQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
            Q  A+K + K ++ K      F +E ++L          + +L    + + ++YLVME+
Sbjct: 86  GQVYAMKIMNKWDMLKRGEVSCFREERDVL---VNGDRRWITQLHFAFQDENYLYLVMEY 142

Query: 198 CNGGDLADYLVSKGT-LSEDTIRIFL--------KLHQM 227
             GGDL   L   G  +  +  R +L         +H++
Sbjct: 143 YVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL 181

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 23/151 (15%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--KQYYEKNLVLVPKVPVGTSAELKEL 61
            Y  + D +++G   ++   G+ PF A+S  +   K  + K  + +P V  G   E ++ 
Sbjct: 246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDF 305

Query: 62  LLGLLKRNAMDRI---SFEQLFAHPF--------LQPLAPHPLIPEPHAGSPVTLSPEDS 110
           +  LL      R+          HPF        L+   P P  P+              
Sbjct: 306 IQRLL-CPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVP-PFTPD--------FEGATD 355

Query: 111 TDDFVVIPNSADVVSTSPPRPSSLLLSPAPS 141
           T +F ++ +    + +      S +   AP 
Sbjct: 356 TCNFDLVEDGLTAMVSGGGETLSDIREGAPL 386

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 48.8 bits (117), Expect = 5e-07
 Identities = 13/68 (19%), Positives = 31/68 (45%)

Query: 6   DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGL 65
             +AD+Y++  ++++CLTG  P+  +    +  +  + +     V  G       ++   
Sbjct: 213 TYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARG 272

Query: 66  LKRNAMDR 73
           + +N  DR
Sbjct: 273 MAKNPEDR 280

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 171 TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRI 220
             L   +VV +    E D  +Y+ M   NG DLA  L  +G L+    + I
Sbjct: 89  GRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAI 139

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 48.7 bits (116), Expect = 5e-07
 Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 18/94 (19%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------VPKVPVGT 54
              Y  K D++S+G I+F+ L     F            E+  ++        P +    
Sbjct: 250 GNNYSHKVDIFSLGLILFELLY---SFSTQM--------ERVRIITDVRNLKFPLLFTQK 298

Query: 55  SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL 88
             +   ++  +L  +  +R     +  +   + L
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.9 bits (101), Expect = 4e-05
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 3/101 (2%)

Query: 137 SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
                +       T   L+           ++ +     +N V  L       ++Y+ M+
Sbjct: 82  QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQ 141

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIFLKL-HQMLQ--LYFHD 234
            C   +L D++  + +L +    + L +  Q+ +   + H 
Sbjct: 142 LCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 10/91 (10%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC--KESDQHVYLVMEF 197
           + VA+K+I    +N    Q   +EI IL EL+   HEN+V LL+    ++D+ VYLV ++
Sbjct: 35  EVVAVKKIFDAFQNSTDAQRTFREIMILTELS--GHENIVNLLNVLRADNDRDVYLVFDY 92

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
               DL   + +   L     +    ++Q++
Sbjct: 93  M-ETDLHAVIRAN-ILEPVHKQYV--VYQLI 119

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 18/102 (17%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
           + VAIK++++  ++    +   +E+ +LK +    HENV+ LL          +    YL
Sbjct: 50  EKVAIKKLSRPFQSEIFAKRAYRELLLLKHM---QHENVIGLLDVFTPASSLRNFYDFYL 106

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFH 233
           VM F    DL    +     SE+ I+    ++QML+   Y H
Sbjct: 107 VMPFM-QTDL--QKIMGLKFSEEKIQYL--VYQMLKGLKYIH 143

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 30/136 (22%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP-PQLK----------------------Q 38
            M Y+   D++SVG I+ + LTGK  F       QL                       +
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257

Query: 39  YYEKNLVLVPKVPV-----GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
            Y ++L   P+          S +  +LL  +L+ +   R++  Q   HPF +P      
Sbjct: 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF--RDP 315

Query: 94  IPEPHAGSPVTLSPED 109
             E  A  P   S E 
Sbjct: 316 EEETEAQQPFDDSLEH 331

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 9/68 (13%)

Query: 144 VAIKRI---TKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCN 199
           VA+K +            +F +E+N +  L    H N++ L          + +V E   
Sbjct: 49  VAVKCLKPDVLSQPEAMDDFIREVNAMHSL---DHRNLIRLYGVV--LTPPMKMVTELAP 103

Query: 200 GGDLADYL 207
            G L D L
Sbjct: 104 LGSLLDRL 111

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 23/98 (23%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEIN---ILKE---LTELHHENVVELLHC-----KESDQH 190
             VAIK+I+         F  +      L+E   L    HEN++ +         E  + 
Sbjct: 53  VRVAIKKIS--------PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104

Query: 191 VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           VY+V +     DL   L ++  LS D I  F  L+Q+L
Sbjct: 105 VYIVQDLM-ETDLYKLLKTQ-HLSNDHICYF--LYQIL 138

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 30/136 (22%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP-PQLK----------------------Q 38
           S  Y    D++SVG I+ + L+ +  F       QL                       +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 265

Query: 39  YYEKNLVLVPKVPV-----GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
            Y  +L    KVP         ++  +LL  +L  N   RI  EQ  AHP+L+    +  
Sbjct: 266 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY--YDP 323

Query: 94  IPEPHAGSPVTLSPED 109
             EP A +P     E 
Sbjct: 324 SDEPIAEAPFKFDMEL 339

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 48.0 bits (115), Expect = 7e-07
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLH-CKESDQH 190
           +         VAIK + K+   K       +E  I+ +L    +  +V L+  C+   + 
Sbjct: 30  VYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQL---DNPYIVRLIGVCQA--EA 83

Query: 191 VYLVMEFCNGGDLADYLVSKG 211
           + LVME   GG L  +LV K 
Sbjct: 84  LMLVMEMAGGGPLHKFLVGKR 104

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 47.8 bits (114), Expect = 9e-07
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 17/108 (15%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL-HCKESD---QHVYLVMEF 197
           ++VA+K    ++    Q++  E  +   L  + HEN+++ +   K        ++L+  F
Sbjct: 48  EYVAVKIFPIQD---KQSWQNEYEV-YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103

Query: 198 CNGGDLADYLVSKGTLSEDT-IRIFLK-------LHQMLQLYFHDFTP 237
              G L+D+L     +S +    I          LH+ +        P
Sbjct: 104 HEKGSLSDFL-KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP 150

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 134 LLLSPAPSQHVAIKRITKKNLAKTQ--NFGKEINILKELTELHHENVVELLH-CKESDQH 190
            +    P+  VAIK   K   + +    F +E   +++     H ++V+L+     ++  
Sbjct: 411 YMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQF---DHPHIVKLIGVI--TENP 464

Query: 191 VYLVMEFCNGGDLADYL 207
           V+++ME C  G+L  +L
Sbjct: 465 VWIIMELCTLGELRSFL 481

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIA-NSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           +YD   D +++G  +++ +  + PF A     + K+  ++ L      P   S   K+  
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFC 424

Query: 63  LGLLKRNAMDRI-----SFEQLFAHPF 84
             LL+++   R+     S + L  HP 
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPL 451

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 145 AIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A K++ KK L K +        + E   L ++H   +V L +  E+   + LVM   NGG
Sbjct: 214 ACKKLNKKRLKKRK---GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270

Query: 202 DL 203
           D+
Sbjct: 271 DI 272

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 19/92 (20%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
               YD   D + +G ++++ L G  PF + +  ++   Y+  L    ++    +   + 
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YDNILNKPLQLKPNITNSARH 268

Query: 61  LLLGLLKRNAMDRI----SFEQLFAHPFLQPL 88
           LL GLL+++   R+     F ++ +H F   +
Sbjct: 269 LLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 11/81 (13%)

Query: 145 AIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           A+K + KK + K        +   E N+L  L  + H  +V L    ++   +Y V+++ 
Sbjct: 67  AVKVLQKKAILKKKEEKHIMS---ERNVL--LKNVKHPFLVGLHFSFQTADKLYFVLDYI 121

Query: 199 NGGDLADYLVSKGTLSEDTIR 219
           NGG+L  +L  +    E   R
Sbjct: 122 NGGELFYHLQRERCFLEPRAR 142

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEI-NILKE---LTELHHENVVELLHCKESDQHVYLVME 196
            ++ A+K + K+ + +     K++ +   E   L+ + H  ++ +    +  Q ++++M+
Sbjct: 31  GRYYAMKVLKKEIVVRL----KQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86

Query: 197 FCNGGDLADYLVSKGTLSEDTIR 219
           +  GG+L   L           +
Sbjct: 87  YIEGGELFSLLRKSQRFPNPVAK 109

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
            +  Y+   D +S G ++++ L G  PF  ++  +    YEK L    + P   + ++K+
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YEKILNAELRFPPFFNEDVKD 232

Query: 61  LLLGLLKRNAMDRI-----SFEQLFAHPF 84
           LL  L+ R+   R+       E +  HP+
Sbjct: 233 LLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 23/98 (23%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEIN---ILKE---LTELHHENVVELLH-----CKESDQH 190
           + VAIK+I          F K +     L+E   L    HEN++ + +       E+   
Sbjct: 37  EIVAIKKIE--------PFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88

Query: 191 VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           VY++ E     DL   ++S   LS+D I+ F  ++Q L
Sbjct: 89  VYIIQELM-QTDLHR-VISTQMLSDDHIQYF--IYQTL 122

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 31/141 (21%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP-PQLK----------------------- 37
           S KY    D++S G I+ +    +  F       QL                        
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256

Query: 38  QYYEKNLVLVPKVPV-----GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP 92
           + Y K+L + P  P+       + +  +LL  +L  +   RI+ ++   HP+LQ    H 
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY--HD 314

Query: 93  LIPEPHAGSPVTLSPEDSTDD 113
              EP          E     
Sbjct: 315 PNDEPEGEPIPPSFFEFDHYK 335

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 15/95 (15%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
             VA+K++++  +++   +   +E+ +LK +    HENV+ LL         E    VYL
Sbjct: 55  LRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---KHENVIGLLDVFTPARSLEEFNDVYL 111

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           V     G DL + +  +  L++D ++    ++Q+L
Sbjct: 112 VTHLM-GADLNNIVKCQ-KLTDDHVQFL--IYQIL 142

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            ++   D +S+G +++  LTG  PF   +  +     +K L     +P   + E ++LL 
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT---IDKILKCKLNLPPYLTQEARDLLK 253

Query: 64  GLLKRNAMDRI-----SFEQLFAHPF 84
            LLKRNA  R+        ++ AHPF
Sbjct: 254 KLLKRNAASRLGAGPGDAGEVQAHPF 279

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 145 AIKRITKKNLAKTQNFGKEI-NILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           A+K + K  + +     K+  +   E   L E+ H  +V+L++  ++   +YL++E+ +G
Sbjct: 49  AMKVLKKAMIVRNA---KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSG 105

Query: 201 GDLADYLVSKGTLSEDTIRIFL 222
           G+L   L  +G   EDT   +L
Sbjct: 106 GELFMQLEREGIFMEDTACFYL 127

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 10/79 (12%)

Query: 144 VAIKRITKKNLAKTQN--FGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNG 200
           VAIK + ++  +   N     E  ++  +    + +V  LL  C      V L+ +    
Sbjct: 47  VAIKEL-REATSPKANKEILDEAYVMASV---DNPHVCRLLGIC--LTSTVQLITQLMPF 100

Query: 201 GDLADYL-VSKGTLSEDTI 218
           G L DY+   K  +    +
Sbjct: 101 GCLLDYVREHKDNIGSQYL 119

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            +   AD +S G ++F+ LTG  PF      +        L     +P   S E + LL 
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET---MTMILKAKLGMPQFLSPEAQSLLR 258

Query: 64  GLLKRNAMDRI-----SFEQLFAHPF 84
            L KRN  +R+       E++  H F
Sbjct: 259 MLFKRNPANRLGAGPDGVEEIKRHSF 284

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 145 AIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A+K + K  L         +    E   L E++H  +V+L +  +++  +YL+++F  GG
Sbjct: 56  AMKVLKKATLKVR----DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG 111

Query: 202 DLADYLVSKGTLSEDTIRIFL 222
           DL   L  +   +E+ ++ +L
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYL 132

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 23/144 (15%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--KQYYEKNLVLVPKVPVGTSAELKEL 61
           +Y  + D +S+G  +++ L G+ PF A S  +   K    K     P      S   K+L
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDL 316

Query: 62  LLGLLKRNAMDRI---SFEQLFAHPF--------LQPLAPHPLIPEPHAGSPVTLSPEDS 110
           +  L+      R+     E    HPF        ++     P IPE        +S    
Sbjct: 317 IRRLICSRE-HRLGQNGIEDFKKHPFFSGIDWDNIRNCEA-PYIPE--------VSSPTD 366

Query: 111 TDDFVVIPNSADVVSTSPPRPSSL 134
           T +F V  +      T PP   + 
Sbjct: 367 TSNFDVDDDCLKNSETMPPPTHTA 390

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 145 AIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A+K + K  + K   T  F +E ++L        + +  L +  + D ++YLVM++  GG
Sbjct: 103 AMKILNKWEMLKRAETACFREERDVLVNG---DSKWITTLHYAFQDDNNLYLVMDYYVGG 159

Query: 202 DLADYLV-SKGTLSEDTIRIFL--------KLHQM 227
           DL   L   +  L E+  R +L         +HQ+
Sbjct: 160 DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 144 VAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGG 201
           VAIK + +       +   +E  I+ +L    +  +V L+  C    + + LVME   GG
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQL---DNPYIVRLIGVC--QAEALMLVMEMAGGG 420

Query: 202 DLADYLVSKG 211
            L  +LV K 
Sbjct: 421 PLHKFLVGKR 430

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 16/95 (16%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
           ++VAIK++++  +N    +   +E+ ++K +   +H+N++ LL+        E  Q VY+
Sbjct: 51  RNVAIKKLSRPFQNQTHAKRAYRELVLMKCV---NHKNIIGLLNVFTPQKSLEEFQDVYI 107

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           VME     +L    V +  L  + +     L+QML
Sbjct: 108 VMELM-DANL--CQVIQMELDHERMSYL--LYQML 137

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 7/67 (10%)

Query: 143 HVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNG 200
            V IK I  K+  ++ Q     +  +  L    H ++V LL  C      + LV ++   
Sbjct: 44  PVCIKVIEDKSGRQSFQAVTDHMLAIGSL---DHAHIVRLLGLC--PGSSLQLVTQYLPL 98

Query: 201 GDLADYL 207
           G L D++
Sbjct: 99  GSLLDHV 105

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIA-NSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
           +D   D +S+G ++++ LTG +PF          +   + L   P  P   SA  K+L+ 
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 298

Query: 64  GLLKRNAMDRI-----SFEQLFAHPF 84
            LL ++   R+       +++  H F
Sbjct: 299 RLLMKDPKKRLGCGPRDADEIKEHLF 324

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 15/82 (18%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 145 AIKRITKKNLAKTQNFGK----EINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           A+K + K  + +     +    E  +L+ +       +V L +  +++  ++L++++ NG
Sbjct: 86  AMKVLKKATIVQKAKTTEHTRTERQVLEHIR--QSPFLVTLHYAFQTETKLHLILDYING 143

Query: 201 GDLADYLVSKGTLSEDTIRIFL 222
           G+L  +L  +   +E  ++I++
Sbjct: 144 GELFTHLSQRERFTEHEVQIYV 165

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 16/95 (16%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
           ++VAIK++++  +N    +   +E+ ++K +   +H+N++ LL+        E  Q VYL
Sbjct: 88  RNVAIKKLSRPFQNQTHAKRAYRELVLMKCV---NHKNIISLLNVFTPQKTLEEFQDVYL 144

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           VME     +L    V +  L  + +     L+QML
Sbjct: 145 VMELM-DANL--CQVIQMELDHERMSYL--LYQML 174

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 21/101 (20%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH--------------CKES 187
           + VAIK+I   +    ++  +EI I++ L    H+N+V++                    
Sbjct: 37  KRVAIKKIVLTDPQSVKHALREIKIIRRL---DHDNIVKVFEILGPSGSQLTDDVGSLTE 93

Query: 188 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
              VY+V E+    DLA+ ++ +G L E+  R+F  ++Q+L
Sbjct: 94  LNSVYIVQEYM-ETDLAN-VLEQGPLLEEHARLF--MYQLL 130

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 27/114 (23%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP-PQLK---------------------QY 39
              Y    D+++ G I  + LTGK  F       Q++                       
Sbjct: 199 PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV 258

Query: 40  YEKNLVLVPKVPV-----GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL 88
           Y +N +  P  P+     G S E  + L  +L  + MDR++ E+  +HP++   
Sbjct: 259 YIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY 312

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 15/95 (15%)

Query: 142 QHVAIKRITK--KNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
             VAIK++ +  ++    +   +E+ +LK +    HENV+ LL         +     YL
Sbjct: 51  AKVAIKKLYRPFQSELFAKRAYRELRLLKHM---RHENVIGLLDVFTPDETLDDFTDFYL 107

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQML 228
           VM F  G DL   +  +  L ED I+    ++QML
Sbjct: 108 VMPFM-GTDLGKLMKHE-KLGEDRIQFL--VYQML 138

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            Y    D + +G ++++ + G+ PF      +L   +E  L+   + P     E K LL 
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FELILMEEIRFPRTLGPEAKSLLS 381

Query: 64  GLLKRNAMDRI-----SFEQLFAHPF 84
           GLLK++   R+       +++  H F
Sbjct: 382 GLLKKDPKQRLGGGSEDAKEIMQHRF 407

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 145 AIKRITKKNLAKTQNFGKEI-NILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           A+K + K+ +        E+ + L E   L    H  +  L +  ++   +  VME+ NG
Sbjct: 177 AMKILKKEVIVAK----DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232

Query: 201 GDLADYLVSKGTLSEDTIRIF 221
           G+L  +L  +   SED  R +
Sbjct: 233 GELFFHLSRERVFSEDRARFY 253

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELL-HCKESDQHVYLVMEFCNG 200
             VA+KR T ++    + F  EI  L   +   H ++V L+  C E ++ + L+ ++   
Sbjct: 64  AKVALKRRTPESSQGIEEFETEIETL---SFCRHPHLVSLIGFCDERNEMI-LIYKYMEN 119

Query: 201 GDLADYL 207
           G+L  +L
Sbjct: 120 GNLKRHL 126

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 7/67 (10%)

Query: 143 HVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNG 200
            VAIK + +    K  +    E  ++  +    + +V  LL  C      V L+ +    
Sbjct: 46  PVAIKELREATSPKANKEILDEAYVMASV---DNPHVCRLLGIC--LTSTVQLITQLMPF 100

Query: 201 GDLADYL 207
           G L DY+
Sbjct: 101 GCLLDYV 107

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
             Y    D ++ G ++++ L G+APF      +L   ++  +      P   S E   + 
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVAYPKSMSKEAVAIC 573

Query: 63  LGLLKRNAMDRI-----SFEQLFAHPF 84
            GL+ ++   R+         +  H F
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAF 600

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 163 EINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 222
           E  +L          + +L  C ++   +Y VME+ NGGDL  ++   G   E     + 
Sbjct: 391 EKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 448

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
             Y    D ++ G ++++ L G+APF      +L   ++  +      P   S E   + 
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVAYPKSMSKEAVAIC 252

Query: 63  LGLLKRNAMDRI-----SFEQLFAHPF 84
            GL+ ++   R+         +  H F
Sbjct: 253 KGLMTKHPGKRLGCGPEGERDIKEHAF 279

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 163 EINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 222
           E  +L          + +L  C ++   +Y VME+ NGGDL  ++   G   E     + 
Sbjct: 70  EKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA 127

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            Y    D + +G ++++ + G+ PF      +L   +E  L+   + P   S E K LL 
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLA 237

Query: 64  GLLKRNAMDRI-----SFEQLFAHPF 84
           GLLK++   R+       +++  H F
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRF 263

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 145 AIKRITKKNLAKTQNFGKEI-NILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           A+K + K+ +        E+ + + E   L    H  +  L +  ++   +  VME+ NG
Sbjct: 34  AMKILRKEVIIAK----DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89

Query: 201 GDLADYLVSKGTLSEDTIRIF 221
           G+L  +L  +   +E+  R +
Sbjct: 90  GELFFHLSRERVFTEERARFY 110

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 9/92 (9%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           M Y    D +++G ++++ L G APF A +   L   +E  L      P     +   +L
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL---FEAILNDEVVYPTWLHEDATGIL 255

Query: 63  LGLLKRNAMDRI------SFEQLFAHPFLQPL 88
              + +N   R+          +  HPF + +
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 163 EINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 220
           E  IL      +H  + +L  C ++   ++ VMEF NGGDL  ++       E   R 
Sbjct: 73  EKRILSLAR--NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF 128

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------KQYYEKNLVLVPKVPVGTSA 56
             Y    D +++G ++F+ + G++PF                 ++  L    ++P   S 
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV 244

Query: 57  ELKELLLGLLKRNAMDRI------SFEQLFAHPFLQPL 88
           +   +L   L ++  +R+       F  +  HPF + +
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 145 AIKRITKKNLAKTQNFG---KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A+K + K+ +   ++      E ++ ++ +  +H  +V L  C +++  ++ V+E+ NGG
Sbjct: 38  AMKVVKKELVNDDEDIDWVQTEKHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVNGG 95

Query: 202 DLADYLVSKGTLSEDTIRIF 221
           DL  ++  +  L E+  R +
Sbjct: 96  DLMFHMQRQRKLPEEHARFY 115

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
            KY+   D +S G ++++ L G++PF      +L   +    +  P  P     E K+LL
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL---FHSIRMDNPFYPRWLEKEAKDLL 249

Query: 63  LGLLKRNAMDRI-SFEQLFAHPFLQPL 88
           + L  R    R+     +  HP  + +
Sbjct: 250 VKLFVREPEKRLGVRGDIRQHPLFREI 276

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 145 AIKRITKKNLAKTQNFG---KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           AIK + K  +    +      E  +L       H  +  +    ++ ++++ VME+ NGG
Sbjct: 46  AIKALKKDVVLMDDDVECTMVEKRVLS--LAWEHPFLTHMFCTFQTKENLFFVMEYLNGG 103

Query: 202 DLADYLVSKGTLSEDTIR 219
           DL  ++ S          
Sbjct: 104 DLMYHIQSCHKFDLSRAT 121

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 141 SQHVAIKRI-TKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
            Q +A+KRI +  +  + +    +++++  +       +V+       +   ++ ME  +
Sbjct: 47  GQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRSSDCPYIVQFYGALFREGDCWICMELMS 104

Query: 200 GGDLADY----LVSKGTLSEDTIRI 220
                 Y     V    + E+ +  
Sbjct: 105 TSFDKFYKYVYSVLDDVIPEEILGK 129

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPP--QLKQ-YYEKNLVLVPKVPVGTSAELKEL 61
           YD ++D++S+G  +++  TG+ P+   +    QL Q        L        S      
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINF 265

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQ 86
           +   L ++   R  +++L  HPF+ 
Sbjct: 266 VNLCLTKDESKRPKYKELLKHPFIL 290

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 10/100 (10%)

Query: 141 SQHVAIKRIT-KKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
            Q +A+KRI    N  + +    +++I   +  +     V        +  V++ ME  +
Sbjct: 32  GQIMAVKRIRATVNSQEQKRLLMDLDIS--MRTVDCPFTVTFYGALFREGDVWICMELMD 89

Query: 200 GG---DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
                     +    T+ ED +        +++   + H 
Sbjct: 90  TSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLHS 127

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPP--QLKQYYEKNLVLVPKVPVGT-SAELKEL 61
           Y  K+D++S+G  + +    + P+ +   P  QLKQ  E+     P++P    SAE  + 
Sbjct: 190 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP---SPQLPADKFSAEFVDF 246

Query: 62  LLGLLKRNAMDRISFEQLFAHPFLQ 86
               LK+N+ +R ++ +L  HPF  
Sbjct: 247 TSQCLKKNSKERPTYPELMQHPFFT 271

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 18/136 (13%), Positives = 51/136 (37%), Gaps = 54/136 (39%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC----------------- 184
           +  A+K++ +    + +N  +E++I+K L    H N+++L+                   
Sbjct: 33  KRFALKKVLQD--PRYKN--RELDIMKVL---DHVNIIKLVDYFYTTGDEEPKPPQPPDD 85

Query: 185 ---------------------KESDQHVYLVMEFCNGGDL----ADYLVSKGTLSEDTIR 219
                                   ++++ ++ME+     L      ++ S  ++  + I 
Sbjct: 86  HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV-PDTLHKVLKSFIRSGRSIPMNLIS 144

Query: 220 IFLKLHQMLQ--LYFH 233
           I+  ++Q+ +   + H
Sbjct: 145 IY--IYQLFRAVGFIH 158

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 17/81 (20%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 145 AIKRITKKNLAKTQNFG---KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           A++ + K+ +   ++      E ++ ++ +  +H  +V L  C +++  ++ V+E+ NGG
Sbjct: 81  AMRVVKKELVNDDEDIDWVQTEKHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVNGG 138

Query: 202 DLADYLVSKGTLSEDTIRIFL 222
           DL  ++  +  L E+  R + 
Sbjct: 139 DLMFHMQRQRKLPEEHARFYS 159

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------KQYYEKNLVLVPKVPVGTSA 56
             Y    D +++G ++F+ + G++PF                 ++  L    ++P   S 
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV 287

Query: 57  ELKELLLGLLKRNAMDRI------SFEQLFAHPFLQPL 88
           +   +L   L ++  +R+       F  +  HPF + +
Sbjct: 288 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 6e-04
 Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 63/242 (26%)

Query: 10  DLYSVGTI-VF--QC---LTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
           ++ +      F   C   LT +   + +    L      ++ L       T  E+K LLL
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDF---LSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLS--PEDSTDDFVVIPN-- 119
             L          + L            P   E    +P  LS   E   D      N  
Sbjct: 309 KYLD------CRPQDL------------P--REVLTTNPRRLSIIAESIRDGLATWDNWK 348

Query: 120 --SADVVSTSPPRPSSL-LLSPAPSQHV----AIKRITKKNLAKTQNFGKEINILKELTE 172
             + D ++T     SSL +L PA  + +    ++             F    +I      
Sbjct: 349 HVNCDKLTTI--IESSLNVLEPAEYRKMFDRLSV-------------FPPSAHI------ 387

Query: 173 LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYF 232
                ++ L+        V +V+   +   L +    + T+S  +I + LK+    +   
Sbjct: 388 --PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 233 HD 234
           H 
Sbjct: 446 HR 447

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 142 QHVAIKRITKKNLAKTQN----FGKEINILKELTELHHENVVELL-HCKESDQHVYLVME 196
             VA+K++       T+     F +EI ++    +  HEN+VELL    + D    LV  
Sbjct: 55  TTVAVKKLAAMVDITTEELKQQFDQEIKVM---AKCQHENLVELLGFSSDGDDLC-LVYV 110

Query: 197 FCNGGDLADYL 207
           +   G L D L
Sbjct: 111 YMPNGSLLDRL 121

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.94
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.93
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.93
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.92
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.92
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.92
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.91
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.89
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.88
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.88
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.87
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.87
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.87
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.86
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.86
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.86
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.86
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.86
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.86
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.86
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.86
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.85
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.85
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.85
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.85
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.85
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.85
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.85
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.85
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.85
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.85
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.85
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.84
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.84
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.84
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.84
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.84
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.84
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.84
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.84
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.84
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.84
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.83
3uqc_A	286	Probable conserved transmembrane protein; structur	99.83
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.83
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.83
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.83
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.83
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.83
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.83
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.83
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.82
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.82
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.82
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.82
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.82
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.82
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.82
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.82
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.82
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.82
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.82
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.82
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.81
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.81
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.81
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.81
3bhy_A	283	Death-associated protein kinase 3; death associate	99.81
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.81
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.81
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.81
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.81
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.81
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.81
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.81
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.81
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.81
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.81
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.8
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.8
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.8
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.8
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.8
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.8
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.8
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.8
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.8
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.8
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.8
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.8
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.8
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.8
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.8
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.8
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.8
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.8
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.8
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.8
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.8
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.8
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.8
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.8
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.79
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.79
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.79
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.79
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.79
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.79
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.79
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.79
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.79
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.79
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.79
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.79
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.79
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.79
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.79
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.79
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.78
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.78
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.78
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.78
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.78
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.78
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.78
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.78
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.78
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.78
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.78
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.78
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.78
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.78
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.78
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.78
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.78
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.78
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.78
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.78
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.77
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.77
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.77
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.77
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.77
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.77
3niz_A	311	Rhodanese family protein; structural genomics, str	99.77
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.77
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.77
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.77
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.77
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.77
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.77
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.77
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.76
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.76
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.76
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.76
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.76
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.76
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.76
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.76
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.76
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.76
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.76
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.76
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.75
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.75
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.75
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.75
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.75
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.75
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.75
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.75
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.75
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.75
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.75
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.75
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.75
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.75
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.75
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.75
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.75
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.74
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.74
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.74
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.74
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.74
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.74
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.74
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.74
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.73
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.73
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.73
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.73
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.73
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.73
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.73
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.73
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.73
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.73
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.73
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.73
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.73
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.73
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.73
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.73
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.73
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.72
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.72
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.72
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.72
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.72
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.72
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.72
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.72
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.72
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.72
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.72
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.71
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.71
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.71
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.71
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.71
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.71
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.71
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.71
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.71
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.71
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.7
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.7
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.7
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.7
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.7
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.7
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.7
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.7
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.7
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.7
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.7
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.7
3niz_A	311	Rhodanese family protein; structural genomics, str	99.7
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.7
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.7
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.7
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.69
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.69
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.69
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.69
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.69
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.69
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.69
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.69
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.69
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.69
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.69
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.69
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.69
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.69
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.69
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.68
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.68
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.68
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.68
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.68
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.68
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.68
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.68
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.68
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.68
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.68
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.68
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.68
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.68
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.68
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.68
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.67
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.67
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.67
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.67
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.67
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.67
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.66
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.66
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.66
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.66
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.66
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.66
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.66
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.66
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.66
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.66
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.65
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.65
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.65
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.65
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.65
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.65
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.65
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.65
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.65
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.65
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.65
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.65
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.64
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.64
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.64
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.64
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.64
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.64
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.64
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.64
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.64
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.64
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.64
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.64
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.64
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.64
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.64
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.64
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.63
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.63
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.63
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.63
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.63
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.63
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.63
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.63
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.63
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.62
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.62
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.62
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.62
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.62
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.62
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.62
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.62
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.62
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.62
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.62
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.61
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.61
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.61
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.61
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.61
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.61
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.61
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.61
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.61
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.61
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.61
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.6
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.6
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.6
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.6
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.6
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.6
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.59
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.59
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.59
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.59
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.59
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.59
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.59
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.59
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.59
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.59
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.59
3bhy_A	283	Death-associated protein kinase 3; death associate	99.58
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.58
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.58
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.58
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.58
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.58
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.57
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.57
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.57
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.57
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.56
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.55
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.54
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.54
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.52
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.52
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.52
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.52
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.52
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.52
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.51
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.51
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.51
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.5
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.5
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.5
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.5
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.5
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.49
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.49
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.49
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.49
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.49
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.49
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.49
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.48
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.48
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.48
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.48
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.48
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.48
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.48
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.47
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.47
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.47
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.47
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.47
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.47
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.46
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.46
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.46
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.46
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.46
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.46
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.46
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.45
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.45
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.45
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.45
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.45
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.45
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.45
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.44
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.44
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.44
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.44
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.44
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.44
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.43
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.43
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.43
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.43
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.43
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.43
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.42
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.42
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.41
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.41
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.41
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.4
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.39
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.39
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.38
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.38
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.37
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.37
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.36
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.36
3uqc_A	286	Probable conserved transmembrane protein; structur	99.35
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.35
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.34
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.34
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.33
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.33
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.32
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.32
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.32
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.31
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.31
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.28
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.27
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.27
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.26
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.25
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.25
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.25
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.24
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.2
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.19

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=7.3e-29  Score=196.99  Aligned_cols=120  Identities=21%  Similarity=0.362  Sum_probs=109.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+....+   .+.+.+|+.+++.++   |||||+++++|.+.+.+|||||||
T Consensus        38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~yivmEy~  114 (311)
T 4aw0_A           38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD---HPFFVKLYFTFQDDEKLYFGLSYA  114 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEeCCEEEEEEecC
Confidence            57899999999999999999999999998754322   356788999988776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.++|.+.+.++|.+++.|+.|++.|+.|||       |+||+||||..
T Consensus       115 ~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~  167 (311)
T 4aw0_A          115 KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE  167 (311)
T ss_dssp             TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcC
Confidence            99999999999889999999999999999999999       99999999954

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=4e-28  Score=195.50  Aligned_cols=120  Identities=20%  Similarity=0.304  Sum_probs=111.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++........+.+.+|+.+++.++   |||||+++++|.+.+.+|||||||+||
T Consensus        80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~---HpnIV~l~~~~~~~~~~~ivmEy~~gg  156 (346)
T 4fih_A           80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ---HENVVEMYNSYLVGDELWVVMEFLEGG  156 (346)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            56899999999999999999999999998776666677899999999887   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+. .+++.+++.|+.|++.||.|||       |+||+||||...
T Consensus       157 ~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  206 (346)
T 4fih_A          157 ALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD  206 (346)
T ss_dssp             EHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             cHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCC
Confidence            999999865 5999999999999999999999       999999999643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=1.5e-27  Score=196.74  Aligned_cols=120  Identities=20%  Similarity=0.304  Sum_probs=110.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++........+.+.+|+.+++.++   |||||+++++|.+.+.+|||||||+||
T Consensus       157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~---HpnIV~l~~~~~~~~~~~iVmEy~~gG  233 (423)
T 4fie_A          157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ---HENVVEMYNSYLVGDELWVVMEFLEGG  233 (423)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCC---CCCCCceEEEEEECCEEEEEEeCCCCC
Confidence            46899999999999999999999999998776666677899999999887   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.++++.. .+++.+++.++.|++.||.|||       |+||+||||...
T Consensus       234 ~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~  283 (423)
T 4fie_A          234 ALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD  283 (423)
T ss_dssp             EHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTT
T ss_pred             cHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC
Confidence            999999765 5999999999999999999999       999999999643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=3.2e-27  Score=190.55  Aligned_cols=121  Identities=20%  Similarity=0.351  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....  .+.+.+|+.+++.++   |||||+++++|.+.+.+|||||||+
T Consensus        30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIV~~~~~~~~~~~~yiVmEy~~  106 (350)
T 4b9d_A           30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK---HPNIVQYRESFEENGSLYIVMDYCE  106 (350)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCC---CCCCCcEEEEEEECCEEEEEEeCCC
Confidence            57899999999999999999999999998764332  356889999999887   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.++|..++  .++|.+++.|+.|++.||.|||       |+||+||||...
T Consensus       107 gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  161 (350)
T 4b9d_A          107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD  161 (350)
T ss_dssp             TCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTT
T ss_pred             CCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCC
Confidence            999999997653  5799999999999999999999       999999999643

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.94  E-value=1.7e-27  Score=191.31  Aligned_cols=115  Identities=18%  Similarity=0.211  Sum_probs=105.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|+++....     ..+|+.+++.++   |||||+++++|.+.+.+|||||||+||
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~---HpnIV~l~~~~~~~~~~~ivmEy~~gg  135 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLS---SPRIVPLYGAVREGPWVNIFMELLEGG  135 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCC---CTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            358999999999999999999999999976432     346888887766   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.++|++.+.+++.+++.|+.|++.||.|||       |+||+||||..
T Consensus       136 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~  185 (336)
T 4g3f_A          136 SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS  185 (336)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECT
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeC
Confidence            99999999889999999999999999999999       99999999964

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.94  E-value=8.7e-27  Score=182.52  Aligned_cols=119  Identities=28%  Similarity=0.442  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+....+   ...+.+|+.+++.++   |||||++++++.+.+.+|+|||||
T Consensus        19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~~~~~~~~~~~~~ivmEy~   95 (275)
T 3hyh_A           19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR---HPHIIKLYDVIKSKDEIIMVIEYA   95 (275)
T ss_dssp             EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC---CCCCCeEEEEEEECCEEEEEEeCC
Confidence            56899999999999999999999999998754332   245789999999887   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       +|+|.+++.+++.+++.+++.++.|++.|+.|||       |+||+||||..
T Consensus        96 -~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~  147 (275)
T 3hyh_A           96 -GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDE  147 (275)
T ss_dssp             -CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT
T ss_pred             -CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECC
Confidence             6899999999999999999999999999999999       99999999964

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=1.1e-26  Score=183.40  Aligned_cols=118  Identities=23%  Similarity=0.297  Sum_probs=106.1

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEEe
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVME  196 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e  196 (249)
                      .+|.|++|.||++.+..++..||+|.+.......  .+.+.+|+.+++.++   |||||+++++|.+    ...+|||||
T Consensus        33 ~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIV~~~~~~~~~~~~~~~~~lvmE  109 (290)
T 3fpq_A           33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTVKGKKCIVLVTE  109 (290)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEeeccCCCcEEEEEEe
Confidence            5899999999999999999999999998654332  356889999998887   9999999999875    356999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeee
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVIL  243 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~  243 (249)
                      ||+||+|.+++.+.+.+++..++.++.|++.||.|||         |+||+||||.
T Consensus       110 y~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~  165 (290)
T 3fpq_A          110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT  165 (290)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE
Confidence            9999999999999889999999999999999999999         8999999995

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.93  E-value=6e-27  Score=185.88  Aligned_cols=121  Identities=22%  Similarity=0.321  Sum_probs=101.8

Q ss_pred             ccccCCCCcceeeccC---CCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|++|.||++.+   ..+++.||+|++.+.....  ...+.+|+.+++.++   |||||+++++|.+.+.+|||||
T Consensus        30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~~ivmE  106 (304)
T 3ubd_A           30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN---HPFIVKLHYAFQTEGKLYLILD  106 (304)
T ss_dssp             EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCC---CTTEECEEEEEEETTEEEEEEC
T ss_pred             EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCC---CCCCCeEEEEEEECCEEEEEEE
Confidence            5789999999998865   3568899999998754332  345778888887665   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+||+|.+++.+.+.+++.+++.++.|++.||.|||       |+||+|||+...
T Consensus       107 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~  162 (304)
T 3ubd_A          107 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE  162 (304)
T ss_dssp             CCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCC
Confidence            9999999999999989999999999999999999999       999999998643

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.93  E-value=5.1e-26  Score=180.70  Aligned_cols=121  Identities=17%  Similarity=0.265  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||++...     .++..||+|+++.......+.+.+|+.+++.++   |||||++++++.+.+.+|||||
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~---HpnIV~l~g~~~~~~~~~lV~E   95 (299)
T 4asz_A           19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ---HEHIVKFYGVCVEGDPLIMVFE   95 (299)
T ss_dssp             EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSSSEEEEEE
T ss_pred             eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCC---CCCCccEEEEEeeCCEEEEEEE
Confidence            35799999999998643     457889999998655444567889999998876   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKG-------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+||+|.++|++.+             .+++.++..++.|++.|+.|||       |+||+||||...
T Consensus        96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~  164 (299)
T 4asz_A           96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN  164 (299)
T ss_dssp             CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC
Confidence            999999999998643             5999999999999999999999       999999999643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.92  E-value=2.1e-25  Score=192.34  Aligned_cols=124  Identities=16%  Similarity=0.158  Sum_probs=110.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+.....   .....+|..++..+..++|||||+++++|.+.+.+|||||||
T Consensus       195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~  274 (689)
T 3v5w_A          195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM  274 (689)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecC
Confidence            57899999999999999999999999998764332   234566777777777778999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.++|.+.+.++|..++.|+.||+.||.|||       |+||+||||...
T Consensus       275 ~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~  328 (689)
T 3v5w_A          275 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH  328 (689)
T ss_dssp             CSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCC
Confidence            99999999999999999999999999999999999       999999999643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.92  E-value=1.4e-25  Score=180.49  Aligned_cols=120  Identities=18%  Similarity=0.258  Sum_probs=104.1

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.||.||++..     ..+++.||||+++.......+.+.+|+.+++.++   |||||++++++.+...+|||||
T Consensus        47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~---HpnIV~l~g~~~~~~~~~lV~E  123 (329)
T 4aoj_A           47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ---HQHIVRFFGVCTEGRPLLMVFE  123 (329)
T ss_dssp             EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEE
Confidence            3589999999999853     3468899999998655444577899999998876   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK---------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~---------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+||+|.+++++.               +.+++.++..++.|++.||.|||       |+||+||||..
T Consensus       124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~  193 (329)
T 4aoj_A          124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ  193 (329)
T ss_dssp             CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence            99999999999764               35899999999999999999999       99999999964

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.92  E-value=3.4e-25  Score=176.18  Aligned_cols=120  Identities=17%  Similarity=0.239  Sum_probs=100.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----------
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQ-----------  189 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----------  189 (249)
                      ..+|.|++|.||++.+..+++.||+|++....... .+.+.+|+.+++.++   |||||+++++|.+.+           
T Consensus        11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~---HpnIV~~~~~~~~~~~~~~~~~~~~~   87 (299)
T 4g31_A           11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE---HPGIVRYFNAWLEKNTTEKLQPSSPK   87 (299)
T ss_dssp             EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEEC----------C
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEecCccccccccCCC
Confidence            56899999999999999999999999997654322 356788999988776   999999999987543           


Q ss_pred             -eEEEEEeccCCCCHHHHHHhcCCCC---HHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         190 -HVYLVMEFCNGGDLADYLVSKGTLS---EDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       190 -~~~lv~e~~~~g~L~~~l~~~~~~~---~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       ++|+|||||+||+|.+++.+++.++   +..++.++.|++.|+.|||       |+||+||||..
T Consensus        88 ~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~  153 (299)
T 4g31_A           88 VYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM  153 (299)
T ss_dssp             EEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             cEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC
Confidence             4799999999999999999876543   4668899999999999999       99999999964

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.91  E-value=1.3e-24  Score=173.35  Aligned_cols=121  Identities=21%  Similarity=0.286  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.||.||++..     ..+++.||||++...... ..+.+.+|+.+++.++   |||||++++++.+.+.+||||
T Consensus        32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~---HpNIV~l~g~~~~~~~~~lV~  108 (308)
T 4gt4_A           32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ---HPNVVCLLGVVTKDQPLSMIF  108 (308)
T ss_dssp             EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCC---CCCCCCcceEEEECCEEEEEE
Confidence            4689999999998863     346789999999754322 2367899999999887   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++|+|.++|..+                +.+++.++..++.||+.||.|||       |+||+||||...
T Consensus       109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~  181 (308)
T 4gt4_A          109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK  181 (308)
T ss_dssp             ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC
Confidence            999999999999753                35899999999999999999999       999999999653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=1.7e-24  Score=186.42  Aligned_cols=120  Identities=20%  Similarity=0.285  Sum_probs=109.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++......+.+.+.+|+.+|+.++   |||||+++++|.+...+|||||||+||
T Consensus       163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~iv~E~~~gg  239 (573)
T 3uto_A          163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR---HPTLVNLHDAFEDDNEMVMIYEFMSGG  239 (573)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTC---CTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCC---CCCCCeEEEEEEECCEEEEEEeecCCC
Confidence            46789999999999999999999999998765555577889999999887   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|+++|.+ .+.+++.+++.|+.|++.||.|||       |+||+|||+..
T Consensus       240 ~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~  290 (573)
T 3uto_A          240 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT  290 (573)
T ss_dssp             BHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC
Confidence            99999975 457999999999999999999999       99999999964

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.91  E-value=1.8e-24  Score=178.30  Aligned_cols=120  Identities=23%  Similarity=0.319  Sum_probs=105.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES------DQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~~l  193 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....  .+.+.+|+.+++.++   |||||++++++..      ...+||
T Consensus        60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~~~~~~~i  136 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK---HDNIIAIKDILRPTVPYGEFKSVYV  136 (398)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSSCTTTCCCEEE
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcC---CCCcceEeeeeecccccccCCEEEE
Confidence            57899999999999999999999999997643222  355778999998887   9999999998764      367999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||||+ |+|.+++.+++.+++.+++.|+.|++.||.|||       |+||+|||+...
T Consensus       137 vmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~  194 (398)
T 4b99_A          137 VLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN  194 (398)
T ss_dssp             EEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             EEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCC
Confidence            999995 689999999889999999999999999999999       999999999653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=1.6e-23  Score=166.61  Aligned_cols=116  Identities=15%  Similarity=0.185  Sum_probs=98.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|++|.||++...   ..||||+++.....  ..+.+.+|+.+++.++   |||||++++++.+ +.+|||||||+
T Consensus        42 ~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~---HpNIV~l~g~~~~-~~~~iVmEy~~  114 (307)
T 3omv_A           42 TRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR---HVNILLFMGYMTK-DNLAIVTQWCE  114 (307)
T ss_dssp             EECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECS-SSCEEEEECCS
T ss_pred             eEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEC-CeEEEEEEcCC
Confidence            46899999999999653   35999998754322  2356888999988776   9999999998754 56899999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.++|... +.+++.++..++.|++.||.|||       |+||+||||..
T Consensus       115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~  167 (307)
T 3omv_A          115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHE  167 (307)
T ss_dssp             SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEET
T ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECC
Confidence            99999999764 57999999999999999999999       99999999964

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.89  E-value=2.8e-23  Score=169.33  Aligned_cols=116  Identities=19%  Similarity=0.278  Sum_probs=101.7

Q ss_pred             ccccCCCCcceeeccCC---CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSP---APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+.   .+++.||+|.+.+...  ...+.+|+.+++.+.  +|||||+++++|.+.+++|+|||||
T Consensus        27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~--~h~nIv~l~~~~~~~~~~~lvmE~~  102 (361)
T 4f9c_A           27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAG--GQDNVMGVKYCFRKNDHVVIAMPYL  102 (361)
T ss_dssp             EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTC--SBTTBCCCSEEEEETTEEEEEEECC
T ss_pred             EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhc--CCCCCceEEEEEEECCEEEEEEeCC
Confidence            56899999999999653   5688999999875432  245778999888774  5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.   .+++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus       103 ~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~  152 (361)
T 4f9c_A          103 EHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR  152 (361)
T ss_dssp             CCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET
T ss_pred             CcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC
Confidence            9999999994   4999999999999999999999       99999999964

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.88  E-value=1.2e-22  Score=164.79  Aligned_cols=122  Identities=20%  Similarity=0.254  Sum_probs=101.5

Q ss_pred             ccccCCCCcceeeccCCC-----CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-----PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv  194 (249)
                      ..+|.|.||.||.+....     +++.||+|.+...... ..+.+.+|+.+++.+.  +|||||+++++|.. ...+|||
T Consensus        70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~--hhpnIV~l~g~~~~~~~~~~iV  147 (353)
T 4ase_A           70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVI  147 (353)
T ss_dssp             EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECCTTSCCEEE
T ss_pred             eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcC--CCCcEEEEEEEEEecCCEEEEE
Confidence            468999999999986433     4568999999765332 2356889999999887  45999999999865 4679999


Q ss_pred             EeccCCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||++|+|.++|++.                ..+++.++..++.||+.||.|||       |+||+|||+...
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~  221 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  221 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC
Confidence            9999999999999863                23889999999999999999999       999999999643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.88  E-value=1.5e-22  Score=161.47  Aligned_cols=116  Identities=16%  Similarity=0.233  Sum_probs=93.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv~e~  197 (249)
                      ..+|.|.+|.||++..  +|+.||||++.....   +.+.+|.++. .+..++|||||++++++.+.+    .+||||||
T Consensus         9 ~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~---~~~~~e~Ei~-~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIY-QTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEECSSSEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHH-TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEE--CCEEEEEEEECccch---hhHHHHHHHH-HHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            4578999999999975  688999999975432   3334444333 222345999999999997643    68999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------------d~kp~nili~~  244 (249)
                      |+||+|.+++++.+ +++..+..++.|++.|+.|||               |+||+||||..
T Consensus        83 ~~~gsL~~~l~~~~-l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~  143 (303)
T 3hmm_A           83 HEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  143 (303)
T ss_dssp             CTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred             CCCCcHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECC
Confidence            99999999998764 999999999999999999997               89999999964

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.87  E-value=2.2e-21  Score=158.66  Aligned_cols=120  Identities=23%  Similarity=0.327  Sum_probs=108.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++...... .+.+.+|+.+++.++   ||||+++++++.+...+|+|||||+||
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~~~~  101 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLR---HPNIVRFKEVILTPTHLAIIMEYASGG  101 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCC---CCCCCcEEEEEeeCCEEEEEEEeCCCC
Confidence            5689999999999999999999999999765432 256788999988877   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus       102 ~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~  152 (361)
T 3uc3_A          102 ELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS  152 (361)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC
Confidence            99999998888999999999999999999999       999999999643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.87  E-value=1.5e-21  Score=157.65  Aligned_cols=120  Identities=28%  Similarity=0.446  Sum_probs=108.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....  .+.+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus        21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~lv~e~~~   97 (328)
T 3fe3_A           21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN---HPNIVKLFEVIETEKTLYLIMEYAS   97 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCEEEEEEECCC
Confidence            56789999999999999999999999998654322  355778998888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+++.+++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus        98 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~  149 (328)
T 3fe3_A           98 GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA  149 (328)
T ss_dssp             TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcC
Confidence            9999999998888999999999999999999999       99999999954

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=1.7e-21  Score=158.71  Aligned_cols=122  Identities=20%  Similarity=0.264  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+...+|..+++.+.  +||||+++++++.+...+|+|||||
T Consensus        29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~--~hp~Iv~l~~~~~~~~~~~lv~E~~  106 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR--NHPFLTQLFCCFQTPDRLFFVMEFV  106 (353)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT--TCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc--CCCceeeEEEEEEeCCEEEEEEeCC
Confidence            5688999999999999999999999999865322   2245677888887763  5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+||||...
T Consensus       107 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~  160 (353)
T 3txo_A          107 NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE  160 (353)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCC
Confidence            99999999999888999999999999999999999       999999999643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.86  E-value=2.2e-21  Score=157.07  Aligned_cols=120  Identities=18%  Similarity=0.230  Sum_probs=106.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ....+.+|..+++.+.   ||||+++++++.+.+.+|+||||+
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lv~E~~   87 (337)
T 1o6l_A           11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFLTALKYAFQTHDRLCFVMEYA   87 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC---CCcCcceEEEEEeCCEEEEEEeCC
Confidence            5678899999999999999999999999875322   2245677888877665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        88 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  140 (337)
T 1o6l_A           88 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK  140 (337)
T ss_dssp             TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999964

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.86  E-value=1.4e-21  Score=159.68  Aligned_cols=121  Identities=25%  Similarity=0.383  Sum_probs=108.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.+.....      .+.+.+|+.+++.+.   ||||+++++++.+...+|+||
T Consensus        18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~lv~   94 (361)
T 2yab_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL---HPNIITLHDVYENRTDVVLIL   94 (361)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC---CcCCCcEEEEEEeCCEEEEEE
Confidence            56788999999999999999999999998754322      245778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++||+|.+++...+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~  151 (361)
T 2yab_A           95 ELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK  151 (361)
T ss_dssp             ECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCT
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCC
Confidence            99999999999998888999999999999999999999       999999999653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.86  E-value=3.3e-21  Score=159.08  Aligned_cols=122  Identities=18%  Similarity=0.306  Sum_probs=108.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++....+++.||+|++.+.....   .+.+.+|..++..+.  +||||++++++|.+...+|+|||||
T Consensus        58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~--~hp~Iv~l~~~~~~~~~~~lV~E~~  135 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYV  135 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHT--TCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcC--CCCCcCeeEEEEEECCEEEEEEEcC
Confidence            56899999999999999999999999998764332   245778888887763  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+||||...
T Consensus       136 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~  189 (396)
T 4dc2_A          136 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE  189 (396)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCC
Confidence            99999999999888999999999999999999999       999999999643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.86  E-value=5.9e-21  Score=152.07  Aligned_cols=119  Identities=19%  Similarity=0.304  Sum_probs=108.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+........+.+.+|+.+++.++   ||||+++++++.+.+.+|+|||||+||
T Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~~~  102 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK---NPNIVNYLDSYLVGDELWVVMEYLAGG  102 (297)
T ss_dssp             EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCC---CCCCCeEeEEEEECCEEEEEEECCCCC
Confidence            56788999999999999999999999998765555567888999988876   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       103 ~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~  151 (297)
T 3fxz_A          103 SLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM  151 (297)
T ss_dssp             BHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECC
Confidence            999999876 4999999999999999999999       99999999964

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.86  E-value=6.2e-22  Score=159.47  Aligned_cols=87  Identities=28%  Similarity=0.472  Sum_probs=76.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+..........+..+++++++||.+||++||++|+|++++++
T Consensus       244 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          244 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            57899999999999999999999999999988877776665544444455678999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||+..
T Consensus       324 Hp~~~~~  330 (346)
T 4fih_A          324 HPFLAKA  330 (346)
T ss_dssp             CGGGGGC
T ss_pred             CHhhcCC
Confidence            9999854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.86  E-value=7.2e-21  Score=152.72  Aligned_cols=121  Identities=21%  Similarity=0.270  Sum_probs=108.8

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      .+|.|.++.||.+.+..+++.||+|++........+.+.+|+.+++.+.  +||||+++++++.+.+.+|+||||++||+
T Consensus        20 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~--~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   97 (316)
T 2ac3_A           20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ--GHRNVLELIEFFEEEDRFYLVFEKMRGGS   97 (316)
T ss_dssp             CCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC--CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             eecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc--CCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence            5788999999999999999999999998765444467888999887743  59999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         203 LADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       203 L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        98 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~  147 (316)
T 2ac3_A           98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHP  147 (316)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCS
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccC
Confidence            9999998888999999999999999999999       999999999643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.86  E-value=4.4e-21  Score=156.15  Aligned_cols=120  Identities=23%  Similarity=0.353  Sum_probs=106.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   .+.+.+|+.+++.+.   ||||+++++++.+...+|+||||+
T Consensus        47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~  123 (350)
T 1rdq_E           47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYV  123 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEcCCEEEEEEcCC
Confidence            56888999999999999999999999998654322   244667777776665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       124 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  176 (350)
T 1rdq_E          124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ  176 (350)
T ss_dssp             TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECC
Confidence            99999999999888999999999999999999999       99999999954

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.86  E-value=5e-21  Score=154.41  Aligned_cols=119  Identities=25%  Similarity=0.308  Sum_probs=107.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+..   .....+|+.+++.+.  +||||+++++++.+....|+||||++||
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCE--GHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTT--TCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhc--CCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            45788999999999999999999999997542   245678888888775  5999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        92 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~  142 (325)
T 3kn6_A           92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE  142 (325)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecC
Confidence            99999999888999999999999999999999       999999999653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.86  E-value=4.3e-21  Score=155.87  Aligned_cols=121  Identities=17%  Similarity=0.179  Sum_probs=107.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc---cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL---AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+...   ...+....|..++..+.  +||||+++++++.+...+|+||||+
T Consensus        23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~--~hp~iv~l~~~~~~~~~~~lv~E~~  100 (345)
T 1xjd_A           23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW--EHPFLTHMFCTFQTKENLFFVMEYL  100 (345)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT--TCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcC--CCCCCCcEEEEEEeCCEEEEEEeCC
Confidence            568899999999999999999999999987532   12245677888887652  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       101 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  153 (345)
T 1xjd_A          101 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK  153 (345)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECC
Confidence            99999999998888999999999999999999999       99999999964

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.85  E-value=4.4e-21  Score=157.76  Aligned_cols=121  Identities=20%  Similarity=0.324  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.+.....   .+.+.+|+.+++.++   ||||++++++|.+...+|+||||+
T Consensus        21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~~~~~~~lv~e~~   97 (384)
T 4fr4_A           21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE---HPFLVNLWYSFQDEEDMFMVVDLL   97 (384)
T ss_dssp             EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCEEEEEEecC
Confidence            57899999999999999999999999998654322   245677888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+||||...
T Consensus        98 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~  151 (384)
T 4fr4_A           98 LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH  151 (384)
T ss_dssp             TTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCC
Confidence            99999999999888999999999999999999999       999999999543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.85  E-value=4.3e-21  Score=154.26  Aligned_cols=120  Identities=17%  Similarity=0.294  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+.+.+|..+++.+.   ||||+++++++.+...+|+||||+
T Consensus        12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~Iv~~~~~~~~~~~~~lv~e~~   88 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT---HPFIIRMWGTFQDAQQIFMIMDYI   88 (318)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC---BTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC---CCCCceEeEEEEeCCEEEEEEeCC
Confidence            5678899999999999999999999999875332   2245667888877665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        89 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  141 (318)
T 1fot_A           89 EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDK  141 (318)
T ss_dssp             CSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcC
Confidence            99999999999888999999999999999999999       99999999954

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.85  E-value=7.9e-22  Score=156.60  Aligned_cols=90  Identities=26%  Similarity=0.343  Sum_probs=78.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHH---
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQ---   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~---   78 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+....   +.+|..+++++++||.+||++||.+|+|+++   
T Consensus       208 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE---YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence            4689999999999999999999999999998887766655443   3456779999999999999999999999876   


Q ss_pred             ---HhcCCCCCCCCCCCCC
Q psy4166          79 ---LFAHPFLQPLAPHPLI   94 (249)
Q Consensus        79 ---i~~~~~~~~~~~~~~~   94 (249)
                         +++||||++++|+.+.
T Consensus       285 ~~~i~~Hp~F~~idw~~l~  303 (311)
T 4aw0_A          285 YGPLKAHPFFESVTWENLH  303 (311)
T ss_dssp             HHHHHTSGGGTTCCCTTGG
T ss_pred             CHHHHCCCCcCCCCHHHhc
Confidence               6899999999988764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.85  E-value=7.8e-21  Score=154.43  Aligned_cols=121  Identities=19%  Similarity=0.310  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   .+.+.+|..+++.+.  +||||+++++++.+...+|+||||+
T Consensus        15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~--~hp~iv~l~~~~~~~~~~~lv~e~~   92 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYV   92 (345)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT--TCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC--CCCccCeEEEEEEeCCEEEEEEeCC
Confidence            56788999999999999999999999998764332   244677888887663  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        93 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  145 (345)
T 3a8x_A           93 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS  145 (345)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC
Confidence            99999999998888999999999999999999999       99999999954

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.85  E-value=8.2e-21  Score=153.21  Aligned_cols=121  Identities=27%  Similarity=0.416  Sum_probs=108.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+......      ..+.+.+|+.+++.++   ||||+++++++.+...+|+||
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~   93 (326)
T 2y0a_A           17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ---HPNVITLHEVYENKTDVILIL   93 (326)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCEEEEEE
Confidence            5678999999999999999999999999865432      1245788999998887   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++||+|.+++...+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~  150 (326)
T 2y0a_A           94 ELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR  150 (326)
T ss_dssp             ECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCS
T ss_pred             EcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecC
Confidence            99999999999998888999999999999999999999       999999999653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.85  E-value=6.8e-21  Score=154.60  Aligned_cols=117  Identities=23%  Similarity=0.337  Sum_probs=105.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+..    ....+|+.++..+.  +||||+++++++.+...+|+|||||+||
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~--~hp~iv~~~~~~~~~~~~~lv~E~~~gg  101 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYG--QHPNIITLKDVYDDGKYVYVVTELMKGG  101 (342)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHT--TSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhc--CCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence            56788999999999999999999999997653    23457888887763  4999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       102 ~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~  151 (342)
T 2qr7_A          102 ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVD  151 (342)
T ss_dssp             BHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESS
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEec
Confidence            99999998888999999999999999999999       99999999854

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.85  E-value=4e-21  Score=159.29  Aligned_cols=119  Identities=21%  Similarity=0.288  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+.+.+|..+++.+.   ||||++++++|.+...+|+|||||
T Consensus        75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~~~~~~~lV~E~~  151 (410)
T 3v8s_A           75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN---SPWVVQLFYAFQDDRYLYMVMEYM  151 (410)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEECCEEEEEEeCC
Confidence            5689999999999999999999999999864322   2245788999988776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+. .+++..++.++.|++.|+.|||       |+||+||||..
T Consensus       152 ~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~  203 (410)
T 3v8s_A          152 PGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK  203 (410)
T ss_dssp             TTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECC
Confidence            999999999865 5999999999999999999999       99999999954

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.85  E-value=5e-21  Score=159.93  Aligned_cols=120  Identities=23%  Similarity=0.320  Sum_probs=107.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++....+++.||+|++.+.....   ...+.+|..++..+.   ||||++++++|.+...+|+|||||
T Consensus        80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~---hp~Iv~l~~~~~~~~~~~lV~Ey~  156 (437)
T 4aw2_A           80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD---SKWITTLHYAFQDDNNLYLVMDYY  156 (437)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC---TTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC---CCCEEEEEEEEeeCCEEEEEEecC
Confidence            57899999999999999999999999998643222   245788999988776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+ .+.+++..++.++.|++.|+.|||       |+||+||||..
T Consensus       157 ~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~  210 (437)
T 4aw2_A          157 VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM  210 (437)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC
Confidence            99999999987 467999999999999999999999       99999999953

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.85  E-value=5.9e-21  Score=156.13  Aligned_cols=120  Identities=21%  Similarity=0.314  Sum_probs=108.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+....|+|||||+
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~lv~e~~~  111 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ---HPNIVRLHDSIQEESFHYLVFDLVT  111 (362)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEeCCEEEEEEecCC
Confidence            46788999999999999999999999998654332  256778999998876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++..++.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       112 gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~  163 (362)
T 2bdw_A          112 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS  163 (362)
T ss_dssp             SCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESC
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence            9999999998888999999999999999999999       99999999964

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=6.9e-21  Score=159.53  Aligned_cols=120  Identities=21%  Similarity=0.297  Sum_probs=107.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.+|+|.+.......  .+.+.+|+.+++.++   ||||+++++++.+.+..|+|||||+
T Consensus        17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~lv~E~~~   93 (444)
T 3soa_A           17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK---HPNIVRLHDSISEEGHHYLIFDLVT   93 (444)
T ss_dssp             EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCC---BTTBCCEEEEEECSSEEEEEECCCB
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC---CcCCCeEEEEEEECCEEEEEEEeCC
Confidence            56889999999999999999999999998654322  356788999998886   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+.+..++.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        94 gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~  145 (444)
T 3soa_A           94 GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLAS  145 (444)
T ss_dssp             CCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESB
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence            9999999999888999999999999999999999       99999999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.85  E-value=9.8e-21  Score=155.26  Aligned_cols=121  Identities=23%  Similarity=0.321  Sum_probs=100.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+......   ..+.+|..++  +..++||||++++++|.+...+|+||||+
T Consensus        44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l--l~~~~hp~Iv~l~~~~~~~~~~~lv~E~~  121 (373)
T 2r5t_A           44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQTADKLYFVLDYI  121 (373)
T ss_dssp             EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC--BCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH--HHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence            568999999999999999999999999987654322   2334444432  23346999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       122 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~  174 (373)
T 2r5t_A          122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS  174 (373)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC
Confidence            99999999999888999999999999999999999       99999999964

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.85  E-value=8.5e-21  Score=157.44  Aligned_cols=120  Identities=22%  Similarity=0.304  Sum_probs=106.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++....+++.||+|++.+....   ..+.+.+|..++..+.   ||||++++++|.+...+|+|||||
T Consensus        67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~---hp~Iv~l~~~~~~~~~~~lVmE~~  143 (412)
T 2vd5_A           67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD---RRWITQLHFAFQDENYLYLVMEYY  143 (412)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC---TTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC---CCCeeeEEEEEeeCCEEEEEEcCC
Confidence            5688999999999999999999999999864322   2245788888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+ .+++..++.++.|++.|+.|||       |+||+||||..
T Consensus       144 ~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~  197 (412)
T 2vd5_A          144 VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR  197 (412)
T ss_dssp             CSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecC
Confidence            9999999998854 6999999999999999999999       99999999964

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.84  E-value=3.4e-21  Score=152.85  Aligned_cols=89  Identities=28%  Similarity=0.389  Sum_probs=77.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+....   +..|..+|+++++||.+||++||.+|+|     +
T Consensus       200 ~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~  276 (304)
T 3ubd_A          200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK---LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV  276 (304)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTH
T ss_pred             cCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC---CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCH
Confidence            5789999999999999999999999999998888766665443   3456779999999999999999999998     5


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      +++++||||+.++|..+
T Consensus       277 ~eil~Hp~f~~idw~~l  293 (304)
T 3ubd_A          277 EEIKRHSFFSTIDWNKL  293 (304)
T ss_dssp             HHHHTSGGGTTCCHHHH
T ss_pred             HHHHcCccccCCCHHHH
Confidence            89999999998877543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=1.3e-20  Score=151.75  Aligned_cols=119  Identities=18%  Similarity=0.237  Sum_probs=106.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.... .+...+.+|+.+++.++   ||||+++++++.+...+|+|||||+||
T Consensus        11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~lv~e~~~g~   86 (321)
T 1tki_A           11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIAR---HRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSC---CTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCC---CCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence            46788999999999999999999999987543 22356788999998876   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+ .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        87 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~  137 (321)
T 1tki_A           87 DIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT  137 (321)
T ss_dssp             BHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc
Confidence            9999998754 6999999999999999999999       99999999975

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.84  E-value=1.7e-20  Score=149.14  Aligned_cols=120  Identities=29%  Similarity=0.351  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.......   .+.+.+|+.+++.++   ||||+++++++.+.+.+|+||||+
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~   93 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS---HQNIVSMIDVDEEDDCYYLVMEYI   93 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC---BTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC---CCCCceEEEeeeeCCeEEEEEeCC
Confidence            56788999999999999999999999987543332   245667777777665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        94 ~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~  146 (294)
T 4eqm_A           94 EGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS  146 (294)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            99999999999888999999999999999999999       99999999954

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.84  E-value=1.2e-20  Score=151.18  Aligned_cols=121  Identities=17%  Similarity=0.261  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+........+.+.+|+.+++.++   ||||+++++++.+....|+||||++||
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~~~   92 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE---HPNVLKFIGVLYKDKRLNFITEYIKGG   92 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC---CcCcccEEEEEecCCeeEEEEEecCCC
Confidence            46789999999999999999999999986654444466888988888776   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.. .+.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus        93 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~  144 (310)
T 3s95_A           93 TLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVREN  144 (310)
T ss_dssp             BHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTT
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCC
Confidence            99999988 456999999999999999999999       999999999643

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.84  E-value=3.8e-21  Score=158.63  Aligned_cols=87  Identities=28%  Similarity=0.472  Sum_probs=77.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++|||||||++|||++|++||.+.+..++...+..........+..+++++++||.+||++||.+|+++.++++
T Consensus       321 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          321 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            57899999999999999999999999999988887776666554444556679999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       401 Hp~~~~~  407 (423)
T 4fie_A          401 HPFLAKA  407 (423)
T ss_dssp             CGGGGGC
T ss_pred             CHHhcCC
Confidence            9999854

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.84  E-value=1e-20  Score=154.16  Aligned_cols=120  Identities=25%  Similarity=0.391  Sum_probs=105.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.++.||.+.+..+++.||+|++......     ..+.+.+|+.+++.++   ||||+++++++.+.+.+|+|||
T Consensus        30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~lv~e  106 (351)
T 3c0i_A           30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK---HPHIVELLETYSSDGMLYMVFE  106 (351)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEE
T ss_pred             eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCEEEEEEe
Confidence            5688999999999999999999999999754321     2356789999998876   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+||+|.+++.+.    ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       107 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~  165 (351)
T 3c0i_A          107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS  165 (351)
T ss_dssp             CCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECS
T ss_pred             CCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEec
Confidence            99999999888653    24899999999999999999999       99999999964

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.84  E-value=1.7e-20  Score=154.93  Aligned_cols=120  Identities=18%  Similarity=0.223  Sum_probs=106.5

Q ss_pred             ccccCC--CCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTS--PPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g--~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|  .++.||++.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+...+|+||||
T Consensus        31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~  107 (389)
T 3gni_B           31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN---HPNIVPYRATFIADNELWVVTSF  107 (389)
T ss_dssp             EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCC---CCCCCcEeEEEEECCEEEEEEEc
Confidence            456777  89999999999999999999998654322  245778999888877   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |++|+|.+++...  +.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~  163 (389)
T 3gni_B          108 MAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV  163 (389)
T ss_dssp             CTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             cCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            9999999999876  56999999999999999999999       99999999964

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.84  E-value=8.8e-21  Score=156.28  Aligned_cols=120  Identities=18%  Similarity=0.257  Sum_probs=107.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+......+...+.+|+.+++.++   ||||+++++++.+...+|+|||||+||
T Consensus        57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~lv~E~~~gg  133 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH---HPKLINLHDAFEDKYEMVLILEFLSGG  133 (387)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC---STTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCC---CcCCCeEEEEEEeCCEEEEEEEcCCCC
Confidence            56788999999999999999999999998654444456788998888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+ .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       134 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~  184 (387)
T 1kob_A          134 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET  184 (387)
T ss_dssp             BHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             cHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec
Confidence            9999998654 6999999999999999999999       99999999963

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.84  E-value=1e-20  Score=154.05  Aligned_cols=121  Identities=17%  Similarity=0.203  Sum_probs=106.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+.+..|..++..+.  +||||+++++++.+...+|+||||+
T Consensus        26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~--~hp~iv~l~~~~~~~~~~~lv~E~~  103 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYV  103 (353)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT--CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC--CCCEEeeEEEEEEcCCEEEEEEeCC
Confidence            5678899999999999999999999999875332   2244667777776553  5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       104 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~  156 (353)
T 2i0e_A          104 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS  156 (353)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcC
Confidence            99999999998888999999999999999999999       99999999954

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.84  E-value=3.2e-21  Score=152.21  Aligned_cols=84  Identities=25%  Similarity=0.424  Sum_probs=67.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .+|+.++|||||||++|||++|++||.+.+.. .+...+... ..++..+...++++++||.+||+.||.+|||++++++
T Consensus       204 ~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT-CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC-CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            46999999999999999999999999875543 333333322 2233445668899999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||++
T Consensus       283 Hp~~~~  288 (290)
T 3fpq_A          283 HAFFQE  288 (290)
T ss_dssp             SGGGC-
T ss_pred             CccccC
Confidence            999984

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.84  E-value=1.4e-20  Score=154.58  Aligned_cols=120  Identities=23%  Similarity=0.357  Sum_probs=102.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+....+++.||+|++........+.+.+|+.+++.++   ||||+++++++.+...+|+||||++||
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD---HANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCC---CCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            35789999999999998999999999998765444567888998888776   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  222 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN  222 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec
Confidence            999999765 35999999999999999999999       99999999954

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.83  E-value=7.6e-21  Score=153.19  Aligned_cols=120  Identities=26%  Similarity=0.400  Sum_probs=106.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||++.+..+++.||+|++......+ .+.+.+|+.+++.++   ||||+++++++.+....|+|||||+|
T Consensus        13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~lv~e~~~~   89 (323)
T 3tki_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN---HENVVKFYGHRREGNIQYLFLEYCSG   89 (323)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCC---CCCCCeEEEEEecCCeEEEEEEcCCC
Confidence            56888999999999999999999999997544322 366889999998887   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++...+.+++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~  140 (323)
T 3tki_A           90 GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE  140 (323)
T ss_dssp             EEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeC
Confidence            999999988878999999999999999999999       99999999965

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.83  E-value=3.1e-20  Score=147.07  Aligned_cols=119  Identities=15%  Similarity=0.064  Sum_probs=102.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||.+.+..+++.||+|.+.......   .+.+.+|+..+..+.   ||||+++++++.+.+..|+||||+
T Consensus        37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~  113 (286)
T 3uqc_A           37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID---KPGVARVLDVVHTRAGGLVVAEWI  113 (286)
T ss_dssp             EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC---CCCcceeeEEEEECCcEEEEEEec
Confidence            56788999999999999999999999998654332   245677877776665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|++|.+++.+ + ....++..++.|++.|+.|||       |+||+|||+...
T Consensus       114 ~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~  165 (286)
T 3uqc_A          114 RGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSID  165 (286)
T ss_dssp             CEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETT
T ss_pred             CCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCC
Confidence            99999999964 3 466678889999999999999       999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.83  E-value=3.7e-20  Score=145.82  Aligned_cols=119  Identities=28%  Similarity=0.464  Sum_probs=109.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.||.+.+..++..+|+|++........+.+.+|+.+++.++   ||||+++++++.+....|+||||++|+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   91 (277)
T 3f3z_A           15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD---HPNIIRLYETFEDNTDIYLVMELCTGG   91 (277)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCC---CCCEeeEEEEEecCCeEEEEEeccCCC
Confidence            46788999999999999999999999998765555577888999998876   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +|.+++...+.+++..+..++.|++.|+.|||       |+||+||++.
T Consensus        92 ~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~  140 (277)
T 3f3z_A           92 ELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL  140 (277)
T ss_dssp             BHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEe
Confidence            99999998888999999999999999999999       9999999994

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.83  E-value=2.6e-20  Score=157.15  Aligned_cols=121  Identities=21%  Similarity=0.383  Sum_probs=108.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+.....   ...+.+|+.+++.++   ||||+++++++.+...+|+|||||
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~lv~E~~   98 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR---HPHIIKLYQVISTPSDIFMVMEYV   98 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEeCC
Confidence            56889999999999999999999999998654322   245778888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+++.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        99 ~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~  152 (476)
T 2y94_A           99 SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAH  152 (476)
T ss_dssp             SSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecC
Confidence            99999999998888999999999999999999999       999999999643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.83  E-value=3.6e-20  Score=157.85  Aligned_cols=121  Identities=24%  Similarity=0.340  Sum_probs=105.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-------------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-------------KTQNFGKEINILKELTELHHENVVELLHCKESD  188 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~  188 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....             ..+.+.+|+.+++.++   ||||+++++++.+.
T Consensus        42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~  118 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD---HPNIIKLFDVFEDK  118 (504)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC---CTTBCCEEEEEECS
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEEcC
Confidence            5689999999999999999999999999865322             1245778888888876   99999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         189 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       189 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ..+|+|||||+||+|.+++...+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus       119 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  182 (504)
T 3q5i_A          119 KYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK  182 (504)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESST
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecC
Confidence            999999999999999999998888999999999999999999999       999999999754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.83  E-value=3.9e-20  Score=157.02  Aligned_cols=120  Identities=23%  Similarity=0.327  Sum_probs=108.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....  ....+.+|+.+++.++   ||||+++++++.+...+|+|||||+
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~~  104 (486)
T 3mwu_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD---HPNIMKLFEILEDSSSFYIVGELYT  104 (486)
T ss_dssp             EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCC---CCCcCeEEEEEEcCCEEEEEEEcCC
Confidence            5789999999999999999999999999764322  2356788999998886   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       105 ~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~  156 (486)
T 3mwu_A          105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES  156 (486)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESS
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence            9999999998888999999999999999999999       99999999953

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.83  E-value=3.2e-20  Score=149.42  Aligned_cols=119  Identities=21%  Similarity=0.320  Sum_probs=106.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+....+++.||+|++........+.+.+|+.+++.++   ||||+++++++......|+||||++||
T Consensus        51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~  127 (321)
T 2c30_A           51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ---HFNVVEMYKSYLVGEELWVLMEFLQGG  127 (321)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC---CCCcceEEEEEEECCEEEEEEecCCCC
Confidence            35788999999999998899999999998665544566788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+. .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       128 ~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          128 ALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL  176 (321)
T ss_dssp             BHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence            999998765 5999999999999999999999       99999999964

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.83  E-value=3.8e-20  Score=157.38  Aligned_cols=120  Identities=24%  Similarity=0.349  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..++..||+|++.+....  ....+.+|+.+++.++   ||||+++++++.+...+|+|||||+
T Consensus        43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~~  119 (494)
T 3lij_A           43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD---HPNIMKLYDFFEDKRNYYLVMECYK  119 (494)
T ss_dssp             EEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCC---CCCCCeEEEEEEeCCEEEEEEecCC
Confidence            5689999999999999999999999999865432  2356778888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       120 ~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  171 (494)
T 3lij_A          120 GGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES  171 (494)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeC
Confidence            9999999998888999999999999999999999       99999999964

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.83  E-value=5.6e-20  Score=146.80  Aligned_cols=119  Identities=28%  Similarity=0.457  Sum_probs=105.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.+|.+.+..+++.||+|.+........+.+.+|+.+++.++   ||||+++++++.+...+|+||||++||
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   91 (304)
T 2jam_A           15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK---HENIVTLEDIYESTTHYYLVMQLVSGG   91 (304)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCC---CCCeeehhhhcccCCEEEEEEEcCCCc
Confidence            56788999999999998899999999998654444456788999998876   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +|.+++...+.+++..+..++.|++.|+.|||       |+||+||++.
T Consensus        92 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~  140 (304)
T 2jam_A           92 ELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYL  140 (304)
T ss_dssp             BHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEES
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEe
Confidence            99999998888999999999999999999999       9999999984

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.82  E-value=3.7e-20  Score=150.75  Aligned_cols=118  Identities=24%  Similarity=0.305  Sum_probs=101.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+....+++.||+|++....  ..+.+.+|+.+++.+.   ||||+++++++.+....|+||||++||
T Consensus        59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~  133 (349)
T 2w4o_A           59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLS---HPNIIKLKEIFETPTEISLVLELVTGG  133 (349)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCC---CTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCC---CCCCcceeeeEecCCeEEEEEEeCCCC
Confidence            56788999999999999999999999997643  2356778999998887   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       134 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~  183 (349)
T 2w4o_A          134 ELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT  183 (349)
T ss_dssp             BHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESS
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEec
Confidence            99999998888999999999999999999999       99999999964

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.82  E-value=1.1e-20  Score=152.42  Aligned_cols=85  Identities=27%  Similarity=0.403  Sum_probs=74.3

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      .+.+|+.++||||+||++|||++|++||.+.+..++...+....  .+..+..+++++++||.+||++||.+||++++++
T Consensus       198 ~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l  275 (350)
T 4b9d_A          198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL  275 (350)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            36789999999999999999999999999998887766555443  2345677999999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||..
T Consensus       276 ~hp~~~~  282 (350)
T 4b9d_A          276 EKGFIAK  282 (350)
T ss_dssp             TSHHHHT
T ss_pred             cCHHhhc
Confidence            9999974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.82  E-value=8.1e-20  Score=146.87  Aligned_cols=119  Identities=23%  Similarity=0.295  Sum_probs=103.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--eEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQ--HVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+....+++.||+|++....... .+.+.+|+.+++.++   ||||+++++++....  ..|+||||+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv~e~~   91 (319)
T 4euu_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN---HKNIVKLFAIEEETTTRHKVLIMEFC   91 (319)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC---CTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC---CCCcceEEEEeecCCCceEEEEEeCC
Confidence            56788999999999999999999999997644322 355678888888876   999999999998755  889999999


Q ss_pred             CCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         199 NGGDLADYLVSKGT---LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       199 ~~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +||+|.+++...+.   +++.++..++.|++.|+.|||       |+||+|||+.
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  146 (319)
T 4euu_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV  146 (319)
T ss_dssp             TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEe
Confidence            99999999987543   999999999999999999999       9999999983

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.82  E-value=3.6e-20  Score=149.51  Aligned_cols=121  Identities=24%  Similarity=0.325  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCC---CCCCeeEEEEeeccccc----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP---APSQHVAIKRITKKNLA----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~~~----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.+|.||.+...   .+++.||+|++.+....    ....+.+|+.+++.+.   ||||+++++++.+.+.+|+|
T Consensus        23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv   99 (327)
T 3a62_A           23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK---HPFIVDLIYAFQTGGKLYLI   99 (327)
T ss_dssp             EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC---CTTBCCEEEEEECSSCEEEE
T ss_pred             EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC---CCCccceeEEEEcCCEEEEE
Confidence            56788999999988764   68999999999765321    2245678888888876   99999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++||+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~  157 (327)
T 3a62_A          100 LEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ  157 (327)
T ss_dssp             EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT
T ss_pred             EeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCC
Confidence            999999999999998888999999999999999999999       999999999643

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.82  E-value=2.3e-20  Score=151.08  Aligned_cols=120  Identities=27%  Similarity=0.413  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   ...+.+|+.+++.++   ||||+++++++.+...+|+||||+
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~lv~E~~   91 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR---HPHIIKLYDVITTPTDIVMVIEYA   91 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC---CCCCCeEEEEEEeCCEEEEEEECC
Confidence            46788999999999999999999999998653222   245778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       +|+|.+++.+.+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        92 -~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~  144 (336)
T 3h4j_B           92 -GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN  144 (336)
T ss_dssp             -CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTT
T ss_pred             -CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCC
Confidence             7899999998888999999999999999999999       999999999754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.82  E-value=6.6e-20  Score=147.55  Aligned_cols=121  Identities=26%  Similarity=0.386  Sum_probs=108.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.......      .+.+.+|+.+++.+.   ||||+++++++.+...+|+||
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~   94 (321)
T 2a2a_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL---HHNVITLHDVYENRTDVVLIL   94 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEE
T ss_pred             eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCEEEEEE
Confidence            46788999999999999999999999998654322      245788999988876   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++||+|.+++...+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~  151 (321)
T 2a2a_A           95 ELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK  151 (321)
T ss_dssp             CCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCT
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecC
Confidence            99999999999998888999999999999999999999       999999999653

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.82  E-value=1e-19  Score=143.87  Aligned_cols=121  Identities=24%  Similarity=0.287  Sum_probs=105.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.++.+|.+.+..+++.||+|.+.......  ...+.+|+..+..+.  +||||+++++++.+.+..|+||||++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~--~h~~iv~~~~~~~~~~~~~lv~e~~~   94 (289)
T 1x8b_A           17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG--QHSHVVRYFSAWAEDDHMLIQNEYCN   94 (289)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSC--SCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhC--CCCCeeeeeeeeecCCeEEEEEEecC
Confidence            56788999999999999999999999998643222  345677777777662  49999999999999999999999999


Q ss_pred             CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++.+.    +.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        95 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~  150 (289)
T 1x8b_A           95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR  150 (289)
T ss_dssp             TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-
T ss_pred             CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcC
Confidence            99999999875    56999999999999999999999       99999999963

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.82  E-value=8.2e-20  Score=145.30  Aligned_cols=122  Identities=22%  Similarity=0.341  Sum_probs=107.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc---------cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL---------AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVY  192 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~  192 (249)
                      ..+|.|.++.||.+.+..+++.||+|.+.....         ...+.+.+|+.+++.+.  +||||+++++++.+....|
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~h~~i~~~~~~~~~~~~~~  100 (298)
T 1phk_A           23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS--GHPNIIQLKDTYETNTFFF  100 (298)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT--TCTTBCCEEEEEECSSEEE
T ss_pred             eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc--CCCCEeeeeeeeccCCeEE
Confidence            567889999999999999999999999975431         11245678888888774  5999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       193 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||||+++|+|.+++..++.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       101 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~  160 (298)
T 1phk_A          101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD  160 (298)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCC
Confidence            99999999999999998888999999999999999999999       999999999643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.82  E-value=6e-20  Score=157.41  Aligned_cols=120  Identities=22%  Similarity=0.208  Sum_probs=106.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+.....   ...+.+|+.+++.+.   ||||+++++++.+...+|+|||||
T Consensus       190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~---hp~Iv~l~~~~~~~~~l~lVmEy~  266 (576)
T 2acx_A          190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN---SRFVVSLAYAYETKDALCLVLTLM  266 (576)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC---CCCEeeEEEEEeeCCEEEEEEEcC
Confidence            46788999999999999999999999998754322   244678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++...+.  +++..++.++.|++.|+.|||       |+||+||||..
T Consensus       267 ~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~  321 (576)
T 2acx_A          267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD  321 (576)
T ss_dssp             CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeC
Confidence            99999999987643  999999999999999999999       99999999964

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=3.1e-20  Score=156.01  Aligned_cols=121  Identities=20%  Similarity=0.225  Sum_probs=100.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   ...+.+|+.+++.+.   ||||+++++++.+.+.+|+|||||
T Consensus       154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~l~~~~~~~~~~~lv~e~~  230 (446)
T 4ejn_A          154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFLTALKYSFQTHDRLCFVMEYA  230 (446)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS---CTTSCCEEEEEEETTEEEEEECCC
T ss_pred             EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC---CCeEeeEEEEEeeCCEEEEEEeeC
Confidence            56888999999999999999999999998653222   234556666665554   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.||.|||        |+||+||||...
T Consensus       231 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~  285 (446)
T 4ejn_A          231 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD  285 (446)
T ss_dssp             SSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSS
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCC
Confidence            99999999998888999999999999999999999        899999999643

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.82  E-value=1.7e-20  Score=150.62  Aligned_cols=88  Identities=18%  Similarity=0.253  Sum_probs=74.0

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH-
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL-   79 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i-   79 (249)
                      .+.+|+.++||||+||++|||++|++||.+.+..++...+..........|..+++++.+||.+||++||.+|||+.|+ 
T Consensus       229 ~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~  308 (336)
T 4g3f_A          229 MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELR  308 (336)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence            3678999999999999999999999999988776665555554444445677899999999999999999999999997 


Q ss_pred             ------------hcCCCCCCC
Q psy4166          80 ------------FAHPFLQPL   88 (249)
Q Consensus        80 ------------~~~~~~~~~   88 (249)
                                  ++|||+.+.
T Consensus       309 ~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          309 RKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             HHHHHHHHHTTSSCSCSSSSC
T ss_pred             HHHHHHHhhhhhccCCCcCCC
Confidence                        568998754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.82  E-value=3.7e-20  Score=146.65  Aligned_cols=121  Identities=13%  Similarity=0.123  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCC-------CeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS-------QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.+|.||.+.+..++       ..||+|.+........+.+.+|+.+++.++   ||||+++++++.+....|+|
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv   90 (289)
T 4fvq_A           14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS---HKHLVLNYGVCVCGDENILV   90 (289)
T ss_dssp             EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSC---CTTBCCEEEEECCTTCCEEE
T ss_pred             eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCC---CCCEeEEEEEEEeCCCCEEE
Confidence            46788999999999877666       469999997665555567888999888876   99999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGT-LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++||+|.+++.+.+. +++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  149 (289)
T 4fvq_A           91 QEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIRE  149 (289)
T ss_dssp             EECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEEC
T ss_pred             EECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecC
Confidence            999999999999988654 999999999999999999999       999999999654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.82  E-value=1.1e-19  Score=155.15  Aligned_cols=121  Identities=21%  Similarity=0.181  Sum_probs=106.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....   .+.+.+|..+++.+.   ||||++++++|.+...+|+||||+
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~---hp~Iv~l~~~~~~~~~l~lVmE~~  267 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH---SRFIVSLAYAFETKTDLCLVMTIM  267 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC---CCCEeeEEEEEeeCCEEEEEEEec
Confidence            45789999999999999999999999998754332   245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...+    .+++..++.++.|++.|+.|||       |+||+||||...
T Consensus       268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~  325 (543)
T 3c4z_A          268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD  325 (543)
T ss_dssp             TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC
Confidence            9999999998643    5999999999999999999999       999999999643

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.82  E-value=2.2e-20  Score=146.22  Aligned_cols=83  Identities=23%  Similarity=0.382  Sum_probs=71.5

Q ss_pred             CCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKY-DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y-~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+| +.++||||+||++|||++|++||.+.+..++...+....   +..|..+|+++++||.+||+.||.+|||+++++
T Consensus       185 ~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil  261 (275)
T 3hyh_A          185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV---YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM  261 (275)
T ss_dssp             SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence            4566 579999999999999999999999988877766555433   345677999999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||+.
T Consensus       262 ~hpw~k~  268 (275)
T 3hyh_A          262 QDDWFKV  268 (275)
T ss_dssp             HCHHHHT
T ss_pred             cCccccc
Confidence            9999963

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.81  E-value=1.3e-19  Score=153.72  Aligned_cols=119  Identities=25%  Similarity=0.374  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....   ..+.+.+|+.+++.++   ||||+++++++.+...+|+|||||
T Consensus        32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~  108 (484)
T 3nyv_A           32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD---HPNIMKLYEFFEDKGYFYLVGEVY  108 (484)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCEEEEEEecC
Confidence            4678899999999999999999999999765432   2356788888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      .||+|.+++...+.+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus       109 ~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~  160 (484)
T 3nyv_A          109 TGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLE  160 (484)
T ss_dssp             CSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEe
Confidence            99999999998888999999999999999999999       9999999994

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.81  E-value=8.2e-20  Score=149.55  Aligned_cols=120  Identities=13%  Similarity=0.104  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeec-----cCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLL-----LSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||++     .+..+++.||+|++....   ...+.+|..+++.+....|+||+++++++...+..|+|||
T Consensus        71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e  147 (365)
T 3e7e_A           71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE  147 (365)
T ss_dssp             EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred             EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence            46789999999999     466789999999997543   2567788888888776679999999999999999999999


Q ss_pred             ccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVS-----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+||+|.+++..     .+.+++..+..++.|++.||.|||       |+||+||||..
T Consensus       148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~  207 (365)
T 3e7e_A          148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN  207 (365)
T ss_dssp             CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECG
T ss_pred             ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecc
Confidence            9999999999984     456999999999999999999999       99999999975

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.81  E-value=4.6e-20  Score=148.96  Aligned_cols=119  Identities=23%  Similarity=0.339  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.++.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~  116 (329)
T 3gbz_A           40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ---HRNIIELKSVIHHNHRLHLIFEYAE  116 (329)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCC---CTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcC---CCCcceEEEEEecCCEEEEEEecCC
Confidence            56788999999999999999999999997553322  245668888887776   9999999999999999999999997


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                       |+|.+++.+.+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       117 -~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~  167 (329)
T 3gbz_A          117 -NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSV  167 (329)
T ss_dssp             -EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC
T ss_pred             -CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEec
Confidence             599999999888999999999999999999999       99999999953

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.81  E-value=2e-19  Score=142.12  Aligned_cols=120  Identities=21%  Similarity=0.314  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+....|+||||++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~   88 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ---HPNIVRLHDSIQEESFHYLVFDLVT   88 (284)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcC---CCCcCeEEEEEEcCCEEEEEEecCC
Confidence            56788999999999999999999999997654332  245678888888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+.+..++.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        89 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~  140 (284)
T 3kk8_A           89 GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS  140 (284)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESS
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEec
Confidence            9999999998888999999999999999999999       99999999964

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.81  E-value=2.2e-19  Score=141.75  Aligned_cols=121  Identities=28%  Similarity=0.435  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.++.||.+.+..+++.||+|.+.......      .+.+.+|+.+++.+.   ||||+++++++.+....|+||
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~   87 (283)
T 3bhy_A           11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR---HPNIITLHDIFENKTDVVLIL   87 (283)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEE
T ss_pred             HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC---CCCeeehhheecCCCeEEEEE
Confidence            46788999999999999999999999997653321      245788999988876   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~  144 (283)
T 3bhy_A           88 ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDK  144 (283)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS
T ss_pred             eecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecC
Confidence            99999999999998888999999999999999999999       999999999653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.81  E-value=3.5e-20  Score=148.50  Aligned_cols=121  Identities=19%  Similarity=0.262  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv  194 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++......+.   ..+.+|+.+++.+   +||||+++++++....    .+|+|
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~~~~~~~~~~~~~~~~~lv   94 (311)
T 3ork_A           18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL---NHPAIVAVYDTGEAETPAGPLPYIV   94 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC---CCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC---CCCCcceEEEeeeccCCCCcccEEE
Confidence            567889999999999989999999999986543332   3455666665555   5999999999987644    35999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++||+|.+++...+.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus        95 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~  152 (311)
T 3ork_A           95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT  152 (311)
T ss_dssp             EECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETT
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCC
Confidence            999999999999998888999999999999999999999       999999999643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.81  E-value=1.9e-19  Score=145.24  Aligned_cols=120  Identities=16%  Similarity=0.220  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----------
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQ-----------  189 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----------  189 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++...... ..+.+.+|+.+++.++   ||||++++++|.+..           
T Consensus        12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~~~~~~~~~   88 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE---HPGIVRYFNAWLETPPEKWQEEMDEI   88 (332)
T ss_dssp             EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCC---CTTBCCEEEEEEECCSCHHHHHHHC-
T ss_pred             eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCC---CCCEeeEEEEEEEeccchhhhhhhhh
Confidence            5678999999999999999999999999754322 2356788998888776   999999999986543           


Q ss_pred             ----------------------------------------------eEEEEEeccCCCCHHHHHHhcCC---CCHHHHHH
Q psy4166         190 ----------------------------------------------HVYLVMEFCNGGDLADYLVSKGT---LSEDTIRI  220 (249)
Q Consensus       190 ----------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~  220 (249)
                                                                    .+|+|||||+||+|.+++.+.+.   .++..+..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  168 (332)
T 3qd2_B           89 WLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLH  168 (332)
T ss_dssp             -------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHH
T ss_pred             hhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHH
Confidence                                                          38999999999999999998653   45567899


Q ss_pred             HHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         221 FLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       221 ~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++.|++.|+.|||       |+||+|||+..
T Consensus       169 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  199 (332)
T 3qd2_B          169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM  199 (332)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             HHHHHHHHHHHHHhCCeeecCCCcccEEEeC
Confidence            9999999999999       99999999964

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.81  E-value=2.2e-19  Score=142.13  Aligned_cols=120  Identities=27%  Similarity=0.429  Sum_probs=106.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||++.+..++..+|+|++...... ..+.+.+|+.+++.++   ||||+++++++.+....|+||||++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~~  104 (285)
T 3is5_A           28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD---HPNIIKIFEVFEDYHNMYIVMETCEG  104 (285)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEECCCSC
T ss_pred             ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCC---CchHHhHHHheecCCeEEEEEEeCCC
Confidence            5678899999999999999999999999865432 2356788999888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSK----GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++...    +.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       105 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~  159 (285)
T 3is5_A          105 GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD  159 (285)
T ss_dssp             CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS
T ss_pred             CcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec
Confidence            9999999653    56999999999999999999999       99999999954

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.81  E-value=1.2e-19  Score=144.12  Aligned_cols=120  Identities=28%  Similarity=0.393  Sum_probs=102.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  ...+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~   84 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK---HKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCC---CCCEeeEEeEEEeCCEEEEEEecCC
Confidence            46788999999999999999999999998654322  245667888877766   9999999999999999999999997


Q ss_pred             CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      + +|.+.+.. .+.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        85 ~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~  137 (292)
T 3o0g_A           85 Q-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN  137 (292)
T ss_dssp             E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence            6 66666654 567999999999999999999999       999999999654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.81  E-value=9.7e-20  Score=150.84  Aligned_cols=115  Identities=17%  Similarity=0.281  Sum_probs=100.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e~~  198 (249)
                      .+|.|.+|.||.+.+..+++.||+|++...     ....+|+.++..+.  +||||++++++|..    ...+|+|||||
T Consensus        69 ~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~--~hp~iv~l~~~~~~~~~~~~~~~lv~E~~  141 (400)
T 1nxk_A           69 VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRAS--QCPHIVRIVDVYENLYAGRKCLLIVMECL  141 (400)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHT--TSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             eeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhc--CCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence            578899999999999999999999999643     45678888875543  59999999999876    66799999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++...+  .+++.+++.++.|++.||.|||       |+||+|||+..
T Consensus       142 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~  196 (400)
T 1nxk_A          142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS  196 (400)
T ss_dssp             CSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             CCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEec
Confidence            9999999998754  5999999999999999999999       99999999975

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.81  E-value=1.4e-19  Score=158.96  Aligned_cols=122  Identities=17%  Similarity=0.201  Sum_probs=107.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+.+..|..++..+.  +||||+++++++.+.+.+|+||||+
T Consensus       347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~--~~~~i~~l~~~~~~~~~~~lV~E~~  424 (674)
T 3pfq_A          347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYV  424 (674)
T ss_dssp             EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT--CCTTBCCEEEECBCSSEEEEEEECC
T ss_pred             EEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc--CCCeEEEEEEEEEeCCEEEEEEeCc
Confidence            4689999999999999999999999999865322   2244667777776654  5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++..++.++.|++.||.|||       |+||+||||...
T Consensus       425 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~  478 (674)
T 3pfq_A          425 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE  478 (674)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC
Confidence            99999999999888999999999999999999999       999999999643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.81  E-value=3.9e-19  Score=143.56  Aligned_cols=119  Identities=19%  Similarity=0.144  Sum_probs=105.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.....  .+.+.+|+.+++.+.  +||||+++++++......|+||||+ +|
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~--~h~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLG--SGDGIPQVYYFGPCGKYNAMVLELL-GP   89 (330)
T ss_dssp             EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHC--SCTTSCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhh--CCCCCCEEEEEEecCCccEEEEEeC-CC
Confidence            467899999999999989999999999875432  356889999999983  3999999999999999999999999 99


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~  141 (330)
T 2izr_A           90 SLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP  141 (330)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG
T ss_pred             CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccC
Confidence            999999874 57999999999999999999999       999999999754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.81  E-value=6.3e-20  Score=145.83  Aligned_cols=121  Identities=20%  Similarity=0.288  Sum_probs=104.5

Q ss_pred             ccccCCCCcceeecc----CCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL----SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.    +..+++.||+|++........+.+.+|+.+++.++   ||||+++++++..  ...+|+||
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv~   92 (295)
T 3ugc_A           16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGRRNLKLIM   92 (295)
T ss_dssp             EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEECHHHHTSCEEEE
T ss_pred             heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEecCCCCceEEEE
Confidence            467889999999887    66789999999997654444466788999988876   9999999999865  45699999


Q ss_pred             eccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~  150 (295)
T 3ugc_A           93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE  150 (295)
T ss_dssp             ECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             EeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCC
Confidence            9999999999998754 4999999999999999999999       999999999754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.81  E-value=1.1e-19  Score=153.25  Aligned_cols=120  Identities=23%  Similarity=0.280  Sum_probs=95.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-----CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKES-----DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-----~~~~~lv  194 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....  ..+.+.+|+.+++.++   ||||+++++++..     ...+|+|
T Consensus        59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv  135 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN---HDHVVKVLDIVIPKDVEKFDELYVV  135 (458)
T ss_dssp             CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSCTTTCCCEEEE
T ss_pred             eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCC---CCCCCceEEEEecCCcccCceEEEE
Confidence            5688999999999999999999999999754222  2356788999998886   9999999999844     3579999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+ +|+|.+++...+.+++..++.++.|++.||.|||       |+||+||||...
T Consensus       136 ~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~  192 (458)
T 3rp9_A          136 LEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD  192 (458)
T ss_dssp             ECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             Eecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCC
Confidence            9998 5799999998888999999999999999999999       999999999643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=149.92  Aligned_cols=119  Identities=23%  Similarity=0.291  Sum_probs=103.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--eEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQ--HVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++....... .+.+.+|+.+++.++   ||||+++++++....  ..|+|||||
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~~~lv~e~~   91 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN---HKNIVKLFAIEEETTTRHKVLIMEFC   91 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC---CTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC---CCCCCeEEEeeccCCCCeeEEEEecC
Confidence            46788999999999999999999999997644322 355678888888876   999999999998755  789999999


Q ss_pred             CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         199 NGGDLADYLVSKG---TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       199 ~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +||+|.+++.+.+   .+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus        92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  146 (396)
T 4eut_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV  146 (396)
T ss_dssp             TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEe
Confidence            9999999998653   2999999999999999999999       9999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=148.53  Aligned_cols=120  Identities=15%  Similarity=0.185  Sum_probs=101.8

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||++.     +..+++.||+|++...... ....+.+|+.+++.++   ||||+++++++.+....|+||
T Consensus        77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~lv~  153 (367)
T 3l9p_A           77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN---HQNIVRCIGVSLQSLPRFILL  153 (367)
T ss_dssp             EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCC---CCCCCeEEEEEecCCCCEEEE
Confidence            467899999999988     4567889999999654222 2345778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG-------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+||+|.+++...+       .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       154 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  216 (367)
T 3l9p_A          154 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC  216 (367)
T ss_dssp             ECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred             EeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEec
Confidence            9999999999998753       4899999999999999999999       99999999974

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.80  E-value=1e-19  Score=151.61  Aligned_cols=118  Identities=25%  Similarity=0.455  Sum_probs=103.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeeccccc--------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      .+|.|.+|.||++.+..+++.||+|++.+....        ....+.+|+.+++.++   ||||+++++++.. ...|+|
T Consensus       142 ~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~-~~~~lv  217 (419)
T 3i6u_A          142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDA-EDYYIV  217 (419)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC---CTTBCCCCEEEES-SEEEEE
T ss_pred             EEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC---CCCEeeEEEEEec-CceEEE
Confidence            478899999999999999999999999865321        1235788999998886   9999999999764 568999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||++|+|.+++...+.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       218 ~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~  274 (419)
T 3i6u_A          218 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS  274 (419)
T ss_dssp             EECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred             EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence            999999999999988888999999999999999999999       99999999964

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.80  E-value=2.3e-19  Score=145.22  Aligned_cols=121  Identities=21%  Similarity=0.241  Sum_probs=107.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++......        ..+.+.+|+.+++.++   ||||+++++++.+...+|+
T Consensus        30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~Iv~~~~~~~~~~~~~l  106 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE---HANIIKVLDIFENQGFFQL  106 (335)
T ss_dssp             EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC---CTTBCCEEEEEECSSEEEE
T ss_pred             eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC---CCCEeeEEEEEeeCCEEEE
Confidence            5678999999999999999999999999865421        1245778999998876   9999999999999999999


Q ss_pred             EEeccCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGG-DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+.+| +|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       107 v~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  166 (335)
T 3dls_A          107 VMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED  166 (335)
T ss_dssp             EEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCC
Confidence            99999766 99999999888999999999999999999999       999999999643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.80  E-value=1.1e-19  Score=146.47  Aligned_cols=120  Identities=18%  Similarity=0.266  Sum_probs=103.2

Q ss_pred             ccccCCCCcceeeccCCCCCC---eeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ---HVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~---~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+....++.   .||+|.+...... ..+.+.+|+.+++.++   ||||+++++++.+....|+||||
T Consensus        55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~  131 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD---HPNIIRLEGVVTRGRLAMIVTEY  131 (325)
T ss_dssp             EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECGGGCCEEEEEC
T ss_pred             eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCCccEEEeeC
Confidence            467889999999998775554   4999999764322 2356788888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++||+|.+++... +.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       132 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~  186 (325)
T 3kul_A          132 MENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS  186 (325)
T ss_dssp             CTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECC
Confidence            9999999999765 57999999999999999999999       99999999954

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.80  E-value=7.4e-20  Score=157.57  Aligned_cols=104  Identities=18%  Similarity=0.157  Sum_probs=88.6

Q ss_pred             cCCCCCCeeEEEEeeccccc----------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHH
Q psy4166         136 LSPAPSQHVAIKRITKKNLA----------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLAD  205 (249)
Q Consensus       136 ~~~~~~~~vavK~~~~~~~~----------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~  205 (249)
                      .+...|..+|+|.+.+....          ..+.+.+|+.+|+.+.  +|+||+++++++++.+.+||||||++||+|.+
T Consensus       254 rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~--~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d  331 (569)
T 4azs_A          254 RRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP--AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSD  331 (569)
T ss_dssp             EEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC--TTCCCCCEEEEEECSSEEEEEEECCCSEEHHH
T ss_pred             ccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC--CCCCeeEEEEEEEECCEEEEEEecCCCCcHHH
Confidence            33446899999999764211          1245889999999875  59999999999999999999999999999999


Q ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         206 YLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       206 ~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+.+.+++.+   ++.||+.||.|+|       |+||+||||..
T Consensus       332 ~i~~~~~l~~~~---I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~  374 (569)
T 4azs_A          332 MLAAGEEIDREK---ILGSLLRSLAALEKQGFWHDDVRPWNVMVDA  374 (569)
T ss_dssp             HHHTTCCCCHHH---HHHHHHHHHHHHHHTTCEESCCCGGGEEECT
T ss_pred             HHHhCCCCCHHH---HHHHHHHHHHHHHHCCceeccCchHhEEECC
Confidence            999998888754   6889999999999       99999999964

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.80  E-value=2.5e-19  Score=144.99  Aligned_cols=121  Identities=21%  Similarity=0.284  Sum_probs=107.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.++.||.+.+..+++.||+|.+.......   .+.+.+|+.+++.+.   |+||+++++++.+.+.+|+||||+
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~  123 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA---HQHVVGFHGFFEDNDFVFVVLELC  123 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEecCCeEEEEEecC
Confidence            46788999999999999999999999998654322   355778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++++|.+++..++.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus       124 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~  177 (335)
T 2owb_A          124 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED  177 (335)
T ss_dssp             TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCC
Confidence            99999999998888999999999999999999999       999999999643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.5e-19  Score=146.12  Aligned_cols=121  Identities=17%  Similarity=0.264  Sum_probs=105.9

Q ss_pred             ccccCCCCcceeeccCC---CCCCeeEEEEeecccc----cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP---APSQHVAIKRITKKNL----AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~~----~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.+|.||++...   .+++.||+|++.+...    ...+.+.+|+.+++.+.  +||||+++++++.+...+|+|
T Consensus        60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~lv  137 (355)
T 1vzo_A           60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR--QSPFLVTLHYAFQTETKLHLI  137 (355)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH--TCTTBCCEEEEEEETTEEEEE
T ss_pred             EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc--CCCceeEEEEEEeeCceEEEE
Confidence            46788999999988763   5889999999976432    12355678999998885  499999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++|+|.+++.+.+.+++..++.++.|++.||.|||       |+||+|||+..
T Consensus       138 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  194 (355)
T 1vzo_A          138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS  194 (355)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             eecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence            999999999999998888999999999999999999999       99999999954

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.80  E-value=3.9e-19  Score=141.19  Aligned_cols=121  Identities=21%  Similarity=0.284  Sum_probs=107.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+......+   .+.+.+|+.+++.+.   ||||+++++++.+.+..|+||||+
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~   97 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA---HQHVVGFHGFFEDNDFVFVVLELC   97 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC---CCCEeeeeeeeccCCEEEEEEecC
Confidence            46788999999999999999999999998654322   345778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++++|.+++...+.+++.++..++.|++.|+.|||       |+||+||++...
T Consensus        98 ~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~  151 (294)
T 2rku_A           98 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED  151 (294)
T ss_dssp             TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCC
Confidence            99999999998888999999999999999999999       999999999643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.80  E-value=2.7e-19  Score=143.23  Aligned_cols=121  Identities=21%  Similarity=0.229  Sum_probs=106.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+....|+||||++
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~   85 (311)
T 4agu_A            9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK---HPNLVNLLEVFRRKRRLHLVFEYCD   85 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCC---CCCccchhheeecCCeEEEEEEeCC
Confidence            56788999999999999999999999986543322  245678888888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|.+++...+.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        86 ~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~  138 (311)
T 4agu_A           86 HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKH  138 (311)
T ss_dssp             EEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             CchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCC
Confidence            9999999988888999999999999999999999       999999999643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.80  E-value=7.3e-20  Score=150.50  Aligned_cols=120  Identities=23%  Similarity=0.290  Sum_probs=105.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+....+++.||+|.+...... ..+.+.+|+.+++.++   ||||+++++++.+.+.+|+||||++|
T Consensus       120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~~~  196 (377)
T 3cbl_A          120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS---HPNIVRLIGVCTQKQPIYIVMELVQG  196 (377)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCC---CTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCC---CCCEEEEEEEEecCCCcEEEEEcCCC
Confidence            4678899999999999889999999998754222 2356788999988776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       197 g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~  248 (377)
T 3cbl_A          197 GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTE  248 (377)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcC
Confidence            99999998754 5999999999999999999999       99999999964

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.80  E-value=4.2e-19  Score=141.46  Aligned_cols=120  Identities=19%  Similarity=0.297  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.+|.+.+..+++.||+|.+........+.+.+|+.+++.+.   ||||+++++++.+.+.+|+||||+++|
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~  101 (302)
T 2j7t_A           25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD---HPYIVKLLGAYYHDGKLWIMIEFCPGG  101 (302)
T ss_dssp             EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCC---CTTBCCEEEEEECC-CEEEEEECCTTE
T ss_pred             ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCC---CCCEeeeeeeeeeCCeEEEEEEeCCCC
Confidence            56788999999999999999999999997665444567788888888776   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+ .+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       102 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~  152 (302)
T 2j7t_A          102 AVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL  152 (302)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT
T ss_pred             cHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECC
Confidence            99999876 456999999999999999999999       99999999964

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.80  E-value=2.5e-19  Score=146.93  Aligned_cols=121  Identities=15%  Similarity=0.258  Sum_probs=102.4

Q ss_pred             ccccCCCCcceeeccCC-------CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-------APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-------~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.+|.||++...       ..+..||+|++...... ..+.+.+|+.+++.+.  +||||+++++++.+.+.+|+
T Consensus        87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~hpnIv~~~~~~~~~~~~~l  164 (370)
T 2psq_A           87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYV  164 (370)
T ss_dssp             EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSC--CCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhc--CCCCEeeEEEEEccCCCEEE
Confidence            46899999999988642       34567999999765322 2356788999998872  39999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||++||+|.+++...+                .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  238 (370)
T 2psq_A          165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE  238 (370)
T ss_dssp             EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred             EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECC
Confidence            999999999999998753                3789999999999999999999       99999999954

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.80  E-value=5.2e-19  Score=139.15  Aligned_cols=120  Identities=21%  Similarity=0.374  Sum_probs=106.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+.......   .+.+.+|+.+++.+.   ||||+++++++.+....|+||||+
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~   93 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR---HPHIIKLYQVISTPTDFFMVMEYV   93 (276)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC---CCCEeEEEEEEecCCeEEEEEecc
Confidence            46788999999999998899999999997653222   245678888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  146 (276)
T 2h6d_A           94 SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA  146 (276)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECT
T ss_pred             CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECC
Confidence            99999999998888999999999999999999999       99999999964

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.80  E-value=3.6e-19  Score=140.33  Aligned_cols=120  Identities=19%  Similarity=0.264  Sum_probs=106.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..++..||+|++.......   ...+.+|+.+++.++   ||||+++++++.+....|+||||+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~   91 (279)
T 3fdn_A           15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR---HPNILRLYGYFHDATRVYLILEYA   91 (279)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC---CCCCcchhheEecCCEEEEEEecC
Confidence            56788999999999999999999999997653322   245677888877766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        92 ~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~  144 (279)
T 3fdn_A           92 PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS  144 (279)
T ss_dssp             TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcC
Confidence            99999999998888999999999999999999999       99999999954

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.80  E-value=3.6e-19  Score=143.01  Aligned_cols=120  Identities=23%  Similarity=0.323  Sum_probs=97.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....... .+.+.+|+.+++.++   ||||+++++++.+.+.+|+||||++ 
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~-   86 (317)
T 2pmi_A           11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK---HENIVRLYDVIHTENKLTLVFEFMD-   86 (317)
T ss_dssp             --------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCC---BTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred             eEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcC---CCCcceEEEEEEECCeEEEEEEecC-
Confidence            56788999999999999999999999997654322 255778888888776   9999999999999999999999997 


Q ss_pred             CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSK------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++...      +.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~  144 (317)
T 2pmi_A           87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKR  144 (317)
T ss_dssp             CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCC
Confidence            5999999764      34899999999999999999999       999999999643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.80  E-value=4.7e-19  Score=145.05  Aligned_cols=122  Identities=22%  Similarity=0.356  Sum_probs=107.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.+|.||.+....+++.||+|++.......        .+.+.+|+.+++.+.  +||||+++++++......|+
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~~~~~~~~~~~~~l  177 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA--GHPHIITLIDSYESSSFMFL  177 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT--TCTTBCCEEEEEEBSSEEEE
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc--CCCCEeEEEEEEeeCCEEEE
Confidence            46788999999999998899999999997643211        245678888888873  49999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||++||+|.+++...+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       178 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~  236 (365)
T 2y7j_A          178 VFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN  236 (365)
T ss_dssp             EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            9999999999999998888999999999999999999999       999999999643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.80  E-value=2.9e-19  Score=143.36  Aligned_cols=120  Identities=18%  Similarity=0.191  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE----eCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE----SDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~----~~~~~~lv~e~  197 (249)
                      ..+|.|.++.||.+.+..+++.||+|++........+.+.+|+.+++.+.   ||||+++++++.    .....|+||||
T Consensus        35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~lv~e~  111 (317)
T 2buj_A           35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN---HPNILRLVAYCLRERGAKHEAWLLLPF  111 (317)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCC---CTTBCCCCEEEEEEETTEEEEEEEEEC
T ss_pred             EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcC---CCCeeeEEEEEEeccCCCceeEEEEEe
Confidence            46788999999999998999999999987654444466788999888776   999999999987    34579999999


Q ss_pred             cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|+|.+++..    .+.+++.++..++.|++.|+.|||       |+||+||++..
T Consensus       112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~  169 (317)
T 2buj_A          112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD  169 (317)
T ss_dssp             CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC
Confidence            999999999986    356999999999999999999999       99999999954

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.80  E-value=4.2e-19  Score=143.43  Aligned_cols=121  Identities=24%  Similarity=0.272  Sum_probs=106.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+....|+||||++
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~  107 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR---HENLVNLLEVCKKKKRWYLVFEFVD  107 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCC---CCCEeeEEEEeecCCEEEEEEecCC
Confidence            57889999999999999999999999987553322  244678888888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|.+++...+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       108 ~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~  160 (331)
T 4aaa_A          108 HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS  160 (331)
T ss_dssp             EEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCC
Confidence            9999998887778999999999999999999999       999999999643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.80  E-value=2.1e-19  Score=146.79  Aligned_cols=121  Identities=17%  Similarity=0.165  Sum_probs=106.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.+..++..||+|++....... .+.+.+|+.+++.++   ||||+++++++.+...+|+||||++|
T Consensus        39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~  115 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN---SPYIVGFYGAFYSDGEISICMEHMDG  115 (360)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCC---CTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCC---CCCEEEEeEEEEECCEEEEEEECCCC
Confidence            56788999999999999999999999997653221 345677777777665   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      |+|.+++.+.+.+++..+..++.|++.|+.|||        |+||+|||+..+
T Consensus       116 ~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~  168 (360)
T 3eqc_A          116 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  168 (360)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCC
Confidence            999999999888999999999999999999999        899999999654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.80  E-value=1.3e-19  Score=144.28  Aligned_cols=119  Identities=28%  Similarity=0.411  Sum_probs=99.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--------------------------hhcHHHHHHHHHHhhhcCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--------------------------TQNFGKEINILKELTELHH  175 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~~~~~~~~~h  175 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......                          .+.+.+|+.+++.++   |
T Consensus        19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h   95 (298)
T 2zv2_A           19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD---H   95 (298)
T ss_dssp             EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC---C
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC---C
Confidence            56889999999999999999999999997653211                          144678888888776   9


Q ss_pred             CCeeeeeEeEEe--CCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         176 ENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       176 ~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+++++++.+  ...+|+||||+++|+|.+++.. +.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus        96 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  172 (298)
T 2zv2_A           96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE  172 (298)
T ss_dssp             TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence            999999999987  6789999999999999887643 46999999999999999999999       99999999964

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.80  E-value=1.3e-18  Score=139.13  Aligned_cols=123  Identities=22%  Similarity=0.313  Sum_probs=106.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----eE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-----TQNFGKEINILKELTELHHENVVELLHCKESDQ-----HV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----~~  191 (249)
                      ..+|.|.++.||++.+..+++.||+|++.......     .....+|+.+++.++.++||||+++++++....     .+
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~   94 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV   94 (308)
T ss_dssp             EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence            56889999999999999999999999997543211     245778999998888778999999999998755     58


Q ss_pred             EEEEeccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         192 YLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+||||+. |+|.+++.....  +++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        95 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~  156 (308)
T 3g33_A           95 TLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG  156 (308)
T ss_dssp             EEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTT
T ss_pred             EEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC
Confidence            99999996 699999988654  999999999999999999999       999999999543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.80  E-value=3.9e-19  Score=139.39  Aligned_cols=119  Identities=21%  Similarity=0.269  Sum_probs=103.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.||.+... .+..||+|++...... .+.+.+|+.+++.++   ||||+++++++.+....|+||||+++|
T Consensus        16 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   90 (269)
T 4hcu_A           16 QEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS---HPKLVQLYGVCLEQAPICLVFEFMEHG   90 (269)
T ss_dssp             EEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC-HHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             heecCCCccEEEEEEec-CCCeEEEEEecccccC-HHHHHHHHHHHHhCC---CCCEeeEEEEEecCCceEEEEEeCCCC
Confidence            46788999999999875 5677999999765433 356888999998887   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~  142 (269)
T 4hcu_A           91 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN  142 (269)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG
T ss_pred             cHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCC
Confidence            999999764 45899999999999999999999       999999999543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.80  E-value=2.1e-19  Score=147.49  Aligned_cols=120  Identities=18%  Similarity=0.209  Sum_probs=102.9

Q ss_pred             ccccCCCCcceeeccCC---CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSP---APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+...   ..+..||+|.+...... ..+.+.+|+.+++.++   ||||+++++++.+...+|+||||
T Consensus        51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~  127 (373)
T 2qol_A           51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD---HPNIIRLEGVVTKSKPVMIVTEY  127 (373)
T ss_dssp             EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEeeCCceEEEEeC
Confidence            56788999999998765   46778999999754322 2356788888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++||+|.+++.+.+ .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       128 ~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  182 (373)
T 2qol_A          128 MENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS  182 (373)
T ss_dssp             CTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcC
Confidence            99999999998764 6999999999999999999999       99999999954

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.80  E-value=5.7e-19  Score=139.10  Aligned_cols=121  Identities=29%  Similarity=0.422  Sum_probs=105.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+.......   .+.+.+|+.+++.++   ||||+++++++.+....|+||||+
T Consensus        17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~   93 (278)
T 3cok_A           17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK---HPSILELYNYFEDSNYVYLVLEMC   93 (278)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC---CCCeEeEEEEEccCCeEEEEEecC
Confidence            46788999999999988899999999997653222   245677888777665   999999999999999999999999


Q ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++++|.+++... +.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~  148 (278)
T 3cok_A           94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN  148 (278)
T ss_dssp             TTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT
T ss_pred             CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC
Confidence            999999999875 56999999999999999999999       999999999643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.80  E-value=5.7e-19  Score=140.69  Aligned_cols=121  Identities=21%  Similarity=0.264  Sum_probs=101.4

Q ss_pred             ccccCCCCcceeecc----CCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLL----SPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~----~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv  194 (249)
                      ..+|.|.+|.||.+.    +..+++.||+|++...... ..+.+.+|+.+++.++   ||||+++++++.+.  ..+|+|
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv  103 (302)
T 4e5w_A           27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY---HENIVKYKGICTEDGGNGIKLI  103 (302)
T ss_dssp             EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCC---CTTBCCEEEEEEC---CCEEEE
T ss_pred             hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCC---CCCeeeeeeEEecCCCceEEEE
Confidence            567889999999987    6778999999999754322 2356788888888876   99999999999876  679999


Q ss_pred             EeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+++|+|.+++.+. +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       104 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~  162 (302)
T 4e5w_A          104 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE  162 (302)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             EEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCC
Confidence            9999999999999654 56999999999999999999999       999999999643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.79  E-value=2.2e-19  Score=146.53  Aligned_cols=121  Identities=21%  Similarity=0.268  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-eEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQ-HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-~~~lv  194 (249)
                      ..+|.|.+|.||.+.     +..+++.||+|++....... .+.+.+|+.+++.+.  +||||+++++++.+.+ .+|+|
T Consensus        28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~hpniv~~~~~~~~~~~~~~iv  105 (359)
T 3vhe_A           28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVI  105 (359)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSTTSCCEEE
T ss_pred             eeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc--CCcceeeeeeeeecCCCceEEE
Confidence            467889999999997     66778999999997643222 356889999999884  4999999999988754 49999


Q ss_pred             EeccCCCCHHHHHHhcCC--------------------------------------------------------------
Q psy4166         195 MEFCNGGDLADYLVSKGT--------------------------------------------------------------  212 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~--------------------------------------------------------------  212 (249)
                      ||||+||+|.+++...+.                                                              
T Consensus       106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (359)
T 3vhe_A          106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL  185 (359)
T ss_dssp             EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred             EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence            999999999999987543                                                              


Q ss_pred             ----CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         213 ----LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       213 ----~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                          +++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~  228 (359)
T 3vhe_A          186 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  228 (359)
T ss_dssp             TTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             hccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC
Confidence                889999999999999999999       99999999964

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.79  E-value=2.7e-19  Score=141.46  Aligned_cols=121  Identities=22%  Similarity=0.348  Sum_probs=107.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.+|.+.+..++..||+|.+.......   .+.+.+|+.+++.++   ||||+++++++.+....|+||||+
T Consensus        20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~   96 (284)
T 2vgo_A           20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR---HPNILRMYNYFHDRKRIYLMLEFA   96 (284)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC---CCCEeeEEEEEEcCCEEEEEEEeC
Confidence            46788999999999998899999999997653222   245778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        97 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~  150 (284)
T 2vgo_A           97 PRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK  150 (284)
T ss_dssp             TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCC
Confidence            99999999998888999999999999999999999       999999999643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.79  E-value=2.4e-19  Score=152.40  Aligned_cols=119  Identities=20%  Similarity=0.264  Sum_probs=106.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+....++..||+|.+..... ..+.+.+|+.+++.++   ||||+++++++.+...+|+|||||++|
T Consensus       226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~E~~~~g  301 (495)
T 1opk_A          226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIK---HPNLVQLLGVCTREPPFYIITEFMTYG  301 (495)
T ss_dssp             EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcC---CCCEeeEEEEEecCCcEEEEEEccCCC
Confidence            467899999999999888899999999976432 3467889999998887   999999999999999999999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.  ..+++..+..++.|++.||.|||       |+||+|||+..
T Consensus       302 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~  353 (495)
T 1opk_A          302 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE  353 (495)
T ss_dssp             BHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECC
Confidence            999999874  35899999999999999999999       99999999964

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.79  E-value=1.7e-19  Score=148.69  Aligned_cols=87  Identities=26%  Similarity=0.288  Sum_probs=69.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC---------------------C-------CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP---------------------K-------VPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------------~-------~~~~~   54 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......++                     .       ....+
T Consensus       238 ~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (398)
T 4b99_A          238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGA  317 (398)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTC
T ss_pred             CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCC
Confidence            3579999999999999999999999999988766554433221111                     0       01246


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++++.+||.+||++||.+|+|++++++||||+...
T Consensus       318 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          318 DRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            89999999999999999999999999999998654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.79  E-value=3.7e-19  Score=140.54  Aligned_cols=119  Identities=18%  Similarity=0.243  Sum_probs=101.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.||.+... .+..||+|.+...... .+.+.+|+.+++.++   ||||+++++++.+...+|+||||+++|
T Consensus        30 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~  104 (283)
T 3gen_A           30 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLS---HEKLVQLYGVCTKQRPIFIITEYMANG  104 (283)
T ss_dssp             EECC---CEEEEEEEET-TTEEEEEEEECTTSBC-HHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSEEEEECCCTTC
T ss_pred             hhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC-HHHHHHHHHHHhcCC---CCCEeeEEEEEecCCCeEEEEeccCCC
Confidence            46788999999998654 6678999999765433 256788999988876   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.. .+.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~  156 (283)
T 3gen_A          105 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ  156 (283)
T ss_dssp             BHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT
T ss_pred             cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCC
Confidence            99999987 456999999999999999999999       999999999653

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.79  E-value=3.2e-19  Score=149.20  Aligned_cols=120  Identities=20%  Similarity=0.319  Sum_probs=104.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv  194 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++......  ..+.+.+|+.+++.++   |+||+++++++...     ..+|+|
T Consensus        32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~~~~~~lv  108 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK---SDYIIRLYDLIIPDDLLKFDELYIV  108 (432)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSCTTTCCCEEEE
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcC---CCCcceEEEEEecCCCCcCCeEEEE
Confidence            5678899999999999999999999999754222  2356788999888877   99999999999776     579999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++ |+|.+++...+.+++..++.++.|++.||.|||       |+||+|||+...
T Consensus       109 ~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~  165 (432)
T 3n9x_A          109 LEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD  165 (432)
T ss_dssp             EECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             EecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCC
Confidence            99996 699999998888999999999999999999999       999999999643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.79  E-value=3.6e-19  Score=143.24  Aligned_cols=119  Identities=26%  Similarity=0.458  Sum_probs=102.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--------chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--------KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+......        ....+.+|+.+++.+.   ||||+++++++.... .|+
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~-~~l   91 (322)
T 2ycf_A           16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAED-YYI   91 (322)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC---CTTBCCEEEEEESSS-EEE
T ss_pred             eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC---CCCCceEeeEEcCCc-eEE
Confidence            4678899999999999999999999999754321        1245778999988876   999999999987665 899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+++|+|.+++...+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        92 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~  149 (322)
T 2ycf_A           92 VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS  149 (322)
T ss_dssp             EEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred             EEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEec
Confidence            9999999999999998888999999999999999999999       99999999964

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.79  E-value=5.9e-19  Score=140.58  Aligned_cols=115  Identities=17%  Similarity=0.281  Sum_probs=101.4

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e~~  198 (249)
                      .+|.|.+|.||.+.+..+++.||+|++...     ....+|+.++..+.  +||||+++++++..    ...+|+||||+
T Consensus        25 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~--~h~~i~~~~~~~~~~~~~~~~~~lv~e~~   97 (299)
T 3m2w_A           25 VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRAS--QCPHIVRIVDVYENLYAGRKCLLIVMECL   97 (299)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHT--TSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhc--cCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence            478899999999999999999999999643     45677888874443  59999999999987    77899999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.+++...+  .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  152 (299)
T 3m2w_A           98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS  152 (299)
T ss_dssp             CSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEec
Confidence            9999999998864  6999999999999999999999       99999999976

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.79  E-value=3.2e-19  Score=140.33  Aligned_cols=120  Identities=26%  Similarity=0.400  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.+|.+.+..+++.||+|.+....... .+.+.+|+.+++.++   ||||+++++++.+....|+||||+++
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (276)
T 2yex_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN---HENVVKFYGHRREGNIQYLFLEYCSG   89 (276)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcC---CCCceeeeeEEEcCCEEEEEEEecCC
Confidence            46788999999999998899999999997654322 356778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++...+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~  140 (276)
T 2yex_A           90 GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE  140 (276)
T ss_dssp             EEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc
Confidence            999999988778999999999999999999999       99999999964

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.79  E-value=8.1e-19  Score=140.44  Aligned_cols=120  Identities=19%  Similarity=0.193  Sum_probs=106.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+......+   .+.+.+|+.+++.+.   ||||+++++++.+.+..|+||||+
T Consensus        40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~  116 (309)
T 2h34_A           40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ---EPHVVPIHDFGEIDGQLYVDMRLI  116 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC---CCCeeEEEEEEeeCCeEEEEEEec
Confidence            46788999999999998899999999997653332   245677888877765   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       117 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~  169 (309)
T 2h34_A          117 NGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA  169 (309)
T ss_dssp             CCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcC
Confidence            99999999998888999999999999999999999       99999999964

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.79  E-value=4.7e-19  Score=142.87  Aligned_cols=121  Identities=20%  Similarity=0.275  Sum_probs=105.0

Q ss_pred             ccccCCCCcceeecc----CCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE--eCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL----SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE--SDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~--~~~~~~lv~  195 (249)
                      ..+|.|.++.||++.    +..+++.||+|++........+.+.+|+.+++.+.   ||||+++++++.  +...+|+||
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv~  105 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH---SDFIVKYRGVSYGPGRQSLRLVM  105 (327)
T ss_dssp             EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSSCEEEEEE
T ss_pred             hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcC---CCceeEEEEEEecCCCceEEEEE
Confidence            467889999999987    67789999999998665444466889999988876   999999999887  466799999


Q ss_pred             eccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++||+|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~  163 (327)
T 3lxl_A          106 EYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE  163 (327)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             eecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCC
Confidence            999999999999874 45999999999999999999999       999999999643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.79  E-value=6.9e-19  Score=139.71  Aligned_cols=119  Identities=25%  Similarity=0.261  Sum_probs=104.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCC
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD  202 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~  202 (249)
                      .+|.|.+|.||.+.+..++..||+|.+........+.+.+|+.+++.+.   ||||+++++++.+.+..|+||||+++|+
T Consensus        29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~~  105 (295)
T 2clq_A           29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK---HKNIVQYLGSFSENGFIKIFMEQVPGGS  105 (295)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred             EEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCC---CCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence            6788999999999998999999999998654444466788888888776   9999999999999999999999999999


Q ss_pred             HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         203 LADYLVSKG---TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       203 L~~~l~~~~---~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |.+++....   .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  157 (295)
T 2clq_A          106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT  157 (295)
T ss_dssp             HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC
Confidence            999998752   4678999999999999999999       99999999964

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.79  E-value=4.1e-19  Score=140.57  Aligned_cols=120  Identities=21%  Similarity=0.274  Sum_probs=106.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.||.+.+..++..||+|.+..... ..+.+.+|+.+++.++   ||||+++++++.+....|+||||++||
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~~~   94 (288)
T 3kfa_A           19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIK---HPNLVQLLGVCTREPPFYIITEFMTYG   94 (288)
T ss_dssp             EESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred             eecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCC---CCCEeeEEEEEccCCCEEEEEEcCCCC
Confidence            467889999999999988899999999975432 2356788999998887   999999999999999999999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...+  .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        95 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~  147 (288)
T 3kfa_A           95 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN  147 (288)
T ss_dssp             EHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGG
T ss_pred             cHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCC
Confidence            9999998743  4899999999999999999999       999999999643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.79  E-value=5.7e-20  Score=158.66  Aligned_cols=92  Identities=28%  Similarity=0.526  Sum_probs=74.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +.+|+.++||||+||++|||++|++||.+.+...............+..|..+|+++++||.+||++||.+|++     +
T Consensus       365 ~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga  444 (689)
T 3v5w_A          365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA  444 (689)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCH
Confidence            46899999999999999999999999987543322233333333445667789999999999999999999997     7


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      +++++||||+.++|..+
T Consensus       445 ~ei~~HpfF~~idW~~l  461 (689)
T 3v5w_A          445 QEVKESPFFRSLDWQMV  461 (689)
T ss_dssp             HHHTTSGGGTTCCHHHH
T ss_pred             HHHhcCccccCCCHHHH
Confidence            99999999999987653

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.79  E-value=4.5e-19  Score=143.03  Aligned_cols=121  Identities=18%  Similarity=0.278  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  ...+.+|+.+++.+.  +||||+++++++.+...+|+||||++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~~iv~~~~~~~~~~~~~lv~e~~~  112 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK--SCPRVINLHEVYENTSEIILILEYAA  112 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT--TCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc--CCCCEEEEEEEEEeCCeEEEEEEecC
Confidence            35788999999999999999999999998654332  356788999988876  47999999999999999999999999


Q ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+|.+++...  +.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus       113 ~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~  166 (327)
T 3lm5_A          113 GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSS  166 (327)
T ss_dssp             TEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESC
T ss_pred             CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEec
Confidence            99999998654  56999999999999999999999       99999999975

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.79  E-value=3.4e-19  Score=144.47  Aligned_cols=121  Identities=20%  Similarity=0.258  Sum_probs=104.0

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.++.||.+...     .+++.||+|.+......+ .+.+.+|+.+++.++   ||||+++++++.+....|+||
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~  129 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD---NPNIVKLLGVCAVGKPMCLLF  129 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCC---CCCEEEEEEEEccCCceEEEE
Confidence            46788999999998875     345889999997643222 356788999888876   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK------------------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~------------------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++...                        +.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~  209 (343)
T 1luf_A          130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE  209 (343)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECC
Confidence            999999999999874                        46899999999999999999999       99999999964


Q ss_pred             c
Q psy4166         245 T  245 (249)
Q Consensus       245 ~  245 (249)
                      .
T Consensus       210 ~  210 (343)
T 1luf_A          210 N  210 (343)
T ss_dssp             G
T ss_pred             C
Confidence            3

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=9.5e-19  Score=138.52  Aligned_cols=120  Identities=23%  Similarity=0.327  Sum_probs=106.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+.+..+++.||+|++......  ..+.+.+|+.+++.++   ||||+++++++.+....|+||||++
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~  104 (287)
T 2wei_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD---HPNIMKLFEILEDSSSFYIVGELYT  104 (287)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcc---CCCccEEEEEEeCCCeEEEEEEccC
Confidence            4678899999999999889999999999765432  2356778888888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       105 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~  156 (287)
T 2wei_A          105 GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES  156 (287)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEec
Confidence            9999999988888999999999999999999999       99999999953

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.79  E-value=9.7e-19  Score=138.65  Aligned_cols=119  Identities=23%  Similarity=0.284  Sum_probs=103.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..++..||+|.+.......  .+.+.+|+.+++.++   ||||+++++++..    ...+|+||
T Consensus        32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~lv~  108 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCC---CCCeeeeeeeeccccCCCceEEEEE
Confidence            35788999999999999999999999998654332  355778888887776   9999999999875    46699999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeee
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~  243 (249)
                      ||+++|+|.+++.+.+.+++..+..++.|++.|+.|||         |+||+|||+.
T Consensus       109 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~  165 (290)
T 1t4h_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT  165 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES
T ss_pred             EecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE
Confidence            99999999999998888999999999999999999999         8899999996

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.78  E-value=5.2e-19  Score=138.61  Aligned_cols=119  Identities=18%  Similarity=0.225  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.+|.+... .+..||+|.+...... .+.+.+|+.+++.++   ||||+++++++.+....|+||||+++|
T Consensus        14 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (268)
T 3sxs_A           14 KELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLS---HPKLVKFYGVCSKEYPIYIVTEYISNG   88 (268)
T ss_dssp             EEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC-HHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             eeeccCCCceEEEEEec-CceeEEEEEeccCCCc-HHHHHHHHHHHHhCC---CCCEeeEEEEEccCCceEEEEEccCCC
Confidence            46788999999998654 5677999999765433 356788999998887   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...+ .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        89 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~  140 (268)
T 3sxs_A           89 CLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD  140 (268)
T ss_dssp             BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTT
T ss_pred             cHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCC
Confidence            9999998764 4999999999999999999999       999999999543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.78  E-value=7e-19  Score=144.90  Aligned_cols=121  Identities=18%  Similarity=0.290  Sum_probs=103.0

Q ss_pred             ccccCCCCcceeeccCC-------CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-------APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-------~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.+|.||++...       ..+..||+|++....... .+.+.+|+.+++.+.  +||||+++++++.+.+..|+
T Consensus        75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~hpnIv~~~~~~~~~~~~~l  152 (382)
T 3tt0_A           75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYV  152 (382)
T ss_dssp             EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEE
T ss_pred             eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhc--CCchhhhheeeeccCCceEE
Confidence            46788999999988743       344679999997653222 356788999998883  39999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+++|+|.+++...+                .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  226 (382)
T ss_dssp             EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence            999999999999998754                4899999999999999999999       99999999964

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.78  E-value=7.8e-19  Score=153.20  Aligned_cols=119  Identities=17%  Similarity=0.228  Sum_probs=103.3

Q ss_pred             cccCCCCcceeec--cCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLL--LSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~--~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.+|.||.+  .....++.||+|++.......  .+.+.+|+.+++.++   |||||++++++.. ...|+|||||
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~-~~~~lv~E~~  451 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYIVRMIGICEA-ESWMLVMEMA  451 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCC---CTTBCCEEEEEES-SSEEEEEECC
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEec-CCEEEEEEcc
Confidence            5789999999988  445677899999997653322  356889999999887   9999999999875 5689999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++...+.+++..+..++.|++.||.|||       |+||+||||...
T Consensus       452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~  505 (635)
T 4fl3_A          452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ  505 (635)
T ss_dssp             TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC
Confidence            99999999998888999999999999999999999       999999999754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.78  E-value=1.8e-18  Score=136.50  Aligned_cols=117  Identities=20%  Similarity=0.347  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--------------
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--------------  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--------------  187 (249)
                      ..++.|.++.+|.+.+..+++.||+|.+....    ..+.+|+.+++.++   ||||+++++++..              
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLD---HVNIVHYNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             EEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCC---CTTBCCEEEEEEEEEEC---------C
T ss_pred             eeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCC---CCCEEEEeeeEeccccCcccccccccc
Confidence            46788999999999998899999999997543    45678999988876   9999999999865              


Q ss_pred             --CCeEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         188 --DQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       188 --~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                        ...+|+||||+++|+|.+++...  ..+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC
Confidence              45689999999999999999764  56999999999999999999999       999999999754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=2.4e-19  Score=145.57  Aligned_cols=120  Identities=24%  Similarity=0.362  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc-----cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-----AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+.+..++..||+|++.+...     ...+.+.+|+.+++.++   ||||+++++++.+....|+|||
T Consensus        32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e  108 (345)
T 3hko_A           32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH---HPNIARLYEVYEDEQYICLVME  108 (345)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC---CCCcceeehhhccCCeEEEEEe
Confidence            467889999999999999999999999976532     22356788999988886   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc----------------------------------------CCCCHHHHHHHHHHHHHHHHHhh---
Q psy4166         197 FCNGGDLADYLVSK----------------------------------------GTLSEDTIRIFLKLHQMLQLYFH---  233 (249)
Q Consensus       197 ~~~~g~L~~~l~~~----------------------------------------~~~~~~~~~~~~~~i~~~l~ylh---  233 (249)
                      ||+||+|.+++...                                        ..+++..++.++.|++.|+.|||   
T Consensus       109 ~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  188 (345)
T 3hko_A          109 LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG  188 (345)
T ss_dssp             CCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999998521                                        12467889999999999999999   


Q ss_pred             ----cCCccceeeee
Q psy4166         234 ----DFTPWSFVILY  244 (249)
Q Consensus       234 ----d~kp~nili~~  244 (249)
                          |+||+|||+..
T Consensus       189 ivH~Dlkp~NIll~~  203 (345)
T 3hko_A          189 ICHRDIKPENFLFST  203 (345)
T ss_dssp             EECCCCCGGGEEESC
T ss_pred             ccccCCChhhEEEec
Confidence                99999999964

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.78  E-value=5.7e-19  Score=141.35  Aligned_cols=119  Identities=18%  Similarity=0.233  Sum_probs=103.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++..  .+..||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus        43 ~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~  117 (309)
T 3p86_A           43 EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR---HPNIVLFMGAVTQPPNLSIVTEYLS  117 (309)
T ss_dssp             EEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCC---CTTBCCEEEEECSTTCCEEEEECCT
T ss_pred             eEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCceEEEEecCC
Confidence            4678899999999865  58889999997654322  245778998888876   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGT---LSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~  245 (249)
                      ||+|.+++.+.+.   +++..+..++.|++.|+.|||         |+||+|||+...
T Consensus       118 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~  175 (309)
T 3p86_A          118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK  175 (309)
T ss_dssp             TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTT
T ss_pred             CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCC
Confidence            9999999987653   999999999999999999999         889999999654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.78  E-value=1.2e-18  Score=139.69  Aligned_cols=118  Identities=23%  Similarity=0.338  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.++.+|.+.+..+++.||+|.+....  ..+.+.+|+.+++.+.   ||||+++++++.+...+|+||||+++|
T Consensus        35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~  109 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCD---SPHVVKYYGSYFKNTDLWIVMEYCGAG  109 (314)
T ss_dssp             EECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCC---CCCCccEEEEEEeCCEEEEEeecCCCC
Confidence            56788999999999998899999999997643  2356778888888776   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.. .+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       110 ~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~  160 (314)
T 3com_A          110 SVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT  160 (314)
T ss_dssp             EHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECC
Confidence            99999974 457999999999999999999999       99999999964

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.78  E-value=3e-18  Score=137.07  Aligned_cols=121  Identities=22%  Similarity=0.278  Sum_probs=103.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..++.|.+|.||.+....+++.||+|++......+   ...+.+|+.+++.++   ||||+++++++......|+||||+
T Consensus        38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~  114 (310)
T 2wqm_A           38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN---HPNVIKYYASFIEDNELNIVLELA  114 (310)
T ss_dssp             EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCcEEEEEecC
Confidence            56788999999999988899999999997543222   245678888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++..    .+.+++..+..++.|++.|+.|||       |+||+||++..+
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~  172 (310)
T 2wqm_A          115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT  172 (310)
T ss_dssp             CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCC
Confidence            99999999975    346899999999999999999999       999999999643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.78  E-value=9.7e-20  Score=149.78  Aligned_cols=123  Identities=10%  Similarity=0.045  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeee-------EeEEeCC--
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELL-------HCKESDQ--  189 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~-------~~~~~~~--  189 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++......   ..+.+.+|+.+++.++.++|||||+++       +++.+.+  
T Consensus        79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  158 (377)
T 3byv_A           79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK  158 (377)
T ss_dssp             EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred             ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence            5688899999999999889999999999854322   235678999888888777899999998       6666553  


Q ss_pred             ---------------eEEEEEeccCCCCHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHhh-------cCCccce
Q psy4166         190 ---------------HVYLVMEFCNGGDLADYLVSKGTLSE-------DTIRIFLKLHQMLQLYFH-------DFTPWSF  240 (249)
Q Consensus       190 ---------------~~~lv~e~~~~g~L~~~l~~~~~~~~-------~~~~~~~~~i~~~l~ylh-------d~kp~ni  240 (249)
                                     ..|+||||+ +|+|.+++.+.+.+++       ..+..++.|++.||.|||       |+||+||
T Consensus       159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NI  237 (377)
T 3byv_A          159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI  237 (377)
T ss_dssp             SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence                           389999999 6899999998665666       777889999999999999       9999999


Q ss_pred             eeeec
Q psy4166         241 VILYT  245 (249)
Q Consensus       241 li~~~  245 (249)
                      |+...
T Consensus       238 ll~~~  242 (377)
T 3byv_A          238 VLDQR  242 (377)
T ss_dssp             EECTT
T ss_pred             EEcCC
Confidence            99643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.78  E-value=1.1e-18  Score=142.42  Aligned_cols=121  Identities=16%  Similarity=0.172  Sum_probs=104.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhh--cCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTE--LHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~--~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.... ...+...+|+.+++.+..  ++||||+++++++......|+||||+ 
T Consensus        41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-  118 (360)
T 3llt_A           41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-  118 (360)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred             EEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence            46789999999999999999999999997432 222456778888887752  24999999999999999999999999 


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++.+.+  .+++..++.++.|++.||.|||       |+||+|||+..
T Consensus       119 ~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  172 (360)
T 3llt_A          119 GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD  172 (360)
T ss_dssp             CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcc
Confidence            999999998764  4999999999999999999999       99999999964

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.78  E-value=2e-18  Score=138.26  Aligned_cols=121  Identities=18%  Similarity=0.165  Sum_probs=99.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++....+++.||+|++.......  ......|+..+..+  .+|+||+++++++.+...+|+||||+ 
T Consensus        63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~--~~h~~iv~l~~~~~~~~~~~lv~e~~-  139 (311)
T 3p1a_A           63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV--GQHPCCVRLEQAWEEGGILYLQTELC-  139 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH--CCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred             heeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh--cCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence            46889999999999999999999999986543222  12334444444443  25999999999999999999999999 


Q ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       140 ~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  193 (311)
T 3p1a_A          140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR  193 (311)
T ss_dssp             CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGG
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC
Confidence            679999988754 5999999999999999999999       999999999543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.78  E-value=5.7e-20  Score=148.84  Aligned_cols=121  Identities=21%  Similarity=0.166  Sum_probs=97.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--------chhcHHHHHHHHHHhhhc------CCCCeeeeeEeE--
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--------KTQNFGKEINILKELTEL------HHENVVELLHCK--  185 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~~~~~~~~------~h~niv~l~~~~--  185 (249)
                      ..+|.|.+|.||++.+  +++.||+|++......        ..+.+.+|+.+++.++.+      +||||+++.+.+  
T Consensus        26 ~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~  103 (336)
T 2vuw_A           26 EKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV  103 (336)
T ss_dssp             EEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred             eeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence            4678899999999986  6799999999865321        125678999999888633      366666666553  


Q ss_pred             ---------------Ee-------------CCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh----
Q psy4166         186 ---------------ES-------------DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH----  233 (249)
Q Consensus       186 ---------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh----  233 (249)
                                     .+             ...+|+|||||++|++.+.+.+ +.+++..++.++.|++.||.|||    
T Consensus       104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~  182 (336)
T 2vuw_A          104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLR  182 (336)
T ss_dssp             ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence                           32             6889999999999987777754 45899999999999999999999    


Q ss_pred             ----cCCccceeeeec
Q psy4166         234 ----DFTPWSFVILYT  245 (249)
Q Consensus       234 ----d~kp~nili~~~  245 (249)
                          |+||+||||...
T Consensus       183 ivHrDlKp~NILl~~~  198 (336)
T 2vuw_A          183 FEHRDLHWGNVLLKKT  198 (336)
T ss_dssp             CBCSCCCGGGEEEEEC
T ss_pred             EeECCCCHHHEEEecc
Confidence                999999999865

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.78  E-value=1.7e-18  Score=138.15  Aligned_cols=119  Identities=19%  Similarity=0.249  Sum_probs=105.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+....... .+.+.+|+.+++.+.   ||||+++++++.+...+|+||||++|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~  104 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKDTKLWIIMEYLGG  104 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCCeEEEEEEeCCC
Confidence            56788999999999988899999999997654322 356788888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ++|.+++... .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       105 ~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  154 (303)
T 3a7i_A          105 GSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE  154 (303)
T ss_dssp             EEHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECC
Confidence            9999999754 5999999999999999999999       99999999964

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.78  E-value=4.3e-19  Score=144.62  Aligned_cols=87  Identities=24%  Similarity=0.280  Sum_probs=63.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhc--------------------------------------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKN--------------------------------------   43 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~--------------------------------------   43 (249)
                      ..|+.++||||+||++|||++|++||.+.++. +....+...                                      
T Consensus       222 ~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  301 (361)
T 4f9c_A          222 PNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGM  301 (361)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--
T ss_pred             CCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccc
Confidence            35899999999999999999999999655432 221111100                                      


Q ss_pred             cc-------------CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          44 LV-------------LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        44 ~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ..             .....+..+++++.+||.+||++||.+|+|++|+++||||++++
T Consensus       302 ~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          302 DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             --------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             cccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            00             00011235789999999999999999999999999999998753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.78  E-value=4.8e-19  Score=141.84  Aligned_cols=121  Identities=17%  Similarity=0.243  Sum_probs=102.4

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.++.||.+.+     ..++..||+|.+...... ..+.+.+|+.+++.++   ||||+++++++.+...+|+||
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~  105 (314)
T 2ivs_A           29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN---HPHVIKLYGACSQDGPLLLIV  105 (314)
T ss_dssp             EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC---CCceeeEEEEEecCCceEEEE
Confidence            4578899999998865     345688999999754322 2355778888887775   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKGT------------------------LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~------------------------~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++||+|.+++...+.                        +++.++..++.|++.|+.|||       |+||+||++..
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~  185 (314)
T 2ivs_A          106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE  185 (314)
T ss_dssp             ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcC
Confidence            99999999999987543                        889999999999999999999       99999999974


Q ss_pred             c
Q psy4166         245 T  245 (249)
Q Consensus       245 ~  245 (249)
                      .
T Consensus       186 ~  186 (314)
T 2ivs_A          186 G  186 (314)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.78  E-value=8.3e-19  Score=140.38  Aligned_cols=122  Identities=17%  Similarity=0.238  Sum_probs=104.8

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.     ...+++.||+|.+...... ..+.+.+|+.+++.+.  +||||+++++++.+.+..|+||
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~i~~~~~~~~~~~~~~lv~  106 (313)
T 1t46_A           29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVIT  106 (313)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEEEE
T ss_pred             HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc--cCCCeeeEEEEEecCCCcEEEE
Confidence            467889999999886     4567889999999765332 2356789999998883  3999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKG------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++...+                  .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  181 (313)
T 1t46_A          107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG  181 (313)
T ss_dssp             ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC
Confidence            9999999999998764                  3899999999999999999999       999999999643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.78  E-value=6e-19  Score=141.92  Aligned_cols=119  Identities=17%  Similarity=0.163  Sum_probs=102.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.. .+++.||+|++........+.+.+|+.+++.++   ||||+++++++.+....|+||||++||
T Consensus        45 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~  120 (321)
T 2qkw_B           45 FLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCR---HPHLVSLIGFCDERNEMILIYKYMENG  120 (321)
T ss_dssp             CCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCC---CTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred             ceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCC---CCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence            4678899999999885 468899999987654444456778888877665   999999999999999999999999999


Q ss_pred             CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG----TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+    .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~  174 (321)
T 2qkw_B          121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDE  174 (321)
T ss_dssp             BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECT
T ss_pred             cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECC
Confidence            9999997653    4899999999999999999999       99999999964

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.78  E-value=4.6e-19  Score=152.69  Aligned_cols=92  Identities=21%  Similarity=0.273  Sum_probs=77.4

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      .+.+|+.++||||+||++|||++|++||.+.+..++...+...... ....+..+++++++||.+||++||.+|+++.++
T Consensus       329 ~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~  408 (573)
T 3uto_A          329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA  408 (573)
T ss_dssp             TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            3678999999999999999999999999999888776666544322 223345789999999999999999999999999


Q ss_pred             hcCCCCCCCCCCC
Q psy4166          80 FAHPFLQPLAPHP   92 (249)
Q Consensus        80 ~~~~~~~~~~~~~   92 (249)
                      ++||||....+..
T Consensus       409 l~Hpw~~~~~~~~  421 (573)
T 3uto_A          409 LEHPWLTPGNAPG  421 (573)
T ss_dssp             HHSTTTSCCCCTT
T ss_pred             hcCcCcCCCCCCC
Confidence            9999999765543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=9.7e-19  Score=141.93  Aligned_cols=122  Identities=23%  Similarity=0.339  Sum_probs=101.8

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+..     ..++..||+|.+..... ...+.+.+|+.+++.+.  +||||+++++++...+..|+||
T Consensus        51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~~~~~~~~~~~~~lv~  128 (344)
T 1rjb_A           51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIYLIF  128 (344)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhc--CCCCeeeEEEEEeeCCccEEEE
Confidence            4678899999998875     34667899999975432 22356889999999882  3999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKG-----------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++...+                       .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  208 (344)
T 1rjb_A          129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG  208 (344)
T ss_dssp             ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT
T ss_pred             ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC
Confidence            9999999999998753                       2789999999999999999999       999999999643

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.78  E-value=1.2e-18  Score=140.46  Aligned_cols=121  Identities=20%  Similarity=0.282  Sum_probs=103.7

Q ss_pred             ccccCCCCcceeecc----CCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--eEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL----SPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ--HVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--~~~lv~  195 (249)
                      ..+|.|.+|.||.+.    +..+++.||+|++........+.+.+|+.+++.++   ||||+++++++...+  .+|+||
T Consensus        47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv~  123 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSAGRRNLKLIM  123 (326)
T ss_dssp             EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCC---CTTBCCEEEEECC----CCEEEE
T ss_pred             eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEEecCCCceEEEE
Confidence            567889999999887    56789999999997654444466888999988876   999999999987644  789999


Q ss_pred             eccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++.+. +.+++.++..++.|++.|+.|||       |+||+||++...
T Consensus       124 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~  181 (326)
T 2w1i_A          124 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE  181 (326)
T ss_dssp             CCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET
T ss_pred             ECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCC
Confidence            999999999999876 35999999999999999999999       999999999753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.78  E-value=4e-19  Score=142.31  Aligned_cols=122  Identities=23%  Similarity=0.227  Sum_probs=101.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc------chhcHHHHHHHHHHhhh-cCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA------KTQNFGKEINILKELTE-LHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~~~~~~~-~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.++.||.+.+..+++.||+|++......      ....+.+|+.+++.+.. .+|+||+++++++.+.+..++|
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v  116 (312)
T 2iwi_A           37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV  116 (312)
T ss_dssp             EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEE
T ss_pred             eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEE
Confidence            5678899999999999899999999999765332      22456789998888721 1399999999999999999999


Q ss_pred             Eec-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         195 MEF-CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       195 ~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||| +.+++|.+++.+++.+++..+..++.|++.|+.|||       |+||+||++.
T Consensus       117 ~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  173 (312)
T 2iwi_A          117 LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID  173 (312)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe
Confidence            999 889999999998888999999999999999999999       9999999996

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.77  E-value=1.4e-18  Score=137.84  Aligned_cols=119  Identities=16%  Similarity=0.214  Sum_probs=101.0

Q ss_pred             cccCCCCcceeec--cCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLL--LSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~--~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.++.||.+  .....++.||+|.+.......  .+.+.+|+.+++.++   ||||+++++++ .....|+||||+
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~-~~~~~~lv~e~~   99 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYIVRMIGIC-EAESWMLVMEMA   99 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC---CTTBCCEEEEE-ESSSEEEEEECC
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCC---CCCEEEEEEEE-CCCCcEEEEEeC
Confidence            6788999999998  456678899999997653222  356778888888776   99999999998 567789999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++...+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       100 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~  153 (291)
T 1xbb_A          100 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ  153 (291)
T ss_dssp             TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             CCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCC
Confidence            99999999999888999999999999999999999       999999999653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.77  E-value=3.1e-18  Score=139.07  Aligned_cols=117  Identities=23%  Similarity=0.372  Sum_probs=103.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCC--CCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHH--ENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h--~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+.+ .+++.||+|++.......  .+.+.+|+.+++.+.   |  +||+++++++.+...+|+||| 
T Consensus        15 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---~~~~~iv~~~~~~~~~~~~~lv~e-   89 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ---QHSDKIIRLYDYEITDQYIYMVME-   89 (343)
T ss_dssp             EEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT---TTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred             EEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhh---hcCCceEEEeeeEeeCCEEEEEEe-
Confidence            5688999999999977 468899999997654322  256788999999887   5  999999999999999999999 


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +.+|+|.+++.+.+.+++.++..++.|++.|+.|||       |+||+|||+.
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~  142 (343)
T 3dbq_A           90 CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV  142 (343)
T ss_dssp             CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE
Confidence            458899999999888999999999999999999999       9999999995

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.77  E-value=3e-18  Score=141.49  Aligned_cols=119  Identities=24%  Similarity=0.382  Sum_probs=103.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+.. ++.||+|++.......  .+.+.+|+.+++.+.. +||||+++++++.....+|+||| +.
T Consensus        62 ~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~-~~~~iv~~~~~~~~~~~~~lv~E-~~  138 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIRLYDYEITDQYIYMVME-CG  138 (390)
T ss_dssp             EEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred             EEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc-CCCeEEEEEEEEecCCEEEEEEe-cC
Confidence            568899999999998765 8999999997654322  3567899999998861 25999999999999999999999 56


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +|+|.+++.+.+.+++.++..++.|++.||.|||       |+||+|||+.
T Consensus       139 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~  189 (390)
T 2zmd_A          139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV  189 (390)
T ss_dssp             SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE
Confidence            8899999999888999999999999999999999       9999999994

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.77  E-value=1.9e-18  Score=138.78  Aligned_cols=120  Identities=23%  Similarity=0.334  Sum_probs=101.1

Q ss_pred             ccccCCCCcceee----ccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEE
Q psy4166         122 DVVSTSPPRPSSL----LLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~----~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv  194 (249)
                      ..+|.|.+|.||+    +.+..+++.||+|++...... ..+.+.+|+.+++.++   ||||+++++++.+  ...+|+|
T Consensus        37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY---HEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTTTEEEEE
T ss_pred             heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCC---CcchhhEEEEEecCCCceEEEE
Confidence            5678899999954    445668999999999865322 2356788999998887   9999999999987  4689999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+++|+|.+++.+.+ +++..+..++.|++.|+.|||       |+||+||++...
T Consensus       114 ~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~  170 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND  170 (318)
T ss_dssp             ECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCC
Confidence            99999999999998765 999999999999999999999       999999999643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.77  E-value=1.1e-18  Score=138.33  Aligned_cols=118  Identities=25%  Similarity=0.294  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+ .+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus         8 ~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~   83 (288)
T 1ob3_A            8 EKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK---HSNIVKLYDVIHTKKRLVLVFEHLD   83 (288)
T ss_dssp             EEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC---CTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             hhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcC---CCCEeeeeeEEccCCeEEEEEEecC
Confidence            4678899999999987 678999999997543322  245677888877765   9999999999999999999999997


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + +|.+++... +.+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  135 (288)
T 1ob3_A           84 Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR  135 (288)
T ss_dssp             E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence            5 999999874 56999999999999999999999       99999999964

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.77  E-value=1.5e-18  Score=139.96  Aligned_cols=120  Identities=16%  Similarity=0.189  Sum_probs=98.9

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.     +..++..||+|.+...... ....+.+|+.+++.+.   ||||+++++++.+....|+||
T Consensus        36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~  112 (327)
T 2yfx_A           36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN---HQNIVRCIGVSLQSLPRFILM  112 (327)
T ss_dssp             EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCC---CCCCCeEEEEEcCCCCcEEEE
Confidence            467889999999987     4567889999999644222 2345778888888776   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG-------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++||+|.+++...+       .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       113 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~  175 (327)
T 2yfx_A          113 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC  175 (327)
T ss_dssp             ECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred             ecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEec
Confidence            9999999999998763       3889999999999999999999       99999999973

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.77  E-value=2.1e-18  Score=139.47  Aligned_cols=121  Identities=15%  Similarity=0.268  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCC-------CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-------APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-------~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.+|.||.+...       .++..||+|++...... ..+.+.+|+.+++.+.  +||||+++++++.+.+.+|+
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~~~~~~~~~~~~~l  118 (334)
T 2pvf_A           41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KHKNIINLLGACTQDGPLYV  118 (334)
T ss_dssp             EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSCCEE
T ss_pred             eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhh--cCCCEeeEEEEEccCCceEE
Confidence            46788999999988753       45778999999764322 2356788999998883  39999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||+++|+|.+++...+                .+++.++..++.|++.|+.|||       |+||+||++..
T Consensus       119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE  192 (334)
T ss_dssp             EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence            999999999999998754                3889999999999999999999       99999999954

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.77  E-value=1.2e-18  Score=139.61  Aligned_cols=119  Identities=27%  Similarity=0.317  Sum_probs=99.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+. +++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus        27 ~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~  102 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH---HPNIVSLIDVIHSERCLTLVFEFME  102 (311)
T ss_dssp             EEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCC---CTTBCCEEEEECCSSCEEEEEECCS
T ss_pred             hhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcC---CCCEeeeeeEEccCCEEEEEEcCCC
Confidence            56889999999999874 58999999997543322  245778888888876   9999999999999999999999997


Q ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      + +|.+++...+ .+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus       103 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~  155 (311)
T 3niz_A          103 K-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD  155 (311)
T ss_dssp             E-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             C-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCC
Confidence            4 8888887753 5999999999999999999999       999999999643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.77  E-value=4.7e-18  Score=135.06  Aligned_cols=119  Identities=20%  Similarity=0.167  Sum_probs=105.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+.+..+++.||+|++....  ..+.+.+|+.+++.+.  +|+|++++++++.+....|+||||+ +|
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~--~~~~i~~~~~~~~~~~~~~lv~e~~-~~   90 (298)
T 1csn_A           16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA--GCTGIPNVYYFGQEGLHNVLVIDLL-GP   90 (298)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTT--TCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHh--cCCCCCeEEeecCCCceeEEEEEec-CC
Confidence            46788999999999988999999999986543  2356888999998884  4999999999999999999999999 99


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  142 (298)
T 1csn_A           91 SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRP  142 (298)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCS
T ss_pred             CHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccC
Confidence            9999998754 5999999999999999999999       999999999643

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.77  E-value=1.8e-18  Score=145.38  Aligned_cols=116  Identities=25%  Similarity=0.342  Sum_probs=100.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-eEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ-HVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+...  ++.||+|++....  ..+.+.+|+.+++.++   ||||+++++++.... .+|+|||||++
T Consensus       199 ~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~iv~e~~~~  271 (450)
T 1k9a_A          199 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLR---HSNLVQLLGVIVEEKGGLYIVTEYMAK  271 (450)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCC---CTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred             eeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhcc---CCCEEEEEEEEEcCCCceEEEEEecCC
Confidence            45788999999988753  7799999997543  3367889999998876   999999999987655 79999999999


Q ss_pred             CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+.+.  +++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       272 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~  324 (450)
T 1k9a_A          272 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE  324 (450)
T ss_dssp             CBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC
Confidence            999999998653  799999999999999999999       99999999964

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.77  E-value=2.7e-18  Score=141.63  Aligned_cols=119  Identities=24%  Similarity=0.308  Sum_probs=94.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC--eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQ--HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~--~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....  ..+...+|+.+++.+.  +||||+++++++...+  .+|+||||
T Consensus        15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~--~h~niv~l~~~~~~~~~~~~~lv~e~   92 (388)
T 3oz6_A           15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS--GHENIVNLLNVLRADNDRDVYLVFDY   92 (388)
T ss_dssp             EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT--TCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred             EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc--CCCCCCeeeeEEecCCCCEEEEEecc
Confidence            4678899999999999999999999999654222  2345677888887765  5999999999997544  79999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+ |+|.+++..+ .+++..++.++.|++.|+.|||       |+||+|||+..
T Consensus        93 ~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~  144 (388)
T 3oz6_A           93 ME-TDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA  144 (388)
T ss_dssp             CS-EEHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             cC-cCHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcC
Confidence            97 6999999875 5999999999999999999999       99999999954

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.77  E-value=7.7e-19  Score=139.90  Aligned_cols=120  Identities=23%  Similarity=0.334  Sum_probs=89.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.+|.+.+..+++.||+|.+...... ..+.+.+|+.+++.+.   ||||+++++++...+..|+||||++|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~   97 (303)
T 2vwi_A           21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH---HPNIVSYYTSFVVKDELWLVMKLLSG   97 (303)
T ss_dssp             EECC---CCCEEEEEC----CEEEEECCC----------------CCCCCC---CTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred             heeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcC---CCCEeeEEEEEeecCCcEEEehhccC
Confidence            5678899999999998889999999998754322 2245667777666555   99999999999999999999999999


Q ss_pred             CCHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVS--------KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~--------~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++..        .+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~  156 (303)
T 2vwi_A           98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE  156 (303)
T ss_dssp             CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT
T ss_pred             CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC
Confidence            999999974        345999999999999999999999       99999999964

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.77  E-value=1.4e-18  Score=140.03  Aligned_cols=122  Identities=24%  Similarity=0.325  Sum_probs=103.0

Q ss_pred             ccccCCCCcceeeccCCCCCCee--EEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHV--AIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~v--avK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+....++..+  |+|.+..... ...+.+.+|+.+++.+.  +||||+++++++.+.+.+|+||||+
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~~~~~~~~~~~~~lv~e~~  108 (327)
T 1fvr_A           31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLYLAIEYA  108 (327)
T ss_dssp             EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC--CCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             eeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhcc--CCCchhhhceeeeeCCceEEEEecC
Confidence            46788999999999888788755  9998875322 22356788888888772  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++|+|.+++...+                .+++.++..++.|++.|+.|||       |+||+||++...
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~  178 (327)
T 1fvr_A          109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN  178 (327)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG
T ss_pred             CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC
Confidence            9999999998754                6999999999999999999999       999999999643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.77  E-value=3.1e-18  Score=139.28  Aligned_cols=119  Identities=24%  Similarity=0.300  Sum_probs=103.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......   .+.+.+|+.+++.++   ||||+++++++.+....|+||||+
T Consensus        60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~  136 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR---HPNTIQYRGCYLREHTAWLVMEYC  136 (348)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCeEEEEEecC
Confidence            46789999999999988999999999997643222   245778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + |+|.+++.. .+.+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       137 ~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  189 (348)
T 1u5q_A          137 L-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE  189 (348)
T ss_dssp             S-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred             C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence            7 688888864 457999999999999999999999       99999999964

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.77  E-value=6.5e-19  Score=138.07  Aligned_cols=119  Identities=15%  Similarity=0.167  Sum_probs=100.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC--CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD--QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~--~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+...  +..||+|.+.......  .+.+.+|+.+++.++   ||||+++++++.+.  ..+|+||||
T Consensus        16 ~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~lv~e~   90 (271)
T 3kmu_A           16 TKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS---HPNVLPVLGACQSPPAPHPTLITHW   90 (271)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCS---CTTEECEEEEECTTTSSSCEEEEEC
T ss_pred             HHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcC---CCchhheEEEEccCCCCCeEeeecc
Confidence            56788999999999864  8889999997653222  245677777776665   99999999999887  789999999


Q ss_pred             cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~  245 (249)
                      ++||+|.+++.+.+  .+++..+..++.|++.|+.|||         |+||+||++...
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~  149 (271)
T 3kmu_A           91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDED  149 (271)
T ss_dssp             CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTT
T ss_pred             cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCC
Confidence            99999999998765  4899999999999999999999         789999999643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.76  E-value=2e-18  Score=135.12  Aligned_cols=119  Identities=21%  Similarity=0.263  Sum_probs=103.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..++.|.++.+|.+... .+..||+|.+...... .+.+.+|+.+++.++   ||||+++++++.+....|+||||+++|
T Consensus        14 ~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (267)
T 3t9t_A           14 QEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS---HPKLVQLYGVCLEQAPICLVTEFMEHG   88 (267)
T ss_dssp             EEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC-HHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred             eEecCCCceeEEEEEec-CCCeEEEEEccccCCC-HHHHHHHHHHHHhCC---CCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence            45788899999998765 5678999999865433 356788999888876   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++... +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        89 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~  140 (267)
T 3t9t_A           89 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN  140 (267)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGG
T ss_pred             cHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCC
Confidence            999999875 46899999999999999999999       999999999643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.4e-18  Score=142.24  Aligned_cols=119  Identities=26%  Similarity=0.386  Sum_probs=96.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++...      ..+|+
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~~~~~~~l  107 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR---HENVIGLLDVFTPDETLDDFTDFYL  107 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC---BTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC---CcCCCCceeeEecCCccccCceEEE
Confidence            56889999999999999999999999996543221  255778888888876   99999999999765      34699


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+ +++|.+++... .+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus       108 v~e~~-~~~L~~~~~~~-~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  164 (367)
T 1cm8_A          108 VMPFM-GTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED  164 (367)
T ss_dssp             EEECC-SEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             EEecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCC
Confidence            99999 88999999874 5999999999999999999999       999999999643

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.76  E-value=2.4e-18  Score=138.96  Aligned_cols=122  Identities=20%  Similarity=0.272  Sum_probs=103.5

Q ss_pred             ccccCCCCcceeeccCCCCC-----CeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS-----QHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~-----~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+....++     ..||+|.+...... ..+.+.+|+.+++.+.  +||||+++++++.+.+.+|+||
T Consensus        52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~h~~iv~~~~~~~~~~~~~lv~  129 (333)
T 2i1m_A           52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--QHENIVNLLGACTHGGPVLVIT  129 (333)
T ss_dssp             EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc--CCCCeeeEEEEEecCCceEEEE
Confidence            46788999999999876554     47999999764322 2356789999999882  3999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK--------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+++|+|.+++.+.              ..+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred             ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence            999999999999863              24799999999999999999999       999999999653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.76  E-value=6.3e-18  Score=136.11  Aligned_cols=120  Identities=23%  Similarity=0.306  Sum_probs=104.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES------DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~~lv~  195 (249)
                      ..++.|.++.||.+.+..+++.||+|++..... ....+.+|+.+++.+.  +||||+++++++..      ...+|+||
T Consensus        30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~--~h~~i~~~~~~~~~~~~~~~~~~~~lv~  106 (326)
T 2x7f_A           30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYS--HHRNIATYYGAFIKKNPPGMDDQLWLVM  106 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHC--CSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred             EEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhcc--CCCCeeeeeeEEeeccCccccceEEEEE
Confidence            567889999999999988999999999975432 2366788999988873  49999999999987      56899999


Q ss_pred             eccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++...  ..+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~  164 (326)
T 2x7f_A          107 EFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE  164 (326)
T ss_dssp             ECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT
T ss_pred             EcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcC
Confidence            999999999999874  46999999999999999999999       99999999964

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.76  E-value=1.9e-18  Score=139.08  Aligned_cols=117  Identities=16%  Similarity=0.214  Sum_probs=95.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv~e~  197 (249)
                      ..+|.|.+|.||++...  ++.||+|++...... .....+|+.+++.++   ||||+++++++.+..    .+|+||||
T Consensus        30 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~~~~~lv~e~  103 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMK---HENILQFIGAEKRGTSVDVDLWLITAF  103 (322)
T ss_dssp             EEEECSTTCEEEEEEET--TEEEEEEEECGGGHH-HHHHHHHHHTSTTCC---CTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             heecccCceEEEEEEEC--CCEEEEEEeecCchH-HHHHHHHHHHHhcCC---CCCchhhcceeccCCCCCceEEEEEec
Confidence            46789999999999754  789999999754322 233445666665554   999999999998743    48999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-----------------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-----------------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-----------------d~kp~nili~~~  245 (249)
                      |++|+|.+++.++. +++..+..++.|++.|+.|||                 |+||+|||+...
T Consensus       104 ~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~  167 (322)
T 3soc_A          104 HEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN  167 (322)
T ss_dssp             CTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred             CCCCCHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence            99999999998764 999999999999999999998                 579999999654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.76  E-value=2.4e-18  Score=136.85  Aligned_cols=119  Identities=22%  Similarity=0.299  Sum_probs=101.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-------------C
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES-------------D  188 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-------------~  188 (249)
                      ..+|.|.++.+|.+.+..+++.||+|.+.... ...+.+.+|+.+++.++   ||||+++++++.+             .
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~~~~~~~~   87 (303)
T 1zy4_A           12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLN---HQYVVRYYAAWLERRNFVKPMTAVKKK   87 (303)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCC---CTTBCCEEEEEEECCCCCC------CE
T ss_pred             heeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcC---chHHHHHHHHHHhhcchhhhhcccccC
Confidence            46788999999999998899999999996532 22355778888887776   9999999998865             4


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         189 QHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       189 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ..+|+||||++||+|.+++...+ .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~  151 (303)
T 1zy4_A           88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE  151 (303)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC
Confidence            57999999999999999998654 4788999999999999999999       99999999954

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.76  E-value=5.1e-18  Score=134.22  Aligned_cols=119  Identities=20%  Similarity=0.184  Sum_probs=100.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch-------hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT-------QNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.++.||.+.+..+++.||+|++........       +.+.+|+.+++.++   ||||+++++++.+..  ++|
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~--~lv   99 (287)
T 4f0f_A           25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN---HPNIVKLYGLMHNPP--RMV   99 (287)
T ss_dssp             EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC---CTTBCCEEEEETTTT--EEE
T ss_pred             hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC---CCCchhhheeecCCC--eEE
Confidence            467889999999999989999999999875433221       45677888887776   999999999987765  699


Q ss_pred             EeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~  245 (249)
                      |||+++|+|.+++.+. +.+++..+..++.|++.|+.|||         |+||+|||+...
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~  160 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSL  160 (287)
T ss_dssp             EECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCC
T ss_pred             EEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEecc
Confidence            9999999999988765 36999999999999999999999         889999999643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.76  E-value=6.1e-18  Score=136.40  Aligned_cols=115  Identities=19%  Similarity=0.259  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....   .+.+.+|+.+++.+.  +||||+++++++.+  ....++||||++
T Consensus        42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~~~lv~e~~~  116 (330)
T 3nsz_A           42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHVN  116 (330)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHT--TSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcC--CCCCEEEeeeeeccCCCCceEEEEeccC
Confidence            46788999999999998999999999986432   366889999999886  59999999999988  678999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +++|.+++..   +++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus       117 ~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~  165 (330)
T 3nsz_A          117 NTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH  165 (330)
T ss_dssp             CCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET
T ss_pred             chhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC
Confidence            9999998853   899999999999999999999       99999999964

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.76  E-value=1.4e-18  Score=139.74  Aligned_cols=121  Identities=17%  Similarity=0.245  Sum_probs=94.3

Q ss_pred             ccccCCCCcceeeccCCCCCC---eeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeE-----
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ---HVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHV-----  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~---~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~-----  191 (249)
                      ..+|.|.+|.||.+....++.   .||+|.+......  ..+.+.+|+.+++.++   ||||+++++++......     
T Consensus        29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~  105 (323)
T 3qup_A           29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD---HPHVAKLVGVSLRSRAKGRLPI  105 (323)
T ss_dssp             EEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCC---CTTBCCCCEEEECC-------C
T ss_pred             ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCC---CCceehhhceeeccccccCCCc
Confidence            467889999999998776664   8999999765322  2356778888887776   99999999999877655     


Q ss_pred             -EEEEeccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         192 -YLVMEFCNGGDLADYLVSKG------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       192 -~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       |+||||+++|+|.+++...+      .+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus       106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A          106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC
Confidence             99999999999999997643      5899999999999999999999       999999999654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.76  E-value=3.2e-18  Score=137.31  Aligned_cols=117  Identities=26%  Similarity=0.361  Sum_probs=96.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE--------------e
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE--------------S  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~--------------~  187 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++........+.+.+|+.+++.++   ||||+++++++.              +
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~~~~   93 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD---HDNIVKVFEILGPSGSQLTDDVGSLTE   93 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCC---CTTBCCEEEEECTTSCBCCC----CCS
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcC---CCCeeEEEEeccccccccccccccccc
Confidence            56788999999999999999999999997654444466788888888776   999999999873              4


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         188 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       188 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ....|+||||++ |+|.+++.+ +.+++..++.++.|++.|+.|||       |+||+||++.
T Consensus        94 ~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  154 (320)
T 2i6l_A           94 LNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN  154 (320)
T ss_dssp             CSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE
T ss_pred             cCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence            478999999997 699999975 45999999999999999999999       9999999995

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.76  E-value=1.1e-18  Score=140.55  Aligned_cols=120  Identities=24%  Similarity=0.318  Sum_probs=101.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....... ...+.+|+.+++.++   ||||+++++++.+....|+||||++ 
T Consensus         8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~-   83 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK---HANIVTLHDIIHTEKSLTLVFEYLD-   83 (324)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCC---CTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred             EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcC---CCCCCeeeeEEeeCCEEEEEecccc-
Confidence            46788999999999999999999999997543322 234567888888776   9999999999999999999999997 


Q ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++...+ .+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~  136 (324)
T 3mtl_A           84 KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER  136 (324)
T ss_dssp             EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTT
T ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCC
Confidence            59999998764 5899999999999999999999       999999999643

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=2.9e-18  Score=138.63  Aligned_cols=120  Identities=18%  Similarity=0.228  Sum_probs=101.6

Q ss_pred             ccccCCCCcceeeccCCCC----CCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAP----SQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+....+    +..||+|.+...... ....+.+|+.+++.++   ||||+++++++.+....|+|||
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e  126 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS---HHNIIRLEGVISKYKPMMIITE  126 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSEEEEEE
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEecCCCcEEEEe
Confidence            4678899999999876544    345999999754322 2345778888888776   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++... +.+++.++..++.|++.|+.|||       |+||+||++..
T Consensus       127 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~  182 (333)
T 1mqb_A          127 YMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS  182 (333)
T ss_dssp             CCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECC
Confidence            99999999999875 56999999999999999999999       99999999964

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.75  E-value=2.8e-18  Score=137.53  Aligned_cols=121  Identities=21%  Similarity=0.268  Sum_probs=102.1

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-eEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQ-HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-~~~lv  194 (249)
                      ..+|.|.+|.||.+.     ...+++.||+|.+....... .+.+.+|+.+++.+.  +||||+++++++...+ .+|+|
T Consensus        33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~hp~iv~~~~~~~~~~~~~~lv  110 (316)
T 2xir_A           33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVI  110 (316)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECCTTSCCEEE
T ss_pred             eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc--cCCCeeeEEEEEecCCCceEEE
Confidence            467889999999986     45677899999997653322 356788999988884  4999999999987654 59999


Q ss_pred             EeccCCCCHHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGT----------------LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~----------------~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++||+|.+++...+.                +++..+..++.|++.|+.|||       |+||+||++..
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~  183 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  183 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC
Confidence            999999999999987653                889999999999999999999       99999999964

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.75  E-value=2.7e-18  Score=141.46  Aligned_cols=114  Identities=18%  Similarity=0.307  Sum_probs=96.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--------------
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--------------  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--------------  187 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....    ....+|+.+++.++   ||||++++++|..              
T Consensus        13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~~~~~~~~~   85 (383)
T 3eb0_A           13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLD---HVNIIKLVDYFYTTGDEEPKPPQPPDD   85 (383)
T ss_dssp             EEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCC---CTTBCCEEEEEEEC-------------
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcC---CCCccchhheeeecCcccccccccccc
Confidence            56899999999999999999999999986542    33457888888776   9999999999844              


Q ss_pred             ------------------------CCeEEEEEeccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh------
Q psy4166         188 ------------------------DQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH------  233 (249)
Q Consensus       188 ------------------------~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh------  233 (249)
                                              ..++|+||||++ |+|.+.+..    .+.+++..++.++.|++.|+.|||      
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H  164 (383)
T 3eb0_A           86 HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICH  164 (383)
T ss_dssp             ------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred             cccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCcc
Confidence                                    345999999997 587777753    467999999999999999999999      


Q ss_pred             -cCCccceeee
Q psy4166         234 -DFTPWSFVIL  243 (249)
Q Consensus       234 -d~kp~nili~  243 (249)
                       |+||+|||+.
T Consensus       165 ~Dikp~Nil~~  175 (383)
T 3eb0_A          165 RDIKPQNLLVN  175 (383)
T ss_dssp             SCCCGGGEEEE
T ss_pred             CccCHHHEEEc
Confidence             9999999995

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.75  E-value=5.9e-18  Score=137.74  Aligned_cols=120  Identities=25%  Similarity=0.336  Sum_probs=101.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--------CCeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES--------DQHV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--------~~~~  191 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  ...+.+|+.+++.++   ||||+++++++.+        .+.+
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~~   99 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK---HENVVNLIEICRTKASPYNRCKGSI   99 (351)
T ss_dssp             EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCC---CTTBCCEEEEEEEC--------CEE
T ss_pred             EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhcc---CCCcccHhheeeccccccccCCceE
Confidence            56889999999999999999999999987654322  245678999988877   9999999999987        4569


Q ss_pred             EEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         192 YLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+||||+++ +|.+.+... +.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus       100 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~  160 (351)
T 3mi9_A          100 YLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD  160 (351)
T ss_dssp             EEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             EEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC
Confidence            999999975 888887764 56999999999999999999999       999999999643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.75  E-value=3.6e-18  Score=134.55  Aligned_cols=120  Identities=22%  Similarity=0.341  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ..+|.|.++.+|.+.+..+++.||+|.+.......  .+.+.+|+.+++.++   ||||+++++++.+  ...+|+||||
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv~e~   88 (279)
T 2w5a_A           12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK---HPNIVRYYDRIIDRTNTTLYIVMEY   88 (279)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEEEGGGTEEEEEEEC
T ss_pred             hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcC---CCCCCeEEEEEecCCCceEEEEEeC
Confidence            46788999999999999999999999998654322  356778888888876   9999999998754  6789999999


Q ss_pred             cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHhh------------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG----TLSEDTIRIFLKLHQMLQLYFH------------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~ylh------------d~kp~nili~~  244 (249)
                      ++||+|.+++...+    .+++..+..++.|++.|+.|||            |+||+||++..
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~  151 (279)
T 2w5a_A           89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG  151 (279)
T ss_dssp             CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECS
T ss_pred             CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcC
Confidence            99999999998642    4999999999999999999988            78999999964

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.75  E-value=5.2e-18  Score=137.34  Aligned_cols=114  Identities=16%  Similarity=0.239  Sum_probs=95.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHH-HHHhhhcCCCCeeeeeEeEEe----CCeEEEEEec
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINI-LKELTELHHENVVELLHCKES----DQHVYLVMEF  197 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~-~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e~  197 (249)
                      .+|.|.+|.||.+.+..+++.||+|++....     ...+|+.. ++.+   +||||+++++++..    ...+|+||||
T Consensus        36 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~---~h~~i~~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQAS---GGPHIVCILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHT---TSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhc---CCCChHHHHHHHhhccCCCceEEEEEec
Confidence            4788999999999999999999999996532     22333333 3333   59999999999976    5569999999


Q ss_pred             cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+||+|.+++.+.+  .+++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~  163 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTS  163 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEe
Confidence            99999999998764  5999999999999999999999       99999999964

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.75  E-value=3.9e-18  Score=137.36  Aligned_cols=120  Identities=16%  Similarity=0.150  Sum_probs=100.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.. .+++.||+|++....... ...+.+|+.+++.+.   ||||+++++++.+....|+||||+++
T Consensus        36 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~  111 (326)
T 3uim_A           36 NILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLVYPYMAN  111 (326)
T ss_dssp             TEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCC---CTTBCCCCEEECCSSCCEEEEECCTT
T ss_pred             eeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhcc---CCCccceEEEEecCCceEEEEEeccC
Confidence            5678899999999874 468999999997654332 235778888777665   99999999999999999999999999


Q ss_pred             CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHhh----------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG----TLSEDTIRIFLKLHQMLQLYFH----------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~ylh----------d~kp~nili~~~  245 (249)
                      |+|.+++....    .+++..+..++.|++.|+.|||          |+||+|||+...
T Consensus       112 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A          112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             CBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred             CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence            99999998753    3899999999999999999999          789999999754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.75  E-value=9.2e-18  Score=137.32  Aligned_cols=117  Identities=14%  Similarity=0.090  Sum_probs=93.9

Q ss_pred             ccccCCCCcceeeccCCCC-----CCeeEEEEeecccccchhcHHHHHHHHH------------HhhhcCCCCeeeeeEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAP-----SQHVAIKRITKKNLAKTQNFGKEINILK------------ELTELHHENVVELLHC  184 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~e~~~~~------------~~~~~~h~niv~l~~~  184 (249)
                      ..+|.|.+|.||++.+..+     ++.||+|.+.....    ...+|+.+++            .+..++|+||++++++
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~  116 (364)
T 3op5_A           41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG----PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS  116 (364)
T ss_dssp             EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH----HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred             EEEecCCCeEEEEeeecCccccccccceEEEEeeccch----hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence            5689999999999977554     68899999876431    2233333332            2234469999999999


Q ss_pred             EEeC----CeEEEEEeccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         185 KESD----QHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       185 ~~~~----~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +...    ...|+||||| ||+|.+++... +.+++..+..++.|++.||.|||       |+||+|||+.
T Consensus       117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~  186 (364)
T 3op5_A          117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             eeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEe
Confidence            8764    5699999999 99999999876 57999999999999999999999       9999999997

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.75  E-value=3.7e-18  Score=143.92  Aligned_cols=118  Identities=20%  Similarity=0.319  Sum_probs=99.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....  ..+.+.+|+.+++.++   ||||+++++++...      ..+|+
T Consensus        68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~~~~~~~~~~~~~~~l  144 (464)
T 3ttj_A           68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYL  144 (464)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCC---CCCCCcEEEEEccCCccccCCeEEE
Confidence            5689999999999999999999999999864222  2355778888888776   99999999999654      46899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||||++ +|.+.+..  .+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus       145 v~E~~~~-~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~  200 (464)
T 3ttj_A          145 VMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD  200 (464)
T ss_dssp             EEECCSE-EHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             EEeCCCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCC
Confidence            9999975 67777754  4999999999999999999999       999999999643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.75  E-value=2.4e-18  Score=139.79  Aligned_cols=120  Identities=16%  Similarity=0.095  Sum_probs=94.4

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeecccccc-----------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLAK-----------TQNFGKEINILKELTELHHENVVELLHCKES  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~~-----------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~  187 (249)
                      ..+|.|.+|.||.+....   ++..+|+|.........           ...+.+|+..++.+.   ||||+++++++.+
T Consensus        43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~---h~ni~~~~~~~~~  119 (345)
T 2v62_A           43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD---YLGIPLFYGSGLT  119 (345)
T ss_dssp             EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS---CCCCCCEEEEEEE
T ss_pred             eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc---ccCcceeeccccc
Confidence            467889999999999876   78899999987643211           112345555555554   9999999999988


Q ss_pred             ----CCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         188 ----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       188 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                          ....|+||||+ |++|.+++...+.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus       120 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  187 (345)
T 2v62_A          120 EFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK  187 (345)
T ss_dssp             ESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS
T ss_pred             ccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC
Confidence                78999999999 9999999998878999999999999999999999       999999999754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.75  E-value=4.9e-18  Score=134.01  Aligned_cols=120  Identities=17%  Similarity=0.304  Sum_probs=99.4

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+....   .+..||+|.+...... ..+.+.+|+.+++.++   ||||+++++++. .+..|+||||
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~-~~~~~lv~e~   96 (281)
T 1mp8_A           21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD---HPHIVKLIGVIT-ENPVWIIMEL   96 (281)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCC---CCccceEEEEEc-cCccEEEEec
Confidence            467889999999987654   3557999988653222 2355778888888776   999999999985 5678999999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|+|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~  152 (281)
T 1mp8_A           97 CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN  152 (281)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC
Confidence            99999999998764 5999999999999999999999       999999999743

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.75  E-value=2.9e-18  Score=144.26  Aligned_cols=118  Identities=18%  Similarity=0.261  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+... .+..||+|.+..... ..+.+.+|+.+++.++   ||||+++++++. ....|+|||||++|
T Consensus       194 ~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~---h~~iv~l~~~~~-~~~~~lv~e~~~~g  267 (454)
T 1qcf_A          194 KKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ---HDKLVKLHAVVT-KEPIYIITEFMAKG  267 (454)
T ss_dssp             EEEECCSSEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHTTCC---CTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             EEcccCCceEEEEEEEC-CccEEEEEEecCCCc-cHHHHHHHHHHHhhCC---CCCEeeEEEEEe-CCccEEEEeecCCC
Confidence            46789999999998764 467899999976442 3467889999988776   999999999986 56799999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+.+  .+++..+..++.|++.||.|||       |+||+|||+...
T Consensus       268 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~  320 (454)
T 1qcf_A          268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS  320 (454)
T ss_dssp             BHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCC
Confidence            9999998642  5899999999999999999999       999999999753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=9e-18  Score=132.88  Aligned_cols=119  Identities=20%  Similarity=0.291  Sum_probs=99.8

Q ss_pred             cccCCCCcceeeccC--CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLS--PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+..  ...+..||+|.+...... ..+.+.+|+.+++.++   ||||+++++++ ..+..|+||||++
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~-~~~~~~lv~e~~~   92 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD---NPYIVRLIGVC-QAEALMLVMEMAG   92 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEE-ESSSEEEEEECCT
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCC---CCCEeEEEEEe-cCCCcEEEEEeCC
Confidence            678899999998864  346788999999764322 2356788999988876   99999999999 4567999999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+|.+++... +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        93 ~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~  146 (287)
T 1u59_A           93 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR  146 (287)
T ss_dssp             TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET
T ss_pred             CCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC
Confidence            99999999754 45999999999999999999999       999999999653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.75  E-value=3.4e-18  Score=134.10  Aligned_cols=117  Identities=21%  Similarity=0.278  Sum_probs=95.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.++.||.+..  .+..||+|++.......    .+.+.+|+.+++.++   ||||+++++++.+....|+||||
T Consensus        13 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~   87 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK---HPNIIALRGVCLKEPNLCLVMEF   87 (271)
T ss_dssp             EEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCC---CTTBCCEEEEECCC--CEEEEEC
T ss_pred             eeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC---CCCEeeEEEEEecCCceEEEEEc
Confidence            4678899999999876  48899999987643322    245778888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh----------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH----------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh----------d~kp~nili~~  244 (249)
                      ++||+|.+++... .+++..+..++.|++.|+.|||          |+||+||++..
T Consensus        88 ~~~~~L~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~  143 (271)
T 3dtc_A           88 ARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ  143 (271)
T ss_dssp             CTTEEHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESS
T ss_pred             CCCCCHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEec
Confidence            9999999999654 5999999999999999999998          78999999975

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.75  E-value=8.6e-18  Score=135.74  Aligned_cols=121  Identities=20%  Similarity=0.295  Sum_probs=103.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE--------eCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKE--------SDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~--------~~~~~~l  193 (249)
                      ..+|.|.++.||.+.+..+++.||+|++........+.+.+|+.+++.+.  +||||+++++++.        ....+|+
T Consensus        34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--~h~~iv~~~~~~~~~~~~~~~~~~~~~l  111 (337)
T 3ll6_A           34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS--GHPNIVQFCSAASIGKEESDTGQAEFLL  111 (337)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT--TSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred             EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc--cCCChhhccccccccccccccCCceEEE
Confidence            46789999999999998999999999987655444466788888888875  5999999999984        3456999


Q ss_pred             EEeccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVS---KGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~~  245 (249)
                      +|||+. |+|.+++..   .+.+++..+..++.|++.|+.|||         |+||+|||+...
T Consensus       112 v~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~  174 (337)
T 3ll6_A          112 LTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ  174 (337)
T ss_dssp             EEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT
T ss_pred             EEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC
Confidence            999995 799999876   456999999999999999999999         889999999753

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.75  E-value=8e-18  Score=133.84  Aligned_cols=120  Identities=23%  Similarity=0.337  Sum_probs=100.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.+|.+|.+.+..+++.||+|++.......  ...+.+|+.+++.+.   ||||+++++++.+.+.+|+||||++
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~   85 (299)
T 2r3i_A            9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---HPNIVKLLDVIHTENKLYLVFEFLH   85 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcC---CCCeeeEEEEEecCCceEEEEEccc
Confidence            46788999999999998899999999987543222  245678888887765   9999999999999999999999997


Q ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                       |+|.+++...  +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        86 -~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~  139 (299)
T 2r3i_A           86 -QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE  139 (299)
T ss_dssp             -EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             -CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCC
Confidence             6999999876  45899999999999999999999       999999999643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.75  E-value=4.2e-18  Score=148.16  Aligned_cols=119  Identities=19%  Similarity=0.293  Sum_probs=100.7

Q ss_pred             cccCCCCcceeeccCC--CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSP--APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      .+|.|.+|.||.+...  ..+..||+|++...... ..+.+.+|+.+++.++   |||||++++++.+ +.+|+|||||+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~---hpniv~l~~~~~~-~~~~lv~E~~~  418 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD---NPYIVRLIGVCQA-EALMLVMEMAG  418 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCC---CTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCC---CCCEeeEEEEecc-CCeEEEEEeCC
Confidence            4688999999987653  45667999999765322 2366888999988776   9999999999976 56999999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++... +.+++.++..++.|++.||.|||       |+||+||||...
T Consensus       419 ~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~  472 (613)
T 2ozo_A          419 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR  472 (613)
T ss_dssp             TCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCC
Confidence            99999999764 45999999999999999999999       999999999753

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.75  E-value=1.1e-17  Score=133.62  Aligned_cols=119  Identities=20%  Similarity=0.187  Sum_probs=102.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc----cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL----AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+..  .+..||+|.+.....    ...+.+.+|+.+++.++   ||||+++++++.+....|+||||
T Consensus        37 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~  111 (307)
T 2nru_A           37 NKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ---HENLVELLGFSSDGDDLCLVYVY  111 (307)
T ss_dssp             CEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEEEC
T ss_pred             CccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC---CCCeEEEEEEEecCCceEEEEEe
Confidence            4678899999999875  588999999875422    11356778998888876   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSK---GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|+|.+++...   ..+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~  169 (307)
T 2nru_A          112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA  169 (307)
T ss_dssp             CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence            9999999999743   45899999999999999999999       999999999643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.74  E-value=1.1e-17  Score=139.67  Aligned_cols=122  Identities=19%  Similarity=0.227  Sum_probs=105.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhc---CCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTEL---HHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~---~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++..... ..+.+.+|+.+++.+...   +|+||+++++++.....+|+||||+
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  181 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL  181 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred             EEcccCccEEEEEEEECCCCcEEEEEEECCccc-hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence            467899999999999999999999999975422 225577888888887643   5889999999999999999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      . |+|.+++...+  .+++..++.++.|++.||.|||       |+||+|||+...
T Consensus       182 ~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~  236 (429)
T 3kvw_A          182 S-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ  236 (429)
T ss_dssp             C-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESST
T ss_pred             C-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccC
Confidence            5 69999998764  4899999999999999999999       999999999754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.74  E-value=9.8e-18  Score=135.19  Aligned_cols=120  Identities=15%  Similarity=0.156  Sum_probs=95.7

Q ss_pred             ccccCCCCcceeeccCCCCCCee----EEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHV----AIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~v----avK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+.+..+++.+    |+|.+..... ...+.+.+|+.+++.++   ||||+++++++.+.. .++|||
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~-~~~v~e   96 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD---NPHVCRLLGICLTST-VQLITQ   96 (327)
T ss_dssp             EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCC---BTTBCCEEEEEESSS-EEEEEE
T ss_pred             eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCC-eEEEEE
Confidence            56788999999999877776655    7777654322 22356788999998887   999999999998754 789999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+++|+|.+++.+. +.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~  153 (327)
T 3poz_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  153 (327)
T ss_dssp             CCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCC
Confidence            99999999999874 56999999999999999999999       999999999653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.74  E-value=2.1e-18  Score=140.09  Aligned_cols=118  Identities=17%  Similarity=0.261  Sum_probs=102.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch-----------------hcHHHHHHHHHHhhhcCCCCeeeeeEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT-----------------QNFGKEINILKELTELHHENVVELLHC  184 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------~~~~~e~~~~~~~~~~~h~niv~l~~~  184 (249)
                      ..+|.|.++.||.+..  +++.||+|.+........                 +.+.+|+.+++.++   ||||++++++
T Consensus        37 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~  111 (348)
T 2pml_X           37 RTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK---NEYCLTCEGI  111 (348)
T ss_dssp             EEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC---CTTBCCCSEE
T ss_pred             EEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC---CCCcceEEEE
Confidence            4678999999999987  899999999986533221                 55778888888776   9999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         185 KESDQHVYLVMEFCNGGDLADY------LVS--KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       185 ~~~~~~~~lv~e~~~~g~L~~~------l~~--~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      +.+.+.+|+||||++||+|.++      +.+  .+.+++..+..++.|++.|+.|||        |+||+||++..
T Consensus       112 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK  187 (348)
T ss_dssp             EESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECT
T ss_pred             EeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcC
Confidence            9999999999999999999998      665  467999999999999999999999        79999999954

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.74  E-value=4.5e-18  Score=137.05  Aligned_cols=119  Identities=17%  Similarity=0.158  Sum_probs=98.5

Q ss_pred             ccccCCCCcceeeccCCCCCCe----eEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQH----VAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~----vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+.+..++..    ||+|.+..... ...+.+.+|+.+++.++   ||||+++++++. ....|+|||
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~-~~~~~~v~e   94 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD---HAHIVRLLGLCP-GSSLQLVTQ   94 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCC---CTTBCCEEEEEC-BSSEEEEEE
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCC---CCCcCeEEEEEc-CCccEEEEE
Confidence            5688999999999988777776    56666643321 12245678888888776   999999999886 456899999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~  150 (325)
T 3kex_A           95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS  150 (325)
T ss_dssp             CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESS
T ss_pred             eCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECC
Confidence            99999999999875 46999999999999999999999       99999999954

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.74  E-value=4.8e-18  Score=142.86  Aligned_cols=118  Identities=19%  Similarity=0.236  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.... +..||+|++..... ..+.+.+|+.+++.++   ||||+++++++.+ ...|+|||||++|
T Consensus       190 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~-~~~~iv~e~~~~g  263 (452)
T 1fmk_A          190 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLR---HEKLVQLYAVVSE-EPIYIVTEYMSKG  263 (452)
T ss_dssp             EEEEECSSCEEEEEEETT-TEEEEEEECCTTSS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             eeecCCCCeEEEEEEECC-CceEEEEEeccCCC-CHHHHHHHHHHHHhCC---CCCEeeEEEEEcC-CceEEEehhhcCC
Confidence            457889999999987754 46799999976442 2367889999999887   9999999999876 6789999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...  ..+++.++..++.|++.||.|||       |+||+|||+...
T Consensus       264 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~  316 (452)
T 1fmk_A          264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN  316 (452)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCC
Confidence            999999753  45999999999999999999999       999999999643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=4e-18  Score=138.56  Aligned_cols=120  Identities=23%  Similarity=0.339  Sum_probs=101.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.++.||.+.+..+++.||+|.+.......     .+.+.+|+.+++.++   ||||+++++++.+....|+|||
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e   92 (346)
T 1ua2_A           16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS---HPNIIGLLDAFGHKSNISLVFD   92 (346)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC---CTTBCCEEEEECCTTCCEEEEE
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC---CCCCCeEEEEEeeCCceEEEEE
Confidence            56788999999999999999999999997543221     245778999988876   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+++ +|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        93 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~  148 (346)
T 1ua2_A           93 FMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN  148 (346)
T ss_dssp             CCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCC
Confidence            9975 8999988753 5899999999999999999999       999999999643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.74  E-value=1.4e-17  Score=133.88  Aligned_cols=121  Identities=21%  Similarity=0.247  Sum_probs=107.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+.......      .+.+.+|+.+++.+.. .|+||+++++++.+....++||
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~~~i~~~~~~~~~~~~~~lv~  127 (320)
T 3a99_A           49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFSGVIRLLDWFERPDSFVLIL  127 (320)
T ss_dssp             EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS-SSCSBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc-CCCCceEEEEEEecCCcEEEEE
Confidence            56889999999999988999999999998654322      2457789999998861 3699999999999999999999


Q ss_pred             eccCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         196 EFCNG-GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |++.+ ++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus       128 e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  183 (320)
T 3a99_A          128 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID  183 (320)
T ss_dssp             ECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred             EcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe
Confidence            99976 899999998888999999999999999999999       9999999996

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.74  E-value=1.4e-17  Score=131.44  Aligned_cols=120  Identities=19%  Similarity=0.255  Sum_probs=100.2

Q ss_pred             ccccCCCCcceeeccC---CCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.++.||.+..   ..++..||+|.+..... ...+.+.+|+.+++.++   ||||+++++++.+. ..|+||||
T Consensus        18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~-~~~~v~e~   93 (281)
T 3cc6_A           18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD---HPHIVKLIGIIEEE-PTWIIMEL   93 (281)
T ss_dssp             EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHC---CTTBCCEEEEECSS-SCEEEEEC
T ss_pred             EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCC---CCCcceEEEEEcCC-CCEEEEec
Confidence            4678899999998874   33455799999976532 22366888999999887   99999999998754 56899999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|+|.+++.+.+ .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~  149 (281)
T 3cc6_A           94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP  149 (281)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEET
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCC
Confidence            99999999998754 5999999999999999999999       999999999653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.74  E-value=6.8e-18  Score=140.02  Aligned_cols=116  Identities=22%  Similarity=0.299  Sum_probs=93.5

Q ss_pred             cccCCCCcceeeccCC--CCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSP--APSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~~  198 (249)
                      .+|.|.+|.||++...  .+++.||+|++.....  ...+.+|+.+++.++   ||||+++++++..  ...+|+||||+
T Consensus        28 ~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~~~lv~e~~  102 (405)
T 3rgf_A           28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELK---HPNVISLQKVFLSHADRKVWLLFDYA  102 (405)
T ss_dssp             CCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCC---CTTBCCCCEEEEETTTTEEEEEEECC
T ss_pred             EeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcC---CCCeeeEeeEEecCCCCeEEEEEeCC
Confidence            5788999999999844  5789999999975432  246788999999887   9999999999954  77899999999


Q ss_pred             CCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG---------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + |+|.+++...+         .+++..++.++.|++.||.|||       |+||+|||+..
T Consensus       103 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~  163 (405)
T 3rgf_A          103 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMG  163 (405)
T ss_dssp             S-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECC
T ss_pred             C-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEec
Confidence            6 58998887432         4999999999999999999999       99999999953

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.73  E-value=3.7e-18  Score=137.21  Aligned_cols=121  Identities=21%  Similarity=0.230  Sum_probs=101.3

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+...     .+++.||+|.+...... ....+.+|+.+++.+.   ||||+++++++.+....|+||
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~  107 (322)
T 1p4o_A           31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN---CHHVVRLLGVVSQGQPTLVIM  107 (322)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcC---CCCEeeeEEEEccCCccEEEE
Confidence            46788999999987654     45788999999754322 2245677888877765   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK----------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~----------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++||+|.+++...          ..+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~  174 (322)
T 1p4o_A          108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED  174 (322)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT
T ss_pred             EeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC
Confidence            999999999999863          34689999999999999999999       999999999653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.73  E-value=2.3e-17  Score=132.77  Aligned_cols=122  Identities=20%  Similarity=0.259  Sum_probs=104.0

Q ss_pred             ccccCCCCcceeeccCC-CCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-----eCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-APSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKE-----SDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-----~~~~~~l  193 (249)
                      ..+|.|.+|.||.+.+. .+++.||+|++.......  ...+.+|+.+++.+..++||||+++++++.     .....|+
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   96 (326)
T 1blx_A           17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   96 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred             eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence            56788999999999874 678899999997654322  246778999999887677999999999987     5678999


Q ss_pred             EEeccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||++ |+|.+++....  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        97 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~  155 (326)
T 1blx_A           97 VFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS  155 (326)
T ss_dssp             EEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             EEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcC
Confidence            999997 69999998753  4999999999999999999999       99999999964

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.73  E-value=1.2e-17  Score=133.27  Aligned_cols=119  Identities=25%  Similarity=0.374  Sum_probs=99.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEE--eCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA----KTQNFGKEINILKELTELHHENVVELLHCKE--SDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~--~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+......    ....+.+|+.+++.++   ||||+++++++.  +....|+||
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~~~lv~   87 (305)
T 2wtk_C           11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR---HKNVIQLVDVLYNEEKQKMYMVM   87 (305)
T ss_dssp             CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC---CTTBCCEEEEEECC---CEEEEE
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC---CCCeeEEEEEEEcCCCCeEEEEe
Confidence            5678899999999999999999999999865322    2355778888887776   999999999984  456899999


Q ss_pred             eccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVS--KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++| |.+++..  .+.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus        88 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~  144 (305)
T 2wtk_C           88 EYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTT  144 (305)
T ss_dssp             ECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             hhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcC
Confidence            999876 8888876  346999999999999999999999       99999999964

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.73  E-value=7e-18  Score=133.88  Aligned_cols=78  Identities=23%  Similarity=0.425  Sum_probs=67.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |+.||.+.+..++...+.....  +..|..+++++.+||.+||+.||++||++.++.
T Consensus       204 ~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV--LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC--CCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            4689999999999999999999 9999999998888776665443  345778999999999999999999999999984


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      .
T Consensus       282 ~  282 (299)
T 4asz_A          282 T  282 (299)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.73  E-value=1.1e-17  Score=136.78  Aligned_cols=119  Identities=25%  Similarity=0.306  Sum_probs=102.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....... .+.+.+|+.+++.++   ||||+++++++...     ..+|+||
T Consensus        33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~iv~  109 (364)
T 3qyz_A           33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR---HENIIGINDIIRAPTIEQMKDVYIVQ  109 (364)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCC---CTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred             EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcC---CCCCccceeEEecCCccccceEEEEE
Confidence            56789999999999998999999999997543222 256778999888876   99999999999765     4799999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++ |+|.+++... .+++.++..++.|++.|+.|||       |+||+|||+..+
T Consensus       110 e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~  164 (364)
T 3qyz_A          110 DLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT  164 (364)
T ss_dssp             ECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             cccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCC
Confidence            9996 5999999765 4999999999999999999999       999999999654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.73  E-value=6.3e-18  Score=144.94  Aligned_cols=118  Identities=19%  Similarity=0.236  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+.... +..||+|++..... ..+.+.+|+.+++.++   |+||+++++++.+ ..+|||||||++|
T Consensus       273 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~---hpniv~~~~~~~~-~~~~lv~e~~~~g  346 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLR---HEKLVQLYAVVSE-EPIYIVTEYMSKG  346 (535)
T ss_dssp             EEEEECSSEEEEEEEETT-TEEEEEEEECTTSS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred             eecccCCCeEEEEEEECC-CceEEEEEeCCCCC-CHHHHHHHHHHHHhCC---CCCEeeEEEEEee-ccceEeeehhcCC
Confidence            357889999999987754 46799999976442 2367889999999887   9999999999876 6799999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...  ..+++.++..++.|++.||.|||       |+||+|||+...
T Consensus       347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~  399 (535)
T 2h8h_A          347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN  399 (535)
T ss_dssp             EHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCC
Confidence            999999753  45999999999999999999999       999999999643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.73  E-value=1.4e-17  Score=137.44  Aligned_cols=122  Identities=20%  Similarity=0.238  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcC-----CCCeeeeeEeEE----eCCeEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELH-----HENVVELLHCKE----SDQHVY  192 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~-----h~niv~l~~~~~----~~~~~~  192 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.... ...+.+.+|+.+++.+...+     |+||+++++++.    +...+|
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~  121 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC  121 (397)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred             EEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence            46788999999999998999999999997542 22356788999999887433     888999999998    566899


Q ss_pred             EEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         193 LVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       193 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      +||||+ +|+|.+.+.+.  +.+++..++.++.|++.||.|||        |+||+||||...
T Consensus       122 lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~  183 (397)
T 1wak_A          122 MVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             EEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred             EEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence            999999 66777777654  46999999999999999999999        899999999743

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.73  E-value=2.5e-17  Score=130.34  Aligned_cols=120  Identities=15%  Similarity=0.159  Sum_probs=95.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....... ......|...  .+..++||||+++++++.+.+..|+||||++ 
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-   89 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFYGALFREGDVWICMELMD-   89 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHH--HHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred             HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHH--HHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence            56788999999999999999999999997643222 1122222222  2334469999999999999999999999997 


Q ss_pred             CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      |+|.+++..    .+.+++..++.++.|++.|+.|||        |+||+||++..
T Consensus        90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~  145 (290)
T 3fme_A           90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA  145 (290)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECT
T ss_pred             cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC
Confidence            588887764    457999999999999999999999        89999999965

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.73  E-value=5.3e-18  Score=138.87  Aligned_cols=119  Identities=22%  Similarity=0.364  Sum_probs=93.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++......  ..+.+.+|+.+++.++   ||||+++++++...      ..+|+
T Consensus        35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~~~~~~~l  111 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK---HENVIGLLDVFTPARSLEEFNDVYL  111 (367)
T ss_dssp             EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred             eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEecCCccccCCeEEE
Confidence            5688999999999999999999999999754221  2355778888888776   99999999998754      56899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+ +++|.+++.. +.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus       112 v~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~  168 (367)
T 2fst_X          112 VTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED  168 (367)
T ss_dssp             EEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             Eeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCC
Confidence            99999 7899999976 45999999999999999999999       999999999643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=7.8e-18  Score=133.80  Aligned_cols=121  Identities=15%  Similarity=0.139  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCCC---CCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeE-EEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAP---SQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHV-YLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~-~lv~e  196 (249)
                      ..+|.|.+|.||.+....+   +..+|+|.+...... ..+.+.+|+.+++.++   ||||+++++++.+.+.. ++|||
T Consensus        27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN---HPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC---CTTBCCCCEEECCSSSCCEEEEC
T ss_pred             ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEecCCCCcEEEEe
Confidence            4578899999999875433   347999998753322 2356778888888776   99999999999876654 99999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+.+|+|.+++... +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~  160 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES  160 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            99999999999873 46899999999999999999999       999999999654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.73  E-value=1.8e-17  Score=135.94  Aligned_cols=118  Identities=19%  Similarity=0.309  Sum_probs=100.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC------eEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ------HVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~------~~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++....      .+|+
T Consensus        31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~~~~~~~l  107 (371)
T 2xrw_A           31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYI  107 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCC---CTTBCCEEEEECSCCSTTTCCEEEE
T ss_pred             eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcC---CCCccceEEeeccccccccccceEE
Confidence            46788999999999998999999999997643222  245678888888776   999999999997654      7999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||++ |+|.+++..  .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       108 v~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~  163 (371)
T 2xrw_A          108 VMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD  163 (371)
T ss_dssp             EEECCS-EEHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             EEEcCC-CCHHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC
Confidence            999997 589998863  4999999999999999999999       999999999643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.73  E-value=1.4e-17  Score=133.33  Aligned_cols=121  Identities=19%  Similarity=0.233  Sum_probs=95.3

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----eE
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ-----HV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----~~  191 (249)
                      ..+|.|.++.||.+....   ++..||+|.+.......  .+.+.+|+.+++.++   ||||+++++++.+..     ..
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~  116 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS---HPNVIRLLGVCIEMSSQGIPKP  116 (313)
T ss_dssp             EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCC---CTTBCCCCEEEEC-------CE
T ss_pred             cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCC---CCCeeeeeEEEeeccccCCccc
Confidence            457889999999876433   56689999987543222  245778888888776   999999999998754     46


Q ss_pred             EEEEeccCCCCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         192 YLVMEFCNGGDLADYLVS------KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+||||+++|+|.+++..      .+.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       117 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~  183 (313)
T 3brb_A          117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD  183 (313)
T ss_dssp             EEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT
T ss_pred             EEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            999999999999999953      346999999999999999999999       999999999653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.73  E-value=7.1e-18  Score=134.42  Aligned_cols=79  Identities=16%  Similarity=0.325  Sum_probs=69.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |+.||.+.+..++...+.....  ++.|..+++++.+|+.+||+.||.+||++.+|+
T Consensus       221 ~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~  298 (308)
T 4gt4_A          221 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV--LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIH  298 (308)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCcccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            4679999999999999999998 9999999998888776665433  345778999999999999999999999999997


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       299 ~~  300 (308)
T 4gt4_A          299 SR  300 (308)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.73  E-value=1.3e-17  Score=132.69  Aligned_cols=116  Identities=16%  Similarity=0.234  Sum_probs=96.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+..  +++.||+|++....   ...+.+|..++.... ++||||+++++++..    ...+|+||||
T Consensus        14 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~-l~h~niv~~~~~~~~~~~~~~~~~lv~e~   87 (301)
T 3q4u_A           14 ECVGKGRYGEVWRGSW--QGENVAVKIFSSRD---EKSWFRETELYNTVM-LRHENILGFIASDMTSRHSSTQLWLITHY   87 (301)
T ss_dssp             EEEEECSSEEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHHHTC-CCCTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             EeeccCCCcEEEEEEE--CCEEEEEEEecccc---chhhHHHHHHHHHhh-ccCcCeeeEEEeeccccCCCceeEEehhh
Confidence            5678899999999875  68899999986542   244566777766532 459999999998654    3569999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------------d~kp~nili~~  244 (249)
                      +++|+|.++++.. .+++..+..++.|++.|+.|||               |+||+|||+..
T Consensus        88 ~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~  148 (301)
T 3q4u_A           88 HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK  148 (301)
T ss_dssp             CTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECT
T ss_pred             ccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcC
Confidence            9999999999654 5999999999999999999999               89999999964

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.73  E-value=1e-17  Score=134.69  Aligned_cols=79  Identities=20%  Similarity=0.376  Sum_probs=68.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |+.||.+.+..++...+....  .+..|..+++++.+||.+||+.||++||++.+++
T Consensus       234 ~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~--~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~  311 (329)
T 4aoj_A          234 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR--ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVH  311 (329)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHH
T ss_pred             CCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHH
Confidence            5789999999999999999999 999999998888776665543  3455778999999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      .+
T Consensus       312 ~~  313 (329)
T 4aoj_A          312 AR  313 (329)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=136.30  Aligned_cols=115  Identities=15%  Similarity=0.069  Sum_probs=98.4

Q ss_pred             ccccCCCCcceeeccCCC--------CCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeee-------------
Q psy4166         122 DVVSTSPPRPSSLLLSPA--------PSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVE-------------  180 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~-------------  180 (249)
                      ..+|.|.+|.||.+....        .++.||+|.+...     +.+.+|+.+++.++   ||||++             
T Consensus        48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~i  119 (352)
T 2jii_A           48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAA---KPLQVNKWKKLYSTPLLAI  119 (352)
T ss_dssp             EEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHC---CHHHHHHHHHHTTCTTCSC
T ss_pred             EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhc---ccchhhhhhhhccCCccCc
Confidence            467889999999998877        4889999998754     46788999999887   999887             


Q ss_pred             --eeEeEEe-CCeEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         181 --LLHCKES-DQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       181 --l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                        +++++.. ....|+||||+ +|+|.+++...  +.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus       120 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~  195 (352)
T 2jii_A          120 PTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE  195 (352)
T ss_dssp             CCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT
T ss_pred             cchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC
Confidence              5667765 78899999999 99999999986  67999999999999999999999       999999999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.73  E-value=9.2e-18  Score=132.22  Aligned_cols=118  Identities=17%  Similarity=0.286  Sum_probs=100.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+... .+..||+|.+..... ..+.+.+|+.+++.++   ||||+++++++.+ +..|+||||++||
T Consensus        19 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~-~~~~~v~e~~~~~   92 (279)
T 1qpc_A           19 ERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQ---HQRLVRLYAVVTQ-EPIYIITEYMENG   92 (279)
T ss_dssp             EEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred             eeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCC---CcCcceEEEEEcC-CCcEEEEecCCCC
Confidence            46788999999998754 567899999976432 2366788999998886   9999999998764 5689999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++...+  .+++.++..++.|++.|+.|||       |+||+||++..+
T Consensus        93 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~  145 (279)
T 1qpc_A           93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT  145 (279)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCC
Confidence            9999997643  6999999999999999999999       999999999654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.72  E-value=1.2e-17  Score=132.76  Aligned_cols=121  Identities=17%  Similarity=0.178  Sum_probs=98.2

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeE-EeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCK-ESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~-~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+....   ....+|+|.+...... ..+.+.+|+.+++.++   ||||+++++++ ......|+|||
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~v~e  107 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS---HPNVLSLLGICLRSEGSPLVVLP  107 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC---CTTBCCCCEEECCSSSCCEEEEE
T ss_pred             ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCC---CCCEeeeeeEEEcCCCceEEEEe
Confidence            467889999999887543   3346899988753322 2355778888888776   99999999985 55678999999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       108 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~  164 (298)
T 3f66_A          108 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK  164 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCC
Confidence            99999999999864 45899999999999999999999       999999999643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.72  E-value=6.3e-17  Score=129.59  Aligned_cols=119  Identities=24%  Similarity=0.380  Sum_probs=102.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||.+.+. .++.||+|.+......  ..+.+.+|+.+++.+.. +|+||+++++++.+....|+||| +.
T Consensus        34 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~~~iv~~~~~~~~~~~~~lv~e-~~  110 (313)
T 3cek_A           34 KQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDKIIRLYDYEITDQYIYMVME-CG  110 (313)
T ss_dssp             EEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG-GCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred             EEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc-cCCceEEEEEEeecCCEEEEEEe-cC
Confidence            46789999999999875 5889999999764332  23567889999988861 25999999999999999999999 55


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +++|.+++.+.+.+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus       111 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~  161 (313)
T 3cek_A          111 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV  161 (313)
T ss_dssp             SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE
Confidence            8899999999888999999999999999999999       9999999984

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.72  E-value=3e-17  Score=132.59  Aligned_cols=121  Identities=21%  Similarity=0.287  Sum_probs=102.5

Q ss_pred             ccccCCCCcceeeccC-CCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhc---CCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLS-PAPSQHVAIKRITKKNLAKTQNFGKEINILKELTEL---HHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~---~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+.+ ..+++.||+|++.... ...+.+.+|+.+++.+...   .|++++++++++.+.+.+|+||||
T Consensus        20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   98 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL   98 (339)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence            5678899999999876 5678899999997532 2235678899988887721   244699999999999999999999


Q ss_pred             cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + +++|.+++...+  .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        99 ~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  153 (339)
T 1z57_A           99 L-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQ  153 (339)
T ss_dssp             C-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC
T ss_pred             C-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEec
Confidence            9 899999998875  5889999999999999999999       99999999965

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.72  E-value=1e-17  Score=133.28  Aligned_cols=87  Identities=23%  Similarity=0.374  Sum_probs=73.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++||||+||++|||++|+.||.+.+.......+..........+..+++.+.+||.+||+.||.+||++.++++
T Consensus       190 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            46789999999999999999999999998887665544444444344456678999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      |+||...
T Consensus       270 h~~~~~~  276 (297)
T 3fxz_A          270 HQFLKIA  276 (297)
T ss_dssp             CGGGGGC
T ss_pred             Chhhccc
Confidence            9999854

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.72  E-value=6.6e-18  Score=146.56  Aligned_cols=121  Identities=28%  Similarity=0.390  Sum_probs=104.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKES------DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~~lv  194 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++..... ...+.+.+|+.+++.++   ||||+++++++..      ....|+|
T Consensus        20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~v~~~~~~~~~~~~~~LV   96 (676)
T 3qa8_A           20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN---HPNVVSAREVPDGLQKLAPNDLPLLA   96 (676)
T ss_dssp             CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCC---BTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCC---CCCCCceeeeecccccccCCCeEEEE
Confidence            567889999999999999999999999875422 22356788999998886   9999999998765      6788999


Q ss_pred             EeccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKG---TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+||+|.+++...+   .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        97 mEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~  157 (676)
T 3qa8_A           97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG  157 (676)
T ss_dssp             EECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECC
T ss_pred             EEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecC
Confidence            99999999999998754   5999999999999999999999       999999999743

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.72  E-value=3.6e-17  Score=131.93  Aligned_cols=120  Identities=15%  Similarity=0.156  Sum_probs=99.2

Q ss_pred             ccccCCCCcceeeccCCCCCCee----EEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHV----AIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~v----avK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||++.+..+++.+    |+|.+..... ...+.+.+|+.+++.++   ||||+++++++.+.. .++|||
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~-~~~v~~   96 (327)
T 3lzb_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD---NPHVCRLLGICLTST-VQLITQ   96 (327)
T ss_dssp             EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCC---BTTBCCCCEEEESSS-EEEEEC
T ss_pred             EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCC---CCCeeEEEEEEecCC-ceEEEE
Confidence            56889999999999987777766    5555543221 22356778888888776   999999999998765 889999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+.+|+|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~  153 (327)
T 3lzb_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  153 (327)
T ss_dssp             CCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC
Confidence            99999999999874 56999999999999999999999       999999999653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.72  E-value=9.2e-17  Score=135.73  Aligned_cols=117  Identities=19%  Similarity=0.143  Sum_probs=102.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.....  ...+.+|+.+++.+.  +|++|+.+..++......||||||+ ++
T Consensus        13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~--~~~~i~~i~~~~~~~~~~~lvme~~-g~   87 (483)
T 3sv0_A           13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQ--GGTGIPNVRWFGVEGDYNVLVMDLL-GP   87 (483)
T ss_dssp             CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTT--TSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhc--CCCCCCeEEEEEeeCCEEEEEEECC-CC
Confidence            467889999999999989999999998875432  256889999999887  3567777878888899999999999 99


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +|.+++.. .+.+++.++..++.|++.||.|||       |+||+||||.
T Consensus        88 sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~  137 (483)
T 3sv0_A           88 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG  137 (483)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             CHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEe
Confidence            99999986 456999999999999999999999       9999999995

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.72  E-value=1.5e-17  Score=132.24  Aligned_cols=79  Identities=18%  Similarity=0.355  Sum_probs=62.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccC--CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVL--VPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      .+|+.++|||||||++|||+||+.||.+.+... +...+......  .+..+..+++++.+||.+||+.||.+|||+.++
T Consensus       212 ~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei  291 (307)
T 3omv_A          212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI  291 (307)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred             CCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            469999999999999999999999998876544 33333333222  224556789999999999999999999999887


Q ss_pred             hc
Q psy4166          80 FA   81 (249)
Q Consensus        80 ~~   81 (249)
                      +.
T Consensus       292 ~~  293 (307)
T 3omv_A          292 LS  293 (307)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.71  E-value=1.2e-17  Score=136.38  Aligned_cols=88  Identities=20%  Similarity=0.388  Sum_probs=73.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+|+.++||||+||++|+|++|.+||.+.+..+....+....... +..+..+++++++||.+||..||.+||++.+++
T Consensus       192 ~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l  271 (361)
T 2yab_A          192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL  271 (361)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            4679999999999999999999999999988877766554433222 122356899999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +||||....
T Consensus       272 ~hp~~~~~~  280 (361)
T 2yab_A          272 RHPWITPVD  280 (361)
T ss_dssp             TSTTTSCSS
T ss_pred             cCcCcCCCc
Confidence            999998654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.71  E-value=2.3e-17  Score=137.49  Aligned_cols=114  Identities=19%  Similarity=0.232  Sum_probs=96.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC------CeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD------QHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~------~~~~lv~  195 (249)
                      ..+|.|.+|.||++.+..+++.||+|++....    ....+|+.+++.++   ||||++++++|...      .++++||
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~---hpniv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLD---HCNIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCC---CTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcC---CCCccceeeEEeccCCCCcceeEEeeh
Confidence            56889999999999999999999999986542    33457999998876   99999999998542      2478999


Q ss_pred             eccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         196 EFCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||+++ +|.+++..    .+.+++..++.++.|++.||.|||       |+||+|||+.
T Consensus       133 e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~  190 (420)
T 1j1b_A          133 DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD  190 (420)
T ss_dssp             ECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE
T ss_pred             hcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe
Confidence            99975 77777653    456999999999999999999999       9999999996

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.71  E-value=4.3e-17  Score=132.06  Aligned_cols=116  Identities=17%  Similarity=0.263  Sum_probs=98.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv~e~  197 (249)
                      ..+|.|.++.||.+..  +++.||+|++....   ...+.+|..++..+. ++||||+++++++....    .+|+||||
T Consensus        48 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~-l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  121 (342)
T 1b6c_B           48 ESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVM-LRHENILGFIAADNKDNGTWTQLWLVSDY  121 (342)
T ss_dssp             EEEEEETTEEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHHHSC-CCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred             eeecCCCCcEEEEEEE--cCccEEEEEeCchh---HHHHHHHHHHHHHhh-cCCCcEEEEEeeecccCCccceeEEEEee
Confidence            4578899999999876  58899999996542   245678888887632 35999999999998876    89999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------------d~kp~nili~~  244 (249)
                      +++|+|.+++.+. .+++..+..++.|++.|+.|||               |+||+|||+..
T Consensus       122 ~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          122 HEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  182 (342)
T ss_dssp             CTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT
T ss_pred             cCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC
Confidence            9999999999875 4999999999999999999999               89999999954

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.71  E-value=3.7e-17  Score=133.01  Aligned_cols=119  Identities=24%  Similarity=0.352  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|.+...... ....+.+|+.+++.++   ||||+++++++...     ...|+||
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~lv~   93 (353)
T 2b9h_A           17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK---HENIITIFNIQRPDSFENFNEVYIIQ   93 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred             eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCc---CCCcCCeeeeecccccCccceEEEEE
Confidence            5678899999999999899999999999643222 1245678888888776   99999999987654     6799999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||++ |+|.+++... .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        94 e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~  148 (353)
T 2b9h_A           94 ELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN  148 (353)
T ss_dssp             CCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             eccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCC
Confidence            9996 6999999875 5999999999999999999999       999999999643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.71  E-value=2.8e-17  Score=132.60  Aligned_cols=90  Identities=21%  Similarity=0.238  Sum_probs=70.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC-C--------------------------CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK-V--------------------------PVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~--------------------------~~~~~   55 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..+....+......++. .                          +..++
T Consensus       213 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (329)
T 3gbz_A          213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD  292 (329)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC
Confidence            45899999999999999999999999988776554433222111110 0                          01167


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      +++.+||.+||+.||.+||++.++++||||....+++
T Consensus       293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~P  329 (329)
T 3gbz_A          293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFDP  329 (329)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCSCC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCCCC
Confidence            8999999999999999999999999999999877653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.71  E-value=1.9e-17  Score=135.73  Aligned_cols=122  Identities=12%  Similarity=0.039  Sum_probs=88.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeee-------EeEEeC---
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELL-------HCKESD---  188 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~-------~~~~~~---  188 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......   .+.+.+|+.+++.+.. +||||++++       +++...   
T Consensus        68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~  146 (371)
T 3q60_A           68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQP  146 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSC
T ss_pred             eeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCC
Confidence            56889999999999998899999999998754322   3456788777777776 799988755       444332   


Q ss_pred             --------------CeEEEEEeccCCCCHHHHHHhcC-CCCHHHH------HHHHHHHHHHHHHhh-------cCCccce
Q psy4166         189 --------------QHVYLVMEFCNGGDLADYLVSKG-TLSEDTI------RIFLKLHQMLQLYFH-------DFTPWSF  240 (249)
Q Consensus       189 --------------~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~------~~~~~~i~~~l~ylh-------d~kp~ni  240 (249)
                                    ..+|+|||||+ |+|.+++...+ .+++...      ..++.|++.|+.|||       |+||+||
T Consensus       147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NI  225 (371)
T 3q60_A          147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNL  225 (371)
T ss_dssp             SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHE
Confidence                          34899999998 89999998743 3444444      566799999999999       9999999


Q ss_pred             eeeec
Q psy4166         241 VILYT  245 (249)
Q Consensus       241 li~~~  245 (249)
                      |+...
T Consensus       226 ll~~~  230 (371)
T 3q60_A          226 FIMPD  230 (371)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            99653

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.71  E-value=4.2e-17  Score=131.47  Aligned_cols=93  Identities=18%  Similarity=0.245  Sum_probs=76.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-cCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL-VLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+.... ......+..+++.+.+||.+||..||.+||++++++
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll  286 (327)
T 3lm5_A          207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL  286 (327)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            4678999999999999999999999999988876655444332 223334456899999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPHPLI   94 (249)
Q Consensus        81 ~~~~~~~~~~~~~~   94 (249)
                      +|+||....+....
T Consensus       287 ~h~~~~~~~~~~~~  300 (327)
T 3lm5_A          287 SHSWLQQWDFENLF  300 (327)
T ss_dssp             TCGGGCCCCTTCC-
T ss_pred             CCHhhccccccccc
Confidence            99999988877654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.71  E-value=1.5e-16  Score=126.12  Aligned_cols=116  Identities=21%  Similarity=0.189  Sum_probs=97.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCee-eeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVV-ELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv-~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.++.||.+.+..+++.||+|.+.....  ...+.+|+.+++.+.   |++++ .+..++......|+||||+ +
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~---~~~~i~~~~~~~~~~~~~~lv~e~~-~   88 (296)
T 4hgt_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ---GGVGIPTIRWCGAEGDYNVMVMELL-G   88 (296)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHT---TSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             eeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhc---CCCCCCeeeeecCCCCceEEEEEcc-C
Confidence            567889999999999989999999998765432  256888999999887   66544 5555557888999999999 9


Q ss_pred             CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         201 GDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       201 g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |+|.+++.. .+.+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus        89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~  139 (296)
T 4hgt_A           89 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG  139 (296)
T ss_dssp             CBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeee
Confidence            999999985 456999999999999999999999       9999999994

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.71  E-value=2.7e-17  Score=133.07  Aligned_cols=89  Identities=22%  Similarity=0.453  Sum_probs=75.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+...+...+...   ....|..+++++.+||.+||..||.+|+     ++
T Consensus       179 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~  255 (337)
T 1o6l_A          179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA  255 (337)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTH
T ss_pred             CCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCH
Confidence            567999999999999999999999999988877766555433   2345667899999999999999999999     89


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      +++++|+||..+.|...
T Consensus       256 ~ei~~h~~f~~~~~~~~  272 (337)
T 1o6l_A          256 KEVMEHRFFLSINWQDV  272 (337)
T ss_dssp             HHHHTSGGGTTCCHHHH
T ss_pred             HHHHcCCCcCCCCHHHH
Confidence            99999999998876543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=1.2e-17  Score=136.99  Aligned_cols=121  Identities=17%  Similarity=0.166  Sum_probs=98.0

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEE-eCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKE-SDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~-~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+....   ....||+|.+..... ...+.+.+|+.+++.++   ||||+++++++. ..+..|+|||
T Consensus        95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~~lv~e  171 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS---HPNVLSLLGICLRSEGSPLVVLP  171 (373)
T ss_dssp             EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCC---CTTBCCCCEEECCCSSCCEEEEE
T ss_pred             cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEEcCCCCeEEEEE
Confidence            468899999999887532   234689999865322 22355777888777665   999999999864 4568899999


Q ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+++|+|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       172 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  228 (373)
T 3c1x_A          172 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK  228 (373)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             CCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC
Confidence            999999999998754 5889999999999999999999       999999999643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.70  E-value=6.4e-18  Score=148.89  Aligned_cols=118  Identities=19%  Similarity=0.226  Sum_probs=95.9

Q ss_pred             ccccCCCCcceeeccCCC-CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe-----EEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQH-----VYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~-----~~lv  194 (249)
                      ..+|.|.+|.||.+.+.. +++.||+|.+...... ....+.+|+.+++.++   ||||+++++++.....     .|||
T Consensus        86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~~~~~~~lv  162 (681)
T 2pzi_A           86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV---HPSIVQIFNFVEHTDRHGDPVGYIV  162 (681)
T ss_dssp             EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCC---CTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred             EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcC---CCCcCeEeeeEeecCCCCCceeEEE
Confidence            457889999999998765 7899999998654222 2245667777777665   9999999999987655     7999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++|++|.+++..  .+++.++..++.|++.||.|||       |+||+|||+..
T Consensus       163 ~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~  217 (681)
T 2pzi_A          163 MEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE  217 (681)
T ss_dssp             EECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS
T ss_pred             EEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC
Confidence            999999999998865  5999999999999999999999       99999999964

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.70  E-value=3e-17  Score=134.06  Aligned_cols=118  Identities=21%  Similarity=0.271  Sum_probs=98.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-----------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe---
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-----------TQNFGKEINILKELTELHHENVVELLHCKES---  187 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~---  187 (249)
                      ..+|.|.+|.||.+.+.. +..||+|++.......           .+.+.+|+.+++.++   ||||+++++++..   
T Consensus        28 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~  103 (362)
T 3pg1_A           28 RFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH---HPNILGLRDIFVHFEE  103 (362)
T ss_dssp             EEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEEEECCT
T ss_pred             EEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC---CcCccceeeeEEeccC
Confidence            467889999999998754 8999999987543221           145778888888876   9999999999854   


Q ss_pred             --CCeEEEEEeccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         188 --DQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       188 --~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                        ...+|+||||++ |+|.+++...+ .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus       104 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~  169 (362)
T 3pg1_A          104 PAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD  169 (362)
T ss_dssp             TTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             CCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC
Confidence              346999999997 68888887653 6999999999999999999999       99999999964

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.70  E-value=9.7e-17  Score=129.39  Aligned_cols=85  Identities=24%  Similarity=0.443  Sum_probs=72.0

Q ss_pred             CCCCC-cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYD-AKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~-~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+ .++||||+||++|||++|+.||.+.+..++...+....   ...|..+++++.+|+.+||..||.+|||+++++
T Consensus       187 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil  263 (328)
T 3fe3_A          187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM  263 (328)
T ss_dssp             TCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHT
T ss_pred             CCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            34554 78999999999999999999999998877766555433   344667899999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +||||....
T Consensus       264 ~h~~~~~~~  272 (328)
T 3fe3_A          264 KDRWINAGH  272 (328)
T ss_dssp             TCTTTTTTC
T ss_pred             cCHhhcCCC
Confidence            999998643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.70  E-value=3.5e-17  Score=130.79  Aligned_cols=114  Identities=24%  Similarity=0.307  Sum_probs=96.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||.+..  .++.||+|.+....  ..+.+.+|+.+++.++   ||||+++++++.+  ..|+||||++||
T Consensus        14 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~--~~~lv~e~~~~~   84 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKW--RAKDVAIKQIESES--ERKAFIVELRQLSRVN---HPNIVKLYGACLN--PVCLVMEYAEGG   84 (307)
T ss_dssp             EEEECCSSSEEEEEEE--TTEEEEEEECSSTT--HHHHHHHHHHHHHHCC---CTTBCCEEEBCTT--TTEEEEECCTTC
T ss_pred             eEeecCCCceEEEEEE--CCeeEEEEEecChh--HHHHHHHHHHHHhcCC---CCCcCeEEEEEcC--CcEEEEEcCCCC
Confidence            4678899999999875  47889999986432  2356788998888876   9999999998874  478999999999


Q ss_pred             CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHhh----------cCCccceeeee
Q psy4166         202 DLADYLVSKG---TLSEDTIRIFLKLHQMLQLYFH----------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~ylh----------d~kp~nili~~  244 (249)
                      +|.+++...+   .+++..+..++.|++.|+.|||          |+||+|||+..
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~  140 (307)
T 2eva_A           85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA  140 (307)
T ss_dssp             BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET
T ss_pred             CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC
Confidence            9999998765   3788999999999999999998          78999999964

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.70  E-value=1.5e-16  Score=126.20  Aligned_cols=116  Identities=21%  Similarity=0.189  Sum_probs=98.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCee-eeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVV-ELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv-~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.||.+.+..+++.||+|++.....  ...+.+|+.+++.+.   |++++ .+..++......|+||||+ +
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~---~~~~i~~~~~~~~~~~~~~lv~e~~-~   88 (296)
T 3uzp_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ---GGVGIPTIRWCGAEGDYNVMVMELL-G   88 (296)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHT---TSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred             EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhh---cCCCCCccccccCCCCceEEEEEec-C
Confidence            467889999999999989999999999875432  256789999999887   66644 5555557788899999999 9


Q ss_pred             CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         201 GDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       201 g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |+|.+++.. .+.+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus        89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~  139 (296)
T 3uzp_A           89 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG  139 (296)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEe
Confidence            999999984 456999999999999999999999       9999999995

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.70  E-value=7.2e-17  Score=133.13  Aligned_cols=87  Identities=26%  Similarity=0.323  Sum_probs=68.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----------------------------------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP----------------------------------   48 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------------   48 (249)
                      ..|+.++||||+||++|||++|++||.+.+.......+......+.                                  
T Consensus       206 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (388)
T 3oz6_A          206 TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIF  285 (388)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCH
T ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhC
Confidence            5799999999999999999999999998877654433322111110                                  


Q ss_pred             ----------CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          49 ----------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        49 ----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                                ..+..+++++.+||.+||..||.+|||++++++||||....
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          286 TKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             HHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             cchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence                      01125789999999999999999999999999999998654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.70  E-value=1.4e-17  Score=131.06  Aligned_cols=116  Identities=25%  Similarity=0.329  Sum_probs=96.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv~e~~~~  200 (249)
                      ..++.|.++.||.+..  .++.||+|.+....  ..+.+.+|+.+++.++   ||||+++++++.. .+.+|+||||+++
T Consensus        27 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~lv~e~~~~   99 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLR---HSNLVQLLGVIVEEKGGLYIVTEYMAK   99 (278)
T ss_dssp             EEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCC---CTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred             eEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCCceEEEEecCCC
Confidence            4678899999998865  48899999987543  2356778888888776   9999999998654 4579999999999


Q ss_pred             CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGT--LSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+.+.  +++..+..++.|++.|+.|||       |+||+||++..
T Consensus       100 ~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~  152 (278)
T 1byg_A          100 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE  152 (278)
T ss_dssp             EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeC
Confidence            999999987643  899999999999999999999       99999999964

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=6.4e-17  Score=130.72  Aligned_cols=117  Identities=17%  Similarity=0.246  Sum_probs=96.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC----CeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESD----QHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~----~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+...  ++.||+|++.....   ....+|..++... .++||||+++++++...    ..+|+||||
T Consensus        43 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~---~~~~~e~~~~~~~-~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  116 (337)
T 3mdy_A           43 KQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE---ASWFRETEIYQTV-LMRHENILGFIAADIKGTGSWTQLYLITDY  116 (337)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEEEGGGH---HHHHHHHHHHTST-TCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred             eEeecCCCeEEEEEEEC--CceEEEEEEecccc---chhhhHHHHHHHH-hhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence            46788999999998764  88999999865422   3345555555443 24699999999999887    789999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------------d~kp~nili~~~  245 (249)
                      +++|+|.+++++. .+++..+..++.|++.|+.|||               |+||+|||+...
T Consensus       117 ~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~  178 (337)
T 3mdy_A          117 HENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN  178 (337)
T ss_dssp             CTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             cCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence            9999999999766 4999999999999999999998               789999999643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.70  E-value=1e-16  Score=130.81  Aligned_cols=118  Identities=19%  Similarity=0.148  Sum_probs=85.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe-------EEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQH-------VYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~-------~~lv  194 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++...... .....+++..+..+   +||||+++++++.....       +|+|
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~~~lv  104 (360)
T 3e3p_A           29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVL---HHPNIVQLQSYFYTLGERDRRDIYLNVV  104 (360)
T ss_dssp             ----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHH---CCTTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhc---CCCCcccHHHhhhccccccccceeEEEE
Confidence            4678899999999999999999999998654321 23344455555555   49999999999976433       8999


Q ss_pred             EeccCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLV----SKGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~  244 (249)
                      |||+++ +|.+.+.    ..+.+++..+..++.|++.|+.|||         |+||+|||+..
T Consensus       105 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~  166 (360)
T 3e3p_A          105 MEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE  166 (360)
T ss_dssp             EECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET
T ss_pred             eecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC
Confidence            999976 5555444    4556899999999999999999999         99999999964

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.70  E-value=5.2e-17  Score=134.71  Aligned_cols=92  Identities=22%  Similarity=0.364  Sum_probs=73.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCCCCHHHHHHHHHhhhhCcccCC---CHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN--LVLVPKVPVGTSAELKELLLGLLKRNAMDRI---SFE   77 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---~~~   77 (249)
                      ..|+.++|||||||++|||++|++||.+.+..+....+...  ....+..+..+++++++||.+||. +|.+|+   +++
T Consensus       245 ~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~  323 (412)
T 2vd5_A          245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAG  323 (412)
T ss_dssp             SEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHH
T ss_pred             CCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHH
Confidence            46899999999999999999999999998887765544321  122233345789999999999999 999984   899


Q ss_pred             HHhcCCCCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHPLIP   95 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~~~   95 (249)
                      ++++||||..+.|..+..
T Consensus       324 ei~~Hpff~~i~w~~l~~  341 (412)
T 2vd5_A          324 DFRTHPFFFGLDWDGLRD  341 (412)
T ss_dssp             HHHTSGGGTTCCSTTSTT
T ss_pred             HHhcCCCcCCCCHHHHhh
Confidence            999999999999987643

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.70  E-value=2.2e-17  Score=133.92  Aligned_cols=79  Identities=18%  Similarity=0.377  Sum_probs=65.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCH-HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSP-PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++|||||||++|||+| |+.||.+.+. ..+...+....  .+..|..+++++.++|.+||+.||.+|||+.++
T Consensus       261 ~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~--~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ei  338 (353)
T 4ase_A          261 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL  338 (353)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence            4689999999999999999998 9999988654 44444454433  345577899999999999999999999999999


Q ss_pred             hcC
Q psy4166          80 FAH   82 (249)
Q Consensus        80 ~~~   82 (249)
                      ++|
T Consensus       339 l~~  341 (353)
T 4ase_A          339 VEH  341 (353)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.70  E-value=1.5e-17  Score=135.02  Aligned_cols=88  Identities=24%  Similarity=0.448  Sum_probs=76.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHH-HHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFE-QLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~i~   80 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+....   +..|..+++++.+||.+||..||.+|+++. +++
T Consensus       192 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          192 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN---PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC---CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            5679999999999999999999999999988877766554433   345667899999999999999999999998 999


Q ss_pred             cCCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPHP   92 (249)
Q Consensus        81 ~~~~~~~~~~~~   92 (249)
                      +||||..+.|..
T Consensus       269 ~hp~f~~~~w~~  280 (345)
T 1xjd_A          269 QHPLFREINWEE  280 (345)
T ss_dssp             GSGGGTTCCHHH
T ss_pred             cCccccCCCHHH
Confidence            999999887654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.70  E-value=3.4e-17  Score=131.13  Aligned_cols=88  Identities=26%  Similarity=0.361  Sum_probs=68.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCCC--------------------------CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-LVLVPK--------------------------VPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~--------------------------~~~~~~   55 (249)
                      ..|+.++||||+||++|||++|+.||.+.+..+....+... ....+.                          ....++
T Consensus       195 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (311)
T 3niz_A          195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFC  274 (311)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCC
T ss_pred             CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccC
Confidence            46899999999999999999999999887665443332221 111110                          112467


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      +++.+||.+||..||.+|||+.++++||||.++.+
T Consensus       275 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          275 QEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence            89999999999999999999999999999997654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.70  E-value=3e-17  Score=134.63  Aligned_cols=118  Identities=24%  Similarity=0.346  Sum_probs=100.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeE------EE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHV------YL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~------~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++......      |+
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~~l  124 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ---HENVIGLLDVFTPASSLRNFYDFYL  124 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEECSCSSSTTCCCCEE
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcC---CCCchhhhhheeccCCcccceeEEE
Confidence            45789999999999999999999999997643222  255778888888776   99999999999877654      99


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||++ |+|.+++..  .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       125 v~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  180 (371)
T 4exu_A          125 VMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  180 (371)
T ss_dssp             EEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             EEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC
Confidence            999996 699888743  4999999999999999999999       999999999654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.70  E-value=2.1e-17  Score=134.58  Aligned_cols=89  Identities=21%  Similarity=0.364  Sum_probs=76.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +.+|+.++|||||||++|||++|++||.+.+..++...+....   ...|..+++++.+||.+||..||.+|++     +
T Consensus       195 ~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~  271 (353)
T 2i0e_A          195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGE  271 (353)
T ss_dssp             TCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHH
T ss_pred             CCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCH
Confidence            5679999999999999999999999999988877766554432   3456679999999999999999999994     6


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      ++++.||||..+.|...
T Consensus       272 ~~i~~h~~f~~~~w~~l  288 (353)
T 2i0e_A          272 RDIKEHAFFRYIDWEKL  288 (353)
T ss_dssp             HHHHTSGGGTTCCHHHH
T ss_pred             HHHhcCccccCCCHHHH
Confidence            99999999998877643

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.70  E-value=5.1e-17  Score=129.81  Aligned_cols=87  Identities=26%  Similarity=0.296  Sum_probs=67.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC------------------------CCCCCCHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK------------------------VPVGTSAE   57 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~   57 (249)
                      +..|+.++||||+||++|||++|++||.+.+.......+......++.                        ....++++
T Consensus       193 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (308)
T 3g33_A          193 QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEES  272 (308)
T ss_dssp             TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHH
Confidence            467899999999999999999999999998887655444322111110                        01247899


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                      +.+||.+||+.||.+|||+.++++||||...
T Consensus       273 ~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          273 GAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            9999999999999999999999999999864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.69  E-value=9.4e-17  Score=127.09  Aligned_cols=119  Identities=18%  Similarity=0.208  Sum_probs=91.4

Q ss_pred             ccccCCCCcceeeccCCC-CC--CeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-PS--QHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-~~--~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..++.|.++.||.+.... ++  ..||+|++......   ..+.+.+|+.+++.++   ||||+++++++.+.. .++||
T Consensus        24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~-~~~v~   99 (291)
T 1u46_A           24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD---HRNLIRLYGVVLTPP-MKMVT   99 (291)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC---CTTBCCEEEEECSSS-CEEEE
T ss_pred             eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC---CCCcccEEEEEccCC-ceeeE
Confidence            467889999999986432 33  36899998764322   2356778888888776   999999999998765 89999


Q ss_pred             eccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~  156 (291)
T 1u46_A          100 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT  156 (291)
T ss_dssp             ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE
T ss_pred             ecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC
Confidence            999999999999874 56999999999999999999999       99999999964

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.69  E-value=5e-17  Score=128.51  Aligned_cols=85  Identities=21%  Similarity=0.272  Sum_probs=70.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++||||+||++|||++|+.||.+.+..+..................+++++.+||.+||..||.+||++.++++|
T Consensus       200 ~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          200 RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            46888999999999999999999999998887776555444433333334578999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          83 PFLQP   87 (249)
Q Consensus        83 ~~~~~   87 (249)
                      |||++
T Consensus       280 p~f~~  284 (285)
T 3is5_A          280 EWFKQ  284 (285)
T ss_dssp             GGGGC
T ss_pred             HHhhc
Confidence            99974

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.69  E-value=1.1e-16  Score=140.08  Aligned_cols=120  Identities=17%  Similarity=0.305  Sum_probs=99.7

Q ss_pred             ccccCCCCcceeeccCCC---CCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPA---PSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+....   .+..||+|.+...... ..+.+.+|+.+++.+.   ||||+++++++. .+..|+||||
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~-~~~~~lv~E~  471 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD---HPHIVKLIGVIT-ENPVWIIMEL  471 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEe-cCceEEEEEc
Confidence            357899999999987643   3567999988653322 2356788888888776   999999999985 4568999999


Q ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +++|+|.+++..++ .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       472 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~  527 (656)
T 2j0j_A          472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN  527 (656)
T ss_dssp             CTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC
Confidence            99999999998754 5899999999999999999999       999999999743

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.69  E-value=5.6e-17  Score=128.46  Aligned_cols=117  Identities=15%  Similarity=0.206  Sum_probs=95.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.++.||.+...   ..+|+|.+.......  .+.+.+|+.+++.++   ||||++++++. .....++||||++
T Consensus        30 ~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~-~~~~~~lv~e~~~  102 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR---HVNILLFMGYS-TAPQLAIVTQWCE  102 (289)
T ss_dssp             EEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEE-CSSSCEEEEECCC
T ss_pred             eEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCC---CCcEEEEEeec-cCCccEEEEEecC
Confidence            56788999999998653   359999987543322  255778888887776   99999999954 5567899999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |++|.+++... +.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~  156 (289)
T 3og7_A          103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED  156 (289)
T ss_dssp             EEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence            99999999654 46999999999999999999999       999999999643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.69  E-value=9.8e-17  Score=132.59  Aligned_cols=90  Identities=21%  Similarity=0.310  Sum_probs=70.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-----------------CC---------CCCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-----------------VP---------KVPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-----------------~~---------~~~~~~~~   56 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+.+....                 .+         ..+..+++
T Consensus       217 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (394)
T 4e7w_A          217 TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPP  296 (394)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCH
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCH
Confidence            35899999999999999999999999998775543322221100                 00         01234789


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      ++.+||.+||++||.+||++.+++.||||....+..
T Consensus       297 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          297 DAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             HHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence            999999999999999999999999999999876544

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.69  E-value=2.3e-17  Score=135.67  Aligned_cols=92  Identities=23%  Similarity=0.360  Sum_probs=73.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-HHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-FEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~i~   80 (249)
                      +.+|+.++|||||||++|||++|+.||.+.+..................|..+++++.+||.+||..||.+|++ +++++
T Consensus       191 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             SCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             CCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            35699999999999999999999999986544333222222223334556778999999999999999999998 99999


Q ss_pred             cCCCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPHPL   93 (249)
Q Consensus        81 ~~~~~~~~~~~~~   93 (249)
                      .||||..+.|...
T Consensus       271 ~hp~f~~~~w~~~  283 (384)
T 4fr4_A          271 NFPYMNDINWDAV  283 (384)
T ss_dssp             TSGGGTTCCHHHH
T ss_pred             cChhhhcCCHHHH
Confidence            9999999887643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.69  E-value=1.5e-16  Score=129.35  Aligned_cols=88  Identities=23%  Similarity=0.421  Sum_probs=75.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +.+|+.++|||||||++|||++|++||.+.+..++...+....   ...|..+++++.++|.+||+.||.+|++     +
T Consensus       212 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~  288 (350)
T 1rdq_E          212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGV  288 (350)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTT
T ss_pred             CCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCH
Confidence            5678999999999999999999999999988877665554432   3446678999999999999999999998     9


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++|+||....|..
T Consensus       289 ~ei~~h~~f~~~~w~~  304 (350)
T 1rdq_E          289 NDIKNHKWFATTDWIA  304 (350)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHHhCcCcCCCCHHH
Confidence            9999999999887653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.69  E-value=1.9e-17  Score=132.90  Aligned_cols=116  Identities=18%  Similarity=0.196  Sum_probs=99.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc--chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA--KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.++.||.+...   ..+|+|.+......  ..+.+.+|+.+++.++   ||||+++++++.+...+|+||||++
T Consensus        39 ~~lg~G~~g~V~~~~~~---~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~iv~e~~~  112 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQTR---HENVVLFMGACMSPPHLAIITSLCK  112 (319)
T ss_dssp             CBCCCSSSSEEEEEEES---SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCC---CTTBCCCCEEEECSSCEEEECBCCC
T ss_pred             eEeccCCceEEEEEEEc---CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCC---CCCEeEEEEEEecCCceEEEeeccc
Confidence            56788999999998754   35999998754322  2255678888887766   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         200 GGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       200 ~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      |++|.+++...+ .+++..+..++.|++.|+.|||       |+||+||++.
T Consensus       113 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~  164 (319)
T 2y4i_B          113 GRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD  164 (319)
T ss_dssp             SEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe
Confidence            999999998765 6999999999999999999999       9999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.69  E-value=5.1e-17  Score=130.50  Aligned_cols=89  Identities=21%  Similarity=0.405  Sum_probs=75.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+.......+....   ...|..+++++.++|.+||..||.+|+     ++
T Consensus       177 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~  253 (318)
T 1fot_A          177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE---LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGT  253 (318)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTT
T ss_pred             CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCH
Confidence            5678999999999999999999999999888776655444332   344667899999999999999999999     89


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      +++++||||..+.|...
T Consensus       254 ~~i~~hp~f~~~~~~~~  270 (318)
T 1fot_A          254 EDVKNHPWFKEVVWEKL  270 (318)
T ss_dssp             HHHHTSGGGSSCCHHHH
T ss_pred             HHHhcCccccCCCHHHH
Confidence            99999999998876543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.69  E-value=4.5e-17  Score=136.06  Aligned_cols=115  Identities=22%  Similarity=0.335  Sum_probs=95.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.|+. ....+++.||+|++.....   ..+.+|+.+++.+.  +|||||++++++.+....|+|||||. |
T Consensus        30 ~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~--~HpnIv~l~~~~~~~~~~~lv~E~~~-g  102 (432)
T 3p23_A           30 DVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF---SFADREVQLLRESD--EHPNVIRYFCTEKDRQFQYIAIELCA-A  102 (432)
T ss_dssp             EEEEECGGGCEEE-EEESSSSEEEEEEECTTTE---EECHHHHHHHHHSC--CCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred             CeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhcc--CCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence            4578888888653 3346789999999965432   34678999998873  49999999999999999999999996 6


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      +|.+++.... .+++..+..++.|++.|+.|||       |+||+|||+.
T Consensus       103 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~  152 (432)
T 3p23_A          103 TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS  152 (432)
T ss_dssp             EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEEC
T ss_pred             CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEe
Confidence            9999998764 4666678899999999999999       9999999995

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.69  E-value=3.7e-17  Score=133.09  Aligned_cols=87  Identities=21%  Similarity=0.403  Sum_probs=74.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF------   76 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~------   76 (249)
                      ..|+.++||||+||++|||++|++||.+.+..++...+....   ...|..+++++.+||.+||..||.+|+++      
T Consensus       199 ~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~  275 (353)
T 3txo_A          199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE---VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGE  275 (353)
T ss_dssp             HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCT
T ss_pred             CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCH
Confidence            358899999999999999999999999998887766555433   33456689999999999999999999998      


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++||||..+.|..
T Consensus       276 ~~il~hp~f~~~~w~~  291 (353)
T 3txo_A          276 HAILRHPFFKEIDWAQ  291 (353)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHhhCCcccCCCHHH
Confidence            8999999999887654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.69  E-value=5.9e-17  Score=135.30  Aligned_cols=92  Identities=21%  Similarity=0.330  Sum_probs=75.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCCCCHHHHHHHHHhhhhCccc--CCCHHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN--LVLVPKVPVGTSAELKELLLGLLKRNAMD--RISFEQ   78 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~   78 (249)
                      ..|+.++|||||||++|||++|++||.+.+..+....+...  ....|.....+++++++||++||..+|++  |+++++
T Consensus       256 ~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~e  335 (437)
T 4aw2_A          256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIED  335 (437)
T ss_dssp             CEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHH
T ss_pred             CCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHH
Confidence            46899999999999999999999999998887765544321  12233334568999999999999988888  999999


Q ss_pred             HhcCCCCCCCCCCCCC
Q psy4166          79 LFAHPFLQPLAPHPLI   94 (249)
Q Consensus        79 i~~~~~~~~~~~~~~~   94 (249)
                      +++||||..+.|..+.
T Consensus       336 il~Hpff~~i~w~~l~  351 (437)
T 4aw2_A          336 FKKHPFFSGIDWDNIR  351 (437)
T ss_dssp             HHTSGGGTTCCTTTGG
T ss_pred             HhCCCccCCCCHHHHh
Confidence            9999999999988763

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.69  E-value=1e-16  Score=134.12  Aligned_cols=116  Identities=22%  Similarity=0.296  Sum_probs=92.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.|+.. ...+++.||+|++....   .+.+.+|+.+++.+.  +||||+++++++.+...+|+|||||+ |
T Consensus        21 ~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~--~HpnIv~~~~~~~~~~~~~lv~E~~~-g   93 (434)
T 2rio_A           21 KILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF---CDIALMEIKLLTESD--DHPNVIRYYCSETTDRFLYIALELCN-L   93 (434)
T ss_dssp             EEEEECSTTCEEEE-EESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHT--TSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             CeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH---HHHHHHHHHHHHhcc--CCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence            45788889988754 44579999999986542   245678999888663  49999999999999999999999995 6


Q ss_pred             CHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKGTL-------SEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~~~-------~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+..       ++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~  150 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST  150 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEC
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence            999999876533       23345779999999999999       99999999964

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.69  E-value=8.1e-17  Score=129.67  Aligned_cols=89  Identities=24%  Similarity=0.385  Sum_probs=70.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---------------------------CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK---------------------------VPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~   55 (249)
                      ..|+.++||||+||++|||++|+.||.+.+..+....+......++.                           ....++
T Consensus       176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (324)
T 3mtl_A          176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLD  255 (324)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSC
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCC
Confidence            56899999999999999999999999998877655444332211110                           012468


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                      +++.+||.+||+.||.+||+++++++||||......
T Consensus       256 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          256 SDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             HHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence            899999999999999999999999999999876543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.69  E-value=1.8e-16  Score=130.53  Aligned_cols=119  Identities=20%  Similarity=0.237  Sum_probs=101.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCC-----CeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHE-----NVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~-----niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||++.+..+++.||+|++..... ....+.+|+.+++.+..  |+     +|+++++++.....+|+|||
T Consensus        60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~--~~~~~~~~iv~~~~~~~~~~~~~lv~e  136 (382)
T 2vx3_A           60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNK--HDTEMKYYIVHLKRHFMFRNHLCLVFE  136 (382)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSSHH-HHHHHHHHHHHHHHHHH--CSSGGGGGBCCEEEEEEETTEEEEEEE
T ss_pred             EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH-HHHHHHHHHHHHHHHHh--cccccceeEEEeeeeeccCCceEEEEe
Confidence            467889999999999999999999999975321 22456778888887762  44     59999999999999999999


Q ss_pred             ccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~  244 (249)
                      |++ |+|.+++...  +.+++..++.++.|++.|+.|||         |+||+|||+..
T Consensus       137 ~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~  194 (382)
T 2vx3_A          137 MLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN  194 (382)
T ss_dssp             CCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS
T ss_pred             cCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec
Confidence            996 5999999876  35999999999999999999998         89999999964

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.68  E-value=1.4e-17  Score=132.30  Aligned_cols=86  Identities=17%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++|||||||++|||++   ||.+.... ............|..+...++.+.+||.+||+.||.+||++.++++
T Consensus       204 ~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          204 GNSYSHKVDIFSLGLILFELLY---PFSTQMER-VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-HHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-HHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            5789999999999999999996   78653322 1111111112222222345677899999999999999999999999


Q ss_pred             CCCCCCCCCC
Q psy4166          82 HPFLQPLAPH   91 (249)
Q Consensus        82 ~~~~~~~~~~   91 (249)
                      |+||.+..+.
T Consensus       280 h~~~~~~~~p  289 (299)
T 4g31_A          280 NAVFEDLDFP  289 (299)
T ss_dssp             SGGGCCC---
T ss_pred             CHhhCCCCCC
Confidence            9999987653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.68  E-value=1.4e-16  Score=128.34  Aligned_cols=120  Identities=10%  Similarity=0.157  Sum_probs=97.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++....... ...+.+|...  .+..++||||+++++++.+.+..|+||||+++
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~--~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~  105 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV--VMRSSDCPYIVQFYGALFREGDCWICMELMST  105 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHH--HHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred             heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHH--HHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence            46788999999999998899999999997643221 2334444442  22334699999999999999999999999975


Q ss_pred             CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         201 GDLADYLVS-----KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                       +|.+++..     .+.+++..+..++.|++.|+.|||        |+||+||++..
T Consensus       106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~  161 (327)
T 3aln_A          106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR  161 (327)
T ss_dssp             -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET
T ss_pred             -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC
Confidence             88888874     456999999999999999999998        99999999954

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.68  E-value=1.1e-16  Score=127.32  Aligned_cols=89  Identities=26%  Similarity=0.348  Sum_probs=73.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|+|++|..||...+.......+..........+..++.++.++|.+||..||.+||++.++++
T Consensus       196 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             STTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             CCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            45688899999999999999999999998887665544444433333345568899999999999999999999999999


Q ss_pred             CCCCCCCCC
Q psy4166          82 HPFLQPLAP   90 (249)
Q Consensus        82 ~~~~~~~~~   90 (249)
                      ||||.....
T Consensus       276 h~~~~~~~~  284 (302)
T 2j7t_A          276 HPFVSSITS  284 (302)
T ss_dssp             STTTTTCCC
T ss_pred             ChHHhhhcc
Confidence            999997653

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.68  E-value=7.6e-17  Score=134.64  Aligned_cols=88  Identities=18%  Similarity=0.240  Sum_probs=66.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC--------------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK--------------------------------   49 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------------   49 (249)
                      +..|+.++|||||||++|||++|++||.+.+..+....+......++.                                
T Consensus       273 ~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (429)
T 3kvw_A          273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSV  352 (429)
T ss_dssp             TBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--C
T ss_pred             CCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccc
Confidence            457999999999999999999999999998876554333221111000                                


Q ss_pred             ------------------------CCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          50 ------------------------VPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        50 ------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                                              .+...++.+.+||.+||++||.+|||+.++++||||....
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          353 VLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             EECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             cccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence                                    0112478899999999999999999999999999998643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.68  E-value=7.3e-17  Score=130.05  Aligned_cols=88  Identities=22%  Similarity=0.388  Sum_probs=71.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|+|++|..||.+.+..+....+....... ...+..++..+.+||.+||..||.+||++.+++
T Consensus       191 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l  270 (326)
T 2y0a_A          191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL  270 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            4678999999999999999999999999888776655444332221 122346789999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +||||....
T Consensus       271 ~hp~~~~~~  279 (326)
T 2y0a_A          271 QHPWIKPKD  279 (326)
T ss_dssp             HSTTTSCCS
T ss_pred             cCCCccCCc
Confidence            999998543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.68  E-value=7.2e-17  Score=129.82  Aligned_cols=87  Identities=25%  Similarity=0.458  Sum_probs=72.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+..........+..+++++.+||.+||..||.+||++.++++
T Consensus       215 ~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            45688999999999999999999999998887766555544433333334467899999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       295 hp~~~~~  301 (321)
T 2c30_A          295 HPFLLQT  301 (321)
T ss_dssp             SGGGGGC
T ss_pred             ChhhccC
Confidence            9999754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.68  E-value=1.1e-16  Score=131.03  Aligned_cols=121  Identities=18%  Similarity=0.226  Sum_probs=103.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhh--------cCCCCeeeeeEeEEeCC----
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTE--------LHHENVVELLHCKESDQ----  189 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~--------~~h~niv~l~~~~~~~~----  189 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++..... ....+.+|+.+++.+..        +.|+||+++++++....    
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  103 (373)
T 1q8y_A           25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV  103 (373)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EeeeecCCeEEEEEEecCCCcEEEEEEecCCcc-chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence            567889999999999989999999999975432 23567788988887763        23899999999998654    


Q ss_pred             eEEEEEeccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         190 HVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       190 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      .+++||||+ +++|.+++...  +.+++..+..++.|++.|+.|||        |+||+|||+..
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~  167 (373)
T 1q8y_A          104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  167 (373)
T ss_dssp             EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence            899999999 89999999874  45999999999999999999999        89999999953

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.68  E-value=1.8e-16  Score=131.38  Aligned_cols=89  Identities=24%  Similarity=0.275  Sum_probs=73.0

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-cCCCCCCCCCCHHHHHHHHHhhhhCccc--CCCHHHHhc
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL-VLVPKVPVGTSAELKELLLGLLKRNAMD--RISFEQLFA   81 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~--R~~~~~i~~   81 (249)
                      |+.++|||||||++|||++|++||.+.+.......+.... ....+.+..+++++++||.+||..+|.+  |++++++++
T Consensus       250 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             EETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             CCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            8889999999999999999999999988877655543321 1222223468999999999999999988  999999999


Q ss_pred             CCCCCCCCCCCC
Q psy4166          82 HPFLQPLAPHPL   93 (249)
Q Consensus        82 ~~~~~~~~~~~~   93 (249)
                      ||||+...|...
T Consensus       330 Hp~f~~~~w~~~  341 (410)
T 3v8s_A          330 HLFFKNDQWAWE  341 (410)
T ss_dssp             SGGGCCSSCCST
T ss_pred             CccccCCCHHHH
Confidence            999999887643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.68  E-value=8.7e-17  Score=129.08  Aligned_cols=89  Identities=25%  Similarity=0.363  Sum_probs=69.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-------------------------------CCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-------------------------------PKVP   51 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------------------~~~~   51 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..+....+......+                               +..+
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T 2pmi_A          184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTK  263 (317)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCS
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhccccc
Confidence            468999999999999999999999999888766544432211110                               0012


Q ss_pred             CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          52 VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        52 ~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                      ..++.++.+||.+||+.||.+||++.++++||||.+....
T Consensus       264 ~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          264 EPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             SCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred             ccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence            2578899999999999999999999999999999875543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.68  E-value=1.3e-16  Score=133.57  Aligned_cols=86  Identities=23%  Similarity=0.351  Sum_probs=72.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+|+.++||||+||++|+|++|.+||.+.+...+...+....... ......+++++.+||.+||..||.+||++.+++
T Consensus       187 ~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L  266 (444)
T 3soa_A          187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL  266 (444)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence            4579999999999999999999999999988877766655543332 233356899999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||..
T Consensus       267 ~hp~~~~  273 (444)
T 3soa_A          267 KHPWISH  273 (444)
T ss_dssp             HSCTTHH
T ss_pred             cCccccC
Confidence            9999964

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.68  E-value=4.4e-17  Score=134.42  Aligned_cols=88  Identities=19%  Similarity=0.386  Sum_probs=70.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---------HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCccc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP---------PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMD   72 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~   72 (249)
                      +.+|+.++||||+||++|||++|++||.+...         ..+...+.   ......|..+++++.+||.+||+.||.+
T Consensus       227 ~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~---~~~~~~p~~~s~~~~~li~~lL~~dP~~  303 (396)
T 4dc2_A          227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL---EKQIRIPRSLSVKAASVLKSFLNKDPKE  303 (396)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHH---HCCCCCCTTSCHHHHHHHHHHTCSCTTT
T ss_pred             CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHh---ccccCCCCcCCHHHHHHHHHHhcCCHhH
Confidence            56899999999999999999999999964321         22222222   2334556779999999999999999999


Q ss_pred             CCCH------HHHhcCCCCCCCCCCC
Q psy4166          73 RISF------EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        73 R~~~------~~i~~~~~~~~~~~~~   92 (249)
                      |+++      +++++||||..+.|..
T Consensus       304 R~~~~~~~~~~ei~~Hpff~~i~w~~  329 (396)
T 4dc2_A          304 RLGCHPQTGFADIQGHPFFRNVDWDM  329 (396)
T ss_dssp             STTCSTTTHHHHHHHSTTTTTCCHHH
T ss_pred             cCCCCCCCCHHHHhcCccccCCCHHH
Confidence            9984      7999999999887764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.68  E-value=4.9e-17  Score=132.44  Aligned_cols=118  Identities=24%  Similarity=0.340  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCe------EEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQH------VYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~------~~l  193 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.......  .+.+.+|+.+++.++   ||||+++++++.....      +|+
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~~~~~~~l  106 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ---HENVIGLLDVFTPASSLRNFYDFYL  106 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcC---CCCcccHhheEecccccccceeEEE
Confidence            46788999999999999999999999997643222  245678888888776   9999999999987654      599


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||++ |+|.+++..  .+++..+..++.|++.|+.|||       |+||+||++...
T Consensus       107 v~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~  162 (353)
T 3coi_A          107 VMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED  162 (353)
T ss_dssp             EEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT
T ss_pred             Eecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCC
Confidence            999997 699888753  4999999999999999999999       999999999643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.68  E-value=1.1e-16  Score=126.63  Aligned_cols=85  Identities=24%  Similarity=0.294  Sum_probs=66.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-C-------------------------CCCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-P-------------------------KVPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~-------------------------~~~~~~~~   56 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+....... .                         .....+++
T Consensus       176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (288)
T 1ob3_A          176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE  255 (288)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCH
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCH
Confidence            458999999999999999999999999887765443332211000 0                         01234789


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      ++.+||.+||..||.+||++.++++||||.+
T Consensus       256 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          256 SGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            9999999999999999999999999999975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.68  E-value=3.6e-16  Score=125.25  Aligned_cols=119  Identities=12%  Similarity=0.132  Sum_probs=90.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHH-HHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFG-KEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~-~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..++.|.++.+|.+.+..+++.||+|++....... ..... .+..+++.+   +||||+++++++.+...+|+||||+ 
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~i~~~~~~~~~~~~~~lv~e~~-  106 (318)
T 2dyl_A           31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH---DCPYIVQCFGTFITNTDVFIAMELM-  106 (318)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred             ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc---CCCceeeEEEEEecCCcEEEEEecc-
Confidence            46788999999999998899999999997653322 12222 333344444   5999999999999999999999999 


Q ss_pred             CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeee
Q psy4166         200 GGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILY  244 (249)
Q Consensus       200 ~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~  244 (249)
                      ++.+..+... .+.+++..+..++.|++.|+.|||        |+||+||++..
T Consensus       107 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~  160 (318)
T 2dyl_A          107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE  160 (318)
T ss_dssp             SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC
Confidence            5666666654 457999999999999999999999        89999999954

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.68  E-value=2.2e-16  Score=128.35  Aligned_cols=121  Identities=17%  Similarity=0.185  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCCCCC-CeeEEEEeecccccchhcHHHHHHHHHHhhhc---CCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS-QHVAIKRITKKNLAKTQNFGKEINILKELTEL---HHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~---~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+.+..++ ..||+|++.... ...+.+.+|+.+++.+...   ++.+++.+++++...+..|+||||
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  103 (355)
T 2eu9_A           25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL  103 (355)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred             EEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence            46788999999999887766 689999997532 2235677899999888722   123399999999999999999999


Q ss_pred             cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      + +|+|.+++...+  .+++.+++.++.|++.||.|||       |+||+|||+..
T Consensus       104 ~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~  158 (355)
T 2eu9_A          104 L-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVN  158 (355)
T ss_dssp             C-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESC
T ss_pred             c-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec
Confidence            9 678888887653  6999999999999999999999       99999999943

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.67  E-value=2.3e-16  Score=129.97  Aligned_cols=88  Identities=18%  Similarity=0.314  Sum_probs=72.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|..||.+.+..+....+..... .....+..+++++.+||.+||..||.+||++.+++
T Consensus       224 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  303 (387)
T 1kob_A          224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL  303 (387)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            46789999999999999999999999999887666555544332 22333456899999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +||||....
T Consensus       304 ~hp~~~~~~  312 (387)
T 1kob_A          304 EHPWLKGDH  312 (387)
T ss_dssp             TSTTTSSCC
T ss_pred             hCccccCCc
Confidence            999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.67  E-value=3.5e-17  Score=134.70  Aligned_cols=88  Identities=26%  Similarity=0.418  Sum_probs=65.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---------------CC---------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK---------------VP---------------   51 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------~~---------------   51 (249)
                      +..|+.++|||||||++|||++|++||.+.+..+....+......++.               .+               
T Consensus       232 ~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (382)
T 2vx3_A          232 GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKRE  311 (382)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccc
Confidence            567999999999999999999999999988876654433322111100               00               


Q ss_pred             ---CC----------------------------CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          52 ---VG----------------------------TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        52 ---~~----------------------------~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                         ..                            .++++.+||.+||+.||.+|||+.++++||||....
T Consensus       312 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          312 YKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             SCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence               00                            013789999999999999999999999999998643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.67  E-value=9.3e-17  Score=132.73  Aligned_cols=113  Identities=20%  Similarity=0.257  Sum_probs=91.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC------eEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ------HVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~------~~~lv~  195 (249)
                      ..+|.|.+|.||.+....++. +|+|++....    ....+|+.+++.++   ||||+++++++....      .+|+||
T Consensus        46 ~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~----~~~~~E~~il~~l~---h~niv~l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK----RFKNRELQIMRIVK---HPNVVDLKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             EEEEEETTEEEEEEEETTTEE-EEEEEEECCT----TSCCHHHHHHHTCC---CTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCe-EEEEEEecCc----chHHHHHHHHHhCC---CCCcceEEEEEEecCCCCCceEEEEEe
Confidence            467889999999998766665 8888886432    23347899988876   999999999996543      389999


Q ss_pred             eccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         196 EFCNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||+++ ++.+.+..    .+.+++..++.++.|++.|+.|||       |+||+|||+.
T Consensus       118 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~  175 (394)
T 4e7w_A          118 EYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD  175 (394)
T ss_dssp             ECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             eccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc
Confidence            99976 44444432    456999999999999999999999       9999999996

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.67  E-value=1.7e-16  Score=132.24  Aligned_cols=89  Identities=24%  Similarity=0.268  Sum_probs=68.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-----------------CCCC---------CCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-----------------LVPK---------VPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-----------------~~~~---------~~~~~~~   56 (249)
                      ..|+.++|||||||++|||++|++||.+.+..+....+.+...                 ..+.         .+...++
T Consensus       232 ~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  311 (420)
T 1j1b_A          232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP  311 (420)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCH
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCH
Confidence            3689999999999999999999999998876543322211100                 0000         1235689


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                      ++.+||.+||.+||.+|+++.++++|+||......
T Consensus       312 ~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          312 EAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP  346 (420)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             HHHHHHHHhccCChhHCCCHHHHhCCHhhcccccc
Confidence            99999999999999999999999999999865443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.67  E-value=1.2e-16  Score=134.07  Aligned_cols=88  Identities=22%  Similarity=0.438  Sum_probs=75.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+...+...+....   ...|..+++++.+||.+||..||.+||     ++
T Consensus       323 ~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~  399 (446)
T 4ejn_A          323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDA  399 (446)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTH
T ss_pred             CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC---CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCH
Confidence            4679999999999999999999999999888877665554432   344667899999999999999999999     99


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++||||....|..
T Consensus       400 ~ell~hp~f~~~~~~~  415 (446)
T 4ejn_A          400 KEIMQHRFFAGIVWQH  415 (446)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHHhCccccCCCHHH
Confidence            9999999999887654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=2.1e-16  Score=129.45  Aligned_cols=88  Identities=25%  Similarity=0.351  Sum_probs=68.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC----------------------------CCCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV----------------------------PKVPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~   54 (249)
                      ..|+.++||||+||++|||++|++||.+.+.......+......+                            .......
T Consensus       201 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (367)
T 1cm8_A          201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA  280 (367)
T ss_dssp             TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTC
T ss_pred             CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence            579999999999999999999999999887654433222111100                            1122457


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++++.+||.+||..||.+|+|++++++||||.....
T Consensus       281 ~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          281 SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             CHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence            899999999999999999999999999999987654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.66  E-value=1.4e-16  Score=130.52  Aligned_cols=89  Identities=19%  Similarity=0.397  Sum_probs=75.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF----E   77 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~----~   77 (249)
                      +.+|+.++|||||||++|||++|.+||.+.+..++...+...   ....+..++.++.+||.+||+.||.+|+++    .
T Consensus       213 ~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~  289 (373)
T 2r5t_A          213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK---PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM  289 (373)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS---CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred             CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc---ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence            567999999999999999999999999988887766555433   234456789999999999999999999985    6


Q ss_pred             HHhcCCCCCCCCCCCC
Q psy4166          78 QLFAHPFLQPLAPHPL   93 (249)
Q Consensus        78 ~i~~~~~~~~~~~~~~   93 (249)
                      +++.|+||..+.|..+
T Consensus       290 ~i~~h~~f~~~~w~~l  305 (373)
T 2r5t_A          290 EIKSHVFFSLINWDDL  305 (373)
T ss_dssp             HHHTSGGGTTCCHHHH
T ss_pred             HHhCCccccCCCHHHH
Confidence            9999999999887654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.66  E-value=2.5e-16  Score=128.09  Aligned_cols=91  Identities=20%  Similarity=0.234  Sum_probs=69.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC------------------------CC-----CCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV------------------------PK-----VPV   52 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------------------~~-----~~~   52 (249)
                      +..|+.++|||||||++|||++|++||.+.+.......+......+                        +.     .+.
T Consensus       197 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (353)
T 2b9h_A          197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP  276 (353)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHST
T ss_pred             CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcc
Confidence            3578899999999999999999999999887654433222111100                        00     113


Q ss_pred             CCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          53 GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        53 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      .+++++.+||.+||..||.+||++.++++||||.......
T Consensus       277 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          277 RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN  316 (353)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred             cCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence            5789999999999999999999999999999999765443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.66  E-value=1.6e-16  Score=129.61  Aligned_cols=88  Identities=20%  Similarity=0.318  Sum_probs=68.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-----------------------------CCCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-----------------------------VPKVPVG   53 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~   53 (249)
                      ..|+.++|||||||++|||++|+.||.+.+.......+......                             .+..+..
T Consensus       207 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (360)
T 3e3p_A          207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLK  286 (360)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCT
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcc
Confidence            34899999999999999999999999988876554433221111                             0111223


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      .++++.+||.+||+.||.+||++.++++||||.....
T Consensus       287 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          287 DAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             THHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             ccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence            5689999999999999999999999999999987644

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.66  E-value=2e-16  Score=127.50  Aligned_cols=88  Identities=27%  Similarity=0.421  Sum_probs=74.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+....   ...|..+++++.+||.+||..||.+||     ++
T Consensus       195 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~  271 (327)
T 3a62_A          195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK---LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDA  271 (327)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC---CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTH
T ss_pred             CCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCH
Confidence            4678999999999999999999999999888776655444332   344567899999999999999999999     78


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      .++++||||....|..
T Consensus       272 ~e~l~hp~f~~~~~~~  287 (327)
T 3a62_A          272 GEVQAHPFFRHINWEE  287 (327)
T ss_dssp             HHHHHSGGGSSCCHHH
T ss_pred             HHHHcCCcccCCCHHH
Confidence            9999999999876643

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.66  E-value=7.2e-17  Score=129.35  Aligned_cols=89  Identities=33%  Similarity=0.509  Sum_probs=64.0

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCH---------------HHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhh
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSP---------------PQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLK   67 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~---------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~   67 (249)
                      .|+.++||||+||++|||++|+.||.+.+.               ..+...+.......+ .....+++++.+||.+||.
T Consensus       202 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  281 (316)
T 2ac3_A          202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV  281 (316)
T ss_dssp             HHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSC
T ss_pred             CCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhh
Confidence            478899999999999999999999987642               222233333222111 1113578999999999999


Q ss_pred             hCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          68 RNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        68 ~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      .||.+||++.++++||||....+..
T Consensus       282 ~dP~~Rps~~e~l~hp~~~~~~~~~  306 (316)
T 2ac3_A          282 RDAKQRLSAAQVLQHPWVQGCAPEN  306 (316)
T ss_dssp             SSTTTSCCHHHHHHSTTCC------
T ss_pred             CChhhCCCHHHHhcChhhcCCCCcc
Confidence            9999999999999999999765443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.66  E-value=2.7e-16  Score=127.92  Aligned_cols=88  Identities=23%  Similarity=0.308  Sum_probs=69.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++|||||||++|||++|+.||.+..... ....+..... .....+..++.++.+||.+||..||.+||++.++
T Consensus       224 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  303 (349)
T 2w4o_A          224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA  303 (349)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            4578999999999999999999999998765543 3333332222 2223345689999999999999999999999999


Q ss_pred             hcCCCCCCCC
Q psy4166          80 FAHPFLQPLA   89 (249)
Q Consensus        80 ~~~~~~~~~~   89 (249)
                      ++||||....
T Consensus       304 l~hp~~~~~~  313 (349)
T 2w4o_A          304 LQHPWVTGKA  313 (349)
T ss_dssp             HHSTTTTSTT
T ss_pred             hcCcccCCCc
Confidence            9999998543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.66  E-value=2.7e-16  Score=125.36  Aligned_cols=84  Identities=25%  Similarity=0.396  Sum_probs=70.6

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPF   84 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~   84 (249)
                      ++.++|||||||++|||++|+.||.+.+.......+....   ...+..+++++.+||.+||..||.+||++.++++|+|
T Consensus       190 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~  266 (305)
T 2wtk_C          190 SGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS---YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW  266 (305)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC---CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCC---CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            3678999999999999999999999888776655554432   3446678999999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          85 LQPLAPH   91 (249)
Q Consensus        85 ~~~~~~~   91 (249)
                      |......
T Consensus       267 ~~~~~~~  273 (305)
T 2wtk_C          267 FRKKHPP  273 (305)
T ss_dssp             HHSCCCC
T ss_pred             cccCCCC
Confidence            9865443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.66  E-value=1.3e-16  Score=129.01  Aligned_cols=117  Identities=21%  Similarity=0.232  Sum_probs=92.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-----CCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES-----DQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-----~~~~~lv~e  196 (249)
                      ..+|.|.+|.||.+..  +++.||+|++.....   ..+..|..+.. +..++|+||+++++.+..     ...+|+|||
T Consensus        19 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~-~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e   92 (336)
T 3g2f_A           19 ELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYR-VPLMEHDNIARFIVGDERVTADGRMEYLLVME   92 (336)
T ss_dssp             EEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHT-STTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred             eecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHH-HHhccCcchhhheecccccccCCCceEEEEEe
Confidence            5678899999999854  688999999975432   33344444432 333569999999985543     346899999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh----------------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH----------------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh----------------d~kp~nili~~~  245 (249)
                      ||++|+|.+++...+ .++..+..++.|++.|+.|||                |+||+|||+...
T Consensus        93 ~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~  156 (336)
T 3g2f_A           93 YYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND  156 (336)
T ss_dssp             CCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred             cCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence            999999999998765 689999999999999999998                569999999753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.66  E-value=1.8e-16  Score=128.76  Aligned_cols=88  Identities=19%  Similarity=0.399  Sum_probs=70.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCC---------CHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCccc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIAN---------SPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMD   72 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~   72 (249)
                      +..|+.++||||+||++|||++|++||...         ....+...+..   .....|..++.++.+||.+||..||.+
T Consensus       184 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~lL~~dP~~  260 (345)
T 3a8x_A          184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---KQIRIPRSLSVKAASVLKSFLNKDPKE  260 (345)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH---CCCCCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred             CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc---CCCCCCCCCCHHHHHHHHHHhcCCHhH
Confidence            567899999999999999999999999752         22223333322   233456778999999999999999999


Q ss_pred             CCCH------HHHhcCCCCCCCCCCC
Q psy4166          73 RISF------EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        73 R~~~------~~i~~~~~~~~~~~~~   92 (249)
                      |+++      +++++||||..+.|..
T Consensus       261 R~~~~~~~~~~~i~~hp~f~~~~w~~  286 (345)
T 3a8x_A          261 RLGCHPQTGFADIQGHPFFRNVDWDM  286 (345)
T ss_dssp             STTCCTTTHHHHHHTSGGGTTCCHHH
T ss_pred             CCCCCCcCCHHHHhcCCccCCCCHHH
Confidence            9984      8999999999887653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.66  E-value=9e-17  Score=141.11  Aligned_cols=89  Identities=21%  Similarity=0.378  Sum_probs=77.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF-----   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----   76 (249)
                      +.+|+.++|||||||++|||++|++||.+.+..++...+...   ....|..+++++.+||.+||+.||.+|+++     
T Consensus       516 ~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~  592 (674)
T 3pfq_A          516 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH---NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGE  592 (674)
T ss_dssp             CCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS---CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHH
T ss_pred             CCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC---CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcH
Confidence            578999999999999999999999999998887776655443   334567799999999999999999999986     


Q ss_pred             HHHhcCCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~~   93 (249)
                      +++++|+||..+.|..+
T Consensus       593 ~ei~~h~ff~~i~w~~l  609 (674)
T 3pfq_A          593 RDIKEHAFFRYIDWEKL  609 (674)
T ss_dssp             HHHHSSGGGSSCCHHHH
T ss_pred             HHHhcCccccCCCHHHH
Confidence            99999999999887654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.65  E-value=1.5e-16  Score=126.03  Aligned_cols=84  Identities=24%  Similarity=0.394  Sum_probs=66.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|+|++|+.||.+..... ....+.. ...+...+...++++.+||.+||..||.+||++.++++
T Consensus       204 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc-cCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            358899999999999999999999998754433 3332222 22223345567899999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||.+
T Consensus       283 h~~f~~  288 (290)
T 1t4h_A          283 HAFFQE  288 (290)
T ss_dssp             SGGGC-
T ss_pred             Cccccc
Confidence            999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.65  E-value=3.1e-16  Score=130.07  Aligned_cols=88  Identities=23%  Similarity=0.292  Sum_probs=64.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCH----------HHHHHHHHhcccCCCCCC---------------------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSP----------PQLKQYYEKNLVLVPKVP---------------------   51 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~----------~~~~~~~~~~~~~~~~~~---------------------   51 (249)
                      ..|+.++|||||||++|||++|++||.+...          ..+..+......+....+                     
T Consensus       211 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (405)
T 3rgf_A          211 RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY  290 (405)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGG
T ss_pred             CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCC
Confidence            4589999999999999999999999987654          222222222111111100                     


Q ss_pred             -------------CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          52 -------------VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        52 -------------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                                   ...++++.+||.+||..||.+|||++++++||||.....
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          291 TNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             TTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             CcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence                         112678899999999999999999999999999986543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.65  E-value=4.7e-17  Score=132.48  Aligned_cols=86  Identities=22%  Similarity=0.397  Sum_probs=67.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++||||+||++|||++|+.||.+.................+..+..+++++.+||.+||..||.+||++.++++
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          207 REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            45789999999999999999999999988644333333322222222222468899999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||..
T Consensus       287 hp~~~~  292 (351)
T 3c0i_A          287 HPWLKE  292 (351)
T ss_dssp             SHHHHT
T ss_pred             ChhhcC
Confidence            999975

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.65  E-value=1.4e-16  Score=130.18  Aligned_cols=86  Identities=22%  Similarity=0.327  Sum_probs=71.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|+|++|++||.+.+...+...+.......+ ..+..+++++.+||.+||..||.+||++.+++
T Consensus       204 ~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  283 (362)
T 2bdw_A          204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL  283 (362)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            45799999999999999999999999999888776665544433222 22345799999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||..
T Consensus       284 ~hp~~~~  290 (362)
T 2bdw_A          284 KVPWICN  290 (362)
T ss_dssp             TSHHHHT
T ss_pred             cCcccCC
Confidence            9999974

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.65  E-value=4e-16  Score=126.92  Aligned_cols=87  Identities=18%  Similarity=0.210  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCC----------------------------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVG----------------------------   53 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~----------------------------   53 (249)
                      ..|+.++|||||||++|||++|++||.+.+.......+....... +.....                            
T Consensus       204 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (351)
T 3mi9_A          204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV  283 (351)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHH
T ss_pred             CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhcc
Confidence            458999999999999999999999999988876655443322221 111111                            


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      .++.+.+||.+||+.||.+||++.++++||||....
T Consensus       284 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          284 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             CChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence            267899999999999999999999999999998543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.65  E-value=2.4e-16  Score=126.73  Aligned_cols=88  Identities=20%  Similarity=0.388  Sum_probs=71.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|+|++|..||.+.+..+....+....... +..+..+++.+.+||.+||..||.+||++.+++
T Consensus       192 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l  271 (321)
T 2a2a_A          192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL  271 (321)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHH
T ss_pred             CCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            4678999999999999999999999999888776655444332221 112246789999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +||||....
T Consensus       272 ~hp~~~~~~  280 (321)
T 2a2a_A          272 RHPWITPVD  280 (321)
T ss_dssp             HSTTTSCSS
T ss_pred             cCccccCCC
Confidence            999998553

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.65  E-value=3.3e-16  Score=126.07  Aligned_cols=85  Identities=16%  Similarity=0.120  Sum_probs=64.8

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPF   84 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~   84 (249)
                      ++.++||||+||++|||++|+.||.+.+.....................+++++.+||.+||..||.+||++.++++|+|
T Consensus       185 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~  264 (323)
T 3tki_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW  264 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             CCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence            36689999999999999999999987655322211111112222223568899999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          85 LQPLA   89 (249)
Q Consensus        85 ~~~~~   89 (249)
                      |....
T Consensus       265 ~~~~~  269 (323)
T 3tki_A          265 YNKPL  269 (323)
T ss_dssp             TTCCC
T ss_pred             hcccc
Confidence            98643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=7.2e-16  Score=125.19  Aligned_cols=87  Identities=17%  Similarity=0.193  Sum_probs=67.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-ccCCCC-------------------C-----CCCCCHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKN-LVLVPK-------------------V-----PVGTSAE   57 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~-------------------~-----~~~~~~~   57 (249)
                      ..|+.++|||||||++|||++|.+||.+.+..+....+... ......                   .     ...++.+
T Consensus       188 ~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (346)
T 1ua2_A          188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD  267 (346)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHH
T ss_pred             CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHH
Confidence            35889999999999999999999999988876554433221 111100                   0     1345789


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +.+||.+||..||.+||++.++++|+||....
T Consensus       268 ~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          268 LLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence            99999999999999999999999999998654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.65  E-value=6.1e-17  Score=133.59  Aligned_cols=89  Identities=25%  Similarity=0.312  Sum_probs=63.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--------------------------------------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL--------------------------------------   44 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~--------------------------------------   44 (249)
                      ..|+.++||||+||++|||++|+.||.+.+............                                      
T Consensus       212 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (389)
T 3gni_B          212 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR  291 (389)
T ss_dssp             SCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------------------------------------
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccc
Confidence            579999999999999999999999998765433221110000                                      


Q ss_pred             -----cCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          45 -----VLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        45 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                           ......+..+++++.+||.+||+.||.+||++.++++||||......
T Consensus       292 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~  343 (389)
T 3gni_B          292 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRR  343 (389)
T ss_dssp             --------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---
T ss_pred             cccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhc
Confidence                 00011334578999999999999999999999999999999876543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.65  E-value=1.2e-16  Score=134.57  Aligned_cols=86  Identities=24%  Similarity=0.374  Sum_probs=65.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-------------------CCC---------CCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-------------------PKV---------PVG   53 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~---------~~~   53 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..+....+......+                   +..         +..
T Consensus       237 ~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (464)
T 3ttj_A          237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS  316 (464)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccc
Confidence            5689999999999999999999999999887755433332211110                   000         000


Q ss_pred             -----------CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          54 -----------TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        54 -----------~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                                 .++++.+||.+||.+||.+|||++++++||||..
T Consensus       317 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          317 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             GSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence                       1567999999999999999999999999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=6.3e-17  Score=130.14  Aligned_cols=87  Identities=22%  Similarity=0.349  Sum_probs=71.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++||||+||++|+|++|..||.+.+..+....+.......+ ..+..++.++.+||.+||..||.+||++.+++
T Consensus       177 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l  256 (321)
T 1tki_A          177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL  256 (321)
T ss_dssp             TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            34578999999999999999999999999888776655544332221 12246899999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      +||||...
T Consensus       257 ~hp~~~~~  264 (321)
T 1tki_A          257 QHPWLKQK  264 (321)
T ss_dssp             HSHHHHSC
T ss_pred             cChhhccC
Confidence            99999754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.65  E-value=3.1e-16  Score=128.35  Aligned_cols=88  Identities=26%  Similarity=0.381  Sum_probs=68.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-----------------------CC-----CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-----------------------PK-----VPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------~~-----~~~~~   54 (249)
                      ..|+.++||||+||++|||++|++||.+.+.......+......+                       +.     .....
T Consensus       205 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (367)
T 2fst_X          205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA  284 (367)
T ss_dssp             CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTC
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCC
Confidence            578999999999999999999999999887755433322211100                       00     11246


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++.+.+||.+||..||.+||++.+++.||||.....
T Consensus       285 ~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          285 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             CHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence            889999999999999999999999999999986543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.65  E-value=2.2e-16  Score=126.27  Aligned_cols=90  Identities=22%  Similarity=0.351  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CCCC---------CCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VPKV---------PVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~~---------~~~~   54 (249)
                      ..|+.++||||+||++|+|++|++||.+.+..+....+......                   .+..         ...+
T Consensus       178 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (311)
T 4agu_A          178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI  257 (311)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTC
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccc
Confidence            56899999999999999999999999988776544333221100                   0000         1347


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      +.++.+||.+||..||.+|||++++++||||.......
T Consensus       258 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  295 (311)
T 4agu_A          258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE  295 (311)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC---
T ss_pred             cHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHH
Confidence            88999999999999999999999999999999765443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.65  E-value=2.7e-16  Score=124.09  Aligned_cols=88  Identities=20%  Similarity=0.282  Sum_probs=72.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++||||+||++|+|++|+.||.+.+.......+...... +......+++++.+||.+||..||.+||++.+++
T Consensus       181 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  260 (284)
T 3kk8_A          181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL  260 (284)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHh
Confidence            456889999999999999999999999988887766555443322 2223356899999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +||||....
T Consensus       261 ~h~~~~~~~  269 (284)
T 3kk8_A          261 KVPWICNRE  269 (284)
T ss_dssp             TSHHHHSCC
T ss_pred             cCccccCCh
Confidence            999998543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.64  E-value=1.2e-16  Score=129.59  Aligned_cols=87  Identities=22%  Similarity=0.313  Sum_probs=70.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..+....+....... ......+++++.+||.+||..||.+||++.++++
T Consensus       251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            678999999999999999999999999888776655443332221 1222347899999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       331 hp~~~~~~  338 (345)
T 3hko_A          331 HPWISQFS  338 (345)
T ss_dssp             SHHHHTTS
T ss_pred             ChhhccCh
Confidence            99998654

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.64  E-value=6.8e-16  Score=122.66  Aligned_cols=87  Identities=24%  Similarity=0.298  Sum_probs=67.4

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC---------------CC-----------CCCCCHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP---------------KV-----------PVGTSAE   57 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------~~-----------~~~~~~~   57 (249)
                      .|+.++|||||||++|||++|+.||.+.+..+....+......+.               ..           ...++++
T Consensus       180 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (299)
T 2r3i_A          180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDED  259 (299)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHH
T ss_pred             cCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHH
Confidence            378899999999999999999999998877654433322111100               01           1236889


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      +.+||.+||..||.+||++.++++||||.....
T Consensus       260 ~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          260 GRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  292 (299)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             HHHHHHHhcCcCcccCCCHHHHhcChhhhcCCC
Confidence            999999999999999999999999999986543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.64  E-value=4.6e-16  Score=126.93  Aligned_cols=85  Identities=22%  Similarity=0.369  Sum_probs=66.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC-----------------------CC-------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK-----------------------VP-------   51 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------------~~-------   51 (249)
                      +.+|+.++|||||||++|||++|+.||.+.+..+....+.......+.                       .|       
T Consensus       233 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  312 (360)
T 3llt_A          233 NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSIN  312 (360)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHH
T ss_pred             CCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchh
Confidence            567999999999999999999999999988776655444332221110                       00       


Q ss_pred             -------------CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCC
Q psy4166          52 -------------VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQ   86 (249)
Q Consensus        52 -------------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~   86 (249)
                                   ...++.+.+||.+||+.||.+||++.++++||||+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          313 SIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                         01236788999999999999999999999999985

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.64  E-value=2.2e-16  Score=124.87  Aligned_cols=84  Identities=26%  Similarity=0.362  Sum_probs=64.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-HH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP-PQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++||||+||++|||++|+.||..... .. ........  .....+..+++++.+++.+||..||.+||++.++
T Consensus       187 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~  264 (290)
T 3fme_A          187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP--SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL  264 (290)
T ss_dssp             C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC--CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHH
Confidence            35688999999999999999999999986433 22 22222222  1222234689999999999999999999999999


Q ss_pred             hcCCCCCC
Q psy4166          80 FAHPFLQP   87 (249)
Q Consensus        80 ~~~~~~~~   87 (249)
                      ++||||..
T Consensus       265 l~hp~f~~  272 (290)
T 3fme_A          265 MQHPFFTL  272 (290)
T ss_dssp             TTSHHHHH
T ss_pred             HhCccccc
Confidence            99999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.64  E-value=2.8e-16  Score=129.36  Aligned_cols=86  Identities=26%  Similarity=0.356  Sum_probs=67.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-----------------C---------CCCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-----------------P---------KVPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------~---------~~~~~~~~   56 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......+                 +         ..+...++
T Consensus       217 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (383)
T 3eb0_A          217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS  296 (383)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCH
T ss_pred             CCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCH
Confidence            358999999999999999999999999887765443332211100                 0         02445789


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                      ++.+||.+||.+||.+|||+.++++||||...
T Consensus       297 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          297 LAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            99999999999999999999999999999754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.64  E-value=1e-15  Score=124.56  Aligned_cols=88  Identities=26%  Similarity=0.374  Sum_probs=69.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc----------------------------CCCCCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV----------------------------LVPKVPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~   54 (249)
                      ..|+.++||||+||++|||++|+.||.+.+..+....+.....                            .....+..+
T Consensus       199 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (353)
T 3coi_A          199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA  278 (353)
T ss_dssp             SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTS
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCc
Confidence            5788999999999999999999999998876554333221100                            011223457


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++++.+||.+||..||.+||++.++++||||.....
T Consensus       279 ~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  314 (353)
T 3coi_A          279 SPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD  314 (353)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccC
Confidence            899999999999999999999999999999986543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.64  E-value=5.4e-16  Score=122.93  Aligned_cols=86  Identities=27%  Similarity=0.359  Sum_probs=63.7

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCC-CCCCCHHHHHHHHHhcccCCC--------------------------CCCCCCCH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAP-FIANSPPQLKQYYEKNLVLVP--------------------------KVPVGTSA   56 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~p-f~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~   56 (249)
                      .|+.++||||+||++|||++|..| |.+.+.......+......+.                          .....+++
T Consensus       178 ~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (292)
T 3o0g_A          178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA  257 (292)
T ss_dssp             CCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCH
T ss_pred             CcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccCh
Confidence            489999999999999999987766 555555444333322111100                          11224789


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++++||.+||+.||.+|||++++++||||.+..
T Consensus       258 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            999999999999999999999999999998653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.64  E-value=6.3e-16  Score=126.76  Aligned_cols=87  Identities=28%  Similarity=0.425  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-----------------------C-----CCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-----------------------P-----KVPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------~-----~~~~~~   54 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..+....+......+                       +     ..+..+
T Consensus       217 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (371)
T 4exu_A          217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA  296 (371)
T ss_dssp             SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTS
T ss_pred             CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhcccc
Confidence            578999999999999999999999999887655443332211110                       0     012346


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++++.+||.+||+.||.+||++.++++||||....
T Consensus       297 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          297 SPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             ChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence            89999999999999999999999999999998654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.64  E-value=2.5e-16  Score=127.73  Aligned_cols=85  Identities=29%  Similarity=0.383  Sum_probs=65.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++|||||||++|||++|+.||.+....................+...+.++.+||.+||..||.+||++.++++|
T Consensus       195 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            56889999999999999999999999875443221111122223334566678899999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          83 PFLQP   87 (249)
Q Consensus        83 ~~~~~   87 (249)
                      |||..
T Consensus       275 p~~~~  279 (343)
T 3dbq_A          275 PYVQI  279 (343)
T ss_dssp             HHHHS
T ss_pred             ccccc
Confidence            99974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.64  E-value=2.5e-16  Score=129.94  Aligned_cols=85  Identities=28%  Similarity=0.381  Sum_probs=65.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|+.||.+..... ....+. ........+...+.++.+||.+||..||.+||++.++++
T Consensus       242 ~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH-CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh-CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            368999999999999999999999998754432 222121 112223445567899999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       321 hp~~~~~  327 (390)
T 2zmd_A          321 HPYVQIQ  327 (390)
T ss_dssp             SHHHHSC
T ss_pred             CcCcccc
Confidence            9999743

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.64  E-value=2.8e-16  Score=128.51  Aligned_cols=87  Identities=25%  Similarity=0.290  Sum_probs=67.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-----------------------CC-----CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-----------------------PK-----VPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------~~-----~~~~~   54 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+......+                       ..     ....+
T Consensus       207 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (364)
T 3qyz_A          207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA  286 (364)
T ss_dssp             CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTS
T ss_pred             CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCC
Confidence            458999999999999999999999999887655433332111110                       00     11357


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++++.+||.+||..||.+||++.++++||||....
T Consensus       287 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          287 DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            89999999999999999999999999999998653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.64  E-value=8.3e-16  Score=123.62  Aligned_cols=90  Identities=28%  Similarity=0.291  Sum_probs=70.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC------------------------CCCCCCCCHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV------------------------PKVPVGTSAE   57 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~   57 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+......+                        ...+..++..
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 1blx_A          193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDEL  272 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHH
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHH
Confidence            4578999999999999999999999999887765544332211100                        0122457899


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                      +.+||.+||..||.+||++.++++||||......
T Consensus       273 ~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          273 GKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence            9999999999999999999999999999876543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.64  E-value=3.1e-16  Score=123.76  Aligned_cols=85  Identities=24%  Similarity=0.389  Sum_probs=71.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|+|++|..||.+.+.......+...   ....+..++.++.++|.+||..||.+||++.++++
T Consensus       186 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV---DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc---ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            456889999999999999999999999988776655444332   23445678999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       263 h~~~~~~~  270 (284)
T 2vgo_A          263 HPWVKANS  270 (284)
T ss_dssp             CHHHHHHC
T ss_pred             CHHHHhhc
Confidence            99998543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.64  E-value=1.5e-16  Score=130.53  Aligned_cols=87  Identities=25%  Similarity=0.300  Sum_probs=71.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-cCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL-VLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+.... .........+++++.+||.+||..||.+||++.+++
T Consensus       262 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l  341 (373)
T 2x4f_A          262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL  341 (373)
T ss_dssp             TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence            4568889999999999999999999999988776655443332 222223356899999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      +||||...
T Consensus       342 ~hp~~~~~  349 (373)
T 2x4f_A          342 KHPWLSDH  349 (373)
T ss_dssp             HSHHHHCH
T ss_pred             cCcCcCCC
Confidence            99999854

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.64  E-value=2.6e-16  Score=130.26  Aligned_cols=87  Identities=26%  Similarity=0.439  Sum_probs=67.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ----LKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+...    ....+..... .+...+..++.++.+||.+||..||.+||++
T Consensus       237 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~  316 (400)
T 1nxk_A          237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  316 (400)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCH
Confidence            5689999999999999999999999998765422    2222222222 2222235689999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q psy4166          77 EQLFAHPFLQPL   88 (249)
Q Consensus        77 ~~i~~~~~~~~~   88 (249)
                      .++++|+||...
T Consensus       317 ~eil~hp~~~~~  328 (400)
T 1nxk_A          317 TEFMNHPWIMQS  328 (400)
T ss_dssp             HHHHHSHHHHTT
T ss_pred             HHHhcCccccCC
Confidence            999999999753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.63  E-value=1.9e-16  Score=126.88  Aligned_cols=90  Identities=24%  Similarity=0.393  Sum_probs=69.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC----------------------CC-----CCCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL----------------------VP-----KVPVGTS   55 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----------------------~~-----~~~~~~~   55 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..+....+......                      .+     ..+..++
T Consensus       200 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (320)
T 2i6l_A          200 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS  279 (320)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCC
T ss_pred             ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhh
Confidence            57889999999999999999999999988775544333221110                      00     0124578


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~   92 (249)
                      .++.+||.+||..||.+||++.++++||||....+..
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          280 REAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM  316 (320)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred             HHHHHHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence            9999999999999999999999999999998765543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.63  E-value=5.2e-16  Score=123.71  Aligned_cols=87  Identities=21%  Similarity=0.372  Sum_probs=72.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++||||+||++|||++|+.||.+.+...+...+...... ....+..+++++.+||.+||..||.+||++.+++
T Consensus       181 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  260 (304)
T 2jam_A          181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKAL  260 (304)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            456889999999999999999999999988887766555443322 2234456899999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      +||||...
T Consensus       261 ~h~~~~~~  268 (304)
T 2jam_A          261 SHPWIDGN  268 (304)
T ss_dssp             TSHHHHSS
T ss_pred             cCccccCC
Confidence            99999753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.63  E-value=3.3e-16  Score=128.16  Aligned_cols=84  Identities=25%  Similarity=0.411  Sum_probs=68.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|+.||.+.+.......+.......+ ..+...+.++.+||.+||..||.+||++.++++
T Consensus       280 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          280 PGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             CCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            3688999999999999999999999998877666554443322211 112467899999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      ||||.
T Consensus       360 hp~f~  364 (365)
T 2y7j_A          360 HPFFE  364 (365)
T ss_dssp             SGGGC
T ss_pred             CcccC
Confidence            99996

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.63  E-value=6.8e-16  Score=122.60  Aligned_cols=89  Identities=22%  Similarity=0.329  Sum_probs=71.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|+.||.+.+.......+....... ......++.++.++|.+||..||.+||++.++++
T Consensus       204 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            468889999999999999999999999888776655444433222 2222458899999999999999999999999999


Q ss_pred             CCCCCCCCCC
Q psy4166          82 HPFLQPLAPH   91 (249)
Q Consensus        82 ~~~~~~~~~~   91 (249)
                      ||||.....+
T Consensus       284 h~~~~~~~~~  293 (298)
T 1phk_A          284 HPFFQQYVVE  293 (298)
T ss_dssp             SGGGCTTC--
T ss_pred             ChHhhhccch
Confidence            9999976543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.63  E-value=3.7e-16  Score=123.01  Aligned_cols=85  Identities=26%  Similarity=0.424  Sum_probs=72.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++||||+||++|+|++|+.||.+.+..+....+....   ...+..+++++.+||.+||..||.+||++.++++
T Consensus       181 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE---FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC---CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC---CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            4567889999999999999999999999888776665554432   3345668999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       258 h~~~~~~~  265 (279)
T 3fdn_A          258 HPWITANS  265 (279)
T ss_dssp             CHHHHHHC
T ss_pred             CccccCCc
Confidence            99998543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.63  E-value=2.5e-16  Score=127.97  Aligned_cols=89  Identities=24%  Similarity=0.421  Sum_probs=68.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC--------------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK--------------------------------   49 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------------   49 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+.......|.                                
T Consensus       213 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (355)
T 2eu9_A          213 ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKEN  292 (355)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHH
T ss_pred             cCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhcccccc
Confidence            567999999999999999999999999988776554443332211110                                


Q ss_pred             ---------CCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          50 ---------VPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        50 ---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                               .....+.++.+||.+||..||.+||++.++++||||....+
T Consensus       293 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          293 CKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             CCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             CCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence                     00112457889999999999999999999999999997654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.63  E-value=4e-16  Score=123.69  Aligned_cols=86  Identities=27%  Similarity=0.456  Sum_probs=67.6

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .|+.++|||||||++|+|++|+.||...................+..+..+++++.++|.+||..||.+||++.+++.|+
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~  280 (295)
T 2clq_A          201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDE  280 (295)
T ss_dssp             GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence            37889999999999999999999997654433222222222334456778899999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          84 FLQPLA   89 (249)
Q Consensus        84 ~~~~~~   89 (249)
                      ||....
T Consensus       281 ~~~~~~  286 (295)
T 2clq_A          281 FLKVSS  286 (295)
T ss_dssp             GGCC--
T ss_pred             hhhhcc
Confidence            998543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.63  E-value=3.8e-16  Score=125.01  Aligned_cols=88  Identities=22%  Similarity=0.346  Sum_probs=71.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|+|++|+.||.+.+.......+..........+..++.++.+||.+||..||.+||++.++++
T Consensus       199 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            35688999999999999999999999988777655444444333333345567899999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |+||....
T Consensus       279 ~~~~~~~~  286 (314)
T 3com_A          279 HPFVRSAK  286 (314)
T ss_dssp             SHHHHTCC
T ss_pred             CHHHhcCC
Confidence            99998644

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.63  E-value=5.4e-16  Score=127.02  Aligned_cols=88  Identities=22%  Similarity=0.326  Sum_probs=61.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHhcccC----------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-------QLKQYYEKNLVL----------------------------   46 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~----------------------------   46 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..       .+..........                            
T Consensus       209 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (373)
T 1q8y_A          209 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLK  288 (373)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCC
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccc
Confidence            457899999999999999999999999865421       112221111000                            


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          47 ----------VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        47 ----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                                ....+...+.++.+||.+||+.||.+||++.++++||||....
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          289 FWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             BCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             ccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence                      0012223457889999999999999999999999999998654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.62  E-value=1.5e-15  Score=127.95  Aligned_cols=92  Identities=25%  Similarity=0.339  Sum_probs=64.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-----------CCCCCCCCCH---------------------HHHHHHHHhcc-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-----------GKAPFIANSP---------------------PQLKQYYEKNL-----   44 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-----------g~~pf~~~~~---------------------~~~~~~~~~~~-----   44 (249)
                      +..|+.++|||||||++|||++           |+++|.+.+.                     ..+..+.....     
T Consensus       258 ~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~  337 (458)
T 3rp9_A          258 QENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE  337 (458)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHH
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHH
Confidence            4579999999999999999998           7788876542                     11111111000     


Q ss_pred             --------------cCCC--------CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCCC
Q psy4166          45 --------------VLVP--------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        45 --------------~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~~   93 (249)
                                    ...+        ......++++.+||.+||.+||.+|+|++++++||||....+...
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~  408 (458)
T 3rp9_A          338 DIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEV  408 (458)
T ss_dssp             HHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGGG
T ss_pred             HHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCcc
Confidence                          0000        011346899999999999999999999999999999998766544

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.62  E-value=3.9e-16  Score=124.10  Aligned_cols=81  Identities=20%  Similarity=0.407  Sum_probs=66.8

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPF   84 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~   84 (249)
                      ++.++|||||||++|||++|+.||.+.+.......+.......+ ....+++++.+||.+||..||.+||++.++++|||
T Consensus       217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP-DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCC-CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence            46789999999999999999999998877666554444332222 23468999999999999999999999999999999


Q ss_pred             CC
Q psy4166          85 LQ   86 (249)
Q Consensus        85 ~~   86 (249)
                      |.
T Consensus       296 ~~  297 (298)
T 2zv2_A          296 VT  297 (298)
T ss_dssp             HH
T ss_pred             cc
Confidence            85

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.62  E-value=1.3e-16  Score=128.51  Aligned_cols=87  Identities=26%  Similarity=0.407  Sum_probs=63.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP-------PQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDR   73 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R   73 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+.       .++...+....... ...+..+++++.+||.+||..||.+|
T Consensus       183 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  262 (325)
T 3kn6_A          183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR  262 (325)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred             CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence            46789999999999999999999999987543       22222222221111 11113578999999999999999999


Q ss_pred             CCHHHHhcCCCCCCC
Q psy4166          74 ISFEQLFAHPFLQPL   88 (249)
Q Consensus        74 ~~~~~i~~~~~~~~~   88 (249)
                      |++.+++.|+||...
T Consensus       263 pt~~ell~h~w~~~~  277 (325)
T 3kn6_A          263 LKMSGLRYNEWLQDG  277 (325)
T ss_dssp             CCTTTSTTCGGGCTT
T ss_pred             CCHHHHhcChhhccC
Confidence            999999999999854

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.62  E-value=3.2e-16  Score=132.92  Aligned_cols=86  Identities=26%  Similarity=0.341  Sum_probs=72.3

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      .|+.++||||+||++|+|++|++||.+.+..++...+....... .+.+..+++++++||.+||..||.+||++.++++|
T Consensus       203 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            68999999999999999999999999998877766665543222 12234689999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          83 PFLQPLA   89 (249)
Q Consensus        83 ~~~~~~~   89 (249)
                      |||....
T Consensus       283 ~~~~~~~  289 (484)
T 3nyv_A          283 EWIQTYT  289 (484)
T ss_dssp             HHHHHHT
T ss_pred             hhhcccc
Confidence            9998543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.62  E-value=1.4e-15  Score=119.59  Aligned_cols=85  Identities=25%  Similarity=0.455  Sum_probs=71.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|+|++|+.||.+.+..++...+....  .+..+..++.++.++|.+||..||.+||++.++++
T Consensus       190 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  267 (279)
T 2w5a_A          190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  267 (279)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc--cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            3568899999999999999999999999888776665554433  23456678999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      |+|+.+.
T Consensus       268 ~~~~~~~  274 (279)
T 2w5a_A          268 NPLILEH  274 (279)
T ss_dssp             STTCCGG
T ss_pred             Chhhhhh
Confidence            9999853

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.62  E-value=6.6e-16  Score=125.54  Aligned_cols=86  Identities=20%  Similarity=0.215  Sum_probs=69.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+..... +...+..+++.+.+||.+||+.||.+||+++++++
T Consensus       227 ~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            35789999999999999999999999988877655443333322 22234568999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      |+|+...
T Consensus       306 h~~~~~~  312 (348)
T 1u5q_A          306 HRFVLRE  312 (348)
T ss_dssp             CHHHHSC
T ss_pred             Chhhhcc
Confidence            9999743

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.62  E-value=2.8e-16  Score=126.88  Aligned_cols=87  Identities=22%  Similarity=0.402  Sum_probs=67.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC--------------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK--------------------------------   49 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------------   49 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+.......+.                                
T Consensus       208 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
T 1z57_A          208 ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRA  287 (339)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHH
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhc
Confidence            567999999999999999999999999988776654443332211110                                


Q ss_pred             ---------CCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          50 ---------VPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        50 ---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                               .+...++++.+||.+||..||.+||++.++++||||...
T Consensus       288 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          288 CKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             CCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             CcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                     011234678899999999999999999999999999854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.62  E-value=2.7e-16  Score=134.31  Aligned_cols=88  Identities=22%  Similarity=0.407  Sum_probs=71.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC--
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANS----PPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS--   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~--   75 (249)
                      +.+|+.++|||||||++|||++|++||.+.+    ..++...+..   .....|..+++++.+||.+||..||.+||+  
T Consensus       363 ~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE---QAVTYPDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH---CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             CCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh---cccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence            5679999999999999999999999998763    2333333322   233456778999999999999999999996  


Q ss_pred             ---HHHHhcCCCCCCCCCCC
Q psy4166          76 ---FEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        76 ---~~~i~~~~~~~~~~~~~   92 (249)
                         +++++.||||..+.|..
T Consensus       440 ~~~a~ei~~Hpff~~i~w~~  459 (543)
T 3c4z_A          440 DGSCDGLRTHPLFRDISWRQ  459 (543)
T ss_dssp             TTBSHHHHTSGGGTTCCHHH
T ss_pred             ccCHHHHHcCccccCCCHHH
Confidence               58999999999887654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.62  E-value=2.2e-16  Score=135.39  Aligned_cols=89  Identities=18%  Similarity=0.412  Sum_probs=72.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC---
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP----PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI---   74 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~---   74 (249)
                      +.+|+.++|||||||++|||++|++||.+.+.    ..+...+..   .....+..+++++.+||.+||..||.+|+   
T Consensus       359 ~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~---~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~  435 (576)
T 2acx_A          359 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VPEEYSERFSPQARSLCSQLLCKDPAERLGCR  435 (576)
T ss_dssp             TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH---CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred             CCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc---ccccCCccCCHHHHHHHHHhccCCHHHcCCCC
Confidence            45789999999999999999999999987642    333333332   23345677999999999999999999999   


Q ss_pred             --CHHHHhcCCCCCCCCCCCC
Q psy4166          75 --SFEQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        75 --~~~~i~~~~~~~~~~~~~~   93 (249)
                        +++++++||||..+.|..+
T Consensus       436 ~~sa~eil~HpfF~~i~w~~l  456 (576)
T 2acx_A          436 GGSAREVKEHPLFKKLNFKRL  456 (576)
T ss_dssp             SSHHHHHHTSGGGTTCCHHHH
T ss_pred             CCCHHHHHhChhhccCCHHHH
Confidence              7899999999998876543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.62  E-value=3.4e-16  Score=126.90  Aligned_cols=84  Identities=23%  Similarity=0.418  Sum_probs=66.9

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIAN---SPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +|+.++||||+||++|||++|+.||.+.   +..++...+...... ....+..+++++.+||.+||..||.+||++.++
T Consensus       196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i  275 (342)
T 2qr7_A          196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV  275 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            4778999999999999999999999863   344444444333222 223445789999999999999999999999999


Q ss_pred             hcCCCCCC
Q psy4166          80 FAHPFLQP   87 (249)
Q Consensus        80 ~~~~~~~~   87 (249)
                      ++||||..
T Consensus       276 l~hp~~~~  283 (342)
T 2qr7_A          276 LRHPWIVH  283 (342)
T ss_dssp             TTSHHHHT
T ss_pred             hcCCeecC
Confidence            99999964

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.62  E-value=1.1e-16  Score=129.48  Aligned_cols=83  Identities=23%  Similarity=0.382  Sum_probs=66.6

Q ss_pred             CCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKY-DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y-~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..| +.++||||+||++|+|++|+.||.+.....+..   .........|..+++++.+||.+||..||.+|||++++++
T Consensus       182 ~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             SGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---CCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             CCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---HHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            344 679999999999999999999998765443321   1222233456678999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       259 hp~~~~~  265 (336)
T 3h4j_B          259 DPWFNVN  265 (336)
T ss_dssp             CHHHHTT
T ss_pred             ChhhccC
Confidence            9999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.61  E-value=8.1e-16  Score=120.77  Aligned_cols=82  Identities=16%  Similarity=0.172  Sum_probs=63.5

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCC
Q psy4166           6 DAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPF   84 (249)
Q Consensus         6 ~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~   84 (249)
                      +.++|||||||++|||++|+.||.+.+... ......... .....+..+++.+.++|.+||..||.+||++.++++|+|
T Consensus       186 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~  264 (276)
T 2yex_A          186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW  264 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC-TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc-cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcc
Confidence            668999999999999999999998765432 122222211 111223457899999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          85 LQPL   88 (249)
Q Consensus        85 ~~~~   88 (249)
                      |...
T Consensus       265 ~~~~  268 (276)
T 2yex_A          265 YNKP  268 (276)
T ss_dssp             TTCC
T ss_pred             ccCh
Confidence            9854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.61  E-value=1e-15  Score=123.35  Aligned_cols=88  Identities=19%  Similarity=0.287  Sum_probs=64.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHH-------------HHhcccC---------------------C
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSP-PQLKQY-------------YEKNLVL---------------------V   47 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~-~~~~~~-------------~~~~~~~---------------------~   47 (249)
                      ..|+.++||||+||++|||++|+.||..... ......             +......                     .
T Consensus       206 ~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (330)
T 3nsz_A          206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH  285 (330)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCC
T ss_pred             CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcc
Confidence            5689999999999999999999999954432 211111             1110000                     0


Q ss_pred             CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          48 PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        48 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ...+..+++++.+||.+||..||.+|||++++++||||..+..
T Consensus       286 ~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          286 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             TTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             ccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            0112237899999999999999999999999999999997654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.61  E-value=6.7e-16  Score=131.23  Aligned_cols=85  Identities=29%  Similarity=0.464  Sum_probs=72.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|+|++|++||.+.+..++...+....... ...+..+++++.+||.+||+.||.+|||+.++++
T Consensus       212 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            468999999999999999999999999998887766655543322 2223568999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||..
T Consensus       292 hp~~~~  297 (494)
T 3lij_A          292 HPWIKE  297 (494)
T ss_dssp             CHHHHH
T ss_pred             Cccccc
Confidence            999975

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.61  E-value=8.6e-16  Score=120.84  Aligned_cols=84  Identities=27%  Similarity=0.478  Sum_probs=61.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++||||+||++|||++|+.||...+......   .........+..++.++.++|.+||..||.+||++.++++
T Consensus       186 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---HHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            3467889999999999999999999998765543322   2222223456678999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       263 h~~~~~~  269 (278)
T 3cok_A          263 HPFMSRN  269 (278)
T ss_dssp             STTTC--
T ss_pred             CccccCC
Confidence            9999853

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.61  E-value=3.9e-16  Score=132.41  Aligned_cols=87  Identities=25%  Similarity=0.379  Sum_probs=72.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|+|++|++||.+.+..+....+....... .+.+..+++++++||.+||..||.+||++.++++
T Consensus       197 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            358999999999999999999999999988877766554433222 2223468999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       277 hp~~~~~~  284 (486)
T 3mwu_A          277 HPWIQKYS  284 (486)
T ss_dssp             CHHHHHTC
T ss_pred             CHhhccCc
Confidence            99998654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.61  E-value=4.3e-16  Score=128.54  Aligned_cols=85  Identities=24%  Similarity=0.337  Sum_probs=61.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHhcccCCC---------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP------QLKQYYEKNLVLVP---------------------------   48 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~---------------------------   48 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..      .....+.......+                           
T Consensus       267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
T 1wak_A          267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK  346 (397)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence            457999999999999999999999999865521      11111111100000                           


Q ss_pred             ------------CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCC
Q psy4166          49 ------------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQ   86 (249)
Q Consensus        49 ------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~   86 (249)
                                  ..+...+..+.+||.+||+.||.+||++.++++||||.
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                        01112346788999999999999999999999999996

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.61  E-value=4.7e-15  Score=123.93  Aligned_cols=42  Identities=31%  Similarity=0.453  Sum_probs=37.6

Q ss_pred             CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCCCC
Q psy4166          52 VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL   93 (249)
Q Consensus        52 ~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~~~   93 (249)
                      ..+++++.+||.+||..||.+|||++++++||||....+...
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~  373 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL  373 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTT
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCccc
Confidence            357899999999999999999999999999999998766543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.61  E-value=9.6e-16  Score=122.69  Aligned_cols=86  Identities=29%  Similarity=0.373  Sum_probs=66.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++|||||||++|||++|+.||......................+...+.++.++|.+||..||.+||++.++++|
T Consensus       214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            47888999999999999999999999876443221111112222334456678999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          83 PFLQPL   88 (249)
Q Consensus        83 ~~~~~~   88 (249)
                      +||...
T Consensus       294 ~~~~~~  299 (313)
T 3cek_A          294 PYVQIQ  299 (313)
T ss_dssp             HHHHCC
T ss_pred             ccccCC
Confidence            999853

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.61  E-value=1.8e-15  Score=120.27  Aligned_cols=87  Identities=22%  Similarity=0.314  Sum_probs=65.1

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-------CCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-------PKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      .|+.++|||||||++|||++|+.||.+.................       +.....++.++.++|.+||..||.+||++
T Consensus       203 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  282 (303)
T 2vwi_A          203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA  282 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCH
Confidence            57889999999999999999999998876654433222221111       11234578999999999999999999999


Q ss_pred             HHHhcCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAP   90 (249)
Q Consensus        77 ~~i~~~~~~~~~~~   90 (249)
                      .++++|+||.....
T Consensus       283 ~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          283 AELLRHKFFQKAKN  296 (303)
T ss_dssp             HHHHTSTTC-----
T ss_pred             HHHhhChhhhcCCC
Confidence            99999999986543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.61  E-value=1e-15  Score=122.69  Aligned_cols=85  Identities=19%  Similarity=0.349  Sum_probs=65.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIAN-SPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|+.||... ...+....+.............+++++.+||.+||..||.+||++.++++
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            46888999999999999999999999874 33333333333332222223458999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      |+||..
T Consensus       284 h~~~~~  289 (318)
T 2dyl_A          284 HSFIKR  289 (318)
T ss_dssp             SHHHHH
T ss_pred             CHHHHh
Confidence            999974

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=122.85  Aligned_cols=87  Identities=24%  Similarity=0.347  Sum_probs=68.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|+|++|..||.+.+.......+.... .+...+..++..+.+||.+||..||.+||++.++++
T Consensus       208 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             ---CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc-cccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            3568899999999999999999999998877765544333322 222234568999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       287 hp~~~~~~  294 (326)
T 2x7f_A          287 HPFIRDQP  294 (326)
T ss_dssp             SHHHHCCT
T ss_pred             ChHHhhCc
Confidence            99998543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.60  E-value=3.6e-16  Score=128.22  Aligned_cols=86  Identities=26%  Similarity=0.407  Sum_probs=65.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-------------------CCC------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-------------------PKV------------   50 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~------------   50 (249)
                      +..|+.++||||+||++|||++|+.||.+.+.......+......+                   +..            
T Consensus       200 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (371)
T 2xrw_A          200 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV  279 (371)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGG
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccc
Confidence            5679999999999999999999999999887755433332211100                   000            


Q ss_pred             --CC------CCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          51 --PV------GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        51 --~~------~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                        +.      ..+.++.+||.+||..||.+|||++++++||||..
T Consensus       280 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          280 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence              00      01567899999999999999999999999999974

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.60  E-value=6.1e-16  Score=131.79  Aligned_cols=86  Identities=24%  Similarity=0.334  Sum_probs=72.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|+|++|.+||.+.+..++...+.......+ ..+..+++++.+||.+||..||.+||++.++++
T Consensus       222 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          222 KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            4689999999999999999999999999988877666655432221 122568999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       302 h~~~~~~  308 (504)
T 3q5i_A          302 SRWIKKY  308 (504)
T ss_dssp             SHHHHHT
T ss_pred             CHhhhhc
Confidence            9999754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.60  E-value=7.8e-16  Score=121.70  Aligned_cols=85  Identities=26%  Similarity=0.397  Sum_probs=70.2

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      .|+.++|||||||++|+|++|..||.+.+..+....+....... ......+++++.++|.+||..||.+||++.++++|
T Consensus       198 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            58889999999999999999999999988877665554433221 12224689999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          83 PFLQPL   88 (249)
Q Consensus        83 ~~~~~~   88 (249)
                      |||...
T Consensus       278 p~~~~~  283 (287)
T 2wei_A          278 PWIQKY  283 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHhcc
Confidence            999754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.60  E-value=1.9e-15  Score=127.55  Aligned_cols=84  Identities=21%  Similarity=0.364  Sum_probs=69.9

Q ss_pred             CCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKY-DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y-~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..| +.++||||+||++|||++|+.||.+.+...+...+....   ...|..+++++.+||.+||..||.+||++.++++
T Consensus       190 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          190 RLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI---FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             CCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC---cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            344 679999999999999999999999887766655444332   2345678999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       267 hp~~~~~~  274 (476)
T 2y94_A          267 HEWFKQDL  274 (476)
T ss_dssp             CHHHHTTC
T ss_pred             CHHhhhcC
Confidence            99997543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.60  E-value=1.9e-15  Score=123.37  Aligned_cols=87  Identities=18%  Similarity=0.330  Sum_probs=67.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-----------------------------------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-----------------------------------------   40 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-----------------------------------------   40 (249)
                      +..|+.++|||||||++|||++|+.||...+..+.....                                         
T Consensus       204 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (360)
T 3eqc_A          204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDY  283 (360)
T ss_dssp             TCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhH
Confidence            467899999999999999999999999887665432221                                         


Q ss_pred             -HhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          41 -EKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        41 -~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                       ... ......+..++.++.+||.+||..||.+||++.++++||||....
T Consensus       284 ~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          284 IVNE-PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             HHHS-CCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             Hhcc-CCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence             111 111111234789999999999999999999999999999998543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.59  E-value=1.1e-15  Score=130.88  Aligned_cols=110  Identities=14%  Similarity=0.053  Sum_probs=86.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|.++.||++  ...+..+|+|+........        .+.+.+|+.+++.++   ||||+++..++.+....|+
T Consensus       342 ~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          342 HLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK---DFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG---GGTCCCCCEEEEETTTTEE
T ss_pred             CEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC---CCCcCceEEEEEeCCccEE
Confidence            36789999999988  3567889999875432211        134689999999887   9999966666667778899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||||+||+|.+++.+        +..++.|++.|+.|||       |+||+|||+..
T Consensus       417 VmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~  466 (540)
T 3en9_A          417 MMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK  466 (540)
T ss_dssp             EEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS
T ss_pred             EEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC
Confidence            9999999999999876        5689999999999999       99999999865

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.59  E-value=2.2e-15  Score=122.98  Aligned_cols=87  Identities=21%  Similarity=0.253  Sum_probs=67.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC---------------------C--------CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV---------------------P--------KVPVG   53 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------------------~--------~~~~~   53 (249)
                      ..|+.++||||+||++|+|++|+.||.+.+.......+......+                     .        ..+..
T Consensus       209 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (362)
T 3pg1_A          209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT  288 (362)
T ss_dssp             TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTT
T ss_pred             CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCC
Confidence            568999999999999999999999999887655443332111000                     0        01234


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      .++.+.+||.+||..||.+||++.++++||||....
T Consensus       289 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            688999999999999999999999999999999753

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.59  E-value=1.1e-15  Score=124.86  Aligned_cols=87  Identities=23%  Similarity=0.385  Sum_probs=61.8

Q ss_pred             CCCCCcc-hhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCC--CCCCCCCHHHHHHHHHhhhhCcccCCCHH
Q psy4166           2 SMKYDAK-ADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVP--KVPVGTSAELKELLLGLLKRNAMDRISFE   77 (249)
Q Consensus         2 ~~~y~~~-~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~   77 (249)
                      +..|+.+ +||||+||++|+|++|+.||.+..... ....+........  .....+++++.+||.+||..||.+||++.
T Consensus       191 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~  270 (361)
T 3uc3_A          191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIP  270 (361)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             CCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            3456555 899999999999999999998754421 1122222111111  22335799999999999999999999999


Q ss_pred             HHhcCCCCCCC
Q psy4166          78 QLFAHPFLQPL   88 (249)
Q Consensus        78 ~i~~~~~~~~~   88 (249)
                      ++++||||...
T Consensus       271 ell~hp~f~~~  281 (361)
T 3uc3_A          271 EIKTHSWFLKN  281 (361)
T ss_dssp             HHHTSHHHHTT
T ss_pred             HHHhCcchhcC
Confidence            99999999643

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.59  E-value=2.7e-16  Score=125.18  Aligned_cols=88  Identities=26%  Similarity=0.458  Sum_probs=63.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HhcccCCCCCC----CCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY-EKNLVLVPKVP----VGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++||||+||++|||++|+.||.+.+........ ..........+    ..+++++.+||.+||..||.+||++
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~  251 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  251 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCH
Confidence            356889999999999999999999999876553321111 01111111112    4578999999999999999999999


Q ss_pred             HHHhcCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLA   89 (249)
Q Consensus        77 ~~i~~~~~~~~~~   89 (249)
                      .++++||||....
T Consensus       252 ~e~l~hp~~~~~~  264 (299)
T 3m2w_A          252 TEFMNHPWIMQST  264 (299)
T ss_dssp             HHHHTSHHHHTGG
T ss_pred             HHHhcChhhcccc
Confidence            9999999998543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=1.2e-15  Score=124.43  Aligned_cols=90  Identities=24%  Similarity=0.399  Sum_probs=67.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      ..|+.++|||||||++|||++|+.||...+... ............+..+..++..+.+||.+||..||.+||     ++
T Consensus       237 ~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~  316 (355)
T 1vzo_A          237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDA  316 (355)
T ss_dssp             ---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTH
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCH
Confidence            357889999999999999999999997543211 111112222233455677899999999999999999999     99


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      .++++|+||....+..
T Consensus       317 ~ell~h~~f~~~~~~~  332 (355)
T 1vzo_A          317 DEIKEHLFFQKINWDD  332 (355)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHHcCcchhcCChhH
Confidence            9999999999876543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.59  E-value=1.3e-15  Score=119.58  Aligned_cols=80  Identities=20%  Similarity=0.399  Sum_probs=68.0

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166           6 DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus         6 ~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      +.++|||||||++|+|++|+.||.+.+.......+....   ...+..++.++.++|.+||..||.+||++.++++|+||
T Consensus       189 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~  265 (276)
T 2h6d_A          189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV---FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF  265 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc---ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhh
Confidence            578999999999999999999999887776655554432   23456689999999999999999999999999999999


Q ss_pred             CCC
Q psy4166          86 QPL   88 (249)
Q Consensus        86 ~~~   88 (249)
                      ...
T Consensus       266 ~~~  268 (276)
T 2h6d_A          266 KQD  268 (276)
T ss_dssp             HTT
T ss_pred             ccC
Confidence            753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.59  E-value=2e-15  Score=119.71  Aligned_cols=85  Identities=20%  Similarity=0.325  Sum_probs=70.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..++.++||||+||++|+|++|+.||.+....+....+...   ....+..+++.+.+++.+||..||.+||++.++++
T Consensus       189 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc---cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            356788999999999999999999999988776654444332   23446678999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |+||....
T Consensus       266 ~~~~~~~~  273 (294)
T 2rku_A          266 DEFFTSGY  273 (294)
T ss_dssp             SHHHHTSC
T ss_pred             ChheecCC
Confidence            99997543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.59  E-value=1e-15  Score=120.33  Aligned_cols=84  Identities=21%  Similarity=0.370  Sum_probs=69.3

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC-CCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK-VPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      .|+.++||||+||++|||++|+.||.+.+..+....+.......+. ....+++.+.+||.+||..||.+||++.++++|
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4788999999999999999999999998887766555444322221 112578999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          83 PFLQP   87 (249)
Q Consensus        83 ~~~~~   87 (249)
                      +||..
T Consensus       263 ~~~~~  267 (277)
T 3f3z_A          263 EWFEK  267 (277)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.59  E-value=2.6e-15  Score=120.64  Aligned_cols=90  Identities=19%  Similarity=0.359  Sum_probs=65.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC------
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS------   75 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~------   75 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..+....+....  ....+..+++++.+|+.+||..||.+||+      
T Consensus       214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  291 (323)
T 3qup_A          214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN--RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM  291 (323)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC--CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            468899999999999999999 999999888776665554433  23446678999999999999999999999      


Q ss_pred             -HHHHhcCCCCCCCCCCCCC
Q psy4166          76 -FEQLFAHPFLQPLAPHPLI   94 (249)
Q Consensus        76 -~~~i~~~~~~~~~~~~~~~   94 (249)
                       +++++.|+|+......++.
T Consensus       292 ~l~~~l~~~~~~~~~~~pl~  311 (323)
T 3qup_A          292 ELENILGHLSVLSTSQDPLY  311 (323)
T ss_dssp             HHHHHHHC------------
T ss_pred             HHHHHHHHhhhcCCCCCCCC
Confidence             7778899999877665543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.59  E-value=1e-15  Score=123.06  Aligned_cols=87  Identities=29%  Similarity=0.496  Sum_probs=67.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++|||||||++|+|++|..||.+.... .+...+..... ..+..+..+++++.+||.+||..||.+||++.++
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~  272 (322)
T 2ycf_A          193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA  272 (322)
T ss_dssp             TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHH
Confidence            356889999999999999999999999765442 23333332221 1122234678999999999999999999999999


Q ss_pred             hcCCCCCCC
Q psy4166          80 FAHPFLQPL   88 (249)
Q Consensus        80 ~~~~~~~~~   88 (249)
                      ++|+||...
T Consensus       273 l~h~~~~~~  281 (322)
T 2ycf_A          273 LRHPWLQDE  281 (322)
T ss_dssp             HTSGGGCCH
T ss_pred             hhCcCcCCH
Confidence            999999853

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.59  E-value=2.3e-15  Score=119.88  Aligned_cols=84  Identities=26%  Similarity=0.380  Sum_probs=70.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|+|++|+.||...........+....  .+..+..++..+.+||.+||..||.+||++.++++
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC--CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            4568899999999999999999999999887766555444332  33456678999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      |+||..
T Consensus       271 ~~~~~~  276 (303)
T 3a7i_A          271 HKFILR  276 (303)
T ss_dssp             CHHHHH
T ss_pred             Chhhhc
Confidence            999963

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.58  E-value=1.1e-15  Score=120.44  Aligned_cols=88  Identities=19%  Similarity=0.333  Sum_probs=71.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|+|++|..||.+.+..+....+....... ...+..+++.+.+|+.+||..||.+||++.+++
T Consensus       185 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l  264 (283)
T 3bhy_A          185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL  264 (283)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence            4678899999999999999999999999888776655443332211 112246789999999999999999999999999


Q ss_pred             cCCCCCCCC
Q psy4166          81 AHPFLQPLA   89 (249)
Q Consensus        81 ~~~~~~~~~   89 (249)
                      +|+||....
T Consensus       265 ~h~~~~~~~  273 (283)
T 3bhy_A          265 EHSWIKAIR  273 (283)
T ss_dssp             HCHHHHHHH
T ss_pred             hCHHHHHHH
Confidence            999998653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.58  E-value=1.3e-15  Score=127.18  Aligned_cols=87  Identities=17%  Similarity=0.263  Sum_probs=63.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..++.++||||+||++|||++ |..||......................+...+..+.+||.+||+.||.+||++.++++
T Consensus       204 ~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            467779999999999999999 9999976655443322211111111112234566899999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      ||||....
T Consensus       284 hp~f~~~~  291 (432)
T 3p23_A          284 HPFFWSLE  291 (432)
T ss_dssp             STTTCCHH
T ss_pred             CccccChH
Confidence            99998543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.58  E-value=6.5e-16  Score=128.66  Aligned_cols=86  Identities=29%  Similarity=0.496  Sum_probs=66.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++|++||.+.... .+...+..... ..+..+..+++.+.+||.+||..||.+||++.+++
T Consensus       319 ~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l  398 (419)
T 3i6u_A          319 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL  398 (419)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            56788999999999999999999999865432 23333332221 11222346889999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      +||||...
T Consensus       399 ~hp~~~~~  406 (419)
T 3i6u_A          399 RHPWLQDE  406 (419)
T ss_dssp             HSGGGCCH
T ss_pred             CCcccCCh
Confidence            99999853

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.58  E-value=3.1e-15  Score=120.97  Aligned_cols=85  Identities=20%  Similarity=0.325  Sum_probs=70.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|+.||.+....+....+...   ....+..+++++.+||.+||+.||.+||++.++++
T Consensus       215 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC---CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            356788999999999999999999999988776654444332   22345678999999999999999999999999999


Q ss_pred             CCCCCCCC
Q psy4166          82 HPFLQPLA   89 (249)
Q Consensus        82 ~~~~~~~~   89 (249)
                      |+||....
T Consensus       292 ~~~~~~~~  299 (335)
T 2owb_A          292 DEFFTSGY  299 (335)
T ss_dssp             SHHHHTSC
T ss_pred             CccccCCC
Confidence            99997543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.58  E-value=3.3e-15  Score=120.76  Aligned_cols=76  Identities=22%  Similarity=0.402  Sum_probs=62.4

Q ss_pred             CCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKY-DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y-~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..| +.++|||||||++|||++|+.||.....         ........+..+++++.+||.+||..||.+||++.++++
T Consensus       204 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------TVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------GTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------HHhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            444 7899999999999999999999975322         111122335568999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||..
T Consensus       275 hp~~~~  280 (335)
T 3dls_A          275 DPWVTQ  280 (335)
T ss_dssp             CTTTTC
T ss_pred             CccccC
Confidence            999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.58  E-value=2.8e-15  Score=121.70  Aligned_cols=86  Identities=22%  Similarity=0.321  Sum_probs=66.7

Q ss_pred             CCCc-chhHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHhcccCCCC----------------CCCCCCHHHHHHHHHh
Q psy4166           4 KYDA-KADLYSVGTIVFQCLTGKAPFIANSP-PQLKQYYEKNLVLVPK----------------VPVGTSAELKELLLGL   65 (249)
Q Consensus         4 ~y~~-~~DiwS~G~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~li~~~   65 (249)
                      .|+. ++|||||||++|||++|+.||.+.+. .+....+.......+.                ....++.++.+||.+|
T Consensus       227 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  306 (348)
T 2pml_X          227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLF  306 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHH
Confidence            4666 89999999999999999999988766 4444444332221111                0145889999999999


Q ss_pred             hhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          66 LKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        66 l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      |..||.+||++.++++||||....
T Consensus       307 L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          307 LRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             CCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccCChhhCCCHHHHhcCccccCCC
Confidence            999999999999999999998654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.57  E-value=5.3e-16  Score=125.52  Aligned_cols=87  Identities=25%  Similarity=0.441  Sum_probs=60.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH----HHH-hcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ----YYE-KNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|+|++|+.||.+........    .+. .....+...+..+++++.+||.+||..||.+||++
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  282 (336)
T 3fhr_A          203 PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI  282 (336)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCH
Confidence            3456789999999999999999999998766543311    111 11112222335689999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q psy4166          77 EQLFAHPFLQPL   88 (249)
Q Consensus        77 ~~i~~~~~~~~~   88 (249)
                      .++++||||...
T Consensus       283 ~ell~hp~~~~~  294 (336)
T 3fhr_A          283 TQFMNHPWINQS  294 (336)
T ss_dssp             HHHHHSHHHHTG
T ss_pred             HHHhcCcccccc
Confidence            999999999853

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.57  E-value=2.6e-16  Score=129.03  Aligned_cols=86  Identities=13%  Similarity=0.096  Sum_probs=65.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----Hh--cccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY----EK--NLVLVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      ..|+.++|||||||++|||++|+.||.+..........    ..  ........+..+++++.+||.+||..||.+||++
T Consensus       268 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  347 (371)
T 3q60_A          268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP  347 (371)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred             CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence            56899999999999999999999999877542111000    00  0011112234689999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q psy4166          77 EQLFAHPFLQPL   88 (249)
Q Consensus        77 ~~i~~~~~~~~~   88 (249)
                      .++++||||...
T Consensus       348 ~e~l~hp~f~~~  359 (371)
T 3q60_A          348 LEAMETPEFLQL  359 (371)
T ss_dssp             HHHTTSHHHHHH
T ss_pred             HHHhcCHHHHHH
Confidence            999999999754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.57  E-value=4.6e-15  Score=116.98  Aligned_cols=80  Identities=20%  Similarity=0.192  Sum_probs=62.1

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .|+.++|||||||++|||++|.+|+.....   ...+..  ...+..+..+++++.++|.+||..||.+||++.++++||
T Consensus       207 ~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  281 (289)
T 1x8b_A          207 THLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQ--GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS  281 (289)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHT--TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred             CCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHc--CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence            566799999999999999999887754432   122222  223455677899999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          84 FLQPL   88 (249)
Q Consensus        84 ~~~~~   88 (249)
                      ||...
T Consensus       282 ~~~~~  286 (289)
T 1x8b_A          282 VLLSA  286 (289)
T ss_dssp             TC---
T ss_pred             Hhhhh
Confidence            99854

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.57  E-value=9.9e-16  Score=123.61  Aligned_cols=84  Identities=21%  Similarity=0.235  Sum_probs=65.3

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CCC---------CCCCCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VPK---------VPVGTS   55 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~---------~~~~~~   55 (249)
                      .|+.++||||+||++|||++|+.||.+.+..+....+......                   .+.         ....++
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (331)
T 4aaa_A          201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS  280 (331)
T ss_dssp             TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSC
T ss_pred             CcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchh
Confidence            6889999999999999999999999988775543322111000                   000         012478


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      +++.+||.+||..||.+||++.++++||||+.
T Consensus       281 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          281 EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            99999999999999999999999999999974

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.56  E-value=1.3e-15  Score=121.91  Aligned_cols=80  Identities=25%  Similarity=0.348  Sum_probs=62.3

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .|+.++|||||||++|||++|..||.+....   ..+.. ....+..+..+++++.+||.+||+.||.+||++.++++||
T Consensus       231 ~~~~~~DiwslG~il~el~~g~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  306 (311)
T 3p1a_A          231 SYGTAADVFSLGLTILEVACNMELPHGGEGW---QQLRQ-GYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP  306 (311)
T ss_dssp             CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH---HHHTT-TCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCccHH---HHHhc-cCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence            6889999999999999999997776543221   11111 1122233456899999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          84 FLQP   87 (249)
Q Consensus        84 ~~~~   87 (249)
                      ||++
T Consensus       307 ~~~~  310 (311)
T 3p1a_A          307 VLRQ  310 (311)
T ss_dssp             GGSC
T ss_pred             cccC
Confidence            9974

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.55  E-value=2.1e-15  Score=123.85  Aligned_cols=77  Identities=14%  Similarity=0.192  Sum_probs=59.9

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .|+.++|||||||++|||++|+.||.+.+......   ...    ..+..+++++.+||.+||..||.+||++.++++||
T Consensus       289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~---~~~----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp  361 (377)
T 3byv_A          289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE---WIF----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP  361 (377)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCCC------CCSG---GGG----SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred             cCChhhhHHHHHHHHHHHHHCCCCCcccccccchh---hhh----hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence            68999999999999999999999997655432211   111    12346789999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          84 FLQP   87 (249)
Q Consensus        84 ~~~~   87 (249)
                      ||..
T Consensus       362 ~f~~  365 (377)
T 3byv_A          362 EYEQ  365 (377)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9974

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.54  E-value=8.9e-15  Score=122.33  Aligned_cols=83  Identities=18%  Similarity=0.381  Sum_probs=63.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCC----CCCCHHHHHHHHHhhhhCcccCCCHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVP----VGTSAELKELLLGLLKRNAMDRISFE   77 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~   77 (249)
                      ..|+.++|||||||++|||++ |+.||.+...... ....... ..+..+    ..+++++.+||.+||+.||.+||++.
T Consensus       214 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-~i~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~  291 (434)
T 2rio_A          214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM  291 (434)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH-HHHHTCC-CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             cCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH-HHhcCCC-CcccccccccccchHHHHHHHHHHhhCChhhCCCHH
Confidence            578999999999999999999 9999977655432 2222221 111111    12457899999999999999999999


Q ss_pred             HHhcCCCCCC
Q psy4166          78 QLFAHPFLQP   87 (249)
Q Consensus        78 ~i~~~~~~~~   87 (249)
                      ++++||||..
T Consensus       292 eil~hp~f~~  301 (434)
T 2rio_A          292 KVLRHPLFWP  301 (434)
T ss_dssp             HHHTSGGGSC
T ss_pred             HHHhCCccCC
Confidence            9999999964

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.54  E-value=2.7e-14  Score=114.14  Aligned_cols=79  Identities=19%  Similarity=0.307  Sum_probs=66.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..+....+... ......+..+++++.+||.+||..||.+||++.++++
T Consensus       213 ~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK-CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS-CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            467889999999999999999999999988877665544322 2334567789999999999999999999999999876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.52  E-value=4.8e-15  Score=118.56  Aligned_cols=87  Identities=25%  Similarity=0.426  Sum_probs=69.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..............++ ..+..+++++.++|.+||..||.+||+..+++
T Consensus       193 ~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l  272 (311)
T 3ork_A          193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM  272 (311)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHH
Confidence            45789999999999999999999999998887665444333322221 22346899999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      .|+|+...
T Consensus       273 ~~~l~~~~  280 (311)
T 3ork_A          273 RADLVRVH  280 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998743

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.52  E-value=8.1e-15  Score=117.74  Aligned_cols=76  Identities=22%  Similarity=0.385  Sum_probs=62.1

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPF   84 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~   84 (249)
                      ++.++|||||||++|||++|+.||.....     .. ..   ....+..+++++.+||.+||..||.+||+++++++|+|
T Consensus       226 ~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~-~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~  296 (320)
T 3a99_A          226 HGRSAAVWSLGILLYDMVCGDIPFEHDEE-----II-RG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW  296 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HH-HC---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             CCccchHHhHHHHHHHHHHCCCCCCChhh-----hh-cc---cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence            36789999999999999999999975321     11 11   12335668999999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          85 LQPLA   89 (249)
Q Consensus        85 ~~~~~   89 (249)
                      |....
T Consensus       297 ~~~~~  301 (320)
T 3a99_A          297 MQDVL  301 (320)
T ss_dssp             GSSCC
T ss_pred             hcCcc
Confidence            98654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.52  E-value=2.6e-14  Score=111.87  Aligned_cols=79  Identities=19%  Similarity=0.331  Sum_probs=65.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++||||+||++|+|++|+.||.+.+........... ......+..+++++.+++.+||..||.+||++.+++++
T Consensus       189 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN-KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS-CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC-CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            46889999999999999999999999988776655444332 23344567789999999999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.52  E-value=4.8e-15  Score=119.30  Aligned_cols=85  Identities=19%  Similarity=0.342  Sum_probs=61.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-cCCCC----CCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNL-VLVPK----VPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+...  ....... ...+.    .+..+++++.+||.+||..||.+||++
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  280 (327)
T 3aln_A          203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY  280 (327)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCH
Confidence            3568899999999999999999999998754321  1111111 11111    123588999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q psy4166          77 EQLFAHPFLQPL   88 (249)
Q Consensus        77 ~~i~~~~~~~~~   88 (249)
                      .++++||||...
T Consensus       281 ~ell~hp~~~~~  292 (327)
T 3aln_A          281 KELLKHPFILMY  292 (327)
T ss_dssp             HHHTTSHHHHHH
T ss_pred             HHHHhChHHHHh
Confidence            999999999743

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.52  E-value=2.2e-14  Score=117.33  Aligned_cols=82  Identities=13%  Similarity=0.277  Sum_probs=69.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |..||.+.+..++...+.....  +..+..++..+.+|+.+||+.||.+||++.+++
T Consensus       260 ~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil  337 (367)
T 3l9p_A          260 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR--MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL  337 (367)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            3568999999999999999998 9999999988877766655433  334667899999999999999999999999999


Q ss_pred             cCCCC
Q psy4166          81 AHPFL   85 (249)
Q Consensus        81 ~~~~~   85 (249)
                      ++.++
T Consensus       338 ~~l~~  342 (367)
T 3l9p_A          338 ERIEY  342 (367)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87554

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.52  E-value=8.9e-15  Score=117.73  Aligned_cols=83  Identities=14%  Similarity=0.258  Sum_probs=60.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++||||+||++|||++|..|+...  ........  ....+..+...++++.+||.+||..||.+||++.++++
T Consensus       250 ~~~~~~~~Di~slG~il~el~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          250 GNNYSHKVDIFSLGLILFELLYSFSTQMER--VRIITDVR--NLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--HHHHHHHH--TTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             CCCCcchhhHHHHHHHHHHHHHcCCChhHH--HHHHHHhh--ccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            457899999999999999999987765211  11111111  11122222345678899999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||.++
T Consensus       326 ~~~f~~~  332 (332)
T 3qd2_B          326 NAIFENL  332 (332)
T ss_dssp             STTCCCC
T ss_pred             chhhhcC
Confidence            9999853

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.51  E-value=4.1e-14  Score=112.97  Aligned_cols=81  Identities=19%  Similarity=0.345  Sum_probs=62.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|+.||...................+..+..+++.+.+++.+||..||.+||++.++++
T Consensus       177 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            45789999999999999999999999986544332222222223334456678999999999999999999999999877


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       257 ~  257 (307)
T 2eva_A          257 I  257 (307)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.51  E-value=1.1e-14  Score=114.92  Aligned_cols=107  Identities=10%  Similarity=0.094  Sum_probs=82.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc------------------chhcHHHHHHHHHHhhhcCCCCeeeeeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA------------------KTQNFGKEINILKELTELHHENVVELLH  183 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~~~~~~~~~h~niv~l~~  183 (249)
                      ..+|.|.+|.||.+.. .+++.||+|.++.....                  ....+.+|+.+++.+.   |   +++++
T Consensus        96 ~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~---~~v~~  168 (282)
T 1zar_A           96 KLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G---LAVPK  168 (282)
T ss_dssp             EEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T---SSSCC
T ss_pred             CEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C---CCcCe
Confidence            5678899999999988 78999999999643211                  1234778999998875   3   44555


Q ss_pred             eEEeCCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         184 CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       184 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ++.. +..|+||||++||+|.+ +.    .  ..+..++.|++.|+.|||       |+||+|||+.
T Consensus       169 ~~~~-~~~~lvmE~~~g~~L~~-l~----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~  227 (282)
T 1zar_A          169 VYAW-EGNAVLMELIDAKELYR-VR----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS  227 (282)
T ss_dssp             EEEE-ETTEEEEECCCCEEGGG-CC----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             EEec-cceEEEEEecCCCcHHH-cc----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE
Confidence            4443 45699999999999987 42    2  335579999999999999       9999999997

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.51  E-value=3.7e-14  Score=110.97  Aligned_cols=78  Identities=19%  Similarity=0.400  Sum_probs=66.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |+.||.+.+..+....+....  .+..+...++++.+++.+||..||.+||++.++++
T Consensus       182 ~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  259 (269)
T 4hcu_A          182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF--RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR  259 (269)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc--cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            568899999999999999999 999999988877766554432  23345668999999999999999999999999886


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       260 ~  260 (269)
T 4hcu_A          260 Q  260 (269)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.50  E-value=3.8e-14  Score=116.11  Aligned_cols=79  Identities=19%  Similarity=0.344  Sum_probs=66.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |..||.+.+..++...+....  .+..+..++.++.++|.+||..||.+||++.+++
T Consensus       279 ~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell  356 (370)
T 2psq_A          279 DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH--RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV  356 (370)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            4678999999999999999999 999999888777665554433  3345677899999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       357 ~~  358 (370)
T 2psq_A          357 ED  358 (370)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.50  E-value=4.5e-14  Score=110.37  Aligned_cols=75  Identities=20%  Similarity=0.369  Sum_probs=61.8

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           6 DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         6 ~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.++|||||||++|||++|+.||.+.+........... ...+..+..+++++.+++.+||..||.+||++.++++
T Consensus       189 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          189 RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE-GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS-CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            34799999999999999999999988877664443332 2334557789999999999999999999999999875

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.50  E-value=2.5e-15  Score=124.91  Aligned_cols=77  Identities=14%  Similarity=0.190  Sum_probs=62.8

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      .|+.++|||||||++|||++|+.||.+.+.......   ..    .....+++++.+||.+||..||.+||++.++++|+
T Consensus       293 ~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~---~~----~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~  365 (413)
T 3dzo_A          293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW---IF----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP  365 (413)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG---GG----SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH---HH----hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence            477899999999999999999999987655332111   11    11235789999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          84 FLQP   87 (249)
Q Consensus        84 ~~~~   87 (249)
                      ||..
T Consensus       366 ~~~~  369 (413)
T 3dzo_A          366 EYEQ  369 (413)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9974

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.50  E-value=3e-14  Score=114.71  Aligned_cols=79  Identities=19%  Similarity=0.306  Sum_probs=66.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |+.||.+.+...+...+.....  ...+..++.++.+++.+||+.||.+||++.+++
T Consensus       193 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell  270 (327)
T 3poz_A          193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELI  270 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHH
T ss_pred             cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            3568999999999999999999 9999998888777666654432  234567899999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      .+
T Consensus       271 ~~  272 (327)
T 3poz_A          271 IE  272 (327)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.49  E-value=4.4e-14  Score=111.22  Aligned_cols=78  Identities=19%  Similarity=0.266  Sum_probs=64.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||...........+.....  ...+..+++.+.+++.+||..||.+||++.++++
T Consensus       189 ~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  266 (281)
T 3cc6_A          189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR--LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC  266 (281)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            568899999999999999998 9999988777666555544332  2345668999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       267 ~  267 (281)
T 3cc6_A          267 S  267 (281)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.49  E-value=4.6e-14  Score=113.70  Aligned_cols=79  Identities=19%  Similarity=0.289  Sum_probs=66.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |+.||.+.+..++...+.....  ...+..++.++.++|.+||..||.+||++.+++
T Consensus       193 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  270 (327)
T 3lzb_A          193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER--LPQPPICTIDVYMIMRKCWMIDADSRPKFRELI  270 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            3568999999999999999999 9999999888777666654432  234667899999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      +.
T Consensus       271 ~~  272 (327)
T 3lzb_A          271 IE  272 (327)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.49  E-value=2.8e-14  Score=114.06  Aligned_cols=75  Identities=23%  Similarity=0.403  Sum_probs=60.5

Q ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCC
Q psy4166           6 DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFL   85 (249)
Q Consensus         6 ~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~   85 (249)
                      +.++|||||||++|||++|+.||.+...     ....    ....+..++.++.++|.+||..||.+||++.++++|+||
T Consensus       217 ~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~  287 (312)
T 2iwi_A          217 ALPATVWSLGILLYDMVCGDIPFERDQE-----ILEA----ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM  287 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HHHT----CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTT
T ss_pred             CccchHHHHHHHHHHHHHCCCCCCChHH-----Hhhh----ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence            3489999999999999999999965321     1111    223456789999999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          86 QPLA   89 (249)
Q Consensus        86 ~~~~   89 (249)
                      ....
T Consensus       288 ~~~~  291 (312)
T 2iwi_A          288 QTPA  291 (312)
T ss_dssp             CC--
T ss_pred             cCch
Confidence            8654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.49  E-value=6.1e-14  Score=117.92  Aligned_cols=77  Identities=22%  Similarity=0.424  Sum_probs=66.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+.....  ...|..+++++.++|.+||..||.+||++.+++.
T Consensus       360 ~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR--MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            568999999999999999999 9999999888877766655433  2346678999999999999999999999998865

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.49  E-value=3.4e-14  Score=116.66  Aligned_cols=77  Identities=19%  Similarity=0.355  Sum_probs=65.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+..++...+.....  ...|..+++++.++|.+||..||.+||++.++++
T Consensus       290 ~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR--LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            457889999999999999998 9999999888877766655433  3446678999999999999999999999998865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.49  E-value=4.6e-14  Score=111.13  Aligned_cols=78  Identities=18%  Similarity=0.282  Sum_probs=64.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+..+....+....  ....+..+++++.+++.+||..||.+||++.++++
T Consensus       192 ~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE--RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            568899999999999999997 999999887776655554433  23456678999999999999999999999999875


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       270 ~  270 (281)
T 1mp8_A          270 Q  270 (281)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.49  E-value=4.9e-14  Score=111.28  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=62.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++||||+||++|||++|+.||.+.+....  .... ......+..+..+++++.++|.+||..||.+||++.+++
T Consensus       203 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  281 (287)
T 4f0f_A          203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI-REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV  281 (287)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH-HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH-hccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHH
Confidence            4578899999999999999999999987655443  2222 223334456778999999999999999999999999987


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       282 ~  282 (287)
T 4f0f_A          282 K  282 (287)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.48  E-value=4e-14  Score=111.86  Aligned_cols=78  Identities=21%  Similarity=0.366  Sum_probs=66.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..+....+....  .+..+..+++++.++|.+||..||.+||++.++++
T Consensus       188 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  265 (287)
T 1u59_A          188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK--RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  265 (287)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCC--cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            457889999999999999998 999999888777666554433  23456778999999999999999999999999987


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       266 ~  266 (287)
T 1u59_A          266 R  266 (287)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.48  E-value=4e-14  Score=110.68  Aligned_cols=78  Identities=18%  Similarity=0.357  Sum_probs=64.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |+.||.+.+.......+.....  ...+...++.+.+++.+||..||.+||++.++++
T Consensus       180 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  257 (268)
T 3sxs_A          180 FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR--LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLS  257 (268)
T ss_dssp             SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC--CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            357889999999999999999 9999998888776555544332  2345668999999999999999999999999987


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       258 ~  258 (268)
T 3sxs_A          258 S  258 (268)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.48  E-value=4.1e-14  Score=113.87  Aligned_cols=82  Identities=13%  Similarity=0.267  Sum_probs=68.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..+....+.....  +..+..++..+.++|.+||..||.+||++.++++
T Consensus       220 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  297 (327)
T 2yfx_A          220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR--MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE  297 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            568899999999999999998 9999998888776665544332  3346678999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      +.++.
T Consensus       298 ~l~~~  302 (327)
T 2yfx_A          298 RIEYC  302 (327)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            86653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.48  E-value=6.7e-14  Score=110.26  Aligned_cols=78  Identities=18%  Similarity=0.368  Sum_probs=65.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |+.||.+.+.......+.....  ...+...++.+.+++.+||..||.+||++.++++
T Consensus       196 ~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  273 (283)
T 3gen_A          196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR--LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS  273 (283)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC--CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            568899999999999999998 9999998888776665554432  2345668899999999999999999999999887


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       274 ~  274 (283)
T 3gen_A          274 N  274 (283)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.48  E-value=7.9e-14  Score=108.83  Aligned_cols=78  Identities=19%  Similarity=0.400  Sum_probs=65.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |+.||.+.+..+....+.....  ...+...+.++.+++.+||..||.+||++.++++
T Consensus       180 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  257 (267)
T 3t9t_A          180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR  257 (267)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc--CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            568889999999999999999 9999998888776655544322  2345668999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       258 ~  258 (267)
T 3t9t_A          258 Q  258 (267)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.48  E-value=8.6e-14  Score=114.45  Aligned_cols=79  Identities=19%  Similarity=0.341  Sum_probs=67.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |..||.+.+..++...+....  .+..+..+++++.+||.+||..||.+||++.+++
T Consensus       267 ~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  344 (382)
T 3tt0_A          267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH--RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV  344 (382)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC--CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            4578999999999999999999 999999988877766665443  2344667899999999999999999999999988


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       345 ~~  346 (382)
T 3tt0_A          345 ED  346 (382)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.48  E-value=6.6e-14  Score=112.67  Aligned_cols=77  Identities=19%  Similarity=0.452  Sum_probs=65.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+...+...+....  ....+..+++++.++|.+||..||.+||++.++++
T Consensus       229 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          229 RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY--RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            467889999999999999999 999999988877766655443  23446678999999999999999999999998875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.47  E-value=8.4e-14  Score=116.96  Aligned_cols=78  Identities=21%  Similarity=0.365  Sum_probs=65.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |+.||.+.+..++...+....  ....|..+++++.++|.+||..||.+||++.+++
T Consensus       360 ~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~--~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~  437 (450)
T 1k9a_A          360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLR  437 (450)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            4578999999999999999998 999999887776666555443  2345677999999999999999999999998886


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      .
T Consensus       438 ~  438 (450)
T 1k9a_A          438 E  438 (450)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.47  E-value=5e-14  Score=112.57  Aligned_cols=78  Identities=22%  Similarity=0.385  Sum_probs=65.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |..||.+.+...+...+....  .+..+..+++++.+++.+||..||.+||++.++++
T Consensus       227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~  304 (314)
T 2ivs_A          227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH--RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK  304 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC--cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            457889999999999999999 999999888777665554433  33456678999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       305 ~  305 (314)
T 2ivs_A          305 D  305 (314)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.47  E-value=1e-13  Score=109.98  Aligned_cols=82  Identities=20%  Similarity=0.325  Sum_probs=61.3

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhc-ccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANS-PPQLKQYYEKN-LVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .|+.++||||+||++|||++   ||.... .......+... ...++..+...+..+.++|.+||..||.+||++.++++
T Consensus       207 ~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          207 HYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            68899999999999999998   554322 22222223222 22233345567788999999999999999999999999


Q ss_pred             CCCCCCC
Q psy4166          82 HPFLQPL   88 (249)
Q Consensus        82 ~~~~~~~   88 (249)
                      ||||...
T Consensus       284 h~~~~~~  290 (303)
T 1zy4_A          284 SGWLPVK  290 (303)
T ss_dssp             SSCSCCC
T ss_pred             CCCcCCC
Confidence            9999753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.47  E-value=8.7e-14  Score=111.23  Aligned_cols=79  Identities=22%  Similarity=0.384  Sum_probs=65.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |..||.+.+.......+....  .+..+..+++++.++|.+||..||.+||++.+++
T Consensus       223 ~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  300 (313)
T 3brb_A          223 DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH--RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLR  300 (313)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             CCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC--CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            4568899999999999999999 999999887776655544433  3344667899999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      .+
T Consensus       301 ~~  302 (313)
T 3brb_A          301 LQ  302 (313)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.47  E-value=1.1e-13  Score=116.20  Aligned_cols=82  Identities=20%  Similarity=0.372  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+.....  ...+..+++.+.++|.+||..||.+||++++++.
T Consensus       356 ~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            568999999999999999999 9999999888777666654432  3346678999999999999999999999999876


Q ss_pred             C--CCCC
Q psy4166          82 H--PFLQ   86 (249)
Q Consensus        82 ~--~~~~   86 (249)
                      .  .++.
T Consensus       434 ~L~~~~~  440 (452)
T 1fmk_A          434 FLEDYFT  440 (452)
T ss_dssp             HHHTTTS
T ss_pred             HHHHHhc
Confidence            3  4544

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.47  E-value=8e-14  Score=110.32  Aligned_cols=77  Identities=19%  Similarity=0.387  Sum_probs=64.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+....  .+..+..+++++.++|.+||..||.+||++.++++
T Consensus       195 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE--RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            356779999999999999999 999999988877766555433  33456678999999999999999999999998865

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.46  E-value=1.6e-13  Score=108.50  Aligned_cols=80  Identities=23%  Similarity=0.431  Sum_probs=61.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCC--CCCCCCCCHHHHHHHHHhhhhCcccCCCHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLV--PKVPVGTSAELKELLLGLLKRNAMDRISFEQ   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~   78 (249)
                      +..|+.++|||||||++|||++|+.||.+..... +...+.......  ...+..+++++.+||.+||..||.+||++.+
T Consensus       199 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~e  278 (289)
T 3og7_A          199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPR  278 (289)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHH
Confidence            4568889999999999999999999998765443 333333322211  2234568899999999999999999999999


Q ss_pred             Hhc
Q psy4166          79 LFA   81 (249)
Q Consensus        79 i~~   81 (249)
                      +++
T Consensus       279 ll~  281 (289)
T 3og7_A          279 ILA  281 (289)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.46  E-value=1.2e-13  Score=111.80  Aligned_cols=78  Identities=18%  Similarity=0.351  Sum_probs=66.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+..++...+.....  +..+..+++++.+++.+||..||.+||++.++++
T Consensus       251 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          251 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI--LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCc--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            568899999999999999999 9999999888777665544332  3446678999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       329 ~  329 (343)
T 1luf_A          329 I  329 (343)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.46  E-value=1.5e-14  Score=114.56  Aligned_cols=80  Identities=16%  Similarity=0.171  Sum_probs=58.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP----QLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..    ............+ ......+++++.+++.+||..||.+||++
T Consensus       189 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  268 (296)
T 4hgt_A          189 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCH
T ss_pred             CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCH
Confidence            457889999999999999999999999875432    1111111111111 11225678999999999999999999999


Q ss_pred             HHHhc
Q psy4166          77 EQLFA   81 (249)
Q Consensus        77 ~~i~~   81 (249)
                      .++++
T Consensus       269 ~~l~~  273 (296)
T 4hgt_A          269 SYLRQ  273 (296)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88865

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.46  E-value=6.1e-14  Score=112.86  Aligned_cols=78  Identities=18%  Similarity=0.405  Sum_probs=64.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+...  ..+..+..+++++.++|.+||..||.+||++.++++
T Consensus       216 ~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  293 (327)
T 1fvr_A          216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  293 (327)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT--CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC--CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            457889999999999999998 99999988877665544332  223446678999999999999999999999999887


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       294 ~  294 (327)
T 1fvr_A          294 S  294 (327)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.46  E-value=7.7e-14  Score=111.45  Aligned_cols=80  Identities=19%  Similarity=0.376  Sum_probs=60.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-CHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-SFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.......+..........+..+++++.++|.+||..||.+|| ++++++
T Consensus       209 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~  288 (309)
T 2h34_A          209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLS  288 (309)
T ss_dssp             C----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             CCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHH
Confidence            4567889999999999999999999998877665544444333333344567889999999999999999999 788876


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      .
T Consensus       289 ~  289 (309)
T 2h34_A          289 A  289 (309)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.46  E-value=4.3e-14  Score=113.73  Aligned_cols=78  Identities=19%  Similarity=0.292  Sum_probs=65.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+....++...+.....  ...+..++.++.+++.+||..||.+||++.++++
T Consensus       192 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~  269 (325)
T 3kex_A          192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER--LAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN  269 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB--CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHH
T ss_pred             CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC--CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            568899999999999999999 9999998887777666554432  2335567889999999999999999999999987


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       270 ~  270 (325)
T 3kex_A          270 E  270 (325)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.46  E-value=1.8e-14  Score=114.15  Aligned_cols=80  Identities=18%  Similarity=0.176  Sum_probs=58.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---H-HHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP---Q-LKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~---~-~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+..   + ...........+ +..+..+++++.+++.+||..||.+||++
T Consensus       189 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  268 (296)
T 3uzp_A          189 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCH
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCH
Confidence            456889999999999999999999999864331   1 112111111111 11235688999999999999999999999


Q ss_pred             HHHhc
Q psy4166          77 EQLFA   81 (249)
Q Consensus        77 ~~i~~   81 (249)
                      .++++
T Consensus       269 ~~l~~  273 (296)
T 3uzp_A          269 SYLRQ  273 (296)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88865

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.45  E-value=1.4e-13  Score=110.38  Aligned_cols=78  Identities=19%  Similarity=0.265  Sum_probs=65.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |..||.+.+..+....+....  .+..+..++..+.++|.+||..||.+||++.++++
T Consensus       215 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~  292 (322)
T 1p4o_A          215 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  292 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC--cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            568899999999999999999 899999888877665554432  23446678999999999999999999999999987


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       293 ~  293 (322)
T 1p4o_A          293 S  293 (322)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.45  E-value=9.1e-14  Score=113.19  Aligned_cols=78  Identities=18%  Similarity=0.379  Sum_probs=63.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++ |+.||.+..... +...+....  ....+..+++++.+++.+||..||.+||++.+++
T Consensus       270 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  347 (359)
T 3vhe_A          270 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV  347 (359)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            568999999999999999998 999998876433 333333322  3344667899999999999999999999999998


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      +|
T Consensus       348 ~~  349 (359)
T 3vhe_A          348 EH  349 (359)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.45  E-value=1.4e-13  Score=108.13  Aligned_cols=77  Identities=23%  Similarity=0.363  Sum_probs=63.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||...+..+....+....  .+..+..+++.+.++|.+||..||.+||++.++++
T Consensus       189 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          189 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            468899999999999999998 999998887766655443332  33456678999999999999999999999998865

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.45  E-value=1.8e-13  Score=107.98  Aligned_cols=77  Identities=25%  Similarity=0.441  Sum_probs=65.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|+|++ |..||.+.+.......+....  ....+..+++++.+|+.+||..||.+||++.++++
T Consensus       187 ~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccC--CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            568899999999999999999 999999888777666554433  23446678999999999999999999999999865

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=2.7e-13  Score=109.46  Aligned_cols=79  Identities=15%  Similarity=0.376  Sum_probs=65.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |+.||.+.+..++...+.....  ...+..++.++.+++.+||..||.+||++.+++
T Consensus       224 ~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  301 (333)
T 1mqb_A          224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIV  301 (333)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             cCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            4578899999999999999999 9999998888776665544332  234567899999999999999999999999887


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       302 ~~  303 (333)
T 1mqb_A          302 SI  303 (333)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.45  E-value=1.7e-13  Score=112.36  Aligned_cols=77  Identities=22%  Similarity=0.475  Sum_probs=63.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+......  ..+..++.++.+++.+||..||.+||++.++++
T Consensus       225 ~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC--CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            568899999999999999998 99999998887776665544333  235568899999999999999999999988865

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.45  E-value=1.6e-13  Score=107.79  Aligned_cols=77  Identities=25%  Similarity=0.384  Sum_probs=64.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..+....+....  ....+..+++++.+++.+||..||.+||++.++++
T Consensus       185 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhccc--CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            457789999999999999999 999999988877666554432  23345678999999999999999999999998865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.44  E-value=4.3e-14  Score=112.54  Aligned_cols=77  Identities=12%  Similarity=0.160  Sum_probs=53.0

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCC---------------HHHHHHHHHhcccCCCCCCCC-----CCHHHHHHHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANS---------------PPQLKQYYEKNLVLVPKVPVG-----TSAELKELLL   63 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~---------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~   63 (249)
                      .|+.++|||||||++|||+||.+||....               ..++...+ ......|..|..     .+..+.+|+.
T Consensus       194 ~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~rp~~p~~~~~~~~~~~l~~li~  272 (303)
T 3hmm_A          194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV-CEQKLRPNIPNRWQSCEALRVMAKIMR  272 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH-TTSCCCCCCCGGGGSSHHHHHHHHHHH
T ss_pred             ccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHH-hcccCCCCCCccccchHHHHHHHHHHH
Confidence            46789999999999999999987663221               12222222 112223333322     2346889999


Q ss_pred             HhhhhCcccCCCHHHHhc
Q psy4166          64 GLLKRNAMDRISFEQLFA   81 (249)
Q Consensus        64 ~~l~~~p~~R~~~~~i~~   81 (249)
                      +||+.||.+|||+.++++
T Consensus       273 ~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          273 ECWYANGAARLTALRIKK  290 (303)
T ss_dssp             TTCCSSGGGSCCHHHHHH
T ss_pred             HHcccCHhHCcCHHHHHH
Confidence            999999999999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.44  E-value=2.1e-13  Score=109.23  Aligned_cols=79  Identities=16%  Similarity=0.315  Sum_probs=64.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++|||||||++|||++|+.||.+.+.......+...... ...+..++.++.+++.+||..||.+||++.++++.
T Consensus       218 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          218 LPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP-NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC-CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC-CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            45889999999999999999999999988877665554443322 22234578899999999999999999999998874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.44  E-value=3e-14  Score=114.31  Aligned_cols=82  Identities=23%  Similarity=0.340  Sum_probs=58.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhcccC----------------------CCCCCCCCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP----PQLKQYYEKNLVL----------------------VPKVPVGTS   55 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~----------------------~~~~~~~~~   55 (249)
                      +..|+.++|||||||++|||++|+.||.....    .+....+....+.                      ....+..++
T Consensus       197 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (319)
T 4euu_A          197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQ  276 (319)
T ss_dssp             CCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHH
Confidence            46789999999999999999999999975332    2222222221110                      001112245


Q ss_pred             HHHHHHHHHhhhhCcccCCCHHHHhcCC
Q psy4166          56 AELKELLLGLLKRNAMDRISFEQLFAHP   83 (249)
Q Consensus        56 ~~~~~li~~~l~~~p~~R~~~~~i~~~~   83 (249)
                      ..+.+||.+||+.||.+||+++++++|+
T Consensus       277 ~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          277 VLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            6788999999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=1.6e-13  Score=111.17  Aligned_cols=78  Identities=17%  Similarity=0.274  Sum_probs=63.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHH-HHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++ |..||.+...... ...+...  ..+..+..+++++.++|.+||..||.+||++.+++
T Consensus       249 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  326 (344)
T 1rjb_A          249 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG--FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT  326 (344)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            568999999999999999998 9999988765433 3333332  23344667899999999999999999999999998


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       327 ~~  328 (344)
T 1rjb_A          327 SF  328 (344)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.44  E-value=1.6e-13  Score=108.82  Aligned_cols=80  Identities=13%  Similarity=0.132  Sum_probs=59.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhc-c-cCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP---PQLKQYYEKN-L-VLVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+.   ......+... . ...+.....+++++.+++.+||..||.+||++
T Consensus       192 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~  271 (298)
T 1csn_A          192 GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDY  271 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCH
T ss_pred             CCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCH
Confidence            45789999999999999999999999987532   2222222111 1 11112234688999999999999999999999


Q ss_pred             HHHhc
Q psy4166          77 EQLFA   81 (249)
Q Consensus        77 ~~i~~   81 (249)
                      .++++
T Consensus       272 ~~l~~  276 (298)
T 1csn_A          272 DYLQG  276 (298)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88865

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.44  E-value=1.6e-13  Score=110.82  Aligned_cols=78  Identities=19%  Similarity=0.346  Sum_probs=65.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+..++...+....  .+..+..++.++.++|.+||..||.+||++.++++
T Consensus       234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  311 (334)
T 2pvf_A          234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH--RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  311 (334)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            457889999999999999999 999999988877766555443  23446678999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       312 ~  312 (334)
T 2pvf_A          312 D  312 (334)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.44  E-value=1.8e-13  Score=108.11  Aligned_cols=79  Identities=16%  Similarity=0.291  Sum_probs=65.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..+....+..... ....+..++.++.+++.+||..||.+||++.++++
T Consensus       199 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCC-CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            346789999999999999999 9999999888776655544322 23345678999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       278 ~  278 (291)
T 1u46_A          278 F  278 (291)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=1.2e-13  Score=113.14  Aligned_cols=78  Identities=23%  Similarity=0.362  Sum_probs=63.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |.+||.+.+..+....+....  ....|..++.++.+++.+||..||.+||++.++++
T Consensus       271 ~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~--~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  348 (373)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            568999999999999999999 788998776655554444333  23346678999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       349 ~  349 (373)
T 3c1x_A          349 R  349 (373)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=3.2e-13  Score=107.01  Aligned_cols=78  Identities=19%  Similarity=0.382  Sum_probs=62.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|+|++ |.+||...+.......+.....  ...+..+++.+.+++.+||..||.+||++.+++
T Consensus       202 ~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll  279 (298)
T 3pls_A          202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR--LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLV  279 (298)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC--CCCCccchHHHHHHHHHHccCChhhCcCHHHHH
Confidence            4578999999999999999999 5666776666666555544332  334667899999999999999999999998886


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       280 ~  280 (298)
T 3pls_A          280 G  280 (298)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.43  E-value=2.3e-13  Score=118.46  Aligned_cols=77  Identities=21%  Similarity=0.368  Sum_probs=66.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+.....  ...|..+++++.++|.+||..||.+||++.++++
T Consensus       514 ~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            578999999999999999998 9999999888777766655432  3456779999999999999999999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.43  E-value=2.7e-13  Score=118.32  Aligned_cols=77  Identities=19%  Similarity=0.387  Sum_probs=67.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..++...+.....  ...+..+++++.++|.+||..||.+||++.++++
T Consensus       547 ~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER--MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            478999999999999999998 9999999998887776665443  3456779999999999999999999999998865

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.43  E-value=1.6e-13  Score=116.57  Aligned_cols=78  Identities=24%  Similarity=0.432  Sum_probs=65.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+..++...+.....  ...+..+++++.+||.+||+.||.+||++.++++
T Consensus       394 ~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            457889999999999999999 9999999888777666554432  3446778999999999999999999999999876


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      .
T Consensus       472 ~  472 (495)
T 1opk_A          472 A  472 (495)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.43  E-value=2.2e-13  Score=110.82  Aligned_cols=80  Identities=15%  Similarity=0.154  Sum_probs=59.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHhcccCCCCCC------CCCCHHHHHHHHHhhhhCcccC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANS--PPQLKQYYEKNLVLVPKVP------VGTSAELKELLLGLLKRNAMDR   73 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~R   73 (249)
                      +..|+.++|||||||++|||++|+.||.+..  ...+..............+      ..+++++.+||.+||..||.+|
T Consensus       242 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  321 (352)
T 2jii_A          242 GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEK  321 (352)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhC
Confidence            4578999999999999999999999998764  3333332222111111111      2468999999999999999999


Q ss_pred             CCHHHHhc
Q psy4166          74 ISFEQLFA   81 (249)
Q Consensus        74 ~~~~~i~~   81 (249)
                      |++.++++
T Consensus       322 ps~~~l~~  329 (352)
T 2jii_A          322 PPYAMLRN  329 (352)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99988865

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.42  E-value=3.1e-13  Score=115.85  Aligned_cols=82  Identities=20%  Similarity=0.372  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+....++...+.....  ...+..++.++.+||.+||..||++||++++++.
T Consensus       439 ~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            468899999999999999999 9999999888777666655433  2346678999999999999999999999999876


Q ss_pred             C--CCCC
Q psy4166          82 H--PFLQ   86 (249)
Q Consensus        82 ~--~~~~   86 (249)
                      .  .++.
T Consensus       517 ~L~~~~~  523 (535)
T 2h8h_A          517 FLEDYFT  523 (535)
T ss_dssp             HHHTSSC
T ss_pred             HHHHHhh
Confidence            4  4444

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.42  E-value=3.2e-13  Score=107.95  Aligned_cols=78  Identities=18%  Similarity=0.379  Sum_probs=62.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHH-HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++ |..||.+.... .....+....  ....+..+++++.+++.+||..||.+||++.+++
T Consensus       225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  302 (316)
T 2xir_A          225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV  302 (316)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCc--cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            568899999999999999998 99999876543 3333333322  2344566899999999999999999999999998


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      +|
T Consensus       303 ~~  304 (316)
T 2xir_A          303 EH  304 (316)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.41  E-value=3.4e-13  Score=107.62  Aligned_cols=78  Identities=15%  Similarity=0.347  Sum_probs=61.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++ |+.||.+..... .........  ....+..++.++.+++.+||..||.+||++.+++
T Consensus       222 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  299 (313)
T 1t46_A          222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV  299 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCC--CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            468899999999999999999 999998776533 333333322  2233567899999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       300 ~~  301 (313)
T 1t46_A          300 QL  301 (313)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.41  E-value=3.9e-13  Score=106.62  Aligned_cols=77  Identities=23%  Similarity=0.364  Sum_probs=62.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++ |.+||.+.+.......+....  ....+..++.++.+++.+||..||.+||++.++++
T Consensus       207 ~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            568899999999999999999 778887776665554444333  22345668999999999999999999999998875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.41  E-value=5.2e-13  Score=106.57  Aligned_cols=80  Identities=19%  Similarity=0.279  Sum_probs=59.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSP--PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++|||||||++|+|++|+.||.+...  ......+.... ..+..+..+++++.++|.+||..||.+||++.++
T Consensus       210 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~i  288 (310)
T 2wqm_A          210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD-YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV  288 (310)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC-SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc-CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            45688999999999999999999999976533  22333332221 2222235689999999999999999999999998


Q ss_pred             hcC
Q psy4166          80 FAH   82 (249)
Q Consensus        80 ~~~   82 (249)
                      +++
T Consensus       289 l~~  291 (310)
T 2wqm_A          289 YDV  291 (310)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.40  E-value=4.2e-13  Score=108.82  Aligned_cols=81  Identities=16%  Similarity=0.257  Sum_probs=58.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhcccCCCC------CCCCCCHHHHHHHHHhhhhCcccC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIAN--SPPQLKQYYEKNLVLVPK------VPVGTSAELKELLLGLLKRNAMDR   73 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~R   73 (249)
                      +..|+.++|||||||++|||++|+.||.+.  +...............+.      ....+++++.++|.+||..||.+|
T Consensus       234 ~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  313 (345)
T 2v62_A          234 GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEK  313 (345)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccC
Confidence            456899999999999999999999999653  322222222111111110      012688999999999999999999


Q ss_pred             CCHHHHhcC
Q psy4166          74 ISFEQLFAH   82 (249)
Q Consensus        74 ~~~~~i~~~   82 (249)
                      |+++++++.
T Consensus       314 ps~~~l~~~  322 (345)
T 2v62_A          314 PNYQALKKI  322 (345)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999998764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.39  E-value=4.8e-13  Score=107.81  Aligned_cols=78  Identities=13%  Similarity=0.264  Sum_probs=61.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHH-HHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++ |..||.+...... ........  ....+...++++.+++.+||..||.+||++.+++
T Consensus       241 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~  318 (333)
T 2i1m_A          241 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY--QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC  318 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence            468899999999999999999 9999987655433 33333322  2334566889999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       319 ~~  320 (333)
T 2i1m_A          319 SF  320 (333)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.39  E-value=7.4e-13  Score=105.00  Aligned_cols=79  Identities=18%  Similarity=0.348  Sum_probs=59.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC--CCCCCCCCHHHHHHHHHhhhhCcccCCC-HHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV--PKVPVGTSAELKELLLGLLKRNAMDRIS-FEQ   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~-~~~   78 (249)
                      +..|+.++||||+||++|||++|+.||.+.+...............  ...+..+++.+.++|.+||..||.+||+ +++
T Consensus       186 ~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~  265 (294)
T 4eqm_A          186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQE  265 (294)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHH
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHH
Confidence            4578899999999999999999999999887765433222221111  1234568999999999999999999994 554


Q ss_pred             Hh
Q psy4166          79 LF   80 (249)
Q Consensus        79 i~   80 (249)
                      +.
T Consensus       266 l~  267 (294)
T 4eqm_A          266 MK  267 (294)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.38  E-value=6.2e-13  Score=105.37  Aligned_cols=77  Identities=18%  Similarity=0.243  Sum_probs=58.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP----------------QLKQYYEKNLVLVPKVPVGTSAELKELLLGLL   66 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   66 (249)
                      ..|+.++|||||||++|||++|..||......                .....+..  ......+..+++++.++|.+||
T Consensus       192 ~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l  269 (295)
T 3ugc_A          192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN--NGRLPRPDGCPDEIYMIMTECW  269 (295)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHS
T ss_pred             CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc--cCcCCCCcCcCHHHHHHHHHHc
Confidence            56899999999999999999999998653221                11111111  2233446678999999999999


Q ss_pred             hhCcccCCCHHHHhc
Q psy4166          67 KRNAMDRISFEQLFA   81 (249)
Q Consensus        67 ~~~p~~R~~~~~i~~   81 (249)
                      ..||.+||++.++++
T Consensus       270 ~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          270 NNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCCCHHHHHH
Confidence            999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.38  E-value=1.1e-12  Score=114.91  Aligned_cols=77  Identities=18%  Similarity=0.280  Sum_probs=65.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |..||.+.+..+....+.....  +..+..+++.+.++|.+||..||.+||++.++++
T Consensus       567 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC--CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            578999999999999999997 9999999888777665554432  3456678999999999999999999999999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.37  E-value=1.3e-13  Score=111.05  Aligned_cols=79  Identities=14%  Similarity=0.160  Sum_probs=56.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHhccc-CCCC-CCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL---KQYYEKNLV-LVPK-VPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~---~~~~~~~~~-~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+.+....   ...+..... .+.. ....++ ++.+++..||..||.+||++
T Consensus       191 ~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~  269 (330)
T 2izr_A          191 GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDY  269 (330)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCH
T ss_pred             CCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCH
Confidence            46789999999999999999999999987544322   222211111 1111 112244 99999999999999999998


Q ss_pred             HHHhc
Q psy4166          77 EQLFA   81 (249)
Q Consensus        77 ~~i~~   81 (249)
                      .++.+
T Consensus       270 ~~l~~  274 (330)
T 2izr_A          270 DYLRK  274 (330)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88755

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.37  E-value=4.8e-13  Score=105.61  Aligned_cols=76  Identities=24%  Similarity=0.403  Sum_probs=59.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |.+||..............    ....+...++++.+++.+||+.||.+||++.++++
T Consensus       193 ~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  268 (289)
T 4fvq_A          193 KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR  268 (289)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT----TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc----cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            468899999999999999999 5566666555544443332    22334556788999999999999999999999988


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       269 ~  269 (289)
T 4fvq_A          269 D  269 (289)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.36  E-value=4.4e-13  Score=108.00  Aligned_cols=76  Identities=14%  Similarity=0.271  Sum_probs=54.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|+.||.+.......   .....  ...+...+..+.+||.+||+.||.+||++.++++
T Consensus       227 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  301 (337)
T 3ll6_A          227 NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV---NGKYS--IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVH  301 (337)
T ss_dssp             TSCSSHHHHHHHHHHHHHHHHHSSCCC---------------CC--CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh---cCccc--CCcccccchHHHHHHHHHccCChhhCcCHHHHHH
Confidence            456788999999999999999999999765443221   12111  1224456788999999999999999999999988


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       302 ~  302 (337)
T 3ll6_A          302 Q  302 (337)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.36  E-value=1.8e-13  Score=109.57  Aligned_cols=76  Identities=17%  Similarity=0.296  Sum_probs=56.6

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSP--PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      |+.++|||||||++|||++|+.||.....  .........  ......+..++.++.++|.+||..||.+||++.+++++
T Consensus       223 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN--QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             ECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            68899999999999999999999953211  111222222  12222345688999999999999999999999999886

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.35  E-value=5.9e-14  Score=110.96  Aligned_cols=79  Identities=9%  Similarity=0.085  Sum_probs=57.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLK----QYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQ   78 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~   78 (249)
                      .+|+.++|||||||++|||++|+.||.+.+.....    .............+..+++++.++|.+||+.||.+| ++.+
T Consensus       177 ~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~e  255 (286)
T 3uqc_A          177 PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SAST  255 (286)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHH
Confidence            46889999999999999999999999876553211    000000000001234688999999999999999999 9998


Q ss_pred             HhcC
Q psy4166          79 LFAH   82 (249)
Q Consensus        79 i~~~   82 (249)
                      +++.
T Consensus       256 l~~~  259 (286)
T 3uqc_A          256 LLNL  259 (286)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8763

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.35  E-value=7.1e-13  Score=110.10  Aligned_cols=123  Identities=9%  Similarity=0.067  Sum_probs=85.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCC-------------------ee
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHEN-------------------VV  179 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~n-------------------iv  179 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.......   .+.+.+|+.+++.+....|++                   ..
T Consensus        84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (413)
T 3dzo_A           84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK  163 (413)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred             cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence            46889999999999999999999999987433222   355778888877665111111                   11


Q ss_pred             eeeEeEEe-----CCeEEEEEeccCCCCHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccce
Q psy4166         180 ELLHCKES-----DQHVYLVMEFCNGGDLADYLVS-------KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSF  240 (249)
Q Consensus       180 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~ni  240 (249)
                      .+..++..     ...++++|+++ +++|.+++..       .+.+++..+..++.|++.||.|||       |+||+||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NI  242 (413)
T 3dzo_A          164 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI  242 (413)
T ss_dssp             -------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             ccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceE
Confidence            11111111     23478888876 6899999952       224778889999999999999999       9999999


Q ss_pred             eeeec
Q psy4166         241 VILYT  245 (249)
Q Consensus       241 li~~~  245 (249)
                      ||...
T Consensus       243 Ll~~~  247 (413)
T 3dzo_A          243 VLDQR  247 (413)
T ss_dssp             EECTT
T ss_pred             EEecC
Confidence            99754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.34  E-value=4.9e-13  Score=109.21  Aligned_cols=80  Identities=15%  Similarity=0.146  Sum_probs=57.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhcccCC-C------CCCCCCCHHHHHHHHHhhhhCcccC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLV-P------KVPVGTSAELKELLLGLLKRNAMDR   73 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~-~------~~~~~~~~~~~~li~~~l~~~p~~R   73 (249)
                      +..|+.++|||||||++|||++|+.||.+.... ............. +      ..+..+++++.+++..||..||.+|
T Consensus       235 ~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  314 (364)
T 3op5_A          235 GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEK  314 (364)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCC
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCC
Confidence            456899999999999999999999999864322 2111111000000 0      0124578999999999999999999


Q ss_pred             CCHHHHhc
Q psy4166          74 ISFEQLFA   81 (249)
Q Consensus        74 ~~~~~i~~   81 (249)
                      |++.++++
T Consensus       315 P~~~~l~~  322 (364)
T 3op5_A          315 PLYENLRD  322 (364)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHHH
Confidence            99888765

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.34  E-value=6.5e-13  Score=112.26  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=58.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH-Hhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP---QLKQYY-EKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~---~~~~~~-~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +..|+.++|||||||++|||++|+.||.+....   +....+ ..... .....+..++.++.+||..||..||.+||++
T Consensus       187 ~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~  266 (483)
T 3sv0_A          187 GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDY  266 (483)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCH
T ss_pred             CCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCH
Confidence            457889999999999999999999999875442   211111 11111 1111224678999999999999999999998


Q ss_pred             HHHhc
Q psy4166          77 EQLFA   81 (249)
Q Consensus        77 ~~i~~   81 (249)
                      .++++
T Consensus       267 ~el~~  271 (483)
T 3sv0_A          267 SYLKR  271 (483)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87644

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.33  E-value=2.1e-13  Score=109.41  Aligned_cols=80  Identities=18%  Similarity=0.377  Sum_probs=56.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HH----HHhcc---cCCC----CCCCCCCHHHHHHHHHhhhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLK---QY----YEKNL---VLVP----KVPVGTSAELKELLLGLLKR   68 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~---~~----~~~~~---~~~~----~~~~~~~~~~~~li~~~l~~   68 (249)
                      ..|+.++|||||||++|||++|+.||.+..+....   ..    .....   ...+    ..+...+..+.+++.+||..
T Consensus       216 ~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  295 (321)
T 2qkw_B          216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLAL  295 (321)
T ss_dssp             CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999999999765442211   10    00000   0001    11222456789999999999


Q ss_pred             CcccCCCHHHHhcC
Q psy4166          69 NAMDRISFEQLFAH   82 (249)
Q Consensus        69 ~p~~R~~~~~i~~~   82 (249)
                      ||.+||++.+++++
T Consensus       296 dP~~Rps~~ell~~  309 (321)
T 2qkw_B          296 SSEDRPSMGDVLWK  309 (321)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.33  E-value=7.4e-13  Score=106.50  Aligned_cols=78  Identities=22%  Similarity=0.240  Sum_probs=59.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---------------HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ---------------LKQYYEKNLVLVPKVPVGTSAELKELLLGLLK   67 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   67 (249)
                      ..|+.++|||||||++|+|++|..||.......               +...+..  ......+..+++++.++|.+||.
T Consensus       205 ~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~  282 (327)
T 3lxl_A          205 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE--GQRLPAPPACPAEVHELMKLCWA  282 (327)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc--ccCCCCCCcccHHHHHHHHHHcC
Confidence            346789999999999999999999996544321               1112222  22334566789999999999999


Q ss_pred             hCcccCCCHHHHhcC
Q psy4166          68 RNAMDRISFEQLFAH   82 (249)
Q Consensus        68 ~~p~~R~~~~~i~~~   82 (249)
                      .||.+||++.+++++
T Consensus       283 ~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          283 PSPQDRPSFSALGPQ  297 (327)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999664

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.32  E-value=1.7e-13  Score=109.42  Aligned_cols=74  Identities=16%  Similarity=0.270  Sum_probs=57.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ------LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS   75 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~   75 (249)
                      +..|+.++|||||||++|||++|..||.......      .......      ..+..+++++.+++.+||..||.+||+
T Consensus       196 ~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps  269 (310)
T 3s95_A          196 GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR------YCPPNCPPSFFPITVRCCDLDPEKRPS  269 (310)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH------TCCTTCCTTHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc------cCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            4678999999999999999999999987543311      1111111      124567889999999999999999999


Q ss_pred             HHHHhc
Q psy4166          76 FEQLFA   81 (249)
Q Consensus        76 ~~~i~~   81 (249)
                      +.++++
T Consensus       270 ~~~l~~  275 (310)
T 3s95_A          270 FVKLEH  275 (310)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.32  E-value=2.4e-13  Score=118.17  Aligned_cols=86  Identities=24%  Similarity=0.302  Sum_probs=59.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH------HHHh--------c-c------cCCCCCCCCCCHHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQ------YYEK--------N-L------VLVPKVPVGTSAELKE   60 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~------~~~~--------~-~------~~~~~~~~~~~~~~~~   60 (249)
                      +..|+.++||||+||++|||++|..||.+........      ....        . .      ..+...+..+++.+.+
T Consensus       197 ~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~d  276 (676)
T 3qa8_A          197 QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLER  276 (676)
T ss_dssp             CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHH
T ss_pred             cCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHH
Confidence            4678999999999999999999999997754321100      0000        0 0      0000112235688999


Q ss_pred             HHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          61 LLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        61 li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      ||.+||..||.+||++.+++.|+||..
T Consensus       277 LI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          277 WLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            999999999999999999999999863

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.32  E-value=9.6e-13  Score=102.40  Aligned_cols=113  Identities=16%  Similarity=0.069  Sum_probs=82.5

Q ss_pred             ccccCCCCcceeeccCCCCCCe--eEEEEeeccccc--c----------------------hhcHHHHHHHHHHhhhcCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQH--VAIKRITKKNLA--K----------------------TQNFGKEINILKELTELHH  175 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~--vavK~~~~~~~~--~----------------------~~~~~~e~~~~~~~~~~~h  175 (249)
                      ..+|.|.++.||.+....+++.  ||+|+++.....  +                      ...+.+|+..++.+.   |
T Consensus        53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---~  129 (258)
T 1zth_A           53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK---E  129 (258)
T ss_dssp             EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH---H
T ss_pred             CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH---h
Confidence            4678899999999987667888  999987543211  0                      024678999998887   6


Q ss_pred             CCe--eeeeEeEEeCCeEEEEEeccCC-C----CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccce
Q psy4166         176 ENV--VELLHCKESDQHVYLVMEFCNG-G----DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSF  240 (249)
Q Consensus       176 ~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~ni  240 (249)
                      +++  +.++..    ...+|||||+.+ |    +|.++...   .++..+..++.|++.|+.|||        |+||+||
T Consensus       130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NI  202 (258)
T 1zth_A          130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNI  202 (258)
T ss_dssp             TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSE
T ss_pred             CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHE
Confidence            653  334432    356899999942 3    67766432   346678899999999999999        9999999


Q ss_pred             eeee
Q psy4166         241 VILY  244 (249)
Q Consensus       241 li~~  244 (249)
                      |+..
T Consensus       203 Ll~~  206 (258)
T 1zth_A          203 MYID  206 (258)
T ss_dssp             EESS
T ss_pred             EEcC
Confidence            9853

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.31  E-value=1.1e-12  Score=105.21  Aligned_cols=77  Identities=22%  Similarity=0.258  Sum_probs=58.5

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---------------HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP---------------QLKQYYEKNLVLVPKVPVGTSAELKELLLGLLK   67 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   67 (249)
                      ..|+.++|||||||++|||++|..||......               .+...+..  ......+..+++++.+||.+||.
T Consensus       212 ~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~  289 (318)
T 3lxp_A          212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER--GERLPRPDKCPAEVYHLMKNCWE  289 (318)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc--ccCCCCCccccHHHHHHHHHHcC
Confidence            35678999999999999999999999654321               11111222  22334566789999999999999


Q ss_pred             hCcccCCCHHHHhc
Q psy4166          68 RNAMDRISFEQLFA   81 (249)
Q Consensus        68 ~~p~~R~~~~~i~~   81 (249)
                      .||.+||++.++++
T Consensus       290 ~dP~~Rps~~ell~  303 (318)
T 3lxp_A          290 TEASFRPTFENLIP  303 (318)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.31  E-value=9.9e-13  Score=105.60  Aligned_cols=77  Identities=13%  Similarity=0.082  Sum_probs=53.1

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCH----------------HHHHHHHHhcccCCCCCCC-----CCCHHHHHHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSP----------------PQLKQYYEKNLVLVPKVPV-----GTSAELKELL   62 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~----------------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li   62 (249)
                      .|+.++|||||||++|||++|+.||.+...                ........ .....+..+.     ..++++.+||
T Consensus       214 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li  292 (322)
T 3soc_A          214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVV-HKKKRPVLRDYWQKHAGMAMLCETI  292 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHT-TSCCCCCCCGGGGSSHHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhh-cccCCCCccccccccchHHHHHHHH
Confidence            455688999999999999999999976432                11111111 1111122111     1235699999


Q ss_pred             HHhhhhCcccCCCHHHHhc
Q psy4166          63 LGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus        63 ~~~l~~~p~~R~~~~~i~~   81 (249)
                      .+||..||.+||++.++++
T Consensus       293 ~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          293 EECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHH
Confidence            9999999999999999875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.28  E-value=2.5e-12  Score=101.98  Aligned_cols=77  Identities=17%  Similarity=0.287  Sum_probs=54.3

Q ss_pred             CCCcchhHHHHHHHHHHHHcC----------CCCCCCCCH-----HHHHHHHHhcccCCCCCCC-----CCCHHHHHHHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTG----------KAPFIANSP-----PQLKQYYEKNLVLVPKVPV-----GTSAELKELLL   63 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g----------~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~   63 (249)
                      .|+.++|||||||++|||++|          ..||.....     ....... ......+..+.     ..++++.+|+.
T Consensus       199 ~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~  277 (301)
T 3q4u_A          199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV-CVDQQRPNIPNRWFSDPTLTSLAKLMK  277 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH-TTSCCCCCCCGGGGGSHHHHHHHHHHH
T ss_pred             cCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHH-hccCCCCCCChhhccCccHHHHHHHHH
Confidence            345789999999999999999          899965322     2222221 11222222222     24578999999


Q ss_pred             HhhhhCcccCCCHHHHhc
Q psy4166          64 GLLKRNAMDRISFEQLFA   81 (249)
Q Consensus        64 ~~l~~~p~~R~~~~~i~~   81 (249)
                      +||..||.+||++.++++
T Consensus       278 ~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          278 ECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHCCSSGGGSCCHHHHHH
T ss_pred             HHhhcChhhCCCHHHHHH
Confidence            999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.27  E-value=5e-12  Score=99.39  Aligned_cols=78  Identities=19%  Similarity=0.203  Sum_probs=59.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +..|+.++|||||||++|||++|..||...  .........     ...+..++.++.++|.+||..||.+||++.++++
T Consensus       195 ~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  267 (284)
T 2a19_B          195 SQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRD-----GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR  267 (284)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHT-----TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhc-----ccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            456889999999999999999999887432  111111111     1234568899999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      +.+.-
T Consensus       268 ~l~~~  272 (284)
T 2a19_B          268 TLTVW  272 (284)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            86543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.27  E-value=5.3e-12  Score=100.20  Aligned_cols=77  Identities=18%  Similarity=0.196  Sum_probs=56.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---------------HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSP---------------PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLK   67 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   67 (249)
                      ..|+.++||||+||++|||++|..|+.....               .........  ......+..+++++.++|.+||.
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~  281 (302)
T 4e5w_A          204 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE--GKRLPCPPNCPDEVYQLMRKCWE  281 (302)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc--cCCCCCCCCCCHHHHHHHHHHcC
Confidence            3567789999999999999999988643211               111111222  22334566789999999999999


Q ss_pred             hCcccCCCHHHHhc
Q psy4166          68 RNAMDRISFEQLFA   81 (249)
Q Consensus        68 ~~p~~R~~~~~i~~   81 (249)
                      .||.+||++.++++
T Consensus       282 ~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          282 FQPSNRTSFQNLIE  295 (302)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CCCCCCCCHHHHHH
Confidence            99999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.26  E-value=3.3e-12  Score=102.68  Aligned_cols=77  Identities=19%  Similarity=0.269  Sum_probs=57.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP----------------QLKQYYEKNLVLVPKVPVGTSAELKELLLGLL   66 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   66 (249)
                      ..|+.++|||||||++|||++|..||......                .+...+...  ..+..+..++.++.++|.+||
T Consensus       223 ~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl  300 (326)
T 2w1i_A          223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN--GRLPRPDGCPDEIYMIMTECW  300 (326)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHHS
T ss_pred             CCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC--CCCCCCCcccHHHHHHHHHHc
Confidence            34678999999999999999999998643111                111112111  123346678999999999999


Q ss_pred             hhCcccCCCHHHHhc
Q psy4166          67 KRNAMDRISFEQLFA   81 (249)
Q Consensus        67 ~~~p~~R~~~~~i~~   81 (249)
                      ..||.+||++.++++
T Consensus       301 ~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          301 NNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999998865

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.25  E-value=4.5e-12  Score=102.19  Aligned_cols=85  Identities=18%  Similarity=0.198  Sum_probs=54.9

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCC-CHH----------------HHHHHHHhcccCCCCCCCC------CCHHHHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIAN-SPP----------------QLKQYYEKNLVLVPKVPVG------TSAELKE   60 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~-~~~----------------~~~~~~~~~~~~~~~~~~~------~~~~~~~   60 (249)
                      .|+.++|||||||++|||++|..||... +..                .............+..+..      .++++.+
T Consensus       211 ~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  290 (336)
T 3g2f_A          211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKE  290 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHH
Confidence            4567899999999999999997665332 210                0111111112222333332      3457999


Q ss_pred             HHHHhhhhCcccCCCHHHHhc------CCCCCCC
Q psy4166          61 LLLGLLKRNAMDRISFEQLFA------HPFLQPL   88 (249)
Q Consensus        61 li~~~l~~~p~~R~~~~~i~~------~~~~~~~   88 (249)
                      ||.+||..||++||++.++++      ++|-++.
T Consensus       291 li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          291 TIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             HHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999844      5666643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.25  E-value=3.1e-12  Score=102.72  Aligned_cols=81  Identities=16%  Similarity=0.196  Sum_probs=54.6

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcccC-----------CCCCCCCCCHHHHHHHHHhh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIAN-----SPPQLKQYYEKNLVL-----------VPKVPVGTSAELKELLLGLL   66 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~-----~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~li~~~l   66 (249)
                      ..|+.++||||+||++|||++|+.||...     ...............           ....+...+..+.+++.+||
T Consensus       210 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  289 (326)
T 3uim_A          210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCT  289 (326)
T ss_dssp             SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHT
T ss_pred             CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHh
Confidence            45788999999999999999999999521     111111111111000           00111122467899999999


Q ss_pred             hhCcccCCCHHHHhcCC
Q psy4166          67 KRNAMDRISFEQLFAHP   83 (249)
Q Consensus        67 ~~~p~~R~~~~~i~~~~   83 (249)
                      +.||.+||++.+++++-
T Consensus       290 ~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          290 QSSPMERPKMSEVVRML  306 (326)
T ss_dssp             CSCGGGSCCHHHHHHHH
T ss_pred             CcCCccCCCHHHHHHHh
Confidence            99999999999999874

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.25  E-value=1.2e-12  Score=104.32  Aligned_cols=79  Identities=18%  Similarity=0.255  Sum_probs=55.8

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHhc--------ccCCCCCCCCCCHHHHHHHHHhhhhCcc
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL----KQYYEKN--------LVLVPKVPVGTSAELKELLLGLLKRNAM   71 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~----~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~l~~~p~   71 (249)
                      .|+.++|||||||++|+|++|.+||.+......    ...+...        .......+...+..+.+++.+||..||.
T Consensus       210 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~  289 (307)
T 2nru_A          210 EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKN  289 (307)
T ss_dssp             EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTT
T ss_pred             CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcc
Confidence            467899999999999999999999987544221    1111110        0111112223456789999999999999


Q ss_pred             cCCCHHHHhcC
Q psy4166          72 DRISFEQLFAH   82 (249)
Q Consensus        72 ~R~~~~~i~~~   82 (249)
                      +||++.+++++
T Consensus       290 ~Rps~~~l~~~  300 (307)
T 2nru_A          290 KRPDIKKVQQL  300 (307)
T ss_dssp             TSCCHHHHHHH
T ss_pred             cCcCHHHHHHH
Confidence            99999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=9.4e-12  Score=100.27  Aligned_cols=74  Identities=19%  Similarity=0.311  Sum_probs=52.2

Q ss_pred             chhHHHHHHHHHHHHcC----------CCCCCCCCH-----HHHHHHHHhcccCCCCCCC-----CCCHHHHHHHHHhhh
Q psy4166           8 KADLYSVGTIVFQCLTG----------KAPFIANSP-----PQLKQYYEKNLVLVPKVPV-----GTSAELKELLLGLLK   67 (249)
Q Consensus         8 ~~DiwS~G~il~el~~g----------~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~   67 (249)
                      ++|||||||++|||++|          +.||.....     ....... ......+..+.     .+++++.++|.+||.
T Consensus       232 ~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  310 (337)
T 3mdy_A          232 MADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIV-CIKKLRPSFPNRWSSDECLRQMGKLMTECWA  310 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH-TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSC
T ss_pred             ccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHH-hhhccCccccccchhhHHHHHHHHHHHHhhh
Confidence            49999999999999999          777755322     1222222 22222223332     356779999999999


Q ss_pred             hCcccCCCHHHHhcC
Q psy4166          68 RNAMDRISFEQLFAH   82 (249)
Q Consensus        68 ~~p~~R~~~~~i~~~   82 (249)
                      .||.+||++.+++++
T Consensus       311 ~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          311 HNPASRLTALRVKKT  325 (337)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             hChhhCCCHHHHHHH
Confidence            999999999998875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.20  E-value=5.6e-12  Score=104.13  Aligned_cols=78  Identities=24%  Similarity=0.350  Sum_probs=53.5

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhcccCC----------------------CCCCCCCCHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSP----PQLKQYYEKNLVLV----------------------PKVPVGTSAE   57 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~----------------------~~~~~~~~~~   57 (249)
                      .|+.++|||||||++|||++|+.||.+...    .+....+....+..                      ...+..++..
T Consensus       199 ~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  278 (396)
T 4eut_A          199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL  278 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhh
Confidence            467789999999999999999999964322    22222222221110                      0011223467


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhc
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+++.+||+.||.+|+++.++++
T Consensus       279 l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          279 LTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             chHHHHHhhccChhhhccHHHHHH
Confidence            889999999999999999998754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.19  E-value=9.5e-12  Score=100.50  Aligned_cols=76  Identities=14%  Similarity=0.298  Sum_probs=53.8

Q ss_pred             CcchhHHHHHHHHHHHHcC----------CCCCCCCCH-----HHHHHHHHhcccCCCCCCC-----CCCHHHHHHHHHh
Q psy4166           6 DAKADLYSVGTIVFQCLTG----------KAPFIANSP-----PQLKQYYEKNLVLVPKVPV-----GTSAELKELLLGL   65 (249)
Q Consensus         6 ~~~~DiwS~G~il~el~~g----------~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~   65 (249)
                      +.++|||||||++|||++|          ..||.....     ......+. .....+..+.     ..+..+.+++.+|
T Consensus       235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~c  313 (342)
T 1b6c_B          235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC-EQKLRPNIPNRWQSCEALRVMAKIMREC  313 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT-TSCCCCCCCGGGGTSHHHHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHH-HHHhCCCCcccccchhHHHHHHHHHHHH
Confidence            3689999999999999999          789876432     22222221 1122222232     2345789999999


Q ss_pred             hhhCcccCCCHHHHhcC
Q psy4166          66 LKRNAMDRISFEQLFAH   82 (249)
Q Consensus        66 l~~~p~~R~~~~~i~~~   82 (249)
                      |..||.+||++.+++++
T Consensus       314 l~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          314 WYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCSSGGGSCCHHHHHHH
T ss_pred             hccChhhCCCHHHHHHH
Confidence            99999999999998865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	249
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-19
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-18
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-14
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-16
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-16
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-15
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-14
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-13
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-10
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-13
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-11
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-13
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	8e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.004
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-12
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-12
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-12
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-12
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-10
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-11
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-11
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-10
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-10
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-10
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	8e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-06

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.5 bits (206), Expect = 1e-19
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 6/89 (6%)

Query: 142 QHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VAIK I KK L  K  +   EI +L ++    H N+V L    ES  H+YL+M+  +G
Sbjct: 35  KLVAIKCIAKKALEGKEGSMENEIAVLHKI---KHPNIVALDDIYESGGHLYLIMQLVSG 91

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           G+L D +V KG  +E      +   Q+L 
Sbjct: 92  GELFDRIVEKGFYTERDASRLIF--QVLD 118

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.4 bits (172), Expect = 7e-15
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-KQYYEKNLVLVPKVPVGTSAELK 59
               Y    D +S+G I +  L G  PF   +  +L +Q  +             S   K
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 241

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQ 86
           + +  L++++   R + EQ   HP++ 
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIA 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.5 bits (198), Expect = 3e-18
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +    K I             EI+I+ +L   HH  ++ L    E    + L++EF +GG
Sbjct: 55  RVFVAKFINTPYPLDKYTVKNEISIMNQL---HHPKLINLHDAFEDKYEMVLILEFLSGG 111

Query: 202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQ--LYFHD 234
           +L D + ++   +SE  +  +++  Q  +   + H+
Sbjct: 112 ELFDRIAAEDYKMSEAEVINYMR--QACEGLKHMHE 145

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 3/133 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELK 59
                    D++++G + +  L+G +PF        L+     +           S E K
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPL--APHPLIPEPHAGSPVTLSPEDSTDDFVVI 117
           + +  LL++    R++      HP+L+         IP            E   D     
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQ 320

Query: 118 PNSADVVSTSPPR 130
           P    + + S  R
Sbjct: 321 PAIGRIANFSSLR 333

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 7e-18
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
               Y  K D++S+G +  + + G+ P++  +P +       N     + P   SA  ++
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLAPH----PLIPEP 97
            L   L  +   R S ++L  H FL+   P     PLI   
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAA 289

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 1e-16
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 4/93 (4%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VAI+++  +   K +    EI +++E     + N+V  L        +++VME+  GG
Sbjct: 46  QEVAIRQMNLQQQPKKELIINEILVMREN---KNPNIVNYLDSYLVGDELWVVMEYLAGG 102

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD 234
            L D +            +  +  Q L+ + H 
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALE-FLHS 134

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 12/105 (11%)

Query: 142 QHVAIKRITKKNLAKTQN-FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
             +A K I  +     +N   +E+ +L E    +   +V       SD  + + ME  +G
Sbjct: 32  LVMARKLIHLEIKPAIRNQIIRELQVLHEC---NSPYIVGFYGAFYSDGEISICMEHMDG 88

Query: 201 GDLADYLVSKGTLSEDTIRIFLK--------LHQMLQLYFHDFTP 237
           G L   L   G + E  +             L +  ++   D  P
Sbjct: 89  GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 3e-10
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 41/127 (32%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV--------------- 45
               Y  ++D++S+G  + +   G+ P       +L+  +   +                
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235

Query: 46  -------------------------LVPKVPVGT-SAELKELLLGLLKRNAMDRISFEQL 79
                                      PK+P G  S E ++ +   L +N  +R   +QL
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

Query: 80  FAHPFLQ 86
             H F++
Sbjct: 296 MVHAFIK 302

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 77.4 bits (190), Expect = 3e-17
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
            + A K +   + +  +   KEI  +  L    H  +V L    E D  + ++ EF +GG
Sbjct: 52  NNFAAKFVMTPHESDKETVRKEIQTMSVL---RHPTLVNLHDAFEDDNEMVMIYEFMSGG 108

Query: 202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQ--LYFHD 234
           +L + +  +   +SED    +++  Q+ +   + H+
Sbjct: 109 ELFEKVADEHNKMSEDEAVEYMR--QVCKGLCHMHE 142

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 75.1 bits (184), Expect = 2e-16
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 2/143 (1%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELK 59
                    D++SVG + +  L+G +PF   +    L+     +  +      G S + K
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPN 119
           + +  LL  +   R++  Q   HP+L P    P        S  T   +     +   P 
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEHPWLTP-GNAPGRDSQIPSSRYTKIRDSIKTKYDAWPE 316

Query: 120 SADVVSTSPPRPSSLLLSPAPSQ 142
               +       S     P    
Sbjct: 317 PLPPLGRISNYSSLRKHRPQEYS 339

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 6e-17
 Identities = 23/90 (25%), Positives = 41/90 (45%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
            YD KAD++S+G  + +    + P    +P ++     K+       P   S+  K+ L 
Sbjct: 191 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
             L++N   R +  QL  HPF+   +  P+
Sbjct: 251 KCLEKNVDARWTTSQLLQHPFVTVDSNKPI 280

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 1e-16
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
              A K I  K+  + +++  EI+IL       H N+V+LL     + ++++++EFC GG
Sbjct: 38  VLAAAKVIDTKSEEELEDYMVEIDILASC---DHPNIVKLLDAFYYENNLWILIEFCAGG 94

Query: 202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQ--LYFHD 234
            +   ++     L+E  I++  K  Q L    Y HD
Sbjct: 95  AVDAVMLELERPLTESQIQVVCK--QTLDALNYLHD 128

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 1e-16
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
               +D K DL+S+G + ++ L GK PF AN+  +    Y++   +    P   +   ++
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVEFTFPDFVTEGARD 233

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQ 86
           L+  LLK N   R    ++  HP++ 
Sbjct: 234 LISRLLKHNPSQRPMLREVLEHPWIT 259

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 3e-14
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 10/98 (10%)

Query: 142 QHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             +A+K + K  L K        +E+ I   L    H N++ L         VYL++E+ 
Sbjct: 32  FILALKVLFKAQLEKAGVEHQLRREVEIQSHL---RHPNILRLYGYFHDATRVYLILEYA 88

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
             G +   L       E     ++   ++     Y H 
Sbjct: 89  PLGTVYRELQKLSKFDEQRTATYIT--ELANALSYCHS 124

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.0 bits (184), Expect = 1e-16
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           + VAIK+++          Q+  KE+  L++L    H N ++   C   +   +LVME+C
Sbjct: 41  EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL---RHPNTIQYRGCYLREHTAWLVMEYC 97

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            G       V K  L E  I      H  LQ   Y H 
Sbjct: 98  LGSASDLLEVHKKPLQEVEIAAV--THGALQGLAYLHS 133

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.4 bits (159), Expect = 4e-13
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 1/93 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
           +YD K D++S+G    +    K P    +      +  +N     +     S   +  + 
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ-SGHWSEYFRNFVD 248

Query: 64  GLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPE 96
             L++   DR + E L  H F+    P  +I +
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD 281

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 2e-16
 Identities = 17/82 (20%), Positives = 34/82 (41%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +  AIK + K+++ K             ++ L H   V+L    + D+ +Y  + +   G
Sbjct: 34  REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 93

Query: 202 DLADYLVSKGTLSEDTIRIFLK 223
           +L  Y+   G+  E   R +  
Sbjct: 94  ELLKYIRKIGSFDETCTRFYTA 115

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 8e-13
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
                   +DL+++G I++Q + G  PF A +   +   ++K + L    P     + ++
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI---FQKIIKLEYDFPEKFFPKARD 239

Query: 61  LLLGLLKRNAMDRISFEQLF------AHPFLQPL 88
           L+  LL  +A  R+  E++       AHPF + +
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 74.3 bits (182), Expect = 2e-16
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)

Query: 142 QHVAIKRITKKNLAKT---------QNFGKEINILKELTELHHENVVELLHCKESDQHVY 192
           +  A+K I                 +   KE++IL++++   H N+++L    E++   +
Sbjct: 29  KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS--GHPNIIQLKDTYETNTFFF 86

Query: 193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           LV +    G+L DYL  K TLSE   R  ++   +L+     H 
Sbjct: 87  LVFDLMKKGELFDYLTEKVTLSEKETRKIMR--ALLEVICALHK 128

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 72.0 bits (176), Expect = 1e-15
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELL 62
            Y  + D++S G I++  L G  PF        L+     N           S  +K+L+
Sbjct: 191 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 250

Query: 63  LGLLKRNAMDRISFEQLFAHPFLQ 86
              L      R + E+  AHPF Q
Sbjct: 251 SRFLVVQPQKRYTAEEALAHPFFQ 274

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 4e-16
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 1/134 (0%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELK 59
                    D++S+GT+V+  L+G  PF+A +  Q ++           +     S E  
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDDFVVIPN 119
           + +  LL +    R++  +   HP+L+                          D  ++ +
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVS 295

Query: 120 SADVVSTSPPRPSS 133
           +A +      R   
Sbjct: 296 AARISCGGAIRSQK 309

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 4e-14
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           +    K + K          KEI+IL       H N++ L    ES + + ++ EF +G 
Sbjct: 31  KTYMAKFV-KVKGTDQVLVKKEISILNIA---RHRNILHLHESFESMEELVMIFEFISGL 86

Query: 202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFHD 234
           D+ + + +    L+E  I  ++        + H 
Sbjct: 87  DIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 7e-16
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 142 QHVAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           + VA+K +  K      +N  KEI I K L   +HENVV+    +      YL +E+C+G
Sbjct: 31  EAVAVKIVDMKRAVDCPENIKKEICINKML---NHENVVKFYGHRREGNIQYLFLEYCSG 87

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           G+L D +     + E   + F   HQ++   +Y H 
Sbjct: 88  GELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 121

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 1e-12
 Identities = 14/82 (17%), Positives = 27/82 (32%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +    D++S G ++   L G+ P+   S    +    K             +    LL  
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 242

Query: 65  LLKRNAMDRISFEQLFAHPFLQ 86
           +L  N   RI+   +    +  
Sbjct: 243 ILVENPSARITIPDIKKDRWYN 264

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 7e-16
 Identities = 20/83 (24%), Positives = 35/83 (42%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLL 63
           KYD   D+Y+ G  + +  T + P+              + V           E+KE++ 
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 247

Query: 64  GLLKRNAMDRISFEQLFAHPFLQ 86
           G +++N  +R S + L  H F Q
Sbjct: 248 GCIRQNKDERYSIKDLLNHAFFQ 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 9/99 (9%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVM 195
             VA   +  + L K+  Q F +E  +LK L    H N+V      ES     + + LV 
Sbjct: 35  VEVAWCELQDRKLTKSERQRFKEEAEMLKGL---QHPNIVRFYDSWESTVKGKKCIVLVT 91

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD 234
           E    G L  YL     +    +R + +       + H 
Sbjct: 92  ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 130

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 1e-15
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 1/96 (1%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELK 59
                  +AD++S+G I +  L+G +PF+ ++  + L      N     +    TSA  K
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
           + +  LL ++   R++ +    HP+++P      + 
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALS 284

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 3e-14
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKE---LTELHHENVVELLHCKESDQHVYLVMEFC 198
              A K I K+    ++      +I +E   L E+ H NV+ L    E+   V L++E  
Sbjct: 36  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELV 95

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVI 242
            GG+L D+L  K +L+E+    FLK       Y H      F +
Sbjct: 96  AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDL 139

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.9 bits (176), Expect = 1e-15
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
             M Y+ K+D++S+G ++++      PF A S  +L     +      ++P   S EL E
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF--RRIPYRYSDELNE 244

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFL 85
           ++  +L      R S E++  +P +
Sbjct: 245 IITRMLNLKDYHRPSVEEILENPLI 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 3e-15
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHC--KESDQHVYLVMEF 197
           + +  K +   ++ +   Q    E+N+L+EL    H N+V         ++  +Y+VME+
Sbjct: 30  KILVWKELDYGSMTEAEKQMLVSEVNLLREL---KHPNIVRYYDRIIDRTNTTLYIVMEY 86

Query: 198 CNGGDLADYLV----SKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILY 244
           C GGDLA  +      +  L E+ +   +    +     H  +     +L+
Sbjct: 87  CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLH 137

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCNG 200
             VA+K I     A  Q F  E +++ +L    H N+V+LL    E    +Y+V E+   
Sbjct: 31  NKVAVKCIKND--ATAQAFLAEASVMTQL---RHSNLVQLLGVIVEEKGGLYIVTEYMAK 85

Query: 201 GDLADYLVSKG--TLSEDTIRIFLK 223
           G L DYL S+G   L  D +  F  
Sbjct: 86  GSLVDYLRSRGRSVLGGDCLLKFSL 110

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 2e-10
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
              K+  K+D++S G ++++  + G+ P+       +    EK        P G    + 
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--YKMDAPDGCPPAVY 230

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
           E++      +A  R SF QL     L+ +  H L
Sbjct: 231 EVMKNCWHLDAAMRPSFLQLREQ--LEHIKTHEL 262

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 6e-15
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 144 VAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VA+K + +K  +   +    E+ ++ +L    HEN+V LL        +YL+ E+C  GD
Sbjct: 70  VAVKMLKEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIYLIFEYCCYGD 127

Query: 203 LADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISI 248
           L +YL SK     +    +    ++ +    +   +  ++ +   +
Sbjct: 128 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 173

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 6e-07
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
               Y  K+D++S G ++++  + G  P+             +N       P   + E+ 
Sbjct: 239 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN-GFKMDQPFYATEEIY 297

Query: 60  ELLLGLLKRNAMDRISFEQLFAH 82
            ++      ++  R SF  L + 
Sbjct: 298 IIMQSCWAFDSRKRPSFPNLTSF 320

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.5 bits (172), Expect = 8e-15
 Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 3/96 (3%)

Query: 142 QHVAIKRITKKNLAKTQN---FGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           +  A+K + KK +   Q       E  +L  ++      +V + +   +   +  +++  
Sbjct: 30  KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 89

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD 234
           NGGDL  +L   G  SE  +R +     +   + H+
Sbjct: 90  NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 125

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.8 bits (170), Expect = 1e-14
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 14/110 (12%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELL 62
           + YD+ AD +S+G ++F+ L G +PF  +      +     L +  ++P   S EL+ LL
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240

Query: 63  LGLLKRNAMDRIS-----FEQLFAHPFLQPL---------APHPLIPEPH 98
            GLL+R+   R+       +++   PF + L          P PLIP   
Sbjct: 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRG 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 4e-14
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 142 QHVAIKRITK-KNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
             VA+K +    +L + +    E+ +L  L   +H N+V LL          ++ E+C  
Sbjct: 54  MTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCY 111

Query: 201 GDLADYLVSKG 211
           GDL ++L  K 
Sbjct: 112 GDLLNFLRRKR 122

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 5e-14
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 142 QHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           Q  AIK + K  +      +    E  +L       H  +  +    ++ ++++ VME+ 
Sbjct: 28  QFFAIKALKKDVVLMDDDVECTMVEKRVLSLA--WEHPFLTHMFCTFQTKENLFFVMEYL 85

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLK 223
           NGGDL  ++ S           +  
Sbjct: 86  NGGDLMYHIQSCHKFDLSRATFYAA 110

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 13/107 (12%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           +  KY+   D +S G ++++ L G++PF      +L      +    P  P     E K+
Sbjct: 176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD---NPFYPRWLEKEAKD 232

Query: 61  LLLGLLKRNAMDRISFE-QLFAHPFLQPL---------APHPLIPEP 97
           LL+ L  R    R+     +  HP  + +            P  P+ 
Sbjct: 233 LLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKV 279

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.5 bits (164), Expect = 6e-14
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 142 QHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQH----VYLV 194
           + VA+K +             F +E      L   +H  +V +    E++       Y+V
Sbjct: 33  RDVAVKVLRADLARDPSFYLRFRREAQNAAAL---NHPAIVAVYDTGEAETPAGPLPYIV 89

Query: 195 MEFCNGGDLADYLVSKGTLSEDTIRIFLK 223
           ME+ +G  L D + ++G ++       + 
Sbjct: 90  MEYVDGVTLRDIVHTEGPMTPKRAIEVIA 118

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 62.5 bits (151), Expect = 3e-12
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELK 59
                DA++D+YS+G ++++ LTG+ PF  +SP     Q+  ++ +       G SA+L 
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQ 86
            ++L  L +N  +R           ++
Sbjct: 247 AVVLKALAKNPENRYQTAAEMRADLVR 273

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 8e-14
 Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 17/101 (16%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVMEF 197
           +  A+K +     A+     +E+ +          ++V ++   E+     + + +VME 
Sbjct: 38  EKFALKMLQDCPKAR-----REVELHWRA--SQCPHIVRIVDVYENLYAGRKCLLIVMEC 90

Query: 198 CNGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQ--LYFHD 234
            +GG+L   +  +G    +E      +K   + +   Y H 
Sbjct: 91  LDGGELFSRIQDRGDQAFTEREASEIMK--SIGEAIQYLHS 129

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 3e-13
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-----LVPKVPVGTS 55
              KYD   D++S+G I++  L G  PF +N    +    +  +               S
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245

Query: 56  AELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIP 95
            E+K L+  LLK     R++  +   HP++      P  P
Sbjct: 246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 285

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 3e-13
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 25/157 (15%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
               Y    D + +G ++++ + G+ PF      +L   +E  L+   + P   S E K 
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKS 234

Query: 61  LLLGLLKRNAMDRIS-----FEQLFAHPFLQPL---------APHPLIPEPHAGSPVTLS 106
           LL GLLK++   R+       +++  H F   +            P  P+         S
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVT-------S 287

Query: 107 PEDSTDDFVVIPNSADVVSTSPPRPSSLLLSPAPSQH 143
             D T  F     +  +  T P R  SL L     + 
Sbjct: 288 EVD-TRYFDDEFTAQSITITPPDRYDSLGLLELDQRE 323

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 1e-10
 Identities = 16/82 (19%), Positives = 36/82 (43%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           ++ A+K + K+ +         +   + L    H  +  L +  ++   +  VME+ NGG
Sbjct: 31  RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90

Query: 202 DLADYLVSKGTLSEDTIRIFLK 223
           +L  +L  +   +E+  R +  
Sbjct: 91  ELFFHLSRERVFTEERARFYGA 112

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 3e-13
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 8/95 (8%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
             VAIK + +      T+   +E  I+ +L    +  +V L+   +  + + LVME   G
Sbjct: 37  IDVAIKVLKQGTEKADTEEMMREAQIMHQL---DNPYIVRLIGVCQ-AEALMLVMEMAGG 92

Query: 201 GDLADYLVSK-GTLSEDTI-RIFLKLHQMLQLYFH 233
           G L  +LV K   +    +  +  ++   ++ Y  
Sbjct: 93  GPLHKFLVGKREEIPVSNVAELLHQVSMGMK-YLE 126

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
              K+ +++D++S G  +++ L+ G+ P+     P++  + E+      + P     EL 
Sbjct: 185 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG--KRMECPPECPPELY 242

Query: 60  ELLLGLLKRNAMDRISFEQL---FAHPFLQ 86
            L+         DR  F  +       +  
Sbjct: 243 ALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 4e-13
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 12/116 (10%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELL 62
            +D   D +S+G ++++ LTG +PF  +       +   + L   P  P   SA  K+L+
Sbjct: 208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI 267

Query: 63  LGLLKRNAMDRISF-----EQLFAHPFLQPLAPHPL----IPEPHAGSPVTLSPED 109
             LL ++   R+       +++  H F Q +    L    +P P    PV     D
Sbjct: 268 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPF--KPVIRDELD 321

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 9e-11
 Identities = 16/86 (18%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 142 QHVAIKRITKKNLAK----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF 197
           +  A+K + K  + +    T++   E  +L+ +       +V L +  +++  ++L++++
Sbjct: 53  KLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR--QSPFLVTLHYAFQTETKLHLILDY 110

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLK 223
            NGG+L  +L  +   +E  ++I++ 
Sbjct: 111 INGGELFTHLSQRERFTEHEVQIYVG 136

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 5e-13
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
             VAIK I ++     ++F +E  ++ +L    H  +V+L         + LV EF   G
Sbjct: 30  DKVAIKTI-REGAMSEEDFIEEAEVMMKL---SHPKLVQLYGVCLEQAPICLVFEFMEHG 85

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH 233
            L+DYL ++  L      + + L     + + 
Sbjct: 86  CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 3e-09
 Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
              +Y +K+D++S G ++++  + GK P+   S  ++ +       L    P   S  + 
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK--PRLASTHVY 232

Query: 60  ELLLGLLKRNAMDRISFEQLFAH 82
           +++    K    DR +F +L   
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLRQ 255

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 8e-13
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 142 QHVAIKRITKKNL--AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K +  +    A       E N++++L    +  +V ++   E++    LVME   
Sbjct: 35  KTVAVKILKNEANDPALKDELLAEANVMQQL---DNPYIVRMIGICEAE-SWMLVMEMAE 90

Query: 200 GGDLADYLVSKGTLSEDTIRIFLK 223
            G L  YL     + +  I   + 
Sbjct: 91  LGPLNKYLQQNRHVKDKNIIELVH 114

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 9e-13
 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 9/96 (9%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLVMEF 197
           + VA+K  + +   + +++ +E  I +    L HEN++  +     D      ++LV ++
Sbjct: 27  EEVAVKIFSSR---EERSWFREAEIYQ-TVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82

Query: 198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH 233
              G L DYL       E  I++ L     L  + H
Sbjct: 83  HEHGSLFDYLNRYTVTVEGMIKLALSTASGLA-HLH 117

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 11/95 (11%), Positives = 35/95 (36%), Gaps = 19/95 (20%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPF------------IANSPPQLKQYYEKNL--VLVPK 49
           +   +AD+Y++G + ++     +              +  S P +++  +      L P 
Sbjct: 194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 253

Query: 50  VPVGTSA-----ELKELLLGLLKRNAMDRISFEQL 79
           +P    +      + +++      N   R++  ++
Sbjct: 254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 1e-12
 Identities = 18/95 (18%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
             VA+K + + +++    F  E N++K+L    H+ +V L     + + +Y++ E+   G
Sbjct: 38  TKVAVKSLKQGSMSP-DAFLAEANLMKQL---QHQRLVRLYAV-VTQEPIYIITEYMENG 92

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            L D+L +   +     ++     Q+ +   +  +
Sbjct: 93  SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 8e-09
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
               +  K+D++S G ++ + +T G+ P+   + P++ Q  E+   +V   P     EL 
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR--PDNCPEELY 240

Query: 60  ELLLGLLKRNAMDRISFEQL 79
           +L+    K    DR +F+ L
Sbjct: 241 QLMRLCWKERPEDRPTFDYL 260

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 1e-12
 Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
             VAIK I + ++++   F +E  ++  L    HE +V+L       + ++++ E+   G
Sbjct: 29  YDVAIKMIKEGSMSE-DEFIEEAKVMMNL---SHEKLVQLYGVCTKQRPIFIITEYMANG 84

Query: 202 DLADYL-VSKGTLSEDTIRIFLK 223
            L +YL   +       +    K
Sbjct: 85  CLLNYLREMRHRFQTQQLLEMCK 107

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 16/83 (19%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
           M  K+ +K+D+++ G ++++  + GK P+   +  +  ++  + L L    P   S ++ 
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR--PHLASEKVY 231

Query: 60  ELLLGLLKRNAMDRISFEQLFAH 82
            ++       A +R +F+ L ++
Sbjct: 232 TIMYSCWHEKADERPTFKILLSN 254

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (154), Expect = 1e-12
 Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 144 VAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           VA+K +          Q F  E+ +L++     H N++  +    +   + +V ++C G 
Sbjct: 33  VAVKMLNVTAPTPQQLQAFKNEVGVLRKT---RHVNILLFMGY-STAPQLAIVTQWCEGS 88

Query: 202 DLADYL-VSKGTLSEDTIRIFLK 223
            L  +L + +       +    +
Sbjct: 89  SLYHHLHIIETKFEMIKLIDIAR 111

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (148), Expect = 1e-11
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP---KVPVGTSAELKE 60
            Y  ++D+Y+ G ++++ +TG+ P+   +      +      L P   KV       +K 
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244

Query: 61  LLLGLLKRNAMDRISFEQLFAHPFLQPLA 89
           L+   LK+   +R  F Q+ A   ++ LA
Sbjct: 245 LMAECLKKKRDERPLFPQILAS--IELLA 271

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.0 bits (155), Expect = 1e-12
 Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 14/144 (9%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
            +  Y+   D +S G ++++ L G  PF  ++  +    YEK L    + P   + ++K+
Sbjct: 174 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YEKILNAELRFPPFFNEDVKD 230

Query: 61  LLLGLLKRNAMDRI-----SFEQLFAHPFLQPLAPHPL----IPEPHAGSPVTLSPEDST 111
           LL  L+ R+   R+       E +  HP+ + +    L    I  P+   P     +  T
Sbjct: 231 LLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPY--EPPIQQGQGDT 288

Query: 112 DDFVVIPNSADVVSTSPPRPSSLL 135
             F   P            P + L
Sbjct: 289 SQFDKYPEEDINYGVQGEDPYADL 312

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.9 bits (129), Expect = 4e-09
 Identities = 14/96 (14%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 142 QHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           ++ A+K + K+ + +    ++   E  +L  +    H  ++ +    +  Q ++++M++ 
Sbjct: 30  RYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV---THPFIIRMWGTFQDAQQIFMIMDYI 86

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD 234
            GG+L   L           + +     +   Y H 
Sbjct: 87  EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 5e-12
 Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 24/112 (21%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------------------------ 36
           +   Y    DL+SVG I  +    K  F  +S                            
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 37  KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL 88
           + ++ K+   + K         K+LLL  L  N   RIS     +HP+ Q L
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 3e-09
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 12/103 (11%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHC-----KESDQHVYLV 194
           + VA+KR+  +   +    +  +E+ +L+ L    H NVV L         + +  + LV
Sbjct: 34  RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLV 93

Query: 195 MEFCNGGDLADYL-VSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
            E  +         V +  +  +TI+    + Q+L+   + H 
Sbjct: 94  FEHVDQDLTTYLDKVPEPGVPTETIKDM--MFQLLRGLDFLHS 134

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 6e-12
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 142 QHVAIKRITKKNLAKT-----QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME 196
           Q VAIK+I   + ++      +   +EI +L+EL    H N++ LL       ++ LV +
Sbjct: 24  QIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL---SHPNIIGLLDAFGHKSNISLVFD 80

Query: 197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           F           +   L+   I+ ++     LQ
Sbjct: 81  FMETDLEVIIKDNSLVLTPSHIKAYML--MTLQ 111

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 1e-10
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 28/124 (22%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPFIANSP-------------------------PQLK 37
             Y    D+++VG I+ + L        +S                          P   
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 38  QYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQ--PLA-PHPLI 94
            +     + +  +      +L +L+ GL   N   RI+  Q     +    P   P   +
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQL 295

Query: 95  PEPH 98
           P P+
Sbjct: 296 PRPN 299

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.7 bits (149), Expect = 7e-12
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           S  VA+K + K++  + + F KE  ++KE+    H N+V+LL     +   Y++ EF   
Sbjct: 42  SLTVAVKTL-KEDTMEVEEFLKEAAVMKEI---KHPNLVQLLGVCTREPPFYIITEFMTY 97

Query: 201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH 233
           G+L DYL          + +     Q+     +
Sbjct: 98  GNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 1e-11
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 5   YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLG 64
           +   A ++S+G +++  + G  PF  +      Q +              S+E + L+  
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------FRQRVSSECQHLIRW 237

Query: 65  LLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPH 98
            L     DR +FE++  HP++Q +       E H
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIH 271

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 2e-11
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 142 QHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM 195
             VAIK + K  ++             E+ +LK+++      V+ LL   E      L++
Sbjct: 30  LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFSGVIRLLDWFERPDSFVLIL 88

Query: 196 EFCNGG-DLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           E      DL D++  +G L E+  R F    Q+L+
Sbjct: 89  ERPEPVQDLFDFITERGALQEELARSF--FWQVLE 121

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 1e-11
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
              AIKR+ +       ++F  E+ +L +L   HH N++ LL   E   ++YL +E+   
Sbjct: 38  MDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPH 95

Query: 201 GDLADYLVSKGTLSEDTIRIFLK 223
           G+L D+L     L  D       
Sbjct: 96  GNLLDFLRKSRVLETDPAFAIAN 118

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 8/97 (8%)

Query: 142 QHVAIKRITKKNLAKTQ---NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
             VA+K +    L++ +   +F +E+N +  L    H N++ L         + +V E  
Sbjct: 37  VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL---DHRNLIRLYGVVL-TPPMKMVTELA 92

Query: 199 NGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFHD 234
             G L D L    G     T+  +         Y   
Sbjct: 93  PLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 9e-09
 Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
            +  +   +D +  G  +++  T G+ P+I  +  Q+    +K    +P+ P     ++ 
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR-PEDCPQDIY 245

Query: 60  ELLLGLLKRNAMDRISFEQL 79
            +++        DR +F  L
Sbjct: 246 NVMVQCWAHKPEDRPTFVAL 265

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.0 bits (147), Expect = 2e-11
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 26/130 (20%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKE 60
           +S  Y+   D +++G ++++   G  PF A+ P Q+ +          + P   S++LK+
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG---KVRFPSHFSSDLKD 267

Query: 61  LLLGLLKRNAMDRI-----SFEQLFAHPFLQPL---------APHPLIPEPHAGSPVTLS 106
           LL  LL+ +   R          +  H +                P IP+          
Sbjct: 268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK-------G 320

Query: 107 PEDST--DDF 114
           P D++  DD+
Sbjct: 321 PGDTSNFDDY 330

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.4 bits (130), Expect = 3e-09
 Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
            H A+K + K+ + K +     +N  + L  ++   +V+L    + + ++Y+VME+  GG
Sbjct: 67  NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQL--YFHD 234
           ++  +L   G  SE   R +    Q++    Y H 
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAA--QIVLTFEYLHS 159

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 3e-11
 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
             VA+K +      K   +   E+ ++K +    H+N++ LL     D  +Y+++E+ + 
Sbjct: 46  TKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASK 103

Query: 201 GDLADYLVSKG 211
           G+L +YL ++ 
Sbjct: 104 GNLREYLQARR 114

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-09
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
               Y  ++D++S G ++++  T G +P+      +L +  ++        P   + EL 
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG--HRMDKPSNCTNELY 267

Query: 60  ELLLGLLKRNAMDRISFEQL 79
            ++          R +F+QL
Sbjct: 268 MMMRDCWHAVPSQRPTFKQL 287

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.9 bits (144), Expect = 3e-11
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 142 QHVAIKRITKKNLAKTQ-NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
             VA+K + ++  A  Q +F +E  ++ E     + N+V+LL      + + L+ E+   
Sbjct: 44  TMVAVKMLKEEASADMQADFQREAALMAEF---DNPNIVKLLGVCAVGKPMCLLFEYMAY 100

Query: 201 GDLADYLVSKG 211
           GDL ++L S  
Sbjct: 101 GDLNEFLRSMS 111

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 6e-09
 Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
              +Y  ++D+++ G ++++  + G  P+   +  ++  Y       +   P     EL 
Sbjct: 215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG--NILACPENCPLELY 272

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPL 88
            L+     +   DR SF  +  H  LQ +
Sbjct: 273 NLMRLCWSKLPADRPSFCSI--HRILQRM 299

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 3e-11
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 5/94 (5%)

Query: 142 QHVAIKRITK-KNLAKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCN 199
            H A+K + +  ++ +   F  E  I+K+     H NV+ LL  C  S+    +V+ +  
Sbjct: 56  IHCAVKSLNRITDIGEVSQFLTEGIIMKDF---SHPNVLSLLGICLRSEGSPLVVLPYMK 112

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH 233
            GDL +++ ++         I   L     + F 
Sbjct: 113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 146

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 2e-08
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
            + K+  K+D++S G ++++ +T G  P+   +   +  Y  +   L+   P      L 
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLY 264

Query: 60  ELLLGLLKRNAMDRISFEQLFAH 82
           E++L      A  R SF +L + 
Sbjct: 265 EVMLKCWHPKAEMRPSFSELVSR 287

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.9 bits (144), Expect = 4e-11
 Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 8/95 (8%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           + VAIK    K   K      E  I K +       +  +  C     +  +VME     
Sbjct: 33  EEVAIKLECVKT--KHPQLHIESKIYKMMQ--GGVGIPTIRWCGAEGDYNVMVMELLGPS 88

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
               +       S  T+ +     QM+    Y H 
Sbjct: 89  LEDLFNFCSRKFSLKTVLLLAD--QMISRIEYIHS 121

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.8 bits (131), Expect = 2e-09
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPV-----GTS 55
           + ++   + DL S+G ++     G  P+        +Q YE+        P+     G  
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245

Query: 56  AELKELLLGLLKRNAMDRISFE---QLFAHPFLQ 86
           +E    L         D+  +    QLF + F +
Sbjct: 246 SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.0 bits (142), Expect = 5e-11
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 144 VAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK +      K  ++F  E +I+ +     H NV+ L         V ++ EF   G 
Sbjct: 57  VAIKTLKSGYTEKQRRDFLSEASIMGQF---DHPNVIHLEGVVTKSTPVMIITEFMENGS 113

Query: 203 LADYLVSK-GTLSEDTIRIFLK 223
           L  +L    G  +   +   L+
Sbjct: 114 LDSFLRQNDGQFTVIQLVGMLR 135

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 59.1 bits (142), Expect = 7e-11
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 12/90 (13%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEFCN 199
           + V +K +      K +   +EI IL+ L      N++ L    +    +   LV E  N
Sbjct: 61  EKVVVKILKPV---KKKKIKREIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHVN 115

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
             D         TL++  IR ++   ++L+
Sbjct: 116 NTDFKQLY---QTLTDYDIRFYMY--EILK 140

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 35/121 (28%)

Query: 3   MKYDAKADLYSVGTIVFQCLTGKAPF---------------IANSPPQLKQYYEKNLVLV 47
             YD   D++S+G ++   +  K PF               +  +        + N+ L 
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264

Query: 48  PKVP--------------------VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP 87
           P+                         S E  + L  LL+ +   R++  +   HP+   
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324

Query: 88  L 88
           +
Sbjct: 325 V 325

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.4 bits (140), Expect = 1e-10
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           +  A+K+I  +   +       +EI+ILKEL    H N+V+L     + + + LV E  +
Sbjct: 27  ETFALKKIRLEKEDEGIPSTTIREISILKEL---KHSNIVKLYDVIHTKKRLVLVFEHLD 83

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
                   V +G L   T + FL   Q+L 
Sbjct: 84  QDLKKLLDVCEGGLESVTAKSFLL--QLLN 111

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 55.7 bits (133), Expect = 7e-10
 Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 26/111 (23%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------------------------- 36
           S KY    D++SVG I  + + G   F   S                             
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234

Query: 37  -KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQ 86
              +     +       G      +LL  +LK +   RI+ +Q   H + +
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 1e-10
 Identities = 29/137 (21%), Positives = 45/137 (32%), Gaps = 30/137 (21%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------------------------ 36
            S  Y    D++SVG I+ + L+ +  F                                
Sbjct: 186 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 245

Query: 37  ----KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHP 92
                    KN V   ++     ++  +LL  +L  N   RI  EQ  AHP+L+    + 
Sbjct: 246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY--YD 303

Query: 93  LIPEPHAGSPVTLSPED 109
              EP A +P     E 
Sbjct: 304 PSDEPIAEAPFKFDMEL 320

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-08
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 11/88 (12%)

Query: 142 QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLVM 195
             VAIK+I+        Q   +EI IL       HEN++ +     +      + VYLV 
Sbjct: 34  VRVAIKKISPFEHQTYCQRTLREIKILL---RFRHENIIGINDIIRAPTIEQMKDVYLVT 90

Query: 196 EFCNGGDLADYLVSKGTLSEDTIRIFLK 223
               G DL   L     LS D I  FL 
Sbjct: 91  HLM-GADLYKLL-KTQHLSNDHICYFLY 116

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 140 PSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC 198
           P   VAIK + +    +    F  E +++KE    +  +VV LL      Q   ++ME  
Sbjct: 49  PETRVAIKTVNEAASMRERIEFLNEASVMKEF---NCHHVVRLLGVVSQGQPTLVIMELM 105

Query: 199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD 234
             GDL  YL S      +   +       +     +
Sbjct: 106 TRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 141

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 2e-10
 Identities = 17/93 (18%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
           +  ++  K+D++S G ++ +  T G+ P+      ++    E+        P      L 
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--YRMPCPPECPESLH 244

Query: 60  ELLLGLLKRNAMDRISFEQLFA--HPFLQPLAP 90
           +L+    ++   +R +FE L A    +     P
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 8e-09
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 9/96 (9%)

Query: 141 SQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG 200
           +  VAIK + K      + F +E  ++K+L    HE +V+L      +  +Y+V E+ + 
Sbjct: 41  TTRVAIKTL-KPGTMSPEAFLQEAQVMKKL---RHEKLVQLYAVVSEE-PIYIVTEYMSK 95

Query: 201 GDLADYLVSKGTLS---EDTIRIFLKLHQMLQLYFH 233
           G L D+L  +          + +  ++   +  Y  
Sbjct: 96  GSLLDFLKGETGKYLRLPQLVDMAAQIASGMA-YVE 130

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 2e-10
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 17/107 (15%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQ------HVYL 193
             VAIK++ +   ++   +   +E+ +LK +    HENV+ LL     D+        YL
Sbjct: 44  AKVAIKKLYRPFQSELFAKRAYRELRLLKHM---RHENVIGLLDVFTPDETLDDFTDFYL 100

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHDFTPW 238
           VM F   G     L+    L ED I+  +   QML+   Y H     
Sbjct: 101 VMPFM--GTDLGKLMKHEKLGEDRIQFLVY--QMLKGLRYIHAAGII 143

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 2e-10
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 28/124 (22%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP------------- 48
            M+Y    D++SVG I+ + +TGK  F  +      +   K     P             
Sbjct: 193 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252

Query: 49  ---------------KVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
                           +    S     LL  +L  +A  R++  +  AHP+ + L     
Sbjct: 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 312

Query: 94  IPEP 97
            P+ 
Sbjct: 313 EPQV 316

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 3e-10
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 27/124 (21%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--------------------KQYY 40
            +  Y +  D++S G ++ + L G+  F  +S                          Y 
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255

Query: 41  EKNLVLVPKVPV------GTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLI 94
           E     +   P        T  E   L   LL+     R++  +  AH F   L   P +
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL-RDPNV 314

Query: 95  PEPH 98
             P+
Sbjct: 315 KLPN 318

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 5e-10
 Identities = 21/104 (20%), Positives = 49/104 (47%), Gaps = 20/104 (19%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHC------KESDQHVYLVM 195
           + VAIK++ +      +   +E+ I+++L    H N+V L +       K+ + ++ LV+
Sbjct: 46  ELVAIKKVLQDK----RFKNRELQIMRKL---DHCNIVRLRYFFYSSGEKKDEVYLNLVL 98

Query: 196 EFCNGG---DLADYLVSKGTLSEDTIRIFLKLHQMLQ--LYFHD 234
           ++           Y  +K TL    ++++  ++Q+ +   Y H 
Sbjct: 99  DYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAYIHS 140

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 3e-10
 Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 144 VAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK           + F +E   +++     H ++V+L+    ++  V+++ME C  G+
Sbjct: 38  VAIKTCKNCTSDSVREKFLQEALTMRQF---DHPHIVKLIGV-ITENPVWIIMELCTLGE 93

Query: 203 LADYLVSK-GTLSEDTIRIFLK 223
           L  +L  +  +L   ++ ++  
Sbjct: 94  LRSFLQVRKYSLDLASLILYAY 115

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 7e-10
 Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 3/114 (2%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELK 59
           +   Y  ++D++S G  V++ +T G  P+      ++    EK        P   + ++ 
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER--LPQPPICTIDVY 243

Query: 60  ELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEPHAGSPVTLSPEDSTDD 113
            +++     +A  R  F +L          P   +           SP DS   
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFY 297

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 5e-07
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 4/81 (4%)

Query: 144 VAIKRITKKNLAKT-QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK + +    K  +    E  ++  +    + +V  LL    +     +      G  
Sbjct: 41  VAIKELREATSPKANKEILDEAYVMASV---DNPHVCRLLGICLTSTVQLITQLMPFGCL 97

Query: 203 LADYLVSKGTLSEDTIRIFLK 223
           L      K  +    +  +  
Sbjct: 98  LDYVREHKDNIGSQYLLNWCV 118

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 4/93 (4%)

Query: 142 QHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG 201
           Q VAIK   +++         E    K L       +  + +  +   H  LV++     
Sbjct: 31  QQVAIKFEPRRS--DAPQLRDEYRTYKLLA--GCTGIPNVYYFGQEGLHNVLVIDLLGPS 86

Query: 202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHD 234
                 +     S  T+ +  K         H+
Sbjct: 87  LEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 119

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 5/84 (5%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPV-----GTS 55
           +  +   + DL ++G +    L G  P+        KQ YE+        P+     G  
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP 245

Query: 56  AELKELLLGLLKRNAMDRISFEQL 79
            E  + +             ++ L
Sbjct: 246 EEFYKYMHYARNLAFDATPDYDYL 269

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 3e-09
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 144 VAIKRITKKNLAKTQ-NFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGD 202
           VAIK +      K + +F  E  I+ +     H N++ L       + + ++ E+   G 
Sbjct: 39  VAIKTLKAGYTEKQRVDFLGEAGIMGQF---SHHNIIRLEGVISKYKPMMIITEYMENGA 95

Query: 203 LADYLVSK-GTLSEDTIRIFLKLHQMLQLYFHD 234
           L  +L  K G  S   +   L+       Y  +
Sbjct: 96  LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 128

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-09
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 13/92 (14%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHC--------KESDQHV 191
           Q VA+K++  +N  +       +EI IL+ L    HENVV L+                +
Sbjct: 36  QKVALKKVLMENEKEGFPITALREIKILQLL---KHENVVNLIEICRTKASPYNRCKGSI 92

Query: 192 YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 223
           YLV +FC               +   I+  ++
Sbjct: 93  YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 124

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 1e-08
 Identities = 18/114 (15%), Positives = 29/114 (25%), Gaps = 29/114 (25%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKV---------- 50
              Y    DL+  G I+ +  T       N+   QL    +    + P+V          
Sbjct: 196 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 255

Query: 51  ------------------PVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQ 86
                                      +L+  LL  +   RI  +    H F  
Sbjct: 256 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 6e-09
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 30/121 (24%)

Query: 4   KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL--------------------------K 37
            Y    D++S+G I  + +T +A F  +S                               
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238

Query: 38  QYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPLIPEP 97
            + +       KV      + + LL  +L  +   RIS +   AHPF Q +   P+   P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV-TKPV---P 294

Query: 98  H 98
           H
Sbjct: 295 H 295

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 1e-07
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+K+I      +       +EI++LKEL   +H N+V+LL    ++  +YLV EF +
Sbjct: 28  EVVALKKIRLDTETEGVPSTAIREISLLKEL---NHPNIVKLLDVIHTENKLYLVFEFLH 84

Query: 200 GG--DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH------DFTPWSFVI 242
                  D     G           +L Q L           D  P + +I
Sbjct: 85  QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 6e-09
 Identities = 22/117 (18%), Positives = 34/117 (29%), Gaps = 27/117 (23%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPF---------------------------IANSP 33
            +  Y    D++S G I  +      P                            +   P
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234

Query: 34  PQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP 90
                        +  V    +A  ++LL  LLK N + RIS E+   HP+     P
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 1e-07
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN 199
           + VA+KR+   +  +    +  +EI +LKEL    H+N+V L     SD+ + LV EFC+
Sbjct: 28  EIVALKRVRLDDDDEGVPSSALREICLLKEL---KHKNIVRLHDVLHSDKKLTLVFEFCD 84

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
                 +    G L  + ++ FL   Q+L+
Sbjct: 85  QDLKKYFDSCNGDLDPEIVKSFLF--QLLK 112

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 6e-09
 Identities = 28/143 (19%), Positives = 50/143 (34%), Gaps = 33/143 (23%)

Query: 2   SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL-----------------------KQ 38
            M Y+   D++SVG I+ + LTG+  F                                +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252

Query: 39  YYEKNLVLVPKVP-----VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPHPL 93
            Y ++L  +PK+      +G +    +LL  +L  ++  RI+  Q  AH +      H  
Sbjct: 253 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY--HDP 310

Query: 94  IPEPHAGSPVTLSPEDSTDDFVV 116
             EP             + D ++
Sbjct: 311 DDEP---VADPYDQSFESRDLLI 330

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 6e-06
 Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 10/95 (10%)

Query: 142 QHVAIKRITKK--NLAKTQNFGKEINILKELTELHHENVVELLHC-----KESDQHVYLV 194
             VA+K++++   ++   +   +E+ +LK +    HENV+ LL          + +   +
Sbjct: 44  LRVAVKKLSRPFQSIIHAKRTYRELRLLKHM---KHENVIGLLDVFTPARSLEEFNDVYL 100

Query: 195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQ 229
           +    G DL + +  +    +    +  ++ + L+
Sbjct: 101 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 142 QHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLH-CKESDQHVYLVMEFCN 199
           + VA+K + +    ++ +    E+ IL      HH NVV LL  C +    + +++EFC 
Sbjct: 44  RTVAVKMLKEGATHSEHRALMSELKILIH--IGHHLNVVNLLGACTKPGGPLMVIVEFCK 101

Query: 200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFHDFTPWSFVILYTISI 248
            G+L+ YL SK          F+      +  + DF     +I Y+  +
Sbjct: 102 FGNLSTYLRSKR-------NEFVPYKVAPEDLYKDFLTLEHLICYSFQV 143

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.3 bits (111), Expect = 6e-07
 Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 45/142 (31%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPF-------------------------------- 28
           +   +   AD++S   ++F+ +TG   F                                
Sbjct: 202 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 261

Query: 29  -------------IANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS 75
                        + N         E  L    K     + E+ + L  +L+ +   R  
Sbjct: 262 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 321

Query: 76  FEQLFAHPFLQPLAPHPLIPEP 97
              L  HP+L+       I  P
Sbjct: 322 AGGLVNHPWLKDTLGMEEIRVP 343

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 8e-07
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 14/90 (15%)

Query: 142 QHVAIKRITKKNLAKT--QNFGKEINILKELTELHHENVVELLHC------KESDQHVYL 193
           ++VAIK++++    +T  +   +E+ ++K +   +H+N++ LL+        E  Q VYL
Sbjct: 43  RNVAIKKLSRPFQNQTHAKRAYRELVLMKCV---NHKNIISLLNVFTPQKTLEEFQDVYL 99

Query: 194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLK 223
           VME  +          +  L  + +   L 
Sbjct: 100 VMELMDANLCQVI---QMELDHERMSYLLY 126

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 20/140 (14%), Positives = 40/140 (28%), Gaps = 43/140 (30%)

Query: 1   MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQL------------------------ 36
           + M Y    D++SVG I+ + +  K  F                                
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250

Query: 37  ---------------KQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA 81
                          K + +       +     +++ ++LL  +L  +   RIS +    
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310

Query: 82  HPFLQ----PLAPHPLIPEP 97
           HP++     P       P+ 
Sbjct: 311 HPYINVWYDPAEVEAPPPQI 330

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.93
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.93
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.93
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.93
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.93
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.92
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.92
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.92
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.91
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.91
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.9
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.9
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.9
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.89
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.89
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.89
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.88
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.88
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.88
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.88
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.87
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.87
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.87
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.86
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.86
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.86
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.86
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.86
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.85
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.85
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.85
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.85
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.84
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.84
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.84
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.84
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.84
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.83
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.83
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.83
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.83
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.83
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.83
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.82
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.82
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.82
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.82
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.82
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.82
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.82
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.81
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.81
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.81
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.81
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.81
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.81
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.81
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.8
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.8
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.8
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.8
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.79
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.79
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.78
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.77
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.77
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.76
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.76
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.75
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.75
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.75
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.74
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.74
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.74
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.73
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.72
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.71
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.7
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.7
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.69
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.69
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.68
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.68
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.68
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.68
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.68
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.68
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.67
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.66
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.66
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.66
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.65
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.65
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.65
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.65
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.62
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.61
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.6
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.59
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.59
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.56
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.56
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.52
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.44
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.35
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.34
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.44
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.45
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.52

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=182.08  Aligned_cols=120  Identities=19%  Similarity=0.302  Sum_probs=110.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++........+.+.+|+.+++.++   |||||+++++|.+.+.+|+|||||+||
T Consensus        26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~ivmEy~~gg  102 (293)
T d1yhwa1          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK---NPNIVNYLDSYLVGDELWVVMEYLAGG  102 (293)
T ss_dssp             EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCC---CCCEeeEeEEEEECCEEEEEEEecCCC
Confidence            57899999999999999999999999998766555677899999999887   999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.++ .+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus       103 ~L~~~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~  152 (293)
T d1yhwa1         103 SLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD  152 (293)
T ss_dssp             BHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             cHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCC
Confidence            999988765 5999999999999999999999       999999999643

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-27  Score=183.92  Aligned_cols=121  Identities=26%  Similarity=0.397  Sum_probs=107.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||++.+..+++.||+|++......+ .+.+.+|+.+++.++   |||||++++++.+...+|+|||||+|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~~~~~~~~~~~~~ivmEy~~g   87 (271)
T d1nvra_          11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN---HENVVKFYGHRREGNIQYLFLEYCSG   87 (271)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCC---CTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCC---CCCEeeEeeeeccCceeEEEEeccCC
Confidence            56889999999999999999999999998654332 356889999998877   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++.+++.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        88 g~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~  139 (271)
T d1nvra_          88 GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER  139 (271)
T ss_dssp             EEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCC
Confidence            999999988888999999999999999999999       999999999653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-26  Score=178.86  Aligned_cols=121  Identities=19%  Similarity=0.264  Sum_probs=109.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+....+   .+.+.+|+.+++.++   |||||++++++.+.+.+|+|||||
T Consensus        12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~ivmEy~   88 (263)
T d2j4za1          12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR---HPNILRLYGYFHDATRVYLILEYA   88 (263)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC---CCCCCeEEEEEEECCEEEEEEeec
Confidence            46889999999999999999999999998654322   345778998888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++.+++.++.|++.|+.|||       |+||+||||..+
T Consensus        89 ~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~  142 (263)
T d2j4za1          89 PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA  142 (263)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCC
Confidence            99999999999888999999999999999999999       999999999754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.93  E-value=1.4e-26  Score=186.06  Aligned_cols=120  Identities=20%  Similarity=0.285  Sum_probs=109.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....+.+.+.+|+.+++.++   |||||++++++.+.+.+|+|||||+||
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~ivmE~~~gg  108 (350)
T d1koaa2          32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR---HPTLVNLHDAFEDDNEMVMIYEFMSGG  108 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTC---CTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            56899999999999999999999999998765555567889999999887   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+ .+.+++.+++.++.|++.||.|||       |+||+|||+..
T Consensus       109 ~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~  159 (350)
T d1koaa2         109 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT  159 (350)
T ss_dssp             BHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             CHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc
Confidence            99999964 457999999999999999999999       99999999964

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.93  E-value=1.1e-26  Score=186.85  Aligned_cols=120  Identities=18%  Similarity=0.257  Sum_probs=108.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+....+.+.+.+|+.+++.++   |||||+++++|.+.+.+|+|||||+||
T Consensus        35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~---HpnIv~~~~~~~~~~~~~ivmE~~~gg  111 (352)
T d1koba_          35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH---HPKLINLHDAFEDKYEMVLILEFLSGG  111 (352)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC---STTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            57899999999999999999999999998765555567788999988776   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.+ .+++.+++.++.|++.||.|||       |+||+||||..
T Consensus       112 ~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~  162 (352)
T d1koba_         112 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET  162 (352)
T ss_dssp             BHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             hHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc
Confidence            9999887654 6999999999999999999999       99999999964

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=182.96  Aligned_cols=119  Identities=18%  Similarity=0.230  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|.+.+.... ...+.+|+.+++.++   |||||+++++|.+.+.+|+|||||+||
T Consensus        11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~-~~~~~~Ei~il~~l~---HpnIv~~~~~~~~~~~~~lvmE~~~gg   86 (321)
T d1tkia_          11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR---HRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH-HHHHHHHHHHHHHSC---CTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEcCCccc-HHHHHHHHHHHHhCC---CCCCCeEEEEEEECCEEEEEEecCCCC
Confidence            5789999999999999999999999999765432 356789999998877   999999999999999999999999999


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.++|.+++ .+++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus        87 ~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~  137 (321)
T d1tkia_          87 DIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT  137 (321)
T ss_dssp             BHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC
Confidence            9999998765 6999999999999999999999       99999999964

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=180.28  Aligned_cols=121  Identities=21%  Similarity=0.334  Sum_probs=110.3

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++........+.+.+|+.+++.++   |||||++++++.+.+.+|+|||||+||
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~~lvmEy~~~g   94 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD---HPNIVKLLDAFYYENNLWILIEFCAGG   94 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCC---CTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEeeCCeEEEEEecCCCC
Confidence            56889999999999999999999999998765555577899999999887   999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++.+ .+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        95 ~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~  146 (288)
T d2jfla1          95 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD  146 (288)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCC
Confidence            99999876 456999999999999999999999       999999999643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.2e-26  Score=179.52  Aligned_cols=121  Identities=27%  Similarity=0.416  Sum_probs=109.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....      .+.+.+|+.+++.++   |||||+++++|.+...+||||
T Consensus        16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~iv~   92 (293)
T d1jksa_          16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ---HPNVITLHEVYENKTDVILIL   92 (293)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC---CTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEE
Confidence            56899999999999999999999999998653322      245789999999887   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+||+|.+++.+++.+++..++.++.|++.|+.|||       |+||+|||+...
T Consensus        93 E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~  149 (293)
T d1jksa_          93 ELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR  149 (293)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS
T ss_pred             EcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecC
Confidence            99999999999999888999999999999999999999       999999999654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2.8e-26  Score=181.29  Aligned_cols=120  Identities=31%  Similarity=0.424  Sum_probs=105.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+..... ...+.+|+.+++.++   |||||++++++.+.+.+|+|||||+|
T Consensus        15 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~lvmE~~~g   91 (307)
T d1a06a_          15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK---HPNIVALDDIYESGGHLYLIMQLVSG   91 (307)
T ss_dssp             EESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCC---CTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEeccCC
Confidence            56889999999999999999999999998754333 355778999998876   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+|.+++.+++.+++.+++.++.|++.|+.|||       |+||+|||+..
T Consensus        92 g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~  142 (307)
T d1a06a_          92 GELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS  142 (307)
T ss_dssp             CBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred             CcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecc
Confidence            999999999888999999999999999999999       99999999964

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-26  Score=183.02  Aligned_cols=121  Identities=17%  Similarity=0.165  Sum_probs=108.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||++.+..+++.||+|++....... .+.+.+|+.+++.++   |||||+++++|.+...+|+|||||+|
T Consensus        12 ~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~iVmEy~~g   88 (322)
T d1s9ja_          12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN---SPYIVGFYGAFYSDGEISICMEHMDG   88 (322)
T ss_dssp             EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCC---CTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            57899999999999999999999999997653222 356778888888776   99999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeec
Q psy4166         201 GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~  245 (249)
                      |+|.+++.+++.+++..++.++.|++.|+.|||        |+||+||||...
T Consensus        89 g~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~  141 (322)
T d1s9ja_          89 GSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR  141 (322)
T ss_dssp             EEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT
T ss_pred             CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCC
Confidence            999999999888999999999999999999999        999999999654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.4e-26  Score=178.51  Aligned_cols=121  Identities=21%  Similarity=0.359  Sum_probs=109.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....+   .+.+.+|+.+++.++   |||||+++++|.+...+|+|||||
T Consensus        14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~~~~~~~~~~~ivmEy~   90 (288)
T d1uu3a_          14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD---HPFFVKLYFTFQDDEKLYFGLSYA   90 (288)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC---STTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC---CCCeeEEEEEEEECCEEEEEEEcc
Confidence            56789999999999999999999999998654322   245788999988876   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        91 ~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~  144 (288)
T d1uu3a_          91 KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED  144 (288)
T ss_dssp             TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             CCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCC
Confidence            99999999999889999999999999999999999       999999999653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.92  E-value=1.7e-25  Score=174.24  Aligned_cols=122  Identities=22%  Similarity=0.348  Sum_probs=109.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---------TQNFGKEINILKELTELHHENVVELLHCKESDQHVY  192 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~  192 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+.....         .+.+.+|+.+++.++  .|||||++++++.+++.+|
T Consensus         9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~hpnIv~~~~~~~~~~~~~   86 (277)
T d1phka_           9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS--GHPNIIQLKDTYETNTFFF   86 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT--TCTTBCCEEEEEECSSEEE
T ss_pred             eEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEeecccCcceE
Confidence            56889999999999999999999999998754322         134678888888875  4999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         193 LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       193 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||||+||+|.++|+.++.+++.+++.++.|++.|+.|||       |+||+|||+..+
T Consensus        87 ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~  146 (277)
T d1phka_          87 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD  146 (277)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             EEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCC
Confidence            99999999999999999989999999999999999999999       999999999643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-25  Score=178.68  Aligned_cols=121  Identities=18%  Similarity=0.224  Sum_probs=108.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+.....   .+.+.+|+.+++.++   |||||+++++|.+...+|+|||||
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~---hp~Iv~l~~~~~~~~~~~iv~ey~   87 (337)
T d1o6la_          11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFLTALKYAFQTHDRLCFVMEYA   87 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC---CCCEEEEEeeeccccccccceecc
Confidence            56889999999999999999999999998764322   245678888887776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.++|..++.++.|++.|+.|||       |+||+||||...
T Consensus        88 ~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~  141 (337)
T d1o6la_          88 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD  141 (337)
T ss_dssp             TTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             CCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCC
Confidence            99999999999999999999999999999999999       999999999643

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-25  Score=173.50  Aligned_cols=119  Identities=23%  Similarity=0.283  Sum_probs=105.6

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEEe
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVME  196 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e  196 (249)
                      .+|.|++|.||++.+..++..||+|.+.......  .+.+.+|+++++.++   |||||+++++|.+    ...+|+|||
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          16 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEeeccccCCEEEEEEe
Confidence            5799999999999999999999999998654332  356788999888776   9999999999875    456999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------d~kp~nili~~  244 (249)
                      ||+||+|.+++.+.+.+++.+++.++.|++.|+.|||         |+||+||||..
T Consensus        93 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~  149 (270)
T d1t4ha_          93 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG  149 (270)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS
T ss_pred             CCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC
Confidence            9999999999999888999999999999999999999         89999999953

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.7e-25  Score=175.73  Aligned_cols=122  Identities=22%  Similarity=0.257  Sum_probs=108.8

Q ss_pred             cccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         121 ADVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       121 ~~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      +..+|.|++|.||++.+..+++.||+|++......+   .+.+.+|+.+++.++   |||||++++++.+...+|+||||
T Consensus        20 l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR---HPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC---CCCEeeEEEEEEECCEEEEEEEe
Confidence            356899999999999999999999999998754433   245778888888776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+||+|..++..++.+++.+++.++.|++.||.|||       |+||+||||..+
T Consensus        97 ~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~  151 (309)
T d1u5ra_          97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP  151 (309)
T ss_dssp             CSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT
T ss_pred             cCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC
Confidence            999999888888888999999999999999999999       999999999754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=4.5e-25  Score=178.27  Aligned_cols=123  Identities=16%  Similarity=0.160  Sum_probs=110.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+.....   ...+.+|..+++.++.++|||||+++++|.+.+.+|+|||||
T Consensus        10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~   89 (364)
T d1omwa3          10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM   89 (364)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEec
Confidence            56899999999999999999999999998654322   234667777788877778999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.++|.+++.+++.+++.++.|++.|+.|||       |+||+||||..
T Consensus        90 ~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~  142 (364)
T d1omwa3          90 NGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE  142 (364)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS
T ss_pred             CCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcC
Confidence            99999999999888999999999999999999999       99999999964

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=3.8e-25  Score=173.26  Aligned_cols=119  Identities=21%  Similarity=0.270  Sum_probs=107.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++.+..+++.||+|++..+.. ..+.+.+|+.+++.++   |||||++++++.+.+.+|+|||||++|
T Consensus        23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~iv~E~~~~g   98 (287)
T d1opja_          23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIK---HPNLVQLLGVCTREPPFYIITEFMTYG   98 (287)
T ss_dssp             EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eEEeeCCCeEEEEEEECCCCeEEEEEEECCccc-hHHHHHHHHHHHHhCC---CCCEecCCccEeeCCeeEEEeecccCc
Confidence            468999999999999988999999999976543 3367889999999887   999999999999999999999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++.+.  ..+++..+..++.|++.||.|||       |+||+||||..
T Consensus        99 ~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~  150 (287)
T d1opja_          99 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE  150 (287)
T ss_dssp             BHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             chHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC
Confidence            999999764  46899999999999999999999       99999999964

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=172.21  Aligned_cols=121  Identities=17%  Similarity=0.194  Sum_probs=106.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHH-HhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILK-ELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~-~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+.+.+|..++. .+.   |||||++++++.+...+|+||||
T Consensus         8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~---hp~Iv~~~~~~~~~~~~yivmEy   84 (320)
T d1xjda_           8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE---HPFLTHMFCTFQTKENLFFVMEY   84 (320)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTT---CTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCC---CCcEEEEEEEEccCCceeEEEee
Confidence            4678999999999999999999999999865322   2244566776655 344   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+||+|.+++...+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        85 ~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~  139 (320)
T d1xjda_          85 LNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD  139 (320)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             cCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCC
Confidence            999999999999888999999999999999999999       999999998654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=9.7e-25  Score=170.35  Aligned_cols=121  Identities=19%  Similarity=0.256  Sum_probs=106.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccch---hcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKT---QNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv  194 (249)
                      ..+|.|.+|.||++.+..+++.||+|+++++...+.   +.+.+|+.+++.++   |||||++++++.+..    .+|+|
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~---hpniv~~~~~~~~~~~~~~~~~lv   89 (277)
T d1o6ya_          13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN---HPAIVAVYDTGEAETPAGPLPYIV   89 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC---CCCCCcccceeeeccCCCceEEEE
Confidence            568899999999999999999999999987644332   45778888888776   999999999987643    48999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||+||+|.+++...+.+++.+++.++.|++.|+.|||       |+||+|||+...
T Consensus        90 mE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~  147 (277)
T d1o6ya_          90 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT  147 (277)
T ss_dssp             EECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             EECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcc
Confidence            999999999999999889999999999999999999999       999999999654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.7e-24  Score=171.62  Aligned_cols=121  Identities=17%  Similarity=0.293  Sum_probs=108.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc---chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA---KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....   ..+.+.+|+.+++.++   |||||++++++.+.+.+|+|||||
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~ivmE~~   86 (316)
T d1fota_          10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT---HPFIIRMWGTFQDAQQIFMIMDYI   86 (316)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC---BTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc---CcChhheeeeEeeCCeeeeEeeec
Confidence            5678999999999999999999999999865332   2355778888888776   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++...+.+++..++.++.|++.|+.|||       |+||+||||..+
T Consensus        87 ~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~  140 (316)
T d1fota_          87 EGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN  140 (316)
T ss_dssp             CSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT
T ss_pred             CCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCC
Confidence            99999999999988999999999999999999999       999999999653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-24  Score=173.81  Aligned_cols=115  Identities=17%  Similarity=0.281  Sum_probs=101.5

Q ss_pred             cccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe----CCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES----DQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~----~~~~~lv~e~~  198 (249)
                      .+|.|.+|.||++.+..+++.||+|+++..     ..+.+|+.++..+.  +|||||+++++|.+    ..++|+|||||
T Consensus        19 ~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~--~hpnIv~l~~~~~~~~~~~~~~~ivmEy~   91 (335)
T d2ozaa1          19 VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRAS--QCPHIVRIVDVYENLYAGRKCLLIVMECL   91 (335)
T ss_dssp             EEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHT--TSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             EeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhc--CCCCCCeEEEEEeecccCCCEEEEEEECC
Confidence            479999999999999999999999998643     45678998875543  49999999999976    46799999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         199 NGGDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       199 ~~g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +||+|.++|.+++  .++|.+++.++.|++.|+.|||       |+||+|||+..
T Consensus        92 ~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~  146 (335)
T d2ozaa1          92 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS  146 (335)
T ss_dssp             CSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred             CCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccc
Confidence            9999999998753  6999999999999999999999       99999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=168.98  Aligned_cols=121  Identities=21%  Similarity=0.350  Sum_probs=102.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~  197 (249)
                      ..+|.|++|.||++.+..+++.||+|.+......+  .+.+.+|+.+++.++   |||||++++++.+  ...+|+||||
T Consensus        10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~~~ivmEy   86 (269)
T d2java1          10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK---HPNIVRYYDRIIDRTNTTLYIVMEY   86 (269)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCC---CTTBCCEEEEEEC----CEEEEEEC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCC---CCCEeeEEEEEEeCCCCEEEEEEec
Confidence            56789999999999999999999999998764332  345778888887766   9999999999865  4569999999


Q ss_pred             cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHhh------------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVS----KGTLSEDTIRIFLKLHQMLQLYFH------------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~ylh------------d~kp~nili~~~  245 (249)
                      |+||+|.+++.+    ++.+++..++.++.|++.|+.|||            |+||+||||...
T Consensus        87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~  150 (269)
T d2java1          87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK  150 (269)
T ss_dssp             CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTT
T ss_pred             CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC
Confidence            999999999975    356999999999999999999997            899999999654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=6.9e-24  Score=170.38  Aligned_cols=121  Identities=23%  Similarity=0.350  Sum_probs=108.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|.+|.||++.+..+++.||+|++.+....+   .+.+.+|+.+++.++   |||||++++++.+...+|+||||+
T Consensus        47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~~v~e~~  123 (350)
T d1rdqe_          47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN---FPFLVKLEFSFKDNSNLYMVMEYV  123 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC---CCcEeecccccccccccccccccc
Confidence            57899999999999999999999999998654332   245678888887766   999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      .||+|.+++.+.+.+++.+++.++.|++.||.|||       |+||+||||...
T Consensus       124 ~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~  177 (350)
T d1rdqe_         124 AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ  177 (350)
T ss_dssp             TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             cccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCC
Confidence            99999999999889999999999999999999999       999999999643

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.2e-24  Score=166.47  Aligned_cols=119  Identities=17%  Similarity=0.231  Sum_probs=100.4

Q ss_pred             cccCCCCcceeeccC--CCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         123 VVSTSPPRPSSLLLS--PAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~--~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      .+|.|.+|.||++..  ..+++.||+|++.......  .+.+.+|+.+++.++   |||||++++++.+ +..|||||||
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~---HpnIv~~~g~~~~-~~~~lvmE~~   89 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD---NPYIVRMIGICEA-ESWMLVMEMA   89 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC---CTTBCCEEEEEES-SSEEEEEECC
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC---CCCCceEEEEecc-CCEEEEEEcC
Confidence            478999999999863  4466789999997543222  356889999998776   9999999999865 4578999999


Q ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.+++.+.+.+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus        90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~  143 (277)
T d1xbba_          90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ  143 (277)
T ss_dssp             TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET
T ss_pred             CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccccc
Confidence            99999999999888999999999999999999999       999999999753

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.3e-24  Score=171.46  Aligned_cols=121  Identities=21%  Similarity=0.261  Sum_probs=103.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc-----hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK-----TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|.+|.||++.+..+++.||+|+++......     .+.+.+|+.+++.++   |||||++++++.+.+++|+|||
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS---HPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC---CTTBCCEEEEECCTTCCEEEEE
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC---CCCEeEEEeeeccCCceeehhh
Confidence            46788999999999999999999999997643322     245789999998887   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||.|+++..+...++.+++.+++.++.|++.||.|||       |+||+|||+..+
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~  136 (299)
T d1ua2a_          81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN  136 (299)
T ss_dssp             CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCC
Confidence            9999888777776778999999999999999999999       999999999654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-23  Score=162.35  Aligned_cols=119  Identities=21%  Similarity=0.269  Sum_probs=104.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++... ++..||+|+++..... .+.+.+|+.+++.++   |||||++++++.+.+.+|+|||||++|
T Consensus        11 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~-~~~~~~E~~~l~~l~---HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_          11 QEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS---HPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEECCSSCCEEEEEET-TTEEEEEEECCSSSSC-HHHHHHHHHHHHHCC---CTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             EEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCc-HHHHHHHHHHHHhcC---CCCcccccceeccCCceEEEEEecCCC
Confidence            46899999999999764 5678999999765433 367889999999887   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++... ..+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        86 ~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~  137 (263)
T d1sm2a_          86 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN  137 (263)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGG
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCC
Confidence            999998765 45889999999999999999999       999999999753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.6e-23  Score=162.51  Aligned_cols=119  Identities=20%  Similarity=0.300  Sum_probs=100.4

Q ss_pred             cccCCCCcceeeccCC--CCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         123 VVSTSPPRPSSLLLSP--APSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       123 ~~~~g~~~~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ++|.|++|.||.+...  ..+..||||++...... ..+.+.+|+.+++.++   |||||++++++.+ +.+|+|||||+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~g~~~~-~~~~lvmE~~~   91 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD---NPYIVRLIGVCQA-EALMLVMEMAG   91 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC---CTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCC---CCCEeeEeeeecc-CeEEEEEEeCC
Confidence            4799999999998654  34557999999764322 2366889999998887   9999999999875 46899999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++... +.+++.++..++.|++.||.|||       |+||+||||...
T Consensus        92 ~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~  145 (285)
T d1u59a_          92 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR  145 (285)
T ss_dssp             TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccC
Confidence            99999998754 56999999999999999999999       999999999754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1e-23  Score=165.99  Aligned_cols=120  Identities=19%  Similarity=0.267  Sum_probs=101.9

Q ss_pred             ccccCCCCcceeeccCCCCCC---eeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ---HVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~---~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||++....+++   .||+|.+...... ..+.+.+|+.+++.++   |||||++++++.+.+.+|+||||
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~iv~Ey  108 (299)
T d1jpaa_          32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD---HPNVIHLEGVVTKSTPVMIITEF  108 (299)
T ss_dssp             EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC---CCCCccEEEEEeeCCEEEEEEEe
Confidence            468999999999998766654   5888888654322 2356889999988776   99999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |+||+|.+++... +.+++.++..++.|++.||.|||       |+||+||||..
T Consensus       109 ~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~  163 (299)
T d1jpaa_         109 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS  163 (299)
T ss_dssp             CTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             cCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECC
Confidence            9999999998875 46999999999999999999999       99999999964

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.9e-23  Score=162.21  Aligned_cols=120  Identities=23%  Similarity=0.331  Sum_probs=99.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..+++.||+|++......+  .+.+.+|+++++.++   |||||+++++|.+...+|+|||||.
T Consensus         8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~---Hp~Iv~~~~~~~~~~~~~iv~e~~~   84 (298)
T d1gz8a_           8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN---HPNIVKLLDVIHTENKLYLVFEFLH   84 (298)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC---CCcEEEeccccccccceeEEEeecC
Confidence            56788999999999999999999999997654322  356788999988776   9999999999999999999999997


Q ss_pred             CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVS--KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      + ++.+++..  .+.+++.+++.++.|++.|+.|||       |+||+|||+..+
T Consensus        85 ~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~  138 (298)
T d1gz8a_          85 Q-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE  138 (298)
T ss_dssp             E-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             C-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeeccc
Confidence            5 55555543  346999999999999999999999       999999998643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.4e-23  Score=157.38  Aligned_cols=118  Identities=18%  Similarity=0.235  Sum_probs=104.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|++|.||++.. .+++.||+|.+++.... .+.+.+|+.+++.++   ||||+++++++.+.+.+|+||||+++|
T Consensus        10 ~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~-~~~~~~Ev~~~~~l~---HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_          10 KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLS---HEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCEETTEEEEEEEE-TTTEEEEEEEEESSSSC-HHHHHHHHHHHHTCC---CTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             EEEecCCCeEEEEEEE-CCCCEEEEEEECcCcCC-HHHHHHHHHHHHhcC---CCceeeEEEEEeeCCceEEEEEccCCC
Confidence            4678899999999987 47788999999875543 367889999998887   999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++... ..+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~  135 (258)
T d1k2pa_          85 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND  135 (258)
T ss_dssp             EHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT
T ss_pred             cHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcC
Confidence            999997764 56899999999999999999999       99999999965

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.7e-23  Score=158.47  Aligned_cols=121  Identities=21%  Similarity=0.241  Sum_probs=107.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc------hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK------TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.+..+++.||+|++.+....+      ...+.+|+.+++.++ ..|||||++++++.+.+.+|+||
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-~~h~nIv~~~~~~~~~~~~~lv~   88 (273)
T d1xwsa_          10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS-SGFSGVIRLLDWFERPDSFVLIL   88 (273)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHC-SSSCSBCCEEEEEECSSEEEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhc-cCCCCccEEEEEEeeCCeEEEEE
Confidence            46788999999999999999999999998654322      234679999999875 24899999999999999999999


Q ss_pred             eccCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeee
Q psy4166         196 EFCNG-GDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVIL  243 (249)
Q Consensus       196 e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~  243 (249)
                      ||+.+ +++.+++.+++.+++.+++.++.|++.|+.|||       |+||+|||+.
T Consensus        89 e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~  144 (273)
T d1xwsa_          89 ERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID  144 (273)
T ss_dssp             ECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             EeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe
Confidence            99976 688999998888999999999999999999999       9999999996

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.3e-22  Score=161.62  Aligned_cols=121  Identities=23%  Similarity=0.334  Sum_probs=100.4

Q ss_pred             ccccCCCCcceeeccCCCCC-----CeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS-----QHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|.+|.||.+.....+     ..||+|.+..... .....+.+|+.++..+.  +|||||++++++.+.+.+|+||
T Consensus        43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--~HpnIv~l~~~~~~~~~~~lv~  120 (325)
T d1rjba_          43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG--SHENIVNLLGACTLSGPIYLIF  120 (325)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc--CCCcEeEEEEEEeeCCeEEEEE
Confidence            46799999999998765443     3689999865432 22356889999998873  4999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG-----------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||+||+|.++|+.++                       .+++.++..++.|++.|+.|||       |+||+|||+..
T Consensus       121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~  199 (325)
T d1rjba_         121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  199 (325)
T ss_dssp             ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccccc
Confidence            9999999999997652                       3889999999999999999999       99999999854

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.9e-22  Score=158.48  Aligned_cols=121  Identities=24%  Similarity=0.316  Sum_probs=108.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..+++.||+|+++.....+  ...+.+|+.+++.++   ||||+++++++.+....+++||++.
T Consensus         8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~---h~niv~~~~~~~~~~~~~iv~~~~~   84 (292)
T d1unla_           8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK---HKNIVRLHDVLHSDKKLTLVFEFCD   84 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEEEEECCS
T ss_pred             eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC---cCCEEeeccccccccceeEEeeecc
Confidence            56788999999999999999999999997654332  256778898888776   9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |++|..++...+.+++..++.++.|++.||.|||       |+||+||||..+
T Consensus        85 ~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~  137 (292)
T d1unla_          85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN  137 (292)
T ss_dssp             EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             ccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccC
Confidence            9999999988888999999999999999999999       999999999754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6.6e-23  Score=159.30  Aligned_cols=118  Identities=17%  Similarity=0.286  Sum_probs=100.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|++|.||.+... ++..||||++..... ..+.+.+|+.+++.++   |||||++++++.+ +.+|+|||||++|
T Consensus        19 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~---HpnIv~~~g~~~~-~~~~iv~Ey~~~g   92 (272)
T d1qpca_          19 ERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQ---HQRLVRLYAVVTQ-EPIYIITEYMENG   92 (272)
T ss_dssp             EEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred             EEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC-CHHHHHHHHHHHHhCC---CCCEeEEEeeecc-CCeEEEEEeCCCC
Confidence            46899999999999864 577899999976443 3367899999999887   9999999998754 5679999999999


Q ss_pred             CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|.+++....  .+++.++..++.|++.|+.|||       |+||+||||...
T Consensus        93 ~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~  145 (272)
T d1qpca_          93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT  145 (272)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecc
Confidence            9999876542  5999999999999999999999       999999999643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-22  Score=158.17  Aligned_cols=117  Identities=15%  Similarity=0.179  Sum_probs=98.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++..   +..||||+++......  .+.+.+|+.+++.++   |||||++++++. ...+|+|||||+
T Consensus        14 ~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~~~~~~~-~~~~~lv~Ey~~   86 (276)
T d1uwha_          14 QRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR---HVNILLFMGYST-APQLAIVTQWCE   86 (276)
T ss_dssp             SEEEECSSCEEEEEES---SSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC---CTTBCCEEEEEC-SSSCEEEEECCC
T ss_pred             EEEeeCCCcEEEEEEE---CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC---CCCEeeeeEEEe-ccEEEEEEecCC
Confidence            4678999999999864   3469999997653322  356788888888776   999999999865 456899999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||+|.+++... +.+++.++..++.|++.|+.|||       |+||+||||...
T Consensus        87 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~  140 (276)
T d1uwha_          87 GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED  140 (276)
T ss_dssp             EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC
Confidence            99999999764 56999999999999999999999       999999999643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.87  E-value=9.7e-23  Score=159.65  Aligned_cols=120  Identities=23%  Similarity=0.243  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+. +++.||+|+++.....+  .+.+.+|+.+++.++   |||||+++++|.+.+..|++|||+.
T Consensus         8 ~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~~~~~~~~~~~~~i~~e~~~   83 (286)
T d1ob3a_           8 EKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELK---HSNIVKLYDVIHTKKRLVLVFEHLD   83 (286)
T ss_dssp             EEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC---CTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             cEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC---CCcEEeeeeecccCCceeEEEEeeh
Confidence            56889999999999774 78999999997654322  356778888887776   9999999999999999999999998


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ++.+..+....+.+++..++.++.|++.||.|||       |+||+||||..+
T Consensus        84 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~  136 (286)
T d1ob3a_          84 QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE  136 (286)
T ss_dssp             EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             hhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCC
Confidence            8887777777788999999999999999999999       999999999654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.7e-22  Score=157.41  Aligned_cols=121  Identities=17%  Similarity=0.243  Sum_probs=104.2

Q ss_pred             ccccCCCCcceeecc-----CCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLL-----SPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~-----~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|++|.||.+.     +..+++.||+|++...... ....+.+|+.+++.+.  +|||||++++++.+...+|+||
T Consensus        29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~--~HpnIv~~~g~~~~~~~~~lvm  106 (311)
T d1t46a_          29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG--NHMNIVNLLGACTIGGPTLVIT  106 (311)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc--CCCCEEEEEEEEeeCCEEEEEE
Confidence            468999999999885     3456789999999765432 2356788999998874  5999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++|+|.+++.+..                  .+++..+..++.|++.|+.|||       |+||+||++..
T Consensus       107 E~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~  180 (311)
T d1t46a_         107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (311)
T ss_dssp             ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             EcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccc
Confidence            9999999999998653                  4899999999999999999999       99999999853

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.7e-22  Score=155.21  Aligned_cols=118  Identities=19%  Similarity=0.232  Sum_probs=101.2

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|.+|.||++....+ ..||+|++..... ..+.+.+|+.+++.++   |||||++++++.+ +..|+|||||++|
T Consensus        23 ~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~-~~~~~~~E~~~l~~l~---h~nIv~~~g~~~~-~~~~lv~Ey~~~g   96 (285)
T d1fmka3          23 VKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLR---HEKLVQLYAVVSE-EPIYIVTEYMSKG   96 (285)
T ss_dssp             EEEEECSSCEEEEEEETTT-EEEEEEECCTTSS-CHHHHHHHHHHHHHCC---CTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             eEEeeCCCeEEEEEEECCC-CEEEEEEECcccC-CHHHHHHHHHHHHhcc---cCCEeEEEEEEec-CCeEEEEEecCCC
Confidence            4689999999999987554 5799999976543 3467899999998877   9999999999854 5689999999999


Q ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         202 DLADYLVSK--GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       202 ~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|..++...  +.+++.++..++.|++.|+.|||       |+||+||||...
T Consensus        97 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~  149 (285)
T d1fmka3          97 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN  149 (285)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             chhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCC
Confidence            999998753  46999999999999999999999       999999999653

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.86  E-value=6.1e-22  Score=158.02  Aligned_cols=116  Identities=20%  Similarity=0.261  Sum_probs=101.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--CCeEEEEEeccC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES--DQHVYLVMEFCN  199 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--~~~~~lv~e~~~  199 (249)
                      ..+|.|.+|.||++.+..+++.||+|++....   .+.+.+|+.+++.++  +||||++++++|..  ...+|+|||||+
T Consensus        41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~--~hpnIv~~~~~~~~~~~~~~~~v~e~~~  115 (328)
T d3bqca1          41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLR--GGPNIITLADIVKDPVSRTPALVFEHVN  115 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHT--TSTTBCCEEEEEECTTTCSEEEEEECCC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhcc--CCCCCcEEEEEEEecCCCceeEEEeecC
Confidence            56899999999999999999999999996532   356789999999885  59999999999984  456999999999


Q ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         200 GGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       200 ~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+|.++.   +.+++.+++.++.|++.||.|||       |+||+||||...
T Consensus       116 ~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~  165 (328)
T d3bqca1         116 NTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE  165 (328)
T ss_dssp             SCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             CCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCC
Confidence            99997754   35999999999999999999999       999999999753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.2e-22  Score=156.26  Aligned_cols=122  Identities=17%  Similarity=0.269  Sum_probs=108.0

Q ss_pred             ccccCCCCcceeeccC---CCCCCeeEEEEeeccccc----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS---PAPSQHVAIKRITKKNLA----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~---~~~~~~vavK~~~~~~~~----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv  194 (249)
                      ..+|.|.+|.||++.+   ..+++.||+|.+++....    ..+.+.+|+.+++.++  +||||+++++++.+...+|++
T Consensus        30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~--h~pnIv~~~~~~~~~~~~~~v  107 (322)
T d1vzoa_          30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR--QSPFLVTLHYAFQTETKLHLI  107 (322)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH--TCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc--CCCeEEEeeeeeccCCceeee
Confidence            5789999999999865   457899999999765322    2356789999999998  348999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||.||+|.+++...+.+++..++.++.|++.|+.|+|       |+||+||||...
T Consensus       108 ~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~  165 (322)
T d1vzoa_         108 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN  165 (322)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             eecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCC
Confidence            999999999999999988999999999999999999999       999999999764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.5e-22  Score=156.43  Aligned_cols=122  Identities=24%  Similarity=0.325  Sum_probs=102.9

Q ss_pred             ccccCCCCcceeeccCCCCCC--eeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEecc
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ--HVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFC  198 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~--~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~  198 (249)
                      ..+|.|++|.||.+....++.  .||+|++..... ...+.+.+|+.+++.+.  +|||||++++++.+.+.+|+|||||
T Consensus        16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--~HpnIv~~~~~~~~~~~~~iV~ey~   93 (309)
T d1fvra_          16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG--HHPNIINLLGACEHRGYLYLAIEYA   93 (309)
T ss_dssp             EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC--CCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc--CCCCEeeEEEEEecCCeeEEEEEec
Confidence            468999999999998877776  467788764322 23467889999998773  4999999999999999999999999


Q ss_pred             CCCCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         199 NGGDLADYLVSK----------------GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       199 ~~g~L~~~l~~~----------------~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||+|.++|.++                ..+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        94 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~  163 (309)
T d1fvra_          94 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN  163 (309)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG
T ss_pred             CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC
Confidence            999999999754                46899999999999999999999       999999998765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.8e-22  Score=155.30  Aligned_cols=122  Identities=18%  Similarity=0.286  Sum_probs=98.0

Q ss_pred             ccccCCCCcceeeccCCCC-------CCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAP-------SQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~-------~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~l  193 (249)
                      ..+|.|++|.||++....+       +..||+|++.+..... ...+.+|+..+..+.  +|||||++++++.+....|+
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~--~HpnIv~~~~~~~~~~~~~~   96 (299)
T d1fgka_          19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KHKNIINLLGACTQDGPLYV   96 (299)
T ss_dssp             EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc--CCCeEEecccccccCCeEEE
Confidence            4678999999999875443       3479999997654322 356778888887774  49999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||||++|+|.++|..++                .+++.++..++.|++.|+.|||       |+||+|||+...
T Consensus        97 v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~  171 (299)
T d1fgka_          97 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED  171 (299)
T ss_dssp             EECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             EEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC
Confidence            999999999999997653                4899999999999999999999       999999998654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.8e-22  Score=155.78  Aligned_cols=117  Identities=25%  Similarity=0.327  Sum_probs=98.9

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEEEeccCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLVMEFCNG  200 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv~e~~~~  200 (249)
                      ..+|.|.+|.||++..  .+..||+|+++++.  ..+.+.+|+.+++.++   ||||+++++++.+ ...+|+||||+++
T Consensus        13 ~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~---HpnIv~~~g~~~~~~~~~~lv~ey~~~   85 (262)
T d1byga_          13 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLR---HSNLVQLLGVIVEEKGGLYIVTEYMAK   85 (262)
T ss_dssp             EEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCC---CTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred             EEEecCCCeEEEEEEE--CCeEEEEEEECcHH--HHHHHHHHHHHHHhCC---CCCEeeEEEEEEecCCcEEEEEeccCC
Confidence            4578999999999876  47789999997543  2366889999988776   9999999998854 5678999999999


Q ss_pred             CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         201 GDLADYLVSKG--TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       201 g~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|.+++.+++  .+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        86 g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~  139 (262)
T d1byga_          86 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED  139 (262)
T ss_dssp             EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCC
Confidence            99999997654  4899999999999999999999       999999998754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.9e-22  Score=159.39  Aligned_cols=116  Identities=19%  Similarity=0.204  Sum_probs=96.6

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKES------DQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~~lv~  195 (249)
                      .++|.|.+|.||++.+..+++.||+|++.+..    ....+|+.+++.++   ||||++++++|..      ..++|+||
T Consensus        26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~---h~niv~~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLD---HCNIVRLRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCC---CTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred             eEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcC---CCCCCcEEEEEEecCccCCceEEEEEE
Confidence            56899999999999999999999999997643    33457999998876   9999999999854      34689999


Q ss_pred             eccCCCCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYL---VSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l---~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++|.+..+.   .....+++.+++.++.|++.||.|||       |+||+||||..
T Consensus        99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~  157 (350)
T d1q5ka_          99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP  157 (350)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT
T ss_pred             eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec
Confidence            999765433332   23456999999999999999999999       99999999964

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.9e-22  Score=158.46  Aligned_cols=119  Identities=26%  Similarity=0.391  Sum_probs=96.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC------eEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESDQ------HVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~------~~~l  193 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+....+  .+.+.+|+.+++.++   |||||+++++|...+      ++|+
T Consensus        24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---hpniv~l~~~~~~~~~~~~~~~~~l  100 (346)
T d1cm8a_          24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR---HENVIGLLDVFTPDETLDDFTDFYL  100 (346)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC---BTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC---CCCeeEEEEEeccCccccccceEEE
Confidence            57899999999999999999999999997643322  356788999998877   999999999997654      5799


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||||| |++|..+++.. .+++..++.+++|++.||.|||       |+||+|||+...
T Consensus       101 v~e~~-~~~l~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~  157 (346)
T d1cm8a_         101 VMPFM-GTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED  157 (346)
T ss_dssp             EEECC-SEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             EEecc-cccHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccc
Confidence            99999 66888777654 5999999999999999999999       999999999654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=9.6e-22  Score=157.82  Aligned_cols=119  Identities=27%  Similarity=0.304  Sum_probs=98.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC-----eEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKESDQ-----HVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~-----~~~lv~  195 (249)
                      ..+|.|.+|.||++.+..+++.||||++.+.... ..+.+.+|+.+++.++   ||||+++++++....     .+|++ 
T Consensus        14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~---hp~iv~~~~~~~~~~~~~~~~~~l~-   89 (345)
T d1pmea_          14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR---HENIIGINDIIRAPTIEQMKDVYLV-   89 (345)
T ss_dssp             EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCC---CTTBCCCCEEECCSSTTTCCCEEEE-
T ss_pred             EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcC---CCCCCcEEEEEeeccccccceEEEE-
Confidence            6789999999999999999999999999764322 2356788999999887   999999999987643     35555 


Q ss_pred             eccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +|+.||+|.+++..+ .+++..++.++.|++.|+.|||       |+||+||||...
T Consensus        90 ~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~  145 (345)
T d1pmea_          90 THLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT  145 (345)
T ss_dssp             EECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             EeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCC
Confidence            556699999999866 5999999999999999999999       999999999754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.3e-22  Score=158.83  Aligned_cols=120  Identities=18%  Similarity=0.287  Sum_probs=101.4

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeC-----CeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKESD-----QHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~-----~~~~lv  194 (249)
                      ..+|.|++|.||++.+..+++.||+|++.+.....  .+.+.+|+.+++.++   |||||++++++...     ...+++
T Consensus        24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---h~~iv~~~~~~~~~~~~~~~~~~~i  100 (348)
T d2gfsa1          24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK---HENVIGLLDVFTPARSLEEFNDVYL  100 (348)
T ss_dssp             EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC---CCCeeeEEEEEeeccccccCceEEE
Confidence            57899999999999999999999999997653322  245778999998887   99999999998643     234566


Q ss_pred             EeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         195 MEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||+.||+|.+++..+ .+++.+++.++.|++.||.|||       |+||+|||+...
T Consensus       101 ~~~~~gg~L~~~~~~~-~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~  157 (348)
T d2gfsa1         101 VTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED  157 (348)
T ss_dssp             EEECCSEEHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             EEeecCCchhhhcccc-cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccc
Confidence            6777899999999765 5999999999999999999999       999999999654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.4e-21  Score=152.59  Aligned_cols=121  Identities=19%  Similarity=0.238  Sum_probs=102.3

Q ss_pred             ccccCCCCcceeeccCCCCC----CeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS----QHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~----~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|++|.||.+....++    ..||||++....... ...+.+|+.+++.++   |||||++++++.+....|+|||
T Consensus        13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~---H~nIv~~~g~~~~~~~~~~v~e   89 (283)
T d1mqba_          13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS---HHNIIRLEGVISKYKPMMIITE   89 (283)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSEEEEEE
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcC---CCCEeeeeEEEecCCceEEEEE
Confidence            46799999999998765443    469999997543322 345789999998876   9999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      ||.+|++.+++... +.+++.++..++.|++.|+.|||       |+||+||||...
T Consensus        90 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~  146 (283)
T d1mqba_          90 YMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN  146 (283)
T ss_dssp             CCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred             ecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCC
Confidence            99999999988765 56999999999999999999999       999999999643

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.6e-21  Score=152.00  Aligned_cols=124  Identities=16%  Similarity=0.179  Sum_probs=101.9

Q ss_pred             ccccCCCCcceeeccCCCC-CCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-----CCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAP-SQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES-----DQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-----~~~~~l  193 (249)
                      ..+|.|.+|.||++.+..+ ++.||+|++......+  ...+.+|+.+++.++..+||||++++++|..     ...+|+
T Consensus        13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~   92 (305)
T d1blxa_          13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL   92 (305)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred             EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEE
Confidence            5788999999999988655 6679999997654332  3457799999998877789999999999853     357999


Q ss_pred             EEeccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         194 VMEFCNGGDLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      +||||++|++...... .+.+++..++.++.|++.||.|||       |+||+|||+...
T Consensus        93 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~  152 (305)
T d1blxa_          93 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS  152 (305)
T ss_dssp             EEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             EEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCC
Confidence            9999988776554443 345999999999999999999999       999999998653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.3e-21  Score=149.76  Aligned_cols=120  Identities=17%  Similarity=0.301  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCCC---CCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAP---SQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~  197 (249)
                      ..+|.|.+|.||.+.+..+   +..||+|.+....... .+.+.+|+.+++.++   |||||++++++. .+.+|+||||
T Consensus        13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~-~~~~~iv~E~   88 (273)
T d1mp8a_          13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD---HPHIVKLIGVIT-ENPVWIIMEL   88 (273)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEe-cCeEEEEEEe
Confidence            4688999999999876543   3568888886543222 356888999988776   999999999986 4678999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |++|+|.+++... +.+++..+..++.|++.|+.|||       |+||+||++...
T Consensus        89 ~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~  144 (273)
T d1mp8a_          89 CTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN  144 (273)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET
T ss_pred             ccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCC
Confidence            9999999987764 46999999999999999999999       999999998653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.8e-21  Score=154.88  Aligned_cols=119  Identities=20%  Similarity=0.295  Sum_probs=98.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe------CCeEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES------DQHVYL  193 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~------~~~~~l  193 (249)
                      ..+|.|.+|.||++.+..+++.||||++.+.....  .+.+.+|+.+++.++   |||||+++++|..      ..++|+
T Consensus        23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~~~~~f~~~~~~~~~~~~~i   99 (355)
T d2b1pa1          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYL   99 (355)
T ss_dssp             EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC---CTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC---CCCeeEEEEEEecccccccCceeEE
Confidence            57899999999999999999999999998654322  245778999988876   9999999999964      468999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeecc
Q psy4166         194 VMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYTI  246 (249)
Q Consensus       194 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~~  246 (249)
                      |||||.| ++.+.+.  +.+++..++.+++|++.|+.|||       |+||+|||+....
T Consensus       100 v~Ey~~~-~l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~  156 (355)
T d2b1pa1         100 VMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  156 (355)
T ss_dssp             EEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             EEeccch-HHHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccc
Confidence            9999965 5555553  35999999999999999999999       9999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.7e-21  Score=151.06  Aligned_cols=90  Identities=27%  Similarity=0.352  Sum_probs=77.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHH---
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQ---   78 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~---   78 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+..++...+...   .+..|..+++++++||.+||+.||.+|||++|   
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL---EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT---CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             cCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC---CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            568999999999999999999999999998887776555443   33456789999999999999999999999876   


Q ss_pred             ---HhcCCCCCCCCCCCCC
Q psy4166          79 ---LFAHPFLQPLAPHPLI   94 (249)
Q Consensus        79 ---i~~~~~~~~~~~~~~~   94 (249)
                         +++||||..++|..+.
T Consensus       261 ~~~i~~Hpff~~i~w~~l~  279 (288)
T d1uu3a_         261 YGPLKAHPFFESVTWENLH  279 (288)
T ss_dssp             HHHHHTSGGGTTCCCTTGG
T ss_pred             CHHHHcCCccCCCCHHHhh
Confidence               6889999999887654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.8e-21  Score=152.70  Aligned_cols=121  Identities=21%  Similarity=0.252  Sum_probs=99.8

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccc--hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe--------CCeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAK--TQNFGKEINILKELTELHHENVVELLHCKES--------DQHV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~--------~~~~  191 (249)
                      ..+|.|.+|.||++.+..+++.||||++......+  ...+.+|+.+++.++   ||||+++++.+..        ...+
T Consensus        16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~---h~nii~~~~~~~~~~~~~~~~~~~~   92 (318)
T d3blha1          16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK---HENVVNLIEICRTKASPYNRCKGSI   92 (318)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC---CTTBCCEEEEEEC----------CE
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc---CCCccceEeeeecccccccccCceE
Confidence            67899999999999999999999999987653332  355789999998887   9999999998855        4568


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         192 YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+|||||.++.+..+....+.+++..++.++.|++.|+.|||       |+||+|||+..+
T Consensus        93 ~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~  153 (318)
T d3blha1          93 YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD  153 (318)
T ss_dssp             EEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             EEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCC
Confidence            999999988776666555667999999999999999999999       999999999754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=5.5e-21  Score=150.54  Aligned_cols=121  Identities=20%  Similarity=0.264  Sum_probs=103.9

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|++|.||++...     .+++.||+|++......+ .+.+.+|+.+++.++   ||||+++++++.+....+++|
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~---h~niv~~~~~~~~~~~~~~v~   95 (301)
T d1lufa_          19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD---NPNIVKLLGVCAVGKPMCLLF   95 (301)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcC---CCCcccceeeeccCCceEEEE
Confidence            56899999999998643     456789999997643332 356889999998876   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG------------------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~------------------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||+++|+|.+++...+                        .+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~  175 (301)
T d1lufa_          96 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGE  175 (301)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECC
Confidence            9999999999997542                        3788999999999999999999       99999999975


Q ss_pred             c
Q psy4166         245 T  245 (249)
Q Consensus       245 ~  245 (249)
                      .
T Consensus       176 ~  176 (301)
T d1lufa_         176 N  176 (301)
T ss_dssp             G
T ss_pred             C
Confidence            3

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.6e-20  Score=148.91  Aligned_cols=120  Identities=15%  Similarity=0.151  Sum_probs=98.0

Q ss_pred             ccccCCCCcceeeccCCCCCC----eeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQ----HVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ..+|.|++|.||.+....+++    .||+|.+..... ...+.+.+|+.+++.++   |||||++++++.+. ..+++||
T Consensus        15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~-~~~~v~e   90 (317)
T d1xkka_          15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD---NPHVCRLLGICLTS-TVQLITQ   90 (317)
T ss_dssp             EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCC---CTTBCCEEEEEESS-SEEEEEE
T ss_pred             eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEecC-CeeEEEE
Confidence            578999999999998777765    578887764322 22356889999999887   99999999999865 5678889


Q ss_pred             ccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         197 FCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       197 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |+.+|+|.+++..+ ..+++..+..++.|++.|+.|||       |+||+||||...
T Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~  147 (317)
T d1xkka_          91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  147 (317)
T ss_dssp             CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             eccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCC
Confidence            99999999988875 46999999999999999999999       999999999653

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.5e-21  Score=151.34  Aligned_cols=86  Identities=26%  Similarity=0.339  Sum_probs=74.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+..........+..+++++++||.+||+.||.+|||++++++
T Consensus       189 ~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         189 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             TSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            45799999999999999999999999999888776655555544444556678999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||..
T Consensus       269 hp~~~~  274 (288)
T d2jfla1         269 HPFVTV  274 (288)
T ss_dssp             SGGGCC
T ss_pred             CcccCC
Confidence            999974

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3e-21  Score=151.07  Aligned_cols=86  Identities=23%  Similarity=0.381  Sum_probs=73.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++||||+||++|||++|++||.+.+.......+..........+..+++++++||.+||+.||.+|||+.++++
T Consensus       190 ~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             SSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            57899999999999999999999999998887665554444444444556778999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||+.
T Consensus       270 Hp~~~~  275 (293)
T d1yhwa1         270 HQFLKI  275 (293)
T ss_dssp             CGGGGG
T ss_pred             CHhhCC
Confidence            999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4e-21  Score=148.23  Aligned_cols=82  Identities=27%  Similarity=0.449  Sum_probs=72.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++|||||||++|||++|+.||.+.+..++...+...   .+..|..+++++++||.+||+.||.+|||++++++
T Consensus       178 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         178 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            678999999999999999999999999998887776655443   33456779999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      ||||.
T Consensus       255 hp~~~  259 (263)
T d2j4za1         255 HPWIT  259 (263)
T ss_dssp             CHHHH
T ss_pred             CcCcC
Confidence            99986

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.9e-21  Score=146.52  Aligned_cols=82  Identities=26%  Similarity=0.488  Sum_probs=72.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      +.+|+.++|||||||++|||++|++||.+.+..++...+....  .+..|..+++++.+||.+||+.||.+|||++++++
T Consensus       188 ~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         188 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            5689999999999999999999999999988887766655433  23456789999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          82 HPFL   85 (249)
Q Consensus        82 ~~~~   85 (249)
                      |||+
T Consensus       266 hp~i  269 (269)
T d2java1         266 NPLI  269 (269)
T ss_dssp             STTC
T ss_pred             CCcC
Confidence            9995

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.1e-20  Score=146.67  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=91.4

Q ss_pred             ccccCCCCcceeeccCCC-C--CCeeEEEEeecccccc---hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSPA-P--SQHVAIKRITKKNLAK---TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~-~--~~~vavK~~~~~~~~~---~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|++|.||++.... +  ...||+|++.+....+   .+.+.+|+.+++.++   |||||++++++.+ ...|+||
T Consensus        14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~~~g~~~~-~~~~lv~   89 (273)
T d1u46a_          14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD---HRNLIRLYGVVLT-PPMKMVT   89 (273)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC---CTTBCCEEEEECS-SSCEEEE
T ss_pred             EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC---CCCEEEEEEEEee-cchheee
Confidence            467899999999986432 2  3468999987653322   256788998888876   9999999999976 4678999


Q ss_pred             eccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeeec
Q psy4166         196 EFCNGGDLADYLVSK-GTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILYT  245 (249)
Q Consensus       196 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~~  245 (249)
                      |||++|+|.+++..+ +.+++..+..++.|++.|+.|||       |+||+|||+...
T Consensus        90 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~  147 (273)
T d1u46a_          90 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR  147 (273)
T ss_dssp             ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET
T ss_pred             eeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc
Confidence            999999999987764 46999999999999999999999       999999998653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.2e-20  Score=148.49  Aligned_cols=121  Identities=21%  Similarity=0.269  Sum_probs=96.5

Q ss_pred             ccccCCCCcceeeccC-----CCCCCeeEEEEeeccccc-chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEE
Q psy4166         122 DVVSTSPPRPSSLLLS-----PAPSQHVAIKRITKKNLA-KTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLV  194 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~-----~~~~~~vavK~~~~~~~~-~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv  194 (249)
                      ..+|.|++|.||.+..     ..+++.||+|.+...... ..+.+.+|...+..+.  +|+||+.+++++.. ...+|+|
T Consensus        19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~--~h~~iv~~~~~~~~~~~~~~iv   96 (299)
T d1ywna1          19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG--HHLNVVNLLGACTKPGGPLMVI   96 (299)
T ss_dssp             EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC--CCTTBCCEEEEECSTTSCCEEE
T ss_pred             eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc--CCCeEEEeeeeeccCCCeEEEE
Confidence            5688999999998864     345678999998754322 2355677777777665  59999999998765 4569999


Q ss_pred             EeccCCCCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         195 MEFCNGGDLADYLVSKG----------------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       195 ~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||||++|+|.+++..++                .+++.++..++.|++.|+.|||       |+||+||||..
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~  169 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  169 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECC
Confidence            99999999999997642                3889999999999999999999       99999999964

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.82  E-value=4.7e-21  Score=154.52  Aligned_cols=91  Identities=29%  Similarity=0.526  Sum_probs=77.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +..|+.++||||+||++|||++|+.||.+.+...............+..|..+++++++||.+||++||.+|++     +
T Consensus       180 ~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a  259 (364)
T d1omwa3         180 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA  259 (364)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTH
T ss_pred             CCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCH
Confidence            45799999999999999999999999988766555455555555566677889999999999999999999999     7


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++||||+++.|..
T Consensus       260 ~eil~Hp~f~~i~~~~  275 (364)
T d1omwa3         260 QEVKESPFFRSLDWQM  275 (364)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHHcCccccCCCHHH
Confidence            9999999999887653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.6e-21  Score=149.93  Aligned_cols=91  Identities=21%  Similarity=0.379  Sum_probs=73.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++||||+||++|||++|+.||.+.+..+....+....... ...+..+|+++++||++||..||.+|||+++++
T Consensus       190 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil  269 (293)
T d1jksa_         190 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL  269 (293)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            5679999999999999999999999999998887766554443222 223356899999999999999999999999999


Q ss_pred             cCCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPHP   92 (249)
Q Consensus        81 ~~~~~~~~~~~~   92 (249)
                      +||||+...+..
T Consensus       270 ~hp~~~~~~~~~  281 (293)
T d1jksa_         270 QHPWIKPKDTQQ  281 (293)
T ss_dssp             HSTTTCC-----
T ss_pred             cCcccCCCChhH
Confidence            999999765544

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=1.5e-20  Score=148.16  Aligned_cols=86  Identities=22%  Similarity=0.359  Sum_probs=73.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-LVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+..... .....+..+|+++.+||.+||++||.+|||+++++
T Consensus       183 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil  262 (307)
T d1a06a_         183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL  262 (307)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHh
Confidence            57899999999999999999999999999888777665544332 22344567899999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||+.
T Consensus       263 ~hp~~~~  269 (307)
T d1a06a_         263 QHPWIAG  269 (307)
T ss_dssp             HSTTTTS
T ss_pred             cCHhhCC
Confidence            9999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2e-20  Score=147.72  Aligned_cols=120  Identities=16%  Similarity=0.161  Sum_probs=99.1

Q ss_pred             ccccCCCCcceeeccCCCCC---CeeEEEEeecccc-cchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEe-CCeEEEEEe
Q psy4166         122 DVVSTSPPRPSSLLLSPAPS---QHVAIKRITKKNL-AKTQNFGKEINILKELTELHHENVVELLHCKES-DQHVYLVME  196 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~-~~~~~lv~e  196 (249)
                      .++|.|++|.||.+....++   ..||||++++... ...+.+.+|+.+++.++   |||||++++++.. ....|+|||
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS---HPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCC---CTTBCCCCEEEEETTTEEEEEEE
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC---CCCEeEEeEEEEecCCceEEEEE
Confidence            35799999999998765433   3689999975322 22366889999998876   9999999999765 568999999


Q ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         197 FCNGGDLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       197 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      ||++|+|.+++.... .+++..+..++.|++.|+.|||       |+||+||||..
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~  165 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE  165 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECC
Confidence            999999999998654 4778889999999999999999       99999999954

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.82  E-value=9.3e-20  Score=142.88  Aligned_cols=118  Identities=20%  Similarity=0.168  Sum_probs=104.7

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|++|.||++.+..+++.||+|++....  +...+.+|+++++.++  +|+|++.+++++......|+||||+ ||
T Consensus        11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~--~~~~i~~~~~~~~~~~~~~~vme~~-~~   85 (293)
T d1csna_          11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA--GCTGIPNVYYFGQEGLHNVLVIDLL-GP   85 (293)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTT--TCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhc--CCCCCCEEEEEeecCCccEEEEEec-CC
Confidence            46789999999999999999999999886543  2356788999999887  4699999999999999999999999 78


Q ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVSKG-TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+++...+ .+++.++..++.|++.|+.|||       |+||+||||..
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~  136 (293)
T d1csna_          86 SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGR  136 (293)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECC
T ss_pred             CHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecC
Confidence            9999998754 6999999999999999999999       99999999964

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.2e-21  Score=147.70  Aligned_cols=83  Identities=25%  Similarity=0.431  Sum_probs=67.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      .+|+.++||||+||++|||++|+.||.+.... .+...+... ..++..+...++++++||.+||..||++|||++|+++
T Consensus       187 ~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         187 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT-CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcC-CCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            46999999999999999999999999876543 333333322 2223345568899999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          82 HPFLQ   86 (249)
Q Consensus        82 ~~~~~   86 (249)
                      ||||+
T Consensus       266 Hp~fk  270 (270)
T d1t4ha_         266 HAFFQ  270 (270)
T ss_dssp             SGGGC
T ss_pred             CcccC
Confidence            99985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.3e-20  Score=146.92  Aligned_cols=117  Identities=16%  Similarity=0.232  Sum_probs=94.5

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCC----eEEEEEec
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQ----HVYLVMEF  197 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~----~~~lv~e~  197 (249)
                      ..+|.|.+|.||++..  +++.||+|++..+..   +.+.+|..++ .+..++|||||++++++.+.+    .+|+||||
T Consensus         9 ~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~---~~~~~e~ei~-~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           9 ESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIY-QTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEECCSSSEEEEEEE--TTEEEEEEEECGGGH---HHHHHHHHHH-TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEE--CCEEEEEEEECccch---hHHHHHHHHH-HHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            3578999999999874  688999999965432   3344454433 233356999999999997643    68999999


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh---------------cCCccceeeeec
Q psy4166         198 CNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH---------------DFTPWSFVILYT  245 (249)
Q Consensus       198 ~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh---------------d~kp~nili~~~  245 (249)
                      |++|+|.+++++.+ +++..+..++.|++.|+.|+|               |+||+||||..+
T Consensus        83 ~~~g~L~~~l~~~~-l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~  144 (303)
T d1vjya_          83 HEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  144 (303)
T ss_dssp             CTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT
T ss_pred             ccCCCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC
Confidence            99999999998764 999999999999999999997               799999999543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.5e-20  Score=147.13  Aligned_cols=88  Identities=28%  Similarity=0.306  Sum_probs=71.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC------------------------CCCCCCCCHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV------------------------PKVPVGTSAE   57 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~   57 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..+....+......+                        ...+..+++.
T Consensus       189 ~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  268 (305)
T d1blxa_         189 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDEL  268 (305)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHH
T ss_pred             CCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHH
Confidence            6789999999999999999999999999988766544432211100                        0123457899


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +.+||.+||++||.+|||+.++++||||+++.
T Consensus       269 ~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         269 GKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            99999999999999999999999999999764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.5e-21  Score=150.15  Aligned_cols=88  Identities=24%  Similarity=0.464  Sum_probs=76.5

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHH-HH
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFE-QL   79 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~i   79 (249)
                      ++.+|+.++||||+||++|||++|+.||.+.+..++...+...   .+..|..+++++.+||.+||..||.+||++. ++
T Consensus       176 ~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l  252 (320)
T d1xjda_         176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD---NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI  252 (320)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred             cCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHH
Confidence            3678999999999999999999999999999988876655543   3455677899999999999999999999985 89


Q ss_pred             hcCCCCCCCCCC
Q psy4166          80 FAHPFLQPLAPH   91 (249)
Q Consensus        80 ~~~~~~~~~~~~   91 (249)
                      ++||||+++.+.
T Consensus       253 ~~hpff~~~~~~  264 (320)
T d1xjda_         253 RQHPLFREINWE  264 (320)
T ss_dssp             GGSGGGTTCCHH
T ss_pred             HhCchhccCCHH
Confidence            999999987654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.9e-20  Score=144.50  Aligned_cols=88  Identities=18%  Similarity=0.213  Sum_probs=69.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC--------------------C-----CCCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK--------------------V-----PVGTSA   56 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------~-----~~~~~~   56 (249)
                      +..|+.++||||+||++|||++|.+||.+.+..+....+......+..                    .     ...+++
T Consensus       175 ~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  254 (299)
T d1ua2a_         175 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGD  254 (299)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCH
T ss_pred             CCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCH
Confidence            356899999999999999999999999998887665444332111100                    0     124688


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++.+||.+||++||++|||++|+++||||++..
T Consensus       255 ~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         255 DLLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence            999999999999999999999999999998543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.8e-20  Score=148.01  Aligned_cols=120  Identities=21%  Similarity=0.231  Sum_probs=100.5

Q ss_pred             ccccCCCCcceeeccCC-----CCCCeeEEEEeecccccc-hhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEE
Q psy4166         122 DVVSTSPPRPSSLLLSP-----APSQHVAIKRITKKNLAK-TQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVM  195 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~-~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~  195 (249)
                      ..+|.|++|.||.+...     .++..||||++....... ...+.+|+.+++.++   |||||++++++......++||
T Consensus        26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~~~~~~~~~~~~~lv~  102 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN---CHHVVRLLGVVSQGQPTLVIM  102 (308)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC---CTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcC---CCCEeeeeeEEecCCceeEEE
Confidence            45889999999988653     346789999997543222 245778888887766   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         196 EFCNGGDLADYLVSKG----------TLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       196 e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      |||++|+|.+++...+          .+++..+..++.|++.|+.|||       |+||+||||..
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~  168 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE  168 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred             eecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecC
Confidence            9999999999997542          3688999999999999999999       99999999853

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.9e-20  Score=148.21  Aligned_cols=88  Identities=23%  Similarity=0.447  Sum_probs=77.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCC-----H
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRIS-----F   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~-----~   76 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+....   +..|..+|+++++||.+||++||.+|++     +
T Consensus       179 ~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~  255 (337)
T d1o6la_         179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA  255 (337)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTH
T ss_pred             CCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCC---CCCCccCCHHHHHHHHhhccCCchhhcccccccH
Confidence            6789999999999999999999999999999887766555443   4557789999999999999999999995     8


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++||||..+.|..
T Consensus       256 ~eil~Hp~f~~i~~~~  271 (337)
T d1o6la_         256 KEVMEHRFFLSINWQD  271 (337)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHHcCcccccCCHHH
Confidence            9999999999876654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.81  E-value=6e-20  Score=147.24  Aligned_cols=87  Identities=18%  Similarity=0.303  Sum_probs=74.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+|+.++||||+||++|||++|++||.+.+..++...+...... +...+..+++++.+||.+||++||.+|||+.+++
T Consensus       202 ~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil  281 (352)
T d1koba_         202 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL  281 (352)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            578999999999999999999999999998888776665554433 2334567899999999999999999999999999


Q ss_pred             cCCCCCCC
Q psy4166          81 AHPFLQPL   88 (249)
Q Consensus        81 ~~~~~~~~   88 (249)
                      +||||+..
T Consensus       282 ~Hp~~~~~  289 (352)
T d1koba_         282 EHPWLKGD  289 (352)
T ss_dssp             TSTTTSSC
T ss_pred             cCHhhCCC
Confidence            99999854

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.80  E-value=4.9e-20  Score=147.64  Aligned_cols=90  Identities=21%  Similarity=0.292  Sum_probs=74.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+..++...+...... ....+..+++++++||.+||..||.+|||+++++
T Consensus       199 ~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil  278 (350)
T d1koaa2         199 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL  278 (350)
T ss_dssp             TCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             CCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            568999999999999999999999999998887776655443322 2223346899999999999999999999999999


Q ss_pred             cCCCCCCCCCC
Q psy4166          81 AHPFLQPLAPH   91 (249)
Q Consensus        81 ~~~~~~~~~~~   91 (249)
                      +||||......
T Consensus       279 ~hp~~~~~~~~  289 (350)
T d1koaa2         279 EHPWLTPGNAP  289 (350)
T ss_dssp             HSTTTSCTTCC
T ss_pred             cCcccCCCCCC
Confidence            99999876543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=1.1e-19  Score=143.80  Aligned_cols=88  Identities=20%  Similarity=0.394  Sum_probs=76.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+..++...+....   ...|..+++++.+++.+||.+||.+|+     ++
T Consensus       175 ~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~  251 (316)
T d1fota_         175 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE---LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGT  251 (316)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTT
T ss_pred             CCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhH
Confidence            6789999999999999999999999999998877766554433   345667899999999999999999996     89


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +++++||||+++.|..
T Consensus       252 ~~il~Hp~f~~i~~~~  267 (316)
T d1fota_         252 EDVKNHPWFKEVVWEK  267 (316)
T ss_dssp             HHHHTSGGGSSCCHHH
T ss_pred             HHHHcCcccccCCHHH
Confidence            9999999999887654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=3.1e-19  Score=140.35  Aligned_cols=118  Identities=20%  Similarity=0.191  Sum_probs=99.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCC
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG  201 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g  201 (249)
                      ..+|.|++|.||++.+..+++.||+|++.....  ...+.+|+++++.++  +|++|+.+..++.+....|+||||+ +|
T Consensus        13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~--~~~~i~~~~~~~~~~~~~~ivme~~-~~   87 (299)
T d1ckia_          13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ--GGVGIPTIRWCGAEGDYNVMVMELL-GP   87 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHST--TSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHcc--CCCcccEEEEEEecCCEEEEEEEEc-CC
Confidence            468999999999999989999999999876432  256789999999887  3445667777788899999999999 56


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         202 DLADYLVS-KGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       202 ~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +|.+.+.. .+.+++..+..++.|++.|+.|||       |+||+|||+..
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~  138 (299)
T d1ckia_          88 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL  138 (299)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECC
T ss_pred             chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccc
Confidence            77666654 457999999999999999999999       99999999764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4.5e-20  Score=142.82  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=66.3

Q ss_pred             CCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKY-DAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y-~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +.+| +.++||||+||++|||++|++||.+.+..................+..+++++.+||.+||+.||.+|||+++++
T Consensus       179 ~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil  258 (271)
T d1nvra_         179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIK  258 (271)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             CCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            3455 568999999999999999999998765533222222222222333456899999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||+.
T Consensus       259 ~hpwf~~  265 (271)
T d1nvra_         259 KDRWYNK  265 (271)
T ss_dssp             TCTTTTC
T ss_pred             cCHhhCc
Confidence            9999974

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.79  E-value=6.6e-20  Score=142.39  Aligned_cols=85  Identities=24%  Similarity=0.337  Sum_probs=71.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++||||+||++|||++|+.||.+.+.......+...... ....+..+|+++++||.+||+.||.+||+++++++
T Consensus       190 ~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         190 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            46889999999999999999999999999887776655444322 22334478999999999999999999999999999


Q ss_pred             CCCCCC
Q psy4166          82 HPFLQP   87 (249)
Q Consensus        82 ~~~~~~   87 (249)
                      ||||++
T Consensus       270 h~~~~~  275 (277)
T d1phka_         270 HPFFQQ  275 (277)
T ss_dssp             SGGGCT
T ss_pred             CHHHHH
Confidence            999985

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=7.5e-20  Score=146.64  Aligned_cols=89  Identities=22%  Similarity=0.427  Sum_probs=76.1

Q ss_pred             CCCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----C
Q psy4166           1 MSMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----S   75 (249)
Q Consensus         1 ~~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~   75 (249)
                      .+.+|+.++|||||||++|||++|++||.+.+...+...+....   +..|..+++++.+||++||+.||.+|+     +
T Consensus       211 ~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t  287 (350)
T d1rdqe_         211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNG  287 (350)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTT
T ss_pred             cCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHHhhhCHHhcccccccc
Confidence            36789999999999999999999999999988877665554433   344667999999999999999999995     8


Q ss_pred             HHHHhcCCCCCCCCCCC
Q psy4166          76 FEQLFAHPFLQPLAPHP   92 (249)
Q Consensus        76 ~~~i~~~~~~~~~~~~~   92 (249)
                      ++++++||||+...|..
T Consensus       288 ~~ell~Hp~f~~~~~~~  304 (350)
T d1rdqe_         288 VNDIKNHKWFATTDWIA  304 (350)
T ss_dssp             THHHHTSGGGTTCCHHH
T ss_pred             HHHHHcCccccCCCHHH
Confidence            99999999999887654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.1e-19  Score=144.20  Aligned_cols=90  Identities=24%  Similarity=0.389  Sum_probs=70.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCC-----CH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQY-YEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRI-----SF   76 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~-----~~   76 (249)
                      ..|+.++||||+||++|||++|+.||.+.+....... ........+..|..+++++.+||.+||.+||.+|+     ++
T Consensus       207 ~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~  286 (322)
T d1vzoa_         207 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDA  286 (322)
T ss_dssp             ---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTH
T ss_pred             cCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccH
Confidence            3578899999999999999999999987655433222 22333344556778999999999999999999999     48


Q ss_pred             HHHhcCCCCCCCCCCC
Q psy4166          77 EQLFAHPFLQPLAPHP   92 (249)
Q Consensus        77 ~~i~~~~~~~~~~~~~   92 (249)
                      +|+++||||+++.+..
T Consensus       287 ~eil~Hpff~~i~~~~  302 (322)
T d1vzoa_         287 DEIKEHLFFQKINWDD  302 (322)
T ss_dssp             HHHHTSGGGTTCCHHH
T ss_pred             HHHHcCHhhcCCCHHH
Confidence            9999999999877543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=1.8e-19  Score=141.96  Aligned_cols=84  Identities=20%  Similarity=0.228  Sum_probs=69.8

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAH   82 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~   82 (249)
                      ..|+.++|||||||++|||++|+.||.+.+..+....+...... ...+..+++++++||.+||+.||.+|||++++++|
T Consensus       189 ~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            46999999999999999999999999988876655444333322 22345689999999999999999999999999999


Q ss_pred             CCCCC
Q psy4166          83 PFLQP   87 (249)
Q Consensus        83 ~~~~~   87 (249)
                      |||..
T Consensus       268 p~~~~  272 (309)
T d1u5ra_         268 RFVLR  272 (309)
T ss_dssp             HHHHS
T ss_pred             HHhcC
Confidence            99974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.9e-20  Score=145.28  Aligned_cols=86  Identities=22%  Similarity=0.361  Sum_probs=72.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++||||+||++|||++|.+||.+.+..++...+.......+ ..+..+++++++||.+||..||.+|||+++++
T Consensus       177 ~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil  256 (321)
T d1tkia_         177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL  256 (321)
T ss_dssp             TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             CCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            56789999999999999999999999999988877665544432222 22346899999999999999999999999999


Q ss_pred             cCCCCCC
Q psy4166          81 AHPFLQP   87 (249)
Q Consensus        81 ~~~~~~~   87 (249)
                      +||||..
T Consensus       257 ~hp~~~~  263 (321)
T d1tkia_         257 QHPWLKQ  263 (321)
T ss_dssp             HSHHHHS
T ss_pred             cCHhhcc
Confidence            9999974

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.76  E-value=4.8e-19  Score=138.40  Aligned_cols=85  Identities=24%  Similarity=0.290  Sum_probs=66.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC--------------------------CCCCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV--------------------------PKVPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~   56 (249)
                      ..|+.++||||+||++|||++|+.||.+.+..+....+......+                          ......+++
T Consensus       176 ~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  255 (286)
T d1ob3a_         176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE  255 (286)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCH
T ss_pred             CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCH
Confidence            467899999999999999999999999887765543332211100                          011235689


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      ++.+||++||++||++|||++|+++||||++
T Consensus       256 ~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         256 SGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            9999999999999999999999999999973

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-18  Score=136.73  Aligned_cols=86  Identities=24%  Similarity=0.308  Sum_probs=66.6

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---------------C-----------CCCCCHH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPK---------------V-----------PVGTSAE   57 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------~-----------~~~~~~~   57 (249)
                      .++.++||||+||++|+|++|+.||.+.+.......+......+..               .           ...++++
T Consensus       179 ~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  258 (298)
T d1gz8a_         179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDED  258 (298)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHH
T ss_pred             CCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHH
Confidence            4578999999999999999999999988876544333221111000               0           1246789


Q ss_pred             HHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          58 LKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        58 ~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +.+||++||+.||.+|||++++++||||+++.
T Consensus       259 ~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         259 GRSLLSQMLHYDPNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence            99999999999999999999999999998764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.2e-18  Score=138.09  Aligned_cols=85  Identities=18%  Similarity=0.186  Sum_probs=67.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC-CCCC----------------------------C
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP-KVPV----------------------------G   53 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~----------------------------~   53 (249)
                      .+|+.++||||+||++|||++|++||.+.++......+.......+ ....                            .
T Consensus       197 ~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (318)
T d3blha1         197 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV  276 (318)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHH
T ss_pred             CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhcccc
Confidence            4689999999999999999999999998887766554433222111 1110                            1


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQP   87 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~   87 (249)
                      .++++.+||.+||++||++|+|++++++||||+.
T Consensus       277 ~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         277 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             CCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             CCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            2678899999999999999999999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.3e-19  Score=139.49  Aligned_cols=87  Identities=22%  Similarity=0.406  Sum_probs=65.4

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---------------------------------------Hh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY---------------------------------------EK   42 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~---------------------------------------~~   42 (249)
                      +.+|+.++||||+||++|||++|+.||.+.+..+.....                                       ..
T Consensus       177 ~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (322)
T d1s9ja_         177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY  256 (322)
T ss_dssp             CSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhh
Confidence            578999999999999999999999999876543221100                                       00


Q ss_pred             -cccCCCCCC-CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          43 -NLVLVPKVP-VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        43 -~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                       ....++..+ ..++.++.+||.+||++||.+|||++++++||||+..
T Consensus       257 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             HHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             hhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence             001111122 2368899999999999999999999999999999753

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.3e-19  Score=137.64  Aligned_cols=75  Identities=23%  Similarity=0.397  Sum_probs=62.4

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCC
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPF   84 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~   84 (249)
                      |+.++||||+||++|||++|+.||.+.+  .    +...   ....+..+|+++++||.+||..||.+|||++++++|||
T Consensus       187 ~~~~~DiwSlGvilyell~g~~Pf~~~~--~----i~~~---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~  257 (273)
T d1xwsa_         187 HGRSAAVWSLGILLYDMVCGDIPFEHDE--E----IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW  257 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHHC---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             CCcccccccceeeehhHhhCCCCCCCch--H----Hhhc---ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence            4567999999999999999999997532  1    1122   22345678999999999999999999999999999999


Q ss_pred             CCCC
Q psy4166          85 LQPL   88 (249)
Q Consensus        85 ~~~~   88 (249)
                      |++.
T Consensus       258 ~~~~  261 (273)
T d1xwsa_         258 MQDV  261 (273)
T ss_dssp             GSSC
T ss_pred             hCCC
Confidence            9864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.5e-18  Score=137.84  Aligned_cols=88  Identities=25%  Similarity=0.359  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC----------------------------CCCCCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL----------------------------VPKVPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~   54 (249)
                      ..|+.++||||+||++|||++|++||.+.+.......+......                            ........
T Consensus       194 ~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (346)
T d1cm8a_         194 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA  273 (346)
T ss_dssp             TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTC
T ss_pred             CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCC
Confidence            45789999999999999999999999988765543322211111                            01123457


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++++.+||.+||+.||.+|||++++++||||+....
T Consensus       274 s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         274 SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCC
Confidence            899999999999999999999999999999997653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.8e-18  Score=136.90  Aligned_cols=88  Identities=24%  Similarity=0.263  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-----------------CCC---------CCCCCCCH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLV-----------------LVP---------KVPVGTSA   56 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~-----------------~~~---------~~~~~~~~   56 (249)
                      ..|+.++||||+||++|||++|++||.+.+..+....+.+...                 ..+         ......++
T Consensus       198 ~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  277 (350)
T d1q5ka_         198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP  277 (350)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCH
T ss_pred             cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCH
Confidence            5799999999999999999999999998877554333221100                 000         01234789


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ++.+||.+||++||.+|||+.|+++||||.+...
T Consensus       278 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         278 EAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence            9999999999999999999999999999987643

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4e-18  Score=136.73  Aligned_cols=87  Identities=24%  Similarity=0.347  Sum_probs=68.4

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC--------------------C--------CCCCC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLVP--------------------K--------VPVGT   54 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------~--------~~~~~   54 (249)
                      ..|+.++||||+||++|+|++|++||.+.+.......+.......+                    .        ....+
T Consensus       194 ~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (348)
T d2gfsa1         194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA  273 (348)
T ss_dssp             SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTC
T ss_pred             ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCC
Confidence            3568899999999999999999999998887655444322211110                    0        01347


Q ss_pred             CHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          55 SAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        55 ~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      ++++.+||.+||+.||.+|+|+.++++||||++..
T Consensus       274 s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         274 NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence            89999999999999999999999999999999754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.9e-19  Score=142.39  Aligned_cols=86  Identities=27%  Similarity=0.467  Sum_probs=65.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHhcccCCCCCC----CCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQY-YEKNLVLVPKVP----VGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +.+|+.++||||+||++|||++|++||.+.+....... ...........|    ..+|+++.+||.+||+.||++||++
T Consensus       187 ~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~  266 (335)
T d2ozaa1         187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI  266 (335)
T ss_dssp             GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCH
Confidence            45799999999999999999999999987765443322 222222222222    2478999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q psy4166          77 EQLFAHPFLQP   87 (249)
Q Consensus        77 ~~i~~~~~~~~   87 (249)
                      .++++||||..
T Consensus       267 ~eil~hp~~~~  277 (335)
T d2ozaa1         267 TEFMNHPWIMQ  277 (335)
T ss_dssp             HHHHHSHHHHT
T ss_pred             HHHHcCHHhhC
Confidence            99999999964

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.6e-18  Score=132.15  Aligned_cols=86  Identities=26%  Similarity=0.346  Sum_probs=64.4

Q ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHHhcccCC--------------------------CCCCCCCCH
Q psy4166           4 KYDAKADLYSVGTIVFQCLTGKAPFI-ANSPPQLKQYYEKNLVLV--------------------------PKVPVGTSA   56 (249)
Q Consensus         4 ~y~~~~DiwS~G~il~el~~g~~pf~-~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~   56 (249)
                      .|+.++||||+||++|||++|+.||. +.+..+....+......+                          ......+++
T Consensus       178 ~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  257 (292)
T d1unla_         178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA  257 (292)
T ss_dssp             CCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCH
T ss_pred             CCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCH
Confidence            47899999999999999999998864 444444433332211110                          012234688


Q ss_pred             HHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          57 ELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        57 ~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      .+.+||++||++||.+|||++|+++||||++..
T Consensus       258 ~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            999999999999999999999999999998653

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.6e-18  Score=129.66  Aligned_cols=79  Identities=18%  Similarity=0.355  Sum_probs=68.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |+.||.+.+..++...+.....  +..|...++++.+||.+||..||++|||+++++
T Consensus       175 ~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil  252 (258)
T d1k2pa_         175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR--LYRPHLASEKVYTIMYSCWHEKADERPTFKILL  252 (258)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred             CCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCC--CCCcccccHHHHHHHHHHccCCHhHCcCHHHHH
Confidence            3579999999999999999998 8999999998888776665433  345778899999999999999999999999998


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      +|
T Consensus       253 ~~  254 (258)
T d1k2pa_         253 SN  254 (258)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.5e-17  Score=133.18  Aligned_cols=88  Identities=25%  Similarity=0.293  Sum_probs=67.0

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC---------------------CC-------CCCCC
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL---------------------VP-------KVPVG   53 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---------------------~~-------~~~~~   53 (249)
                      +..|+.++||||+||++|||++|++||.+.+..............                     ..       .....
T Consensus       187 ~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (345)
T d1pmea_         187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN  266 (345)
T ss_dssp             BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTT
T ss_pred             CCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCC
Confidence            356889999999999999999999999887765433222111000                     00       01235


Q ss_pred             CCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCC
Q psy4166          54 TSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLA   89 (249)
Q Consensus        54 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~   89 (249)
                      +++++.+|+.+||++||.+|||++++++||||....
T Consensus       267 ~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         267 ADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            688999999999999999999999999999998543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.3e-17  Score=129.28  Aligned_cols=79  Identities=18%  Similarity=0.266  Sum_probs=67.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |.+||.+.+..++...+....  .++.|..+++++.+||.+||..||.+|||+.+++
T Consensus       183 ~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~  260 (273)
T d1mp8a_         183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE--RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK  260 (273)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            3679999999999999999998 999999988887776665443  3355778999999999999999999999999997


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      .+
T Consensus       261 ~~  262 (273)
T d1mp8a_         261 AQ  262 (273)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=4e-17  Score=127.96  Aligned_cols=79  Identities=18%  Similarity=0.407  Sum_probs=67.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |++||.+.+..++...+.....  ++.|..+++++.+||.+||..||.+||++.+++
T Consensus       207 ~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~  284 (299)
T d1jpaa_         207 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR--LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV  284 (299)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             cCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            4679999999999999999998 8999999988887766655433  334667899999999999999999999998887


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       285 ~~  286 (299)
T d1jpaa_         285 NT  286 (299)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.6e-17  Score=127.58  Aligned_cols=80  Identities=21%  Similarity=0.398  Sum_probs=63.7

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCC--CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEKNLVLV--PKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      ..|+.++|||||||++|||+||+.||.+.+... +...+......+  ...+..+++++.+||.+||..||.+|||+.++
T Consensus       184 ~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i  263 (276)
T d1uwha_         184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQI  263 (276)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence            358999999999999999999999998876543 333343332221  23456789999999999999999999999999


Q ss_pred             hcC
Q psy4166          80 FAH   82 (249)
Q Consensus        80 ~~~   82 (249)
                      +.+
T Consensus       264 l~~  266 (276)
T d1uwha_         264 LAS  266 (276)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.9e-17  Score=128.79  Aligned_cols=81  Identities=20%  Similarity=0.376  Sum_probs=68.3

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH--
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL--   79 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i--   79 (249)
                      ..|+.++|||||||++|||+| |+.||.+.+..++...+.....  +..|..+++++.+||.+||..||++||++.++  
T Consensus       187 ~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~  264 (285)
T d1u59a_         187 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  264 (285)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            568999999999999999998 9999999888777766655443  45577899999999999999999999998887  


Q ss_pred             -hcCCCC
Q psy4166          80 -FAHPFL   85 (249)
Q Consensus        80 -~~~~~~   85 (249)
                       +++.|+
T Consensus       265 ~L~~~~~  271 (285)
T d1u59a_         265 RMRACYY  271 (285)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             445554

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.9e-17  Score=131.38  Aligned_cols=79  Identities=16%  Similarity=0.292  Sum_probs=65.1

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++|||||||++|||++ |++||.+.+..+ +...+....  .+..|..+++++++||.+||+.||++|||+++|
T Consensus       240 ~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~--~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei  317 (325)
T d1rjba_         240 EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF--KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL  317 (325)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            4679999999999999999998 899998866544 344444332  345577899999999999999999999999999


Q ss_pred             hcC
Q psy4166          80 FAH   82 (249)
Q Consensus        80 ~~~   82 (249)
                      ++|
T Consensus       318 ~~~  320 (325)
T d1rjba_         318 TSF  320 (325)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.5e-17  Score=125.41  Aligned_cols=79  Identities=20%  Similarity=0.385  Sum_probs=66.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |.+||...+..++...+.....  +..|..+++++.+||.+||+.||++||++++++
T Consensus       176 ~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il  253 (263)
T d1sm2a_         176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR--LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL  253 (263)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCC--CCCccccCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence            5689999999999999999999 6788888787777666655433  344677899999999999999999999999998


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       254 ~~  255 (263)
T d1sm2a_         254 RQ  255 (263)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.1e-17  Score=128.19  Aligned_cols=76  Identities=20%  Similarity=0.397  Sum_probs=65.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||++ |++||.+.+..++...+....  .+..|..+++++.+||.+||..||.+||+++++.
T Consensus       185 ~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~--~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~  261 (277)
T d1xbba_         185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE--RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  261 (277)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCC--CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            468899999999999999998 999999998888777665543  3455778999999999999999999999999884

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.2e-18  Score=135.17  Aligned_cols=87  Identities=24%  Similarity=0.352  Sum_probs=65.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccC-------------------CCCC------------
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVL-------------------VPKV------------   50 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------------------~~~~------------   50 (249)
                      +..|+.++||||+||++|||++|++||.+.+.......+......                   .+..            
T Consensus       192 ~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (355)
T d2b1pa1         192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS  271 (355)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGG
T ss_pred             CCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccc
Confidence            678999999999999999999999999988765543322111100                   0000            


Q ss_pred             --C------CCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCC
Q psy4166          51 --P------VGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPL   88 (249)
Q Consensus        51 --~------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~   88 (249)
                        +      ...++++.+||++||..||++|||++++++||||+..
T Consensus       272 ~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         272 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             GSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             cccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence              0      0135678999999999999999999999999999853

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.68  E-value=3.8e-17  Score=129.89  Aligned_cols=88  Identities=19%  Similarity=0.293  Sum_probs=65.2

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHh-------------ccc---------------------CC
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-LKQYYEK-------------NLV---------------------LV   47 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-~~~~~~~-------------~~~---------------------~~   47 (249)
                      ..|+.++||||+||++|||++|+.||....... ....+..             ...                     ..
T Consensus       205 ~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (328)
T d3bqca1         205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH  284 (328)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCC
T ss_pred             CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhccc
Confidence            468999999999999999999999997654321 1111100             000                     00


Q ss_pred             CCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCC
Q psy4166          48 PKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAP   90 (249)
Q Consensus        48 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~   90 (249)
                      ......+++++.+||++||++||.+|+|++++++||||..+.+
T Consensus       285 ~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         285 SENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             TTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             ccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            0111236899999999999999999999999999999998765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.68  E-value=5e-17  Score=126.16  Aligned_cols=79  Identities=27%  Similarity=0.457  Sum_probs=63.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC-CCCCCCCCHHHHHHHHHhhhhCcccCC-CHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYYEKNLVLV-PKVPVGTSAELKELLLGLLKRNAMDRI-SFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~-~~~~i   79 (249)
                      +..|+.++||||+||++|||++|++||.+.+..+....+......+ ...+..+|+++.+||.+||++||.+|| +++++
T Consensus       188 ~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l  267 (277)
T d1o6ya_         188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM  267 (277)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred             CCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH
Confidence            5689999999999999999999999999988877654443333322 233457899999999999999999999 66665


Q ss_pred             h
Q psy4166          80 F   80 (249)
Q Consensus        80 ~   80 (249)
                      +
T Consensus       268 ~  268 (277)
T d1o6ya_         268 R  268 (277)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.3e-17  Score=126.11  Aligned_cols=78  Identities=17%  Similarity=0.291  Sum_probs=66.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++ |+.||.+.+..+....+.+.. ..++.+..+++++.+||.+||..||++|||+.++.+
T Consensus       189 ~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG-ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCC-CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            467889999999999999998 899999998888766554433 334556778999999999999999999999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5e-17  Score=128.51  Aligned_cols=79  Identities=19%  Similarity=0.306  Sum_probs=68.3

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+| |.+||.+.+..++...+.....  +..|..+++++.+|+.+||..||.+||++.+++
T Consensus       187 ~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil  264 (317)
T d1xkka_         187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELI  264 (317)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHH
Confidence            3579999999999999999998 8999999888877766655443  345677999999999999999999999999998


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      .|
T Consensus       265 ~~  266 (317)
T d1xkka_         265 IE  266 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=9.1e-17  Score=125.97  Aligned_cols=78  Identities=19%  Similarity=0.344  Sum_probs=67.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |.+||.+.+..++...+...  ..+..|..+++++.+||.+||+.||++|||+.+++
T Consensus       211 ~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~--~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil  288 (299)
T d1fgka_         211 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG--HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV  288 (299)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT--CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcC--CCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHH
Confidence            4689999999999999999998 79999988888777666543  34456778999999999999999999999999987


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       289 ~  289 (299)
T d1fgka_         289 E  289 (299)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5.3e-17  Score=124.80  Aligned_cols=79  Identities=23%  Similarity=0.360  Sum_probs=66.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |++||.+.+..++...+...  ..++.|..+++++++||.+||..||.+|||+.+++
T Consensus       174 ~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~  251 (262)
T d1byga_         174 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLR  251 (262)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC--CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHH
Confidence            4579999999999999999998 89999988877776655433  34456778999999999999999999999999987


Q ss_pred             cC
Q psy4166          81 AH   82 (249)
Q Consensus        81 ~~   82 (249)
                      ++
T Consensus       252 ~~  253 (262)
T d1byga_         252 EQ  253 (262)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.8e-16  Score=122.11  Aligned_cols=85  Identities=19%  Similarity=0.350  Sum_probs=69.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |++||.+.+..++...+....  .++.+..+++++++||.+||+.||++||++++++
T Consensus       188 ~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  265 (285)
T d1fmka3         188 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQ  265 (285)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC--CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHH
Confidence            3578999999999999999999 566667777776666665443  3345778999999999999999999999999998


Q ss_pred             c--CCCCCCC
Q psy4166          81 A--HPFLQPL   88 (249)
Q Consensus        81 ~--~~~~~~~   88 (249)
                      .  ++||...
T Consensus       266 ~~L~~~~~~~  275 (285)
T d1fmka3         266 AFLEDYFTST  275 (285)
T ss_dssp             HHHHTTTSCS
T ss_pred             HHHhhhhcCC
Confidence            7  7888754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.7e-17  Score=126.50  Aligned_cols=82  Identities=24%  Similarity=0.396  Sum_probs=67.1

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||+| |.+||...+..++...+....  .+..|..+++++.+|+.+||+.||++|||++++++
T Consensus       185 ~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~--~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~  262 (272)
T d1qpca_         185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY--RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (272)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC--CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            468999999999999999999 567777777777666655443  33456789999999999999999999999999987


Q ss_pred             --CCCCC
Q psy4166          82 --HPFLQ   86 (249)
Q Consensus        82 --~~~~~   86 (249)
                        ++||.
T Consensus       263 ~L~~~ft  269 (272)
T d1qpca_         263 VLEDFFT  269 (272)
T ss_dssp             HHHHHHH
T ss_pred             Hhhhhhh
Confidence              56653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.65  E-value=1.6e-16  Score=124.69  Aligned_cols=78  Identities=17%  Similarity=0.307  Sum_probs=66.7

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTG-KAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++| .+||.+.+..++...+....  .+..|..+++++.+||.+||+.||.+|||+.++.
T Consensus       216 ~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~--~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~  293 (301)
T d1lufa_         216 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN--ILACPENCPLELYNLMRLCWSKLPADRPSFCSIH  293 (301)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCC--CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            35799999999999999999997 57899988888777665543  3456778999999999999999999999999986


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       294 ~  294 (301)
T d1lufa_         294 R  294 (301)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=3.4e-17  Score=131.91  Aligned_cols=90  Identities=20%  Similarity=0.278  Sum_probs=61.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-------HHHHHHhccc-----------------------C-----
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ-------LKQYYEKNLV-----------------------L-----   46 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~-----------------------~-----   46 (249)
                      +.+|+.++|+||+||+++||++|+.||.+.....       +...+.....                       .     
T Consensus       203 ~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (362)
T d1q8ya_         203 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLK  282 (362)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCC
T ss_pred             ccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhcccccc
Confidence            4679999999999999999999999997654311       1111100000                       0     


Q ss_pred             ----------CCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhcCCCCCCCCCC
Q psy4166          47 ----------VPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFAHPFLQPLAPH   91 (249)
Q Consensus        47 ----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~~~~~~~   91 (249)
                                ....+...++++.+||.+||++||.+|||++++++||||++....
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         283 FWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM  337 (362)
T ss_dssp             BCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             CCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCc
Confidence                      000111235789999999999999999999999999999965443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.2e-16  Score=125.94  Aligned_cols=78  Identities=17%  Similarity=0.358  Sum_probs=65.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTG-KAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++| .+||.+.+..++...+....  .+..|..+++++.+||.+||..||++||++.++++
T Consensus       201 ~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~  278 (309)
T d1fvra_         201 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  278 (309)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC--CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC--CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            5689999999999999999996 56888888877766554432  34557789999999999999999999999999987


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       279 ~  279 (309)
T d1fvra_         279 S  279 (309)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=4.7e-16  Score=121.09  Aligned_cols=78  Identities=23%  Similarity=0.383  Sum_probs=63.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCC-CCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGK-APFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++|. +||.+.+...+...+....  .+..|..+++++.+||.+||+.||.+|||+.+++
T Consensus       190 ~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~  267 (287)
T d1opja_         190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH  267 (287)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC--CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            367999999999999999999955 5555666666655555433  3455778999999999999999999999999997


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       268 ~  268 (287)
T d1opja_         268 Q  268 (287)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=9.2e-16  Score=119.22  Aligned_cols=78  Identities=15%  Similarity=0.391  Sum_probs=63.9

Q ss_pred             CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||++ |.+||.+.+..++...+....  .+..|..++.++.++|.+||..||++||++.+++
T Consensus       187 ~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil  264 (283)
T d1mqba_         187 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF--RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIV  264 (283)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC--CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             cCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC--CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHH
Confidence            4689999999999999999999 456666667766666555443  3345677899999999999999999999999987


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       265 ~  265 (283)
T d1mqba_         265 S  265 (283)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.1e-16  Score=122.67  Aligned_cols=78  Identities=19%  Similarity=0.247  Sum_probs=66.5

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTG-KAPFIANSPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      +..|+.++|||||||++|||+|| .+||.+.+..+....+....  .+..|..+++.+.++|.+||+.||++|||+++++
T Consensus       209 ~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~--~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il  286 (308)
T d1p4oa_         209 DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII  286 (308)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             cCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC--CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            35789999999999999999997 68898888887776655433  3455678999999999999999999999999998


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       287 ~  287 (308)
T d1p4oa_         287 S  287 (308)
T ss_dssp             H
T ss_pred             H
Confidence            7

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.7e-16  Score=121.40  Aligned_cols=79  Identities=16%  Similarity=0.330  Sum_probs=63.6

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCHH-HHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTG-KAPFIANSPP-QLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQL   79 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g-~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i   79 (249)
                      +..|+.++|||||||++|||++| .+||.+.+.. .+...+....  .+..|..+++++.+||.+||+.||.+|||+.++
T Consensus       210 ~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ei  287 (299)
T d1ywna1         210 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL  287 (299)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            45799999999999999999986 6788776543 3444444433  345577799999999999999999999999999


Q ss_pred             hcC
Q psy4166          80 FAH   82 (249)
Q Consensus        80 ~~~   82 (249)
                      ++|
T Consensus       288 l~~  290 (299)
T d1ywna1         288 VEH  290 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=3.3e-15  Score=120.08  Aligned_cols=124  Identities=18%  Similarity=0.167  Sum_probs=97.1

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhh--------cCCCCeeeeeEeEEe--CCeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTE--------LHHENVVELLHCKES--DQHV  191 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~--------~~h~niv~l~~~~~~--~~~~  191 (249)
                      ..+|.|.+|.||++.+..+++.||||++++.... .+.+.+|+.+++.+..        +.|+||+++++++..  ....
T Consensus        19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~-~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~   97 (362)
T d1q8ya_          19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV   97 (362)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH-HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeccccc-hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccce
Confidence            6789999999999999999999999999765322 2566788888887752        237899999988864  4567


Q ss_pred             EEEEeccCCCCHHHHHH-h--cCCCCHHHHHHHHHHHHHHHHHhh--------cCCccceeeeecc
Q psy4166         192 YLVMEFCNGGDLADYLV-S--KGTLSEDTIRIFLKLHQMLQLYFH--------DFTPWSFVILYTI  246 (249)
Q Consensus       192 ~lv~e~~~~g~L~~~l~-~--~~~~~~~~~~~~~~~i~~~l~ylh--------d~kp~nili~~~~  246 (249)
                      +++|+++.++....... .  ...+++..++.++.|++.|+.|||        |+||+||||..+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~  163 (362)
T d1q8ya_          98 HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  163 (362)
T ss_dssp             EEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             eeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccC
Confidence            77777765554333322 2  346899999999999999999999        9999999997653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.4e-15  Score=118.44  Aligned_cols=77  Identities=16%  Similarity=0.360  Sum_probs=62.0

Q ss_pred             CCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHH-HHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHh
Q psy4166           3 MKYDAKADLYSVGTIVFQCLT-GKAPFIANSPPQ-LKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLF   80 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~-g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~   80 (249)
                      ..|+.++|||||||++|||+| |.+||.+.+..+ +...+....  .+..+..+++++.+||.+||..||.+||++++++
T Consensus       222 ~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il  299 (311)
T d1t46a_         222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV  299 (311)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            578999999999999999998 777777765543 444444433  3345677899999999999999999999999987


Q ss_pred             c
Q psy4166          81 A   81 (249)
Q Consensus        81 ~   81 (249)
                      +
T Consensus       300 ~  300 (311)
T d1t46a_         300 Q  300 (311)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.3e-15  Score=118.42  Aligned_cols=78  Identities=23%  Similarity=0.327  Sum_probs=59.9

Q ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCHHHHhc
Q psy4166           3 MKYDAKADLYSVGTIVFQCLTGKAPFIAN-SPPQLKQYYEKNLVLVPKVPVGTSAELKELLLGLLKRNAMDRISFEQLFA   81 (249)
Q Consensus         3 ~~y~~~~DiwS~G~il~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~   81 (249)
                      ..|+.++|||||||++|||++|..||... +..++...+....  .+..|..+++++.+||.+||+.||++||++.++++
T Consensus       209 ~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~--~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  286 (311)
T d1r0pa_         209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR--RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  286 (311)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC--CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            57899999999999999999976666543 3334444443333  34557778999999999999999999999999988


Q ss_pred             C
Q psy4166          82 H   82 (249)
Q Consensus        82 ~   82 (249)
                      +
T Consensus       287 ~  287 (311)
T d1r0pa_         287 R  287 (311)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=3.7e-15  Score=116.74  Aligned_cols=84  Identities=20%  Similarity=0.247  Sum_probs=59.2

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----Hhc-ccCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQLKQYY----EKN-LVLVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +.+|+.++|||||||++|||++|+.||.+.........+    ... ....+..+..+++++.+||..||..||.+||++
T Consensus       187 ~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~  266 (299)
T d1ckia_         187 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDY  266 (299)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCH
T ss_pred             CCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCH
Confidence            567999999999999999999999999876654332211    111 111122345689999999999999999999997


Q ss_pred             HHH---hcCCCC
Q psy4166          77 EQL---FAHPFL   85 (249)
Q Consensus        77 ~~i---~~~~~~   85 (249)
                      +++   +++.|.
T Consensus       267 ~~i~~~l~~~~~  278 (299)
T d1ckia_         267 SYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            754   555443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.44  E-value=7.8e-14  Score=101.87  Aligned_cols=108  Identities=11%  Similarity=0.093  Sum_probs=79.0

Q ss_pred             ccccCCCCcceeeccCCCCCCeeEEEEeeccccc-----c-------------hhcHHHHHHHHHHhhhcCCCCeeeeeE
Q psy4166         122 DVVSTSPPRPSSLLLSPAPSQHVAIKRITKKNLA-----K-------------TQNFGKEINILKELTELHHENVVELLH  183 (249)
Q Consensus       122 ~~~~~g~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~e~~~~~~~~~~~h~niv~l~~  183 (249)
                      ..+|.|++|.||.+.+. +++.||+|+++.....     .             .....+|...+..+.   |.+++..++
T Consensus         6 ~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~v~~~~~   81 (191)
T d1zara2           6 KLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---GLAVPKVYA   81 (191)
T ss_dssp             EEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---TSSSCCEEE
T ss_pred             CEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc---CCCcceEEE
Confidence            46889999999999764 6889999987642111     0             011234555555554   999998876


Q ss_pred             eEEeCCeEEEEEeccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh-------cCCccceeeee
Q psy4166         184 CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKLHQMLQLYFH-------DFTPWSFVILY  244 (249)
Q Consensus       184 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~i~~~l~ylh-------d~kp~nili~~  244 (249)
                      +..    .+++|||++++.+.       .+++..+..++.|++.++.|||       |+||+|||+..
T Consensus        82 ~~~----~~lvme~~~~~~~~-------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~  138 (191)
T d1zara2          82 WEG----NAVLMELIDAKELY-------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE  138 (191)
T ss_dssp             EET----TEEEEECCCCEEGG-------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET
T ss_pred             ecC----CEEEEEeecccccc-------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC
Confidence            532    27999999886543       2667778889999999999999       99999999963

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.35  E-value=2.2e-13  Score=106.07  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=57.8

Q ss_pred             CCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHH-Hhcc-cCCCCCCCCCCHHHHHHHHHhhhhCcccCCCH
Q psy4166           2 SMKYDAKADLYSVGTIVFQCLTGKAPFIANSPPQ---LKQYY-EKNL-VLVPKVPVGTSAELKELLLGLLKRNAMDRISF   76 (249)
Q Consensus         2 ~~~y~~~~DiwS~G~il~el~~g~~pf~~~~~~~---~~~~~-~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~   76 (249)
                      +.+|+.++|||||||++|||++|+.||.+.....   ....+ .... .........+++++.+++..|+..+|++||+.
T Consensus       187 ~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y  266 (293)
T d1csna_         187 GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDY  266 (293)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCH
T ss_pred             CCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence            6789999999999999999999999998654422   11111 1111 11112335688999999999999999999986


Q ss_pred             HHHh
Q psy4166          77 EQLF   80 (249)
Q Consensus        77 ~~i~   80 (249)
                      +.+.
T Consensus       267 ~~l~  270 (293)
T d1csna_         267 DYLQ  270 (293)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.2e-13  Score=106.60  Aligned_cols=76  Identities=12%  Similarity=0.156  Sum_probs=52.2

Q ss_pred             CCcchhHHHHHHHHHHHHcCCCCCCCCC---------------HHHHHHHHHhcccCCCCCCCC-----CCHHHHHHHHH
Q psy4166           5 YDAKADLYSVGTIVFQCLTGKAPFIANS---------------PPQLKQYYEKNLVLVPKVPVG-----TSAELKELLLG   64 (249)
Q Consensus         5 y~~~~DiwS~G~il~el~~g~~pf~~~~---------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~   64 (249)
                      |+.++|||||||++|||+||.+||....               ........ ......|..+..     ....+.+++.+
T Consensus       195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~l~~li~~  273 (303)
T d1vjya_         195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV-CEQKLRPNIPNRWQSCEALRVMAKIMRE  273 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH-TTSCCCCCCCGGGGGCHHHHHHHHHHHT
T ss_pred             cCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHH-hccccCCCCCcccCChHHHHHHHHHHHH
Confidence            6778999999999999999988874322               11222211 122222333222     23458899999


Q ss_pred             hhhhCcccCCCHHHHhc
Q psy4166          65 LLKRNAMDRISFEQLFA   81 (249)
Q Consensus        65 ~l~~~p~~R~~~~~i~~   81 (249)
                      ||..||.+|||+.++++
T Consensus       274 cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         274 CWYANGAARLTALRIKK  290 (303)
T ss_dssp             TCCSSGGGSCCHHHHHH
T ss_pred             HcccCHhHCcCHHHHHH
Confidence            99999999999999875

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.44  E-value=0.00066  Score=50.30  Aligned_cols=101  Identities=16%  Similarity=0.153  Sum_probs=70.8

Q ss_pred             cceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHHHHh
Q psy4166         130 RPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS  209 (249)
Q Consensus       130 ~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  209 (249)
                      ..+|...  ..+..+.+|+...........+.+|...+..+.  .+-.+++++.+..+.+..|+||++++|.++.+....
T Consensus        28 ~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~--~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~  103 (263)
T d1j7la_          28 AKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLE--GKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED  103 (263)
T ss_dssp             SEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHT--TTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT
T ss_pred             CcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHh--ccCCCCcEEEEEecCCceEEEEEecccccccccccc
Confidence            4566654  456677889887654444456788999888776  354577888888889999999999999888654422


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhcCCccc
Q psy4166         210 KGTLSEDTIRIFLKLHQMLQLYFHDFTPWS  239 (249)
Q Consensus       210 ~~~~~~~~~~~~~~~i~~~l~ylhd~kp~n  239 (249)
                           ......++.++...+.-||++.++.
T Consensus       104 -----~~~~~~~~~~l~~~l~~lH~~~~~~  128 (263)
T d1j7la_         104 -----EQSPEKIIELYAECIRLFHSIDISD  128 (263)
T ss_dssp             -----CSCHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             -----cccHHHHHHHHHHHHHHHhccCccc
Confidence                 2223345667777788899776543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.45  E-value=0.043  Score=39.73  Aligned_cols=96  Identities=14%  Similarity=0.086  Sum_probs=62.4

Q ss_pred             cceeeccCCCCCCeeEEEEeecccccchhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEeccCCCCHHHHHHh
Q psy4166         130 RPSSLLLSPAPSQHVAIKRITKKNLAKTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS  209 (249)
Q Consensus       130 ~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  209 (249)
                      ..+|+... ..+..+.+|.-....   ...+..|...++.+.. .+-.+++++.+..+.+..++|||+++|.++.+    
T Consensus        25 ~~v~r~~~-~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~-~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~----   95 (255)
T d1nd4a_          25 AAVFRLSA-QGRPVLFVKTDLSGA---LNELQDEAARLSWLAT-TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS----   95 (255)
T ss_dssp             CEEEEEEC-TTSCCEEEEEECSCT---TSCHHHHHHHHHHHHT-TTCCBCCEEEEEECSSCEEEEEECCSSEETTT----
T ss_pred             CeEEEEEe-CCCCEEEEEeCCccC---HhHHHHHHHHHHHHHh-cCCCCCceeeecccccceEEEEEeeecccccc----
Confidence            44666543 445667888765432   2457789998887763 23346788888888889999999999877633    


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhcCCcc
Q psy4166         210 KGTLSEDTIRIFLKLHQMLQLYFHDFTPW  238 (249)
Q Consensus       210 ~~~~~~~~~~~~~~~i~~~l~ylhd~kp~  238 (249)
                       .......   .+.++...+.-||.+.++
T Consensus        96 -~~~~~~~---~~~~l~~~la~LH~~~~~  120 (255)
T d1nd4a_          96 -SHLAPAE---KVSIMADAMRRLHTLDPA  120 (255)
T ss_dssp             -SCCCHHH---HHHHHHHHHHHHTTSCGG
T ss_pred             -ccccHHH---HHHHHHHHHHHHccCChh
Confidence             1133222   234566667777866544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.52  E-value=0.21  Score=38.77  Aligned_cols=109  Identities=12%  Similarity=0.026  Sum_probs=59.1

Q ss_pred             ccCCCCcceeeccCCCCCCeeEEEEeeccc--cc-----chhcHHHHHHHHHHhhhcCCCCeeeeeEeEEeCCeEEEEEe
Q psy4166         124 VSTSPPRPSSLLLSPAPSQHVAIKRITKKN--LA-----KTQNFGKEINILKELTELHHENVVELLHCKESDQHVYLVME  196 (249)
Q Consensus       124 ~~~g~~~~~~~~~~~~~~~~vavK~~~~~~--~~-----~~~~~~~e~~~~~~~~~~~h~niv~l~~~~~~~~~~~lv~e  196 (249)
                      ++.|..-.+|++.....++.+++|.-....  ..     .......|...++.+...-...+++++.+  +....++|||
T Consensus        34 ig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lvmE  111 (392)
T d2pula1          34 IGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVME  111 (392)
T ss_dssp             CCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEEC
T ss_pred             eCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEEEe
Confidence            455665668888777777888888643211  01     11335678888887763222456666654  4445678999


Q ss_pred             ccCCCCHH-HHHHhcCCCCHHHHHHHHHHHHHHHHHhhcC
Q psy4166         197 FCNGGDLA-DYLVSKGTLSEDTIRIFLKLHQMLQLYFHDF  235 (249)
Q Consensus       197 ~~~~g~L~-~~l~~~~~~~~~~~~~~~~~i~~~l~ylhd~  235 (249)
                      ++++..+. ..+... ......+..+...+...+.+.|+.
T Consensus       112 ~L~~~~~~~~~l~~~-~~~~~~a~~lg~~La~~h~~~~~~  150 (392)
T d2pula1         112 DLSHLKIARKGLIEG-ENYPHLSQHIGEFLGKTLFYSSDY  150 (392)
T ss_dssp             CCTTSEEHHHHHHHT-CCCTTHHHHHHHHHHHHHHHTSTT
T ss_pred             ccCCcccchhhhccc-chhHHHHHHHHHHHHHHHHHhccc
Confidence            99876543 333333 233344444444444444555543