Diaphorina citri psyllid: psy4168

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
MEYMDKRAKRRKKKETYSNIFSLPNVQAAPPPPPPPPPLPPPPPMMGTTPPPMMGTPPPPPPMMGTPPPPPPMMGTTPHVLGPLYWTRLIVSPEIPSDTTPLWKELEEVPINNLEEFTELFSRQVTAQRPVTRKRQQKSSKVQNVARLIDSKRSQNVGILAQSLHIEFSEIESAIFNMDASVVSLEALQQIYDVRATDEEINLIRAHLASNSDLQLDKPEQFLADLADIPHFSERIACFMFEADFSDSIALIDSKLNNIKSVCEFLMKSEHLKKVIAIILSLGNFMNGGNRLRGQADGFGLEILPKLKDVRSKDNSVTLLHFIVRTYLRNSENPLNESLPVPEPGDVDRAASVVFDDIHSQLSTLAKKLDAVTISMNKVVQESKPDHMEPFRTKMESCVKTGKFKSVLKFYQYIPKGIPESDVTPKDLFMLWAPFCHDFKDFWKKEQDRIIKTK
cHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccHHHcccccccccEEEcccHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHcc
******************************************************************************HVLGPLYWTRLIVSPEIPSDTTPLWKELEEVPINNLEEFTELFS***************************DSKRSQNVGILAQSLHIEFSEIESAIFNMDASVVSLEALQQIYDVRATDEEINLIRAHLASNSDLQLDKPEQFLADLADIPHFSERIACFMFEADFSDSIALIDSKLNNIKSVCEFLMKSEHLKKVIAIILSLGNFMNGGNRLRGQADGFGLEILPKLKDVRSKDNSVTLLHFIVRTYLRNSENPLNESLPVPEPGDVDRAASVVFDDIHSQLSTLAKKLDAVTISM******************MESCVKTGKFKSVLKFYQYIPKGIPESDVTPKDLFMLWAPFCHDFKDFWKKEQDR*****
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MEYMDKRAKRRKKKETYSNIFSLPNVQAAPPPPPPPPPLPPPPPMMGTTPPPMMGTPPPPPPMMGTPPPPPPMMGTTPHVLGPLYWTRLIVSPEIPSDTTPLWKELEEVPINNLEEFTELFSRQVTAQRPVTRKRQQKSSKVQNVARLIDSKRSQNVGILAQSLHIEFSEIESAIFNMDASVVSLEALQQIYDVRATDEEINLIRAHLASNSDLQLDKPEQFLADLADIPHFSERIACFMFEADFSDSIALIDSKLNNIKSVCEFLMKSEHLKKVIAIILSLGNFMNGGNRLRGQADGFGLEILPKLKDVRSKDNSVTLLHFIVRTYLRNSENPLNESLPVPEPGDVDRAASVVFDDIHSQLSTLAKKLDAVTISMNKVVQESKPDHMEPFRTKMESCVKTGKFKSVLKFYQYIPKGIPESDVTPKDLFMLWAPFCHDFKDFWKKEQDRIIKTK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030838 [BP]positive regulation of actin filament polymerizationprobableGO:0033043, GO:0051128, GO:0008064, GO:0071840, GO:0050789, GO:0044699, GO:0030832, GO:0030833, GO:0051495, GO:0051493, GO:0016043, GO:0090066, GO:0065007, GO:0032271, GO:0032273, GO:0048518, GO:0065008, GO:0051130, GO:0009987, GO:0032970, GO:0031334, GO:0050794, GO:0044763, GO:0032956, GO:0043254, GO:0010638, GO:0044087, GO:0008150, GO:0032535, GO:0048522

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3OBV, chain E
Confidence level:very confident
Coverage over the Query: 79-132,153-453
View the alignment between query and template
View the model in PyMOL
Template: 1M2V, chain B
Confidence level:probable
Coverage over the Query: 69-81
View the alignment between query and template
View the model in PyMOL