Diaphorina citri psyllid: psy4259


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
MGMLAHDISDITQNQWQQTVSHLDVQEEVKQLKEKIQSEKGSEYLAEYQKLIYAGKILSDDQALSEYNIDESKFIVVMLSKPKPTPAPYSGPSDPTQPAGQESEATRPATATSDSMLKVFFERVNPYGGESEDPLAFLRTQPQFQQMRTVVQQNPELLPTVLQQIGQSNPALLELISHNQEAFVRMLNEPVAGDRRNKNVLGT
ccccccEEEEEEEEccccEEEEEccccHHHHHHHHHHHHHccccccccEEEEEccccccccHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccHHHccccHHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHcHHHHHHHHcccccccccccccccc
*****HD**DITQNQWQQTVSHLDVQEEVKQLKEKIQSEKGSEYLAEYQKLIYAGKILSDDQALSEYNIDESKFIVVML********************************************VNPYGGESEDPLAFLRTQP******TVVQ*NPELLPTVLQQIGQSNPALLELISHNQEAFVRM*****************
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MGMLAHDISDITQNQWQQTVSxxxxxxxxxxxxxxxxxxxxxEYLAEYQKLIYAGKILSDDQALSEYNIDESKFIVVMLSKPKPTPAPYSGPSDPTQPAGQESEATRPATATSDSMLKVFFERVNPYGGESEDPLAFLRTQPQFQQMRTVVQQNPELLPTVLQQIGQSNPALLELISHNQEAFVRMLNEPVAGDRRNKNVLGT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0032434 [BP]regulation of proteasomal ubiquitin-dependent protein catabolic processprobableGO:0009894, GO:0032268, GO:0080090, GO:0031329, GO:0060255, GO:0061136, GO:0031323, GO:0051246, GO:0050794, GO:0008150, GO:0042176, GO:0030162, GO:0065007, GO:0019222, GO:0050789
GO:0071942 [CC]XPC complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0000109, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0031593 [MF]polyubiquitin bindingprobableGO:0003674, GO:0043130, GO:0032182, GO:0005488, GO:0005515
GO:0070628 [MF]proteasome bindingprobableGO:0032403, GO:0003674, GO:0005488, GO:0005515
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1OQY, chain A
Confidence level:very confident
Coverage over the Query: 6-193
View the alignment between query and template
View the model in PyMOL