Diaphorina citri psyllid: psy4183

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------90
MSFDLPTFVQIYKRVRSSHLALKVLFHVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTSQLIYLLFSQCGGLSMDLCSSSVLPSGSFGLVFQTPLIHSLKHDYHNSWLNFFHNKIPLHTFYDSEEGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQCCWSSNETSFEDTGNCSQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLFASLAAGLVRMFAPYACGSGIPEQNYSDVEGSSLVVYVGKSGHSSSKSCGRIMLAVSAGLSLRKGRTPWFTLRPCIGNILSYLFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTKAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGLFIPSLCLGGIVGRIVGIGMQQLAFHYPHIWIFAGECSTNDCITPGLYAMVGAAAVLGGVTRMTGNILSYLFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTSQLIYLLFSQCGGVSYNNGLCDYVINHNATSTSNPTTSEAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGLFIPSLCLGGIVGRIVGIGMQQLAFHYPHIWIFAGECSTNDCITPGLYAMVGAAAVLGGVTRMT
cccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEccccccccccccccccccccccHHHHHHccccccccccccEEHHHHHHHHHHHccccccccHHHHHHHHHHHccccEEEEcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccCEEEEcCCccccccccHHHHHHHHHHHHcccccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcHHHHHHHHHHHHccccEEECccccccccccccHHHHHHHHHHHHcccccc
*SFDLPTFVQIYKRVRSSHLALKVLFHVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTSQLIYLLFSQCGGLSMDLCSSSVLPSGSFGLVFQTPLIHSLKHDYHNSWLNFFHNKIPLHTFYDSEEGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQCCWSSNETSFEDTGNCSQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLFASLAAGLVRMFAPYACGSGIPEQNYSDVEGSSLVVYVGKSGHSSSKSCGRIMLAVSAGLSLRKGRTPWFTLRPCIGNILSYLFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTKAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGLFIPSLCLGGIVGRIVGIGMQQLAFHYPHIWIFAGECSTNDCITPGLYAMVGAAAVLGGVTRMTGNILSYLFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTSQLIYLLFSQCGGVSYNNGLCDYVINHNATSTSNPTTSEAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGLFIPSLCLGGIVGRIVGIGMQQLAFHYPHIWIFAGECSTNDCITPGLYAMVGAAAVLGGVTRMT
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxx
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MSFDLPTFVQIYKRVRSSHLALKVLFHVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTSQLIYLLFSQCGGLSMDLCSSSVLPSGSFGLVFQTPLIHSLKHDYHNSWLNFFHNKIPLHTFYDSEEGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQCCWSSNETSFEDTGNCSQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLFASLAAGLVRMFAPYACGSGIPEQNYSDVEGSSLVVYVGKSGHSSSKSCGRIMLAVSAGLSLRKGRTPWFTLRPCIGNILSYLFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTKAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGLFIPSLCLGGIVGRIVGIGMQQLAFHYPHIWIFAGECSTNDCITPGLYAMVGAAAVLGGVTRMTGNILSYLFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSINPFGNEHSVLFYVEYNKPWIFFELIPFVGLGVIGGIIAYIFIRLNLKWCRYRKMSRLGQYPVTEVLVITAITTLISFPNPFTRMSTSQLIYLLFSQCGGVSYNNGLCDYVINHNATSTSNPTTSEAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGLFIPSLCLGGIVGRIVGIGMQQLAFHYPHIWIFAGECSTNDCITPGLYAMVGAAAVLGGVTRMT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
H(+)/Cl(-) exchange transporter 3 Mediates the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the endosome and synaptic vesicle lumen, and may thereby affect vesicle trafficking and exocytosis. May play an important role in neuronal cell function through regulation of membrane excitability by protein kinase C. It could help neuronal cells to establish short-term memory.confidentQ9R279
H(+)/Cl(-) exchange transporter 3 Mediates the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the endosome and synaptic vesicle lumen, and may thereby affect vesicle trafficking and exocytosis. May play an important role in neuronal cell function through regulation of membrane excitability by protein kinase C. It could help neuronal cells to establish short-term memory.confidentP51790
H(+)/Cl(-) exchange transporter 3 Mediates the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the endosome and synaptic vesicle lumen, and may thereby affect vesicle trafficking and exocytosis. May play an important role in neuronal cell function through regulation of membrane excitability by protein kinase C. It could help neuronal cells to establish short-term memory.confidentO18894

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0045177 [CC]apical part of cellprobableGO:0005575, GO:0044464, GO:0005623
GO:0005768 [CC]endosomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0016020 [CC]membraneprobableGO:0005575
GO:0006821 [BP]chloride transportprobableGO:0006811, GO:0006810, GO:0006820, GO:0044765, GO:0008150, GO:0015698, GO:0051234, GO:0051179, GO:0044699
GO:0005254 [MF]chloride channel activityprobableGO:0022891, GO:0022838, GO:0005215, GO:0008509, GO:0015108, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0015103, GO:0022892, GO:0022803, GO:0005253, GO:0005216

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ORG, chain A
Confidence level:very confident
Coverage over the Query: 433-560,613-674,692-772,810-864,877-882
View the alignment between query and template
View the model in PyMOL
Template: 3ORG, chain A
Confidence level:very confident
Coverage over the Query: 255-415,433-566,579-646
View the alignment between query and template
View the model in PyMOL