Diaphorina citri psyllid: psy423

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
MEPRIRRETGSPVMKSVLPYSPRSFRHTADWDINDSVIPRAGRRFELLTFERLPERLILEDGKVVNMSTLGHAQMVIHPGNRVLLVTEFNSWQEWADGHCRFVYPASSEEAKRHASGWAMRNTNNHNVHILKKSCLGVLVCSRRCVLPSGDSVHLRPAICDKARKKQTGKPCPNRKCTGRLEIMPCRGHCGYPVTHFWRHTDYGIFFQAKGVHDHLRPEAKSTSEARRSLGAGRRVRGLAVLLTREAALGNKCNY
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccHHHHcccEEEEEEcccccccEEEEEEEEEEEEccccccccccccEEEccHHHHHHHHHHcccccccccccccEEEEEcccccccccCEEEEEcccEEEEEEccccccccccccccHHHHHHHccccccccHHHHHHHHHHccccccc
****************************ADWDINDSVIPRAGRRFELLTFERLPERLILEDGKVVNMSTLGHAQMVIHPGNRVLLVTEFNSWQEWADGHCRFVYPASSEEAKRHASGWAMRNTNNHNVHILKKSCLGVLVCSRRCVLPSGDSVHLRPAICDK*********CPNRKCTGRLEIMPCRGHCGYPVTHFWRHTDYGIFFQAKGVH******************************************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEPRIRRETGSPVMKSVLPYSPRSFRHTADWDINDSVIPRAGRRFELLTFERLPERLILEDGKVVNMSTLGHAQMVIHPGNRVLLVTEFNSWQEWADGHCRFVYPASSEEAKRHASGWAMRNTNNHNVHILKKSCLGVLVCSRRCVLPSGDSVHLRPAICDKARKKQTGKPCPNRKCTGRLEIMPCRGHCGYPVTHFWRHTDYGIFFQAKGVHDHLRPEAKSTSEARRSLGAGRRVRGLAVLLTREAALGNKCNY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transcription factor glial cells missing Transcription factor that induces gliogenesis. It determines the choice between glial and neuronal fates. Also has a role in the differentiation of the plasmatocyte/macrophage lineage of hemocytes.confidentQ27403
Chorion-specific transcription factor GCMb Probable transcriptional regulator.confidentO75603
Chorion-specific transcription factor GCMb Probable transcriptional regulator.confidentO09102

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0060857 [BP]establishment of glial blood-brain barrierprobableGO:0032502, GO:0048856, GO:0007399, GO:0021782, GO:0009987, GO:0048869, GO:0030154, GO:0048468, GO:0042063, GO:0044767, GO:0032501, GO:0044763, GO:0060856, GO:0010001, GO:0048731, GO:0008150, GO:0022008, GO:0007275, GO:0044699, GO:0044707
GO:0031290 [BP]retinal ganglion cell axon guidanceprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0007411, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0048858, GO:0040011, GO:0048699, GO:0032990, GO:0009605, GO:0050896, GO:0048856, GO:0007399, GO:0048812, GO:0044763
GO:0060252 [BP]positive regulation of glial cell proliferationprobableGO:0042127, GO:0030154, GO:0050789, GO:0044699, GO:0014015, GO:0014013, GO:0048869, GO:0060284, GO:0050769, GO:0065007, GO:0010720, GO:0048518, GO:0008284, GO:0032501, GO:0050767, GO:0050793, GO:0009987, GO:0060251, GO:0050794, GO:0045597, GO:0045595, GO:0008150, GO:0051239, GO:0022008, GO:0048699, GO:0044707, GO:0007399, GO:0051094, GO:0048856, GO:0044763, GO:0032502, GO:0051960, GO:2000026, GO:0007275, GO:0048731, GO:0048522
GO:0007403 [BP]glial cell fate determinationprobableGO:0032502, GO:0044707, GO:0045165, GO:0021781, GO:0007399, GO:0009987, GO:0048869, GO:0001709, GO:0042063, GO:0032501, GO:0044763, GO:0010001, GO:0048731, GO:0030154, GO:0008150, GO:0022008, GO:0007275, GO:0044699, GO:0048856
GO:0005667 [CC]transcription factor complexprobableGO:0043234, GO:0044446, GO:0032991, GO:0005575, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0042690 [BP]negative regulation of crystal cell differentiationprobableGO:0051093, GO:0008150, GO:0050793, GO:0065007, GO:0050794, GO:0050789, GO:0045596, GO:0045595, GO:0042689, GO:0002682, GO:0002683, GO:0051239, GO:0048519, GO:0045610, GO:0045611, GO:0048523
GO:0035169 [BP]lymph gland plasmatocyte differentiationprobableGO:0032502, GO:0035168, GO:0048569, GO:0035167, GO:0035166, GO:0009791, GO:0002164, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0048534, GO:0002520, GO:0042387, GO:0042386, GO:0030154, GO:0032501, GO:0009987, GO:0048731, GO:0044767, GO:0044763, GO:0030097, GO:0048542, GO:0044707, GO:0048856, GO:0002376, GO:0008150, GO:0048732
GO:0035165 [BP]embryonic crystal cell differentiationprobableGO:0048568, GO:0030154, GO:0035163, GO:0035162, GO:0009790, GO:0007275, GO:0044699, GO:0048869, GO:0042688, GO:0048513, GO:0048534, GO:0032502, GO:0042386, GO:0032501, GO:0009987, GO:0044767, GO:0008150, GO:0030097, GO:0002520, GO:0044707, GO:0048856, GO:0044763, GO:0002376, GO:0048731
GO:0035164 [BP]embryonic plasmatocyte differentiationprobableGO:0032502, GO:0048568, GO:0030154, GO:0035163, GO:0035162, GO:0009790, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0048534, GO:0042387, GO:0042386, GO:0032501, GO:0009987, GO:0044767, GO:0008150, GO:0030097, GO:0002520, GO:0044707, GO:0048856, GO:0044763, GO:0002376, GO:0048731
GO:0048813 [BP]dendrite morphogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0016358, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0048812, GO:0044763
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0071310 [BP]cellular response to organic substanceprobableGO:0051716, GO:0050896, GO:0009987, GO:0008150, GO:0044763, GO:0070887, GO:0042221, GO:0010033, GO:0044699
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071
GO:0045944 [BP]positive regulation of transcription from RNA polymerase II promoterprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0045893, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0048522
GO:0045687 [BP]positive regulation of glial cell differentiationprobableGO:0030154, GO:0050789, GO:0045685, GO:0014015, GO:0014013, GO:0048869, GO:0060284, GO:0050769, GO:0008150, GO:0065007, GO:0044699, GO:0010720, GO:0048518, GO:0032502, GO:0032501, GO:0050767, GO:0050793, GO:0009987, GO:0050794, GO:0045597, GO:0045595, GO:0044763, GO:0051239, GO:0022008, GO:0048699, GO:0044707, GO:0007399, GO:0051094, GO:0048856, GO:0051960, GO:2000026, GO:0007275, GO:0048731, GO:0048522
GO:0008283 [BP]cell proliferationprobableGO:0008150, GO:0044699
GO:0060018 [BP]astrocyte fate commitmentprobableGO:0032502, GO:0044707, GO:0045165, GO:0021781, GO:0007399, GO:0009987, GO:0048869, GO:0030154, GO:0048856, GO:0048708, GO:0042063, GO:0008150, GO:0032501, GO:0044763, GO:0010001, GO:0048731, GO:0022008, GO:0007275, GO:0044699, GO:0007417

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ODH, chain A
Confidence level:very confident
Coverage over the Query: 29-41,86-232
View the alignment between query and template
View the model in PyMOL