Diaphorina citri psyllid: psy4302

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610---
MEEAEKIGLCARPCDGAKPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAHMGSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPPEFPTCNNYLPPVDPNEFKNIDWDDEPTLQT
ccccccccccccccccccccEEEEEEEEEHHHHccccccccccCEEEEEEEEEECccccccccEEEEccccccccEEEECccEEEEEEEEcccccccEEEEccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccEEEEEEccccccccccccccccccccEEEEccccccccccccccccccccccccccEEcccccccccccccccccccEEEEECcccEEEEEEEEcccccccEEEEEcccEEEEEEEccccccEEEEcEEEEcccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCccccccccccccccCECcccccEEEEECccCCcccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEccccccccccccccccccccEEEECcccccccccccccHHHHHHHcccccccccccccccccccEEEcccccEEEEEEEcccccccHHccccHHHHHcccHEEEEEccccccccccccccccccccccccccccccccccccccccc
******IGLCARPCDGAKPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAHMGSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPPEFPTCNNYLPPVDPNEFKNIDW********
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MEEAEKIGLCARPCDGAKPMVCYYHFTLENYATIGPACGNCINGTMDDCFKKGCVTADGVERPILTINRRLPSPSIQVCRGDTIVVDVKNKIVDRVVTIHWHGVYQRHTPHSDGVPLLTQCPIIPETTYRYKFPAMPYGTFFYHSHIGFQKMDGLEGPLVIRRPKKADPNRDQYDTDYPSHTIIITDWLHGMTDAKFPGNTYANFGTRTESFLINGRSVFKSGNGTSNPVPYSKFKVNKGLRHRFRIIGGSCLACPMLFFVEKHRMNLITVDGTPVQPQMFDSITIFPGQYTPVNSAIVLNINLDAAHMGSRRDRLNILRLRKSLNALDSSDCSDTNPNVCWNHVNSLTPATEKATVLKAVPDIRLVFAVDEYHFTRDSLFWNDEDEYHRWFQSSPNVIKTHVTNNISLGILPFPILSQDLPIPKEMECPKDRSVCGKSAEKGGKLCECVEIIKVGLNQVAEIIFIDWIGPTSTFLHPMHLHGTDIYIIEQGIIPVAEDHRAFVGKLQERLAREGPDLATKIRPQPCVKDTVTIPPNGYTVVRVHFNNPGIWIMHCHFIFHTETGMNTVFQVGDRKDFVQTPPEFPTCNNYLPPVDPNEFKNIDWDDEPTLQT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009505 [CC]plant-type cell wallprobableGO:0005618, GO:0044464, GO:0005623, GO:0030312, GO:0005575, GO:0071944

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2J5W, chain A
Confidence level:very confident
Coverage over the Query: 20-219,230-323
View the alignment between query and template
View the model in PyMOL
Template: 3ZX1, chain A
Confidence level:very confident
Coverage over the Query: 17-32,54-219,233-413,450-498,522-573
View the alignment between query and template
View the model in PyMOL
Template: 3SQR, chain A
Confidence level:very confident
Coverage over the Query: 13-373,396-428,447-499,515-597
View the alignment between query and template
View the model in PyMOL
Template: 1AOZ, chain A
Confidence level:very confident
Coverage over the Query: 19-31,54-375,397-599
View the alignment between query and template
View the model in PyMOL
Template: 3GYR, chain A
Confidence level:confident
Coverage over the Query: 55-219,233-409,448-578
View the alignment between query and template
View the model in PyMOL