Psyllid ID: psy4332

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MGMLRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHccccccHHHHcccccccccccEEEEcccccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccEEccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHEEEcccccEEEcccccccHHHHHHcEEHHHccEEcHHHccHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mgmlrhrpqasnlavvpllrnkngvehsslkkkcikifdfknclvgkkfeikisdfatdsdmfssdyyrvhdntslpirwMAWESVRLRkfttksdvwsFGVTLWEILNLArhrpyegltdlEVLENIshlhaddgefiylptpqttKDILDLMNEcwkrspterpsftEIHLFLQRknlgyvppmns
Flexible Loop (DISEMBL)
mgmlrhrpqasnlavvpllrnkngvehsslkkkcikifdfknclvGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFttksdvwsfgVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLflqrknlgyvppmns
Low Complexity Region (SEG)
MGMLRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS
Disordered region (IsUnstruct)
*************AVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGY******
Disordered Region (DISOPRED)
*************AVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD**FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKN*********
Disordered Region (DISEMBL)
MGMLRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS
Disordered Region (DISPRO)
**M*RHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGY******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGMLRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	188	2.2.26 [Sep-21-2011]
Q62371	854	Discoidin domain-containi	yes	N/A	0.739	0.162	0.5	4e-38
Q63474	910	Epithelial discoidin doma	no	N/A	0.760	0.157	0.486	7e-38
Q03146	911	Epithelial discoidin doma	no	N/A	0.760	0.156	0.486	1e-37
Q16832	855	Discoidin domain-containi	yes	N/A	0.739	0.162	0.492	1e-37
Q7YR43	909	Epithelial discoidin doma	no	N/A	0.760	0.157	0.472	6e-37
Q08345	913	Epithelial discoidin doma	no	N/A	0.760	0.156	0.472	6e-37
Q3UFB7	799	High affinity nerve growt	no	N/A	0.723	0.170	0.427	6e-28
P35739	799	High affinity nerve growt	no	N/A	0.723	0.170	0.427	6e-28
Q91987	818	BDNF/NT-3 growth factors	no	N/A	0.723	0.166	0.455	7e-28
P04629	796	High affinity nerve growt	no	N/A	0.728	0.172	0.417	2e-27

>sp|Q62371|DDR2_MOUSE Discoidin domain-containing receptor 2 OS=Mus musculus GN=Ddr2 PE=1 SV=2

 Score =  157 bits (397), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 70/140 (50%), Positives = 89/140 (63%), Gaps = 1/140 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct: 713 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAF 772

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           GVTLWE     + +PY  L+D +V+EN      D G  IYLP P    D +  LM  CW+
Sbjct: 773 GVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPDSVYKLMLSCWR 832

Query: 160 RSPTERPSFTEIHLFLQRKN 179
           R    RPSF EIHL L ++ 
Sbjct: 833 RETKHRPSFQEIHLLLLQQG 852

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 0EC: .EC: 1

>sp|Q63474|DDR1_RAT Epithelial discoidin domain-containing receptor 1 OS=Rattus norvegicus GN=Ddr1 PE=2 SV=1

 Score =  156 bits (395), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 70/144 (48%), Positives = 91/144 (63%), Gaps = 1/144 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct: 767 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 826

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P      L +LM  CW 
Sbjct: 827 GVTLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQTLYELMLRCWS 886

Query: 160 RSPTERPSFTEIHLFLQRKNLGYV 183
           R P +RP F+++H FL    L  V
Sbjct: 887 REPEQRPPFSQLHRFLADDALNTV 910

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q03146|DDR1_MOUSE Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2

 Score =  156 bits (394), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/144 (48%), Positives = 90/144 (62%), Gaps = 1/144 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct: 768 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 827

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P      L +LM  CW 
Sbjct: 828 GVTLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQTLYELMLRCWS 887

Query: 160 RSPTERPSFTEIHLFLQRKNLGYV 183
           R P +RP F ++H FL    L  V
Sbjct: 888 REPEQRPPFAQLHRFLADDALNTV 911

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing, but also tumor cell invasion. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Phosphorylates PTPN11 (By similarity). Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q16832|DDR2_HUMAN Discoidin domain-containing receptor 2 OS=Homo sapiens GN=DDR2 PE=1 SV=2

 Score =  155 bits (392), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 1/140 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct: 714 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAF 773

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           GVTLWE     + +PY  L+D +V+EN      D G   YLP P    D +  LM  CW+
Sbjct: 774 GVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWR 833

Query: 160 RSPTERPSFTEIHLFLQRKN 179
           R    RPSF EIHL L ++ 
Sbjct: 834 RDTKNRPSFQEIHLLLLQQG 853

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q7YR43|DDR1_PANTR Epithelial discoidin domain-containing receptor 1 OS=Pan troglodytes GN=DDR1 PE=3 SV=1

 Score =  153 bits (387), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 1/144 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct: 766 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 825

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P    + + +LM  CW 
Sbjct: 826 GVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWS 885

Query: 160 RSPTERPSFTEIHLFLQRKNLGYV 183
           R   +RP F+++H FL    L  V
Sbjct: 886 RESEQRPPFSQLHRFLAEDALNTV 909

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q08345|DDR1_HUMAN Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1

 Score =  153 bits (387), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 1/144 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct: 770 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 829

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P    + + +LM  CW 
Sbjct: 830 GVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWS 889

Query: 160 RSPTERPSFTEIHLFLQRKNLGYV 183
           R   +RP F+++H FL    L  V
Sbjct: 890 RESEQRPPFSQLHRFLAEDALNTV 913

Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing (By similarity). Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q3UFB7|NTRK1_MOUSE High affinity nerve growth factor receptor OS=Mus musculus GN=Ntrk1 PE=1 SV=2

 Score =  123 bits (309), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/145 (42%), Positives = 85/145 (58%), Gaps = 9/145 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKF+T+SDVWSF
Sbjct: 657 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFSTESDVWSF 716

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ E +E I+      G  +  P      D+  +M  CW+R
Sbjct: 717 GVVLWEIFTYGK-QPWYQLSNTEAIECITQ-----GRELERPR-ACPPDVYAIMRGCWQR 769

Query: 161 SPTERPSFTEIHLFLQRKNLGYVPP 185
            P +R S  ++H  LQ   L   PP
Sbjct: 770 EPQQRLSMKDVHARLQA--LAQAPP 792

Receptor tyrosine kinase involved in the development and the maturation of the central and peripheral nervous systems through regulation of proliferation, differentiation and survival of sympathetic and nervous neurons. High affinity receptor for NGF which is its primary ligand, it can also bind and be activated by NTF3/neurotrophin-3. However, NTF3 only supports axonal extension through NTRK1 but has no effect on neuron survival. Upon dimeric NGF ligand-binding, undergoes homodimerization, autophosphorylation and activation. Recruits, phosphorylates and/or activates several downstream effectors including SHC1, FRS2, SH2B1, SH2B2 and PLCG1 that regulate distinct overlapping signaling cascades driving cell survival and differentiation. Through SHC1 and FRS2 activates a GRB2-Ras-MAPK cascade that regulates cell differentiation and survival. Through PLCG1 controls NF-Kappa-B activation and the transcription of genes involved in cell survival. Through SHC1 and SH2B1 controls a Ras-PI3 kinase-AKT1 signaling cascade that is also regulating survival. In absence of ligand and activation, may promote cell death, making the survival of neurons dependent on trophic factors.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P35739|NTRK1_RAT High affinity nerve growth factor receptor OS=Rattus norvegicus GN=Ntrk1 PE=1 SV=1

 Score =  123 bits (309), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/145 (42%), Positives = 85/145 (58%), Gaps = 9/145 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKF+T+SDVWSF
Sbjct: 657 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFSTESDVWSF 716

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ E +E I+      G  +  P      D+  +M  CW+R
Sbjct: 717 GVVLWEIFTYGK-QPWYQLSNTEAIECITQ-----GRELERPR-ACPPDVYAIMRGCWQR 769

Query: 161 SPTERPSFTEIHLFLQRKNLGYVPP 185
            P +R S  ++H  LQ   L   PP
Sbjct: 770 EPQQRLSMKDVHARLQA--LAQAPP 792

Receptor tyrosine kinase involved in the development and the maturation of the central and peripheral nervous systems through regulation of proliferation, differentiation and survival of sympathetic and nervous neurons. High affinity receptor for NGF which is its primary ligand, it can also bind and be activated by NTF3/neurotrophin-3. However, NTF3 only supports axonal extension through NTRK1 but has no effect on neuron survival. Upon dimeric NGF ligand-binding, undergoes homodimerization, autophosphorylation and activation. Recruits, phosphorylates and/or activates several downstream effectors including SHC1, FRS2, SH2B1, SH2B2 and PLCG1 that regulate distinct overlapping signaling cascades driving cell survival and differentiation. Through SHC1 and FRS2 activates a GRB2-Ras-MAPK cascade that regulates cell differentiation and survival. Through PLCG1 controls NF-Kappa-B activation and the transcription of genes involved in cell survival. Through SHC1 and SH2B1 controls a Ras-PI3 kinase-AKT1 signaling cascade that is also regulating survival. In absence of ligand and activation, may promote cell death, making the survival of neurons dependent on trophic factors.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|Q91987|NTRK2_CHICK BDNF/NT-3 growth factors receptor OS=Gallus gallus GN=NTRK2 PE=1 SV=1

 Score =  123 bits (309), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 11/147 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV  +T LPIRWM  ES+  RKFTT+SDVWS 
Sbjct: 676 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 735

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GV LWEI    + +P+  L++ EV+E I+           L  P+T  K++ DLM  CW+
Sbjct: 736 GVVLWEIFTYGK-QPWYQLSNNEVIECITQGRV-------LQRPRTCPKEVYDLMLGCWQ 787

Query: 160 RSPTERPSFTEIHLFLQRKNLGYVPPM 186
           R P  R +  EIH  LQ  NL    P+
Sbjct: 788 REPHMRLNIKEIHSLLQ--NLAKASPV 812

Receptor tyrosine kinase involved in the development and the maturation of the central and the peripheral nervous systems through regulation of neuron survival, proliferation, migration, differentiation, and synapse formation and plasticity. Receptor for BDNF/brain-derived neurotrophic factor and NTF4/neurotrophin-4. Alternatively can also bind NTF3/neurotrophin-3 which is less efficient in activating the receptor but regulates neuron survival through NTRK2. Upon ligand-binding, undergoes homodimerization, autophosphorylation and activation. Recruits, phosphorylates and/or activates several downstream effectors that regulate distinct overlapping signaling cascades. Activates the GRB2-Ras-MAPK cascade that regulates for instance neuronal differentiation including neurite outgrowth. Controls the Ras-PI3 kinase-AKT1 signaling cascade that mainly regulates growth and survival. Through the downstream protein kinase C-regulated pathways controls synaptic plasticity. Thereby, plays a role in learning and memory by regulating both short term synaptic function and long-term potentiation. Also regulates the transcription of genes involved in cell survival. Hence, it is able to suppress anoikis, the apoptosis resulting from loss of cell-matrix interactions. May also play a role in neutrophin-dependent calcium signaling in glial cells.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

>sp|P04629|NTRK1_HUMAN High affinity nerve growth factor receptor OS=Homo sapiens GN=NTRK1 PE=1 SV=4

 Score =  121 bits (304), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 654 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 713

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ E ++ I+      G  +  P      ++  +M  CW+R
Sbjct: 714 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPR-ACPPEVYAIMRGCWQR 766

Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
            P +R S  ++H  LQ   L   PP+
Sbjct: 767 EPQQRHSIKDVHARLQA--LAQAPPV 790

Isoform TrkA-III is resistant to NGF, constitutively activates AKT1 and NF-kappa-B and is unable to activate the Ras-MAPK signaling cascade. Antagonizes the anti-proliferative NGF-NTRK1 signaling that promotes neuronal precursors differentiation. Isoform TrkA-III promotes angiogenesis and has oncogenic activity when overexpressed.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
242022560	876	discoidin domain receptor, putative [Ped	0.765	0.164	0.641	5e-53
270003145	992	hypothetical protein TcasGA2_TC001579 [T	0.765	0.145	0.625	3e-52
91094051	935	PREDICTED: similar to CG34380 CG34380-PC	0.765	0.154	0.625	3e-52
328724021	922	PREDICTED: discoidin domain-containing r	0.765	0.156	0.618	1e-51
443715384	917	hypothetical protein CAPTEDRAFT_155564 [	0.776	0.159	0.564	1e-45
307171884	532	Epithelial discoidin domain-containing r	0.765	0.270	0.559	3e-45
340716328	944	PREDICTED: discoidin domain-containing r	0.765	0.152	0.561	4e-45
350406222	944	PREDICTED: discoidin domain-containing r	0.765	0.152	0.555	9e-45
270003120	932	hypothetical protein TcasGA2_TC001551 [T	0.781	0.157	0.547	3e-44
321454737	868	hypothetical protein DAPPUDRAFT_303380 [	0.765	0.165	0.606	4e-44

>gi|242022560|ref|XP_002431708.1| discoidin domain receptor, putative [Pediculus humanus corporis] gi|212517016|gb|EEB18970.1| discoidin domain receptor, putative [Pediculus humanus corporis]

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 93/145 (64%), Positives = 118/145 (81%), Gaps = 1/145 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCL+GK +++KISDF TD+++++ DYY+V  + +LPIRWMAWES+ + K+TTKSDVWSF
Sbjct: 730 RNCLIGKAYQVKISDFGTDNELYAGDYYKVDGSLALPIRWMAWESMYMGKYTTKSDVWSF 789

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWK 159
            VTLWEILN  R  PYE + D  V+EN+SHLH +DG+F+YLP P T TKD+ DLM ECW+
Sbjct: 790 AVTLWEILNFGRRIPYETMNDPRVVENVSHLHLNDGQFVYLPRPPTSTKDLYDLMCECWR 849

Query: 160 RSPTERPSFTEIHLFLQRKNLGYVP 184
           R+  ERPSF EIHLFLQRKNLGY P
Sbjct: 850 RNDHERPSFREIHLFLQRKNLGYAP 874

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003145|gb|EEZ99592.1| hypothetical protein TcasGA2_TC001579 [Tribolium castaneum]

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 90/144 (62%), Positives = 114/144 (79%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCL+GK ++IKI DF T ++++ +DYY+V  NT LPIRWMAWESV   ++TTKSDVW+F
Sbjct: 848 RNCLIGKGYQIKICDFGTYNELYINDYYKVDGNTPLPIRWMAWESVYQTRYTTKSDVWAF 907

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
            VTLWEIL L R  PY+ L D EV+EN++H+H DDG+++YLP P  +KDI DLM ECW+R
Sbjct: 908 AVTLWEILTLCRRPPYDSLPDPEVMENLAHMHCDDGQYMYLPRPTASKDIYDLMLECWRR 967

Query: 161 SPTERPSFTEIHLFLQRKNLGYVP 184
              ERPSF EIH+FLQRKNLGY P
Sbjct: 968 KDVERPSFREIHIFLQRKNLGYAP 991

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094051|ref|XP_968938.1| PREDICTED: similar to CG34380 CG34380-PC [Tribolium castaneum]

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 90/144 (62%), Positives = 114/144 (79%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCL+GK ++IKI DF T ++++ +DYY+V  NT LPIRWMAWESV   ++TTKSDVW+F
Sbjct: 791 RNCLIGKGYQIKICDFGTYNELYINDYYKVDGNTPLPIRWMAWESVYQTRYTTKSDVWAF 850

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
            VTLWEIL L R  PY+ L D EV+EN++H+H DDG+++YLP P  +KDI DLM ECW+R
Sbjct: 851 AVTLWEILTLCRRPPYDSLPDPEVMENLAHMHCDDGQYMYLPRPTASKDIYDLMLECWRR 910

Query: 161 SPTERPSFTEIHLFLQRKNLGYVP 184
              ERPSF EIH+FLQRKNLGY P
Sbjct: 911 KDVERPSFREIHIFLQRKNLGYAP 934

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328724021|ref|XP_003248013.1| PREDICTED: discoidin domain-containing receptor 2-like isoform 2 [Acyrthosiphon pisum] gi|328724023|ref|XP_001946164.2| PREDICTED: discoidin domain-containing receptor 2-like isoform 1 [Acyrthosiphon pisum]

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 89/144 (61%), Positives = 114/144 (79%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK +++KISDF TD++ +S+DYY++  N  LP+RWM+WES  L K++TKSDVWSF
Sbjct: 774 RNCLVGKAYKVKISDFGTDNEAYSADYYKLDGNLGLPVRWMSWESAFLDKYSTKSDVWSF 833

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
            VTLWEIL+LA+ RP+EG  D  V+EN+SH+H DDG F Y   P  ++DI DLM ECWKR
Sbjct: 834 AVTLWEILHLAKSRPFEGFADHRVVENLSHMHVDDGLFEYPARPACSRDIYDLMRECWKR 893

Query: 161 SPTERPSFTEIHLFLQRKNLGYVP 184
             ++RP+F EIHLFLQRKNLGY P
Sbjct: 894 QESDRPTFREIHLFLQRKNLGYAP 917

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443715384|gb|ELU07385.1| hypothetical protein CAPTEDRAFT_155564 [Capitella teleta]

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 83/147 (56%), Positives = 108/147 (73%), Gaps = 1/147 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG  + IKI+DF     ++S+DYY++  NT LPIRWMAWES+ L KF+TKSDVWSF
Sbjct: 764 RNCLVGHNYAIKIADFGMSRSLYSTDYYKIEGNTVLPIRWMAWESLLLGKFSTKSDVWSF 823

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GVTLWE+L LA+  PYEGL+D +V+ N +  +  +G  I LP P T  ++I DLM ECW 
Sbjct: 824 GVTLWEVLTLAKEHPYEGLSDDQVIANCNQCYLGNGLDIVLPQPATCPREIYDLMVECWN 883

Query: 160 RSPTERPSFTEIHLFLQRKNLGYVPPM 186
           R    RPSF EIH+FLQRKN+G++P +
Sbjct: 884 RDEVARPSFREIHMFLQRKNMGFLPTL 910

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|307171884|gb|EFN63526.1| Epithelial discoidin domain-containing receptor 1 [Camponotus floridanus]

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/161 (55%), Positives = 112/161 (69%), Gaps = 17/161 (10%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKISDF TD+++++ DYY+V     LP+RWMAWES+ L K+TTKSDVW+F
Sbjct: 370 RNCLVGKAYHIKISDFGTDNELYACDYYKVDGTMPLPVRWMAWESIFLGKYTTKSDVWAF 429

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLH---------ADDG-------EFIYLPTP 144
            VTLWEILNL R  PYE L+D EV++++  LH          +DG        F YLP P
Sbjct: 430 AVTLWEILNLGRRVPYEHLSDEEVVQSLRQLHHAADCNNVNPEDGCKEDSRNVFDYLPRP 489

Query: 145 -QTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVP 184
             ++KDI DLM ECW+R   ERP+F EI LFLQRKNLGY P
Sbjct: 490 TASSKDIYDLMLECWRREENERPTFREISLFLQRKNLGYAP 530

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716328|ref|XP_003396651.1| PREDICTED: discoidin domain-containing receptor 2-like [Bombus terrestris]

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/162 (56%), Positives = 113/162 (69%), Gaps = 18/162 (11%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKISDF TD+++++SDYY+V     LPIRWMAWES+ L K+TTKSDVW+F
Sbjct: 781 RNCLVGKAYHIKISDFGTDNELYASDYYKVDGTVPLPIRWMAWESIFLGKYTTKSDVWAF 840

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHA------DDGE-----------FIYLPT 143
            VTLWEILNL R  PYE L++ EV++++  LH        DGE           F YLP 
Sbjct: 841 AVTLWEILNLGRRVPYEHLSNEEVVQSLRRLHRATECTDADGENSGCKENTDNLFNYLPQ 900

Query: 144 PQT-TKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVP 184
           P   +KDI DLM +CW+R  TERP+F EI +FLQRKNLGY P
Sbjct: 901 PTACSKDIYDLMLDCWRREETERPTFREISMFLQRKNLGYAP 942

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406222|ref|XP_003487697.1| PREDICTED: discoidin domain-containing receptor 2-like [Bombus impatiens]

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 90/162 (55%), Positives = 113/162 (69%), Gaps = 18/162 (11%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKISDF TD+++++SDYY+V     LPIRWMAWES+ L K+TTKSDVW+F
Sbjct: 781 RNCLVGKAYHIKISDFGTDNELYASDYYKVDGTVPLPIRWMAWESIFLGKYTTKSDVWAF 840

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHA------DDGE-----------FIYLPT 143
            VTLWEILNL R  PYE L++ EV++++  LH        DGE           F YLP 
Sbjct: 841 AVTLWEILNLGRRVPYEHLSNEEVVQSLRRLHRATECTDADGENSGCKENTDNLFNYLPQ 900

Query: 144 PQT-TKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVP 184
           P   +KDI DLM +CW+R  +ERP+F EI +FLQRKNLGY P
Sbjct: 901 PTACSKDIYDLMLDCWRREESERPTFREISMFLQRKNLGYAP 942

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003120|gb|EEZ99567.1| hypothetical protein TcasGA2_TC001551 [Tribolium castaneum]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 81/148 (54%), Positives = 113/148 (76%), Gaps = 1/148 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+++EIK+SD  +   M+SSDY ++ ++  LP+RWMAWESV L KF+ KSDVWSF
Sbjct: 785 RNCLVGRRYEIKVSDLGSYRRMYSSDYCQIGESRPLPLRWMAWESVLLGKFSGKSDVWSF 844

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP-QTTKDILDLMNECWK 159
            V LWEI+  AR +P+E L+D +V+EN++H + DDG+ + L  P    K+I DLM ECW+
Sbjct: 845 AVLLWEIMTFAREQPFEELSDDKVIENVTHFYQDDGKHVLLSPPINCPKEIFDLMCECWQ 904

Query: 160 RSPTERPSFTEIHLFLQRKNLGYVPPMN 187
           R+ ++RP+F EIHLFLQRKNLGY P ++
Sbjct: 905 RNESDRPNFREIHLFLQRKNLGYNPELH 932

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321454737|gb|EFX65895.1| hypothetical protein DAPPUDRAFT_303380 [Daphnia pulex]

 Score =  182 bits (463), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 91/150 (60%), Positives = 105/150 (70%), Gaps = 6/150 (4%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT-SLPIRWMAWESVRLRKFTTKSDVWS 99
           +NCLVGK  +IKI DF TDSD++  DYYR  +    LP+RWMAWESV   K+TTKSDVWS
Sbjct: 717 RNCLVGKGLQIKICDFGTDSDIYGLDYYRSEEQALGLPVRWMAWESVIQGKYTTKSDVWS 776

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLH----ADDGEFIYLPTPQ-TTKDILDLM 154
           F VTLWEIL LAR RPY+ L+D  V+EN+        A     + L  PQ   +DI DLM
Sbjct: 777 FAVTLWEILVLARQRPYQELSDEAVVENLQRFAQGTIASAPPCVSLARPQHCPRDIYDLM 836

Query: 155 NECWKRSPTERPSFTEIHLFLQRKNLGYVP 184
            ECW+R PTERPSF EIHLFLQRKNLGY P
Sbjct: 837 CECWRRLPTERPSFREIHLFLQRKNLGYSP 866

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
UNIPROTKB|F1MCM5	466	DDR1 "Tyrosine-protein kinase	0.718	0.289	0.492	4e-35
MGI|MGI:1345277	854	Ddr2 "discoidin domain recepto	0.718	0.158	0.514	4.3e-35
UNIPROTKB|F1S212	872	DDR2 "Uncharacterized protein"	0.936	0.201	0.426	4.6e-35
UNIPROTKB|F1MIE0	855	DDR2 "Uncharacterized protein"	0.909	0.2	0.434	5.6e-35
UNIPROTKB|E2RNZ4	866	DDR2 "Uncharacterized protein"	0.718	0.155	0.514	5.8e-35
UNIPROTKB|F1NG66	862	DDR2 "Uncharacterized protein"	0.723	0.157	0.503	7.3e-35
ZFIN|ZDB-GENE-090316-2	868	ddr2a "discoidin domain recept	0.702	0.152	0.526	7.4e-35
UNIPROTKB|F1PGJ7	921	DDR1 "Uncharacterized protein"	0.760	0.155	0.486	8.6e-35
UNIPROTKB|J9P5N9	947	DDR1 "Uncharacterized protein"	0.760	0.151	0.486	9.1e-35
UNIPROTKB|J3KQG8	378	DDR1 "Epithelial discoidin dom	0.760	0.378	0.472	1.3e-34

UNIPROTKB|F1MCM5 DDR1 "Tyrosine-protein kinase receptor" [Bos taurus (taxid:9913)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 67/136 (49%), Positives = 89/136 (65%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct:   323 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 382

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK-DILDLMNECWK 159
             GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P      + +LM  CW 
Sbjct:   383 GVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPLSLYELMLRCWS 442

Query:   160 RSPTERPSFTEIHLFL 175
             R P +RP F+++H FL
Sbjct:   443 REPEQRPPFSQLHRFL 458

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

MGI|MGI:1345277 Ddr2 "discoidin domain receptor family, member 2" [Mus musculus (taxid:10090)]

 Score = 389 (142.0 bits), Expect = 4.3e-35, P = 4.3e-35
 Identities = 70/136 (51%), Positives = 87/136 (63%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVGK + IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct:   713 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAF 772

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
             GVTLWE     + +PY  L+D +V+EN      D G  IYLP P    D +  LM  CW+
Sbjct:   773 GVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPDSVYKLMLSCWR 832

Query:   160 RSPTERPSFTEIHLFL 175
             R    RPSF EIHL L
Sbjct:   833 RETKHRPSFQEIHLLL 848

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001503 "ossification" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=ISO

GO:0005518 "collagen binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0030199 "collagen fibril organization" evidence=IMP

GO:0030500 "regulation of bone mineralization" evidence=ISO

GO:0031214 "biomineral tissue development" evidence=IMP

GO:0035988 "chondrocyte proliferation" evidence=IMP

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=ISO;IDA

GO:0038063 "collagen-activated tyrosine kinase receptor signaling pathway" evidence=ISO;IDA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISO

GO:0045860 "positive regulation of protein kinase activity" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IMP

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IMP

UNIPROTKB|F1S212 DDR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 389 (142.0 bits), Expect = 4.6e-35, P = 4.6e-35
 Identities = 81/190 (42%), Positives = 107/190 (56%)

Query:     5 RHRPQASNLAVVPLLRNKN----------GVEHSSLKKKCIKIFDFKNCLVGKKFEIKIS 54
             RH P  S+ + VP +   N          G+++ S      +    +NCLVGK + IKI+
Sbjct:   683 RHEPPNSSSSSVPTVSYANLKFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIA 742

Query:    55 DFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHR 114
             DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+FGVTLWE+    + +
Sbjct:   743 DFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEMFTFCQEQ 802

Query:   115 PYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
             PY  L+D +V+EN      D G   YLP P    D +  LM  CW+R    RPSF EIHL
Sbjct:   803 PYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRDTKHRPSFQEIHL 862

Query:   174 FLQ---RKNL 180
              L    +KNL
Sbjct:   863 LLLQQGKKNL 872

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|F1MIE0 DDR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 388 (141.6 bits), Expect = 5.6e-35, P = 5.6e-35
 Identities = 79/182 (43%), Positives = 102/182 (56%)

Query:     5 RHRPQASNLAVVPLLRNKN----------GVEHSSLKKKCIKIFDFKNCLVGKKFEIKIS 54
             RH P  S+ A VP +   N          G+++ S      +    +NCLVGK + IKI+
Sbjct:   668 RHEPPNSSSASVPTVSYANLKFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIA 727

Query:    55 DFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHR 114
             DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+FGVTLWE     + +
Sbjct:   728 DFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWETFTFCQEQ 787

Query:   115 PYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
             PY  L+D +V+EN      D G   YLP P    D +  LM  CW+R    RPSF EIHL
Sbjct:   788 PYSQLSDEQVIENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRDTKHRPSFQEIHL 847

Query:   174 FL 175
              L
Sbjct:   848 LL 849

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

UNIPROTKB|E2RNZ4 DDR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 388 (141.6 bits), Expect = 5.8e-35, P = 5.8e-35
 Identities = 70/136 (51%), Positives = 87/136 (63%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVGK + IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct:   725 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAF 784

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
             GVTLWE     + +PY  L+D +V+EN      D G  IYLP P    D +  LM  CW+
Sbjct:   785 GVTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPVICPDSVYKLMLSCWR 844

Query:   160 RSPTERPSFTEIHLFL 175
             R    RPSF EIHL L
Sbjct:   845 RDTKHRPSFQEIHLLL 860

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|F1NG66 DDR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 387 (141.3 bits), Expect = 7.3e-35, P = 7.3e-35
 Identities = 69/137 (50%), Positives = 89/137 (64%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVGK++ IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct:   720 RNCLVGKRYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAF 779

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
             GVTLWE   L R +PY  L+D +V+EN      D G   YLP P    D +  LM  CW+
Sbjct:   780 GVTLWETFTLCREQPYSQLSDEQVIENTGEFFRDQGRQTYLPKPALCPDSVYKLMLSCWR 839

Query:   160 RSPTERPSFTEIHLFLQ 176
             R   +RPSF ++H  LQ
Sbjct:   840 RDTKDRPSFQDLHRQLQ 856

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003416 "endochondral bone growth" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0031214 "biomineral tissue development" evidence=IEA

GO:0035988 "chondrocyte proliferation" evidence=IEA

GO:0038062 "protein tyrosine kinase collagen receptor activity" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045860 "positive regulation of protein kinase activity" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048146 "positive regulation of fibroblast proliferation" evidence=IEA

GO:0051091 "positive regulation of sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0090091 "positive regulation of extracellular matrix disassembly" evidence=IEA

ZFIN|ZDB-GENE-090316-2 ddr2a "discoidin domain receptor tyrosine kinase 2a" [Danio rerio (taxid:7955)]

 Score = 387 (141.3 bits), Expect = 7.4e-35, P = 7.4e-35
 Identities = 70/133 (52%), Positives = 87/133 (65%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVGK F IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct:   728 RNCLVGKNFTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTSSDVWAF 787

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
             GVTLWE+L   + +PY  L+D +V+EN      D    IYLP P    D +  LM  CW 
Sbjct:   788 GVTLWEMLTFCKEQPYSQLSDEQVIENTGEFFRDQRRQIYLPQPPMCPDPVYKLMLSCWH 847

Query:   160 RSPTERPSFTEIH 172
             R+  ERPSF EIH
Sbjct:   848 RNTKERPSFQEIH 860

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|F1PGJ7 DDR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 387 (141.3 bits), Expect = 8.6e-35, P = 8.6e-35
 Identities = 70/144 (48%), Positives = 93/144 (64%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct:   778 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 837

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK-DILDLMNECWK 159
             GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P +    + +LM  CW 
Sbjct:   838 GVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPSCPLGLYELMLRCWS 897

Query:   160 RSPTERPSFTEIHLFLQRKNLGYV 183
             R P +RPSF+++H FL    L  V
Sbjct:   898 REPEQRPSFSQLHRFLAEDALNTV 921

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|J9P5N9 DDR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 387 (141.3 bits), Expect = 9.1e-35, P = 9.1e-35
 Identities = 70/144 (48%), Positives = 93/144 (64%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct:   804 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 863

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK-DILDLMNECWK 159
             GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P +    + +LM  CW 
Sbjct:   864 GVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPSCPLGLYELMLRCWS 923

Query:   160 RSPTERPSFTEIHLFLQRKNLGYV 183
             R P +RPSF+++H FL    L  V
Sbjct:   924 REPEQRPSFSQLHRFLAEDALNTV 947

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|J3KQG8 DDR1 "Epithelial discoidin domain-containing receptor 1" [Homo sapiens (taxid:9606)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 68/144 (47%), Positives = 91/144 (63%)

Query:    41 KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
             +NCLVG+ F IKI+DF    ++++ DYYRV     LPIRWMAWE + + KFTT SDVW+F
Sbjct:   235 RNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAF 294

Query:   101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
             GVTLWE+L L R +P+  LTD +V+EN      D G  +YL  P    + + +LM  CW 
Sbjct:   295 GVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWS 354

Query:   160 RSPTERPSFTEIHLFLQRKNLGYV 183
             R   +RP F+++H FL    L  V
Sbjct:   355 RESEQRPPFSQLHRFLAEDALNTV 378

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	188
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-74
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-53
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-49
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-48
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-48
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	5e-48
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-48
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-48
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-42
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-41
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	7e-40
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-37
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-36
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-35
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	8e-34
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-33
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-33
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	7e-33
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-32
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	7e-32
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-31
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-30
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-30
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-29
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	9e-29
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-28
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	2e-28
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	4e-28
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-28
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-27
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-27
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-27
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-27
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-27
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	8e-27
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-26
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-26
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-26
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-25
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-25
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-25
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	6e-25
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-24
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	9e-24
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-23
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-23
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-23
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-23
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	4e-23
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-22
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-22
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-22
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-22
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-22
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-22
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-22
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	9e-22
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-21
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-21
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-21
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	4e-21
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	5e-21
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	5e-21
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	6e-21
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-20
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-20
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-20
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-20
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-20
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-20
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-20
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-20
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-19
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-19
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-19
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-19
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-19
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-18
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	8e-18
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	6e-17
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	8e-17
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	9e-17
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-15
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-14
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-14
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	9e-14
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	7e-09
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	9e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-08
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	4e-08
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	6e-08
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	9e-07
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	6e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-05
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	3e-05
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	3e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-05
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	4e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	6e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	7e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	9e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.001
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.001
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.001
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	0.001
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.001
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.002
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.002
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.002
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.003
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.003
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.004

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  224 bits (572), Expect = 5e-74
 Identities = 88/138 (63%), Positives = 102/138 (73%), Gaps = 1/138 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKI+DF    +++SSDYYRV     LPIRWMAWESV L KFTTKSDVW+F
Sbjct: 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAF 218

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP-TPQTTKDILDLMNECWK 159
           GVTLWEIL L R +PYE LTD +V+EN  H   DDG  IYLP  P   KDI +LM ECW+
Sbjct: 219 GVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWR 278

Query: 160 RSPTERPSFTEIHLFLQR 177
           R   +RP+F EIHLFLQR
Sbjct: 279 RDEEDRPTFREIHLFLQR 296

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score =  170 bits (433), Expect = 4e-53
 Identities = 73/137 (53%), Positives = 91/137 (66%), Gaps = 1/137 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVGK + IKI+DF    +++S DYYR+     LPIRWM+WES+ L KFTT SDVW+F
Sbjct: 159 RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAF 218

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GVTLWEIL L + +PY  L+D +V+EN      D G  +YLP P    D L  LM  CW+
Sbjct: 219 GVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWR 278

Query: 160 RSPTERPSFTEIHLFLQ 176
           R+  ERPSF EIH  L 
Sbjct: 279 RNAKERPSFQEIHATLL 295

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  158 bits (403), Expect = 9e-49
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 9/136 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLV +   +KISDF    D++  DYYR      LPI+WMA ES++  KFT+KSDVWSF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWK 159
           GV LWEI  L   +PY G+++ EVLE +     +DG    LP P+    ++ +LM +CW 
Sbjct: 191 GVLLWEIFTLGE-QPYPGMSNEEVLELL-----EDGY--RLPRPENCPDELYELMLQCWA 242

Query: 160 RSPTERPSFTEIHLFL 175
             P +RP+F+E+   L
Sbjct: 243 YDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score =  159 bits (403), Expect = 1e-48
 Identities = 67/136 (49%), Positives = 87/136 (63%), Gaps = 1/136 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG  + IKI+DF    +++S DYYR+     LPIRWMAWES+ L KFTT SDVW+F
Sbjct: 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAF 217

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP-TPQTTKDILDLMNECWK 159
           GVTLWE+  L + +PY  L+D +V+EN      + G  IYL  TP     +  LM  CW 
Sbjct: 218 GVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWS 277

Query: 160 RSPTERPSFTEIHLFL 175
           R   +RP+F +IH FL
Sbjct: 278 RDIKDRPTFNKIHHFL 293

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  157 bits (400), Expect = 2e-48
 Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 8/134 (5%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +KISDF    D++  DYYR      LPIRWMA ES++  KFT+KSDVWSFG
Sbjct: 132 NCLVGENLVVKISDFGLSRDLYDDDYYRK-RGGKLPIRWMAPESLKEGKFTSKSDVWSFG 190

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           V LWEI  L   +PY G+++ EVLE +      +G  +  P P    ++ DLM +CW   
Sbjct: 191 VLLWEIFTLGE-QPYPGMSNEEVLEYL-----KNGYRLPQP-PNCPPELYDLMLQCWAED 243

Query: 162 PTERPSFTEIHLFL 175
           P +RP+F+E+   L
Sbjct: 244 PEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score =  158 bits (400), Expect = 5e-48
 Identities = 68/136 (50%), Positives = 90/136 (66%), Gaps = 1/136 (0%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   IKI+DF    ++++ DYYR+     LPIRWMAWE + + KFTT SDVW+F
Sbjct: 167 RNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAF 226

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GVTLWEIL L + +PY  LTD +V+EN      D G  +YL  P    + + +LM +CW 
Sbjct: 227 GVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWS 286

Query: 160 RSPTERPSFTEIHLFL 175
           R   ERPSF++IH FL
Sbjct: 287 RDCRERPSFSDIHAFL 302

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  156 bits (396), Expect = 8e-48
 Identities = 61/134 (45%), Positives = 81/134 (60%), Gaps = 8/134 (5%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +KISDF    D++  DYY+V     LPIRWMA ES++  KFT+KSDVWSFG
Sbjct: 133 NCLVGENLVVKISDFGLSRDLYDDDYYKV-KGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           V LWEI  L    PY G+++ EVLE +       G  +  P P    ++  LM +CW   
Sbjct: 192 VLLWEIFTLGE-EPYPGMSNAEVLEYL-----KKGYRLPKP-PNCPPELYKLMLQCWAED 244

Query: 162 PTERPSFTEIHLFL 175
           P +RP+F+E+   L
Sbjct: 245 PEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  156 bits (396), Expect = 9e-48
 Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 9/136 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +KISDF    D++  DYYR      LPIRWMA ES++   FT+KSDVWSFG
Sbjct: 135 NCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFG 194

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWKR 160
           V LWEI  L    PY GL++ EVLE +       G    LP P+    ++ +LM  CW+ 
Sbjct: 195 VLLWEIFTLGAT-PYPGLSNEEVLEYLR-----KGYR--LPKPEYCPDELYELMLSCWQL 246

Query: 161 SPTERPSFTEIHLFLQ 176
            P +RP+F+E+   L+
Sbjct: 247 DPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  142 bits (361), Expect = 2e-42
 Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 9/137 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG    +KI DF    D++++DYYRV  +T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 151 RNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 210

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWK 159
           GV LWEI    + +P+ GL++ EV+E I+       +   L  P+T   ++ D+M  CWK
Sbjct: 211 GVVLWEIFTYGK-QPWYGLSNEEVIECIT-------QGRLLQRPRTCPSEVYDIMLGCWK 262

Query: 160 RSPTERPSFTEIHLFLQ 176
           R P +R +  +IH  LQ
Sbjct: 263 RDPQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  140 bits (356), Expect = 1e-41
 Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 9/138 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V +   +KI DF    D++ +DYYR      LP+RWMA ES++   FTTKSDVWSF
Sbjct: 148 RNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSF 207

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWE+  LA  +PY+GL++ EVL+ +      DG   +L  P+   D L +LM  CW+
Sbjct: 208 GVVLWEMATLAE-QPYQGLSNEEVLKFVI-----DGG--HLDLPENCPDKLLELMRMCWQ 259

Query: 160 RSPTERPSFTEIHLFLQR 177
            +P  RP+F EI   L+ 
Sbjct: 260 YNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score =  136 bits (344), Expect = 7e-40
 Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 11/139 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI+DF    +++S+DYY+  +N ++PIRWM  ES+   ++TT+SDVW++
Sbjct: 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAY 218

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP--TPQTTKDILDLMNECW 158
           GV LWEI +    +PY G+   EV+      +  DG  +  P   P    ++ +LM  CW
Sbjct: 219 GVVLWEIFSYGM-QPYYGMAHEEVIY-----YVRDGNVLSCPDNCPL---ELYNLMRLCW 269

Query: 159 KRSPTERPSFTEIHLFLQR 177
            + P++RPSF  I+  LQR
Sbjct: 270 SKLPSDRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  129 bits (326), Expect = 4e-37
 Identities = 59/133 (44%), Positives = 79/133 (59%), Gaps = 9/133 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KISDF    D++S+DYYRV   + LP+RWM  E++   KFTT+SD+WSF
Sbjct: 153 RNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF 212

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GV LWEI +    +PY G ++ EV+E I            LP P+     +  LM ECW 
Sbjct: 213 GVVLWEIFSYGL-QPYYGFSNQEVIEMIR-------SRQLLPCPEDCPARVYALMIECWN 264

Query: 160 RSPTERPSFTEIH 172
             P  RP F +IH
Sbjct: 265 EIPARRPRFKDIH 277

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  128 bits (322), Expect = 1e-36
 Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 9/138 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKFTT+SD+WSF
Sbjct: 151 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSF 210

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GV LWEI    + +P+  L++ E +E I+           L  P+T   ++  +M  CW+
Sbjct: 211 GVVLWEIFTYGK-QPWYQLSNTEAIECITQGRE-------LERPRTCPPEVYAIMQGCWQ 262

Query: 160 RSPTERPSFTEIHLFLQR 177
           R P +R    +IH  LQ 
Sbjct: 263 REPQQRMVIKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  124 bits (314), Expect = 1e-35
 Identities = 62/141 (43%), Positives = 78/141 (55%), Gaps = 12/141 (8%)

Query: 41  KNCLVGKKFE-----IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKS 95
           +NCLV +K       +KI DF    D++ SDYYR      LP+RWMA ES+   KFTT+S
Sbjct: 135 RNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQS 194

Query: 96  DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN 155
           DVWSFGV +WEIL L   +PY  L + EVL+     H   G  +  P       I  LM 
Sbjct: 195 DVWSFGVLMWEILTLG-QQPYPALNNQEVLQ-----HVTAGGRLQKP-ENCPDKIYQLMT 247

Query: 156 ECWKRSPTERPSFTEIHLFLQ 176
            CW + P+ERP+F  I   LQ
Sbjct: 248 NCWAQDPSERPTFDRIQEILQ 268

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score =  120 bits (303), Expect = 8e-34
 Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 11/147 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV  +T LPIRWM  ES+  RKFTT+SDVWS 
Sbjct: 149 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 208

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GV LWEI    + +P+  L++ EV+E I+           L  P+T  K++ DLM  CW+
Sbjct: 209 GVVLWEIFTYGK-QPWYQLSNNEVIECITQGRV-------LQRPRTCPKEVYDLMLGCWQ 260

Query: 160 RSPTERPSFTEIHLFLQRKNLGYVPPM 186
           R P  R +  EIH  LQ  NL    P+
Sbjct: 261 REPHMRLNIKEIHSLLQ--NLAKASPV 285

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  120 bits (302), Expect = 1e-33
 Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 7/135 (5%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG    +KI DF    D++S+DYYRV  +T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 152 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ EV+E I+      G  +  P     K++ D+M  CW+R
Sbjct: 212 GVILWEIFTYGK-QPWFQLSNTEVIECITQ-----GRVLERPR-VCPKEVYDIMLGCWQR 264

Query: 161 SPTERPSFTEIHLFL 175
            P +R +  EI+  L
Sbjct: 265 EPQQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score =  118 bits (298), Expect = 4e-33
 Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 9/137 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G++  +KISD     +++S+DYYRV   + LPIRWM  E++   KF++ SD+WSF
Sbjct: 153 RNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF 212

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           GV LWEI +    +PY G ++ EV+E +            LP  +     +  LM ECW+
Sbjct: 213 GVVLWEIFSFGL-QPYYGFSNQEVIEMVRKRQ-------LLPCSEDCPPRMYSLMTECWQ 264

Query: 160 RSPTERPSFTEIHLFLQ 176
             P+ RP F +IH  L+
Sbjct: 265 EGPSRRPRFKDIHTRLR 281

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score =  117 bits (296), Expect = 7e-33
 Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 9/132 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLV  + E+K+S  +   D+++S+YY+   N  +P+RW+A E+V+   F+TKSDVWSF
Sbjct: 146 RNCLVSSQREVKVSLLSLSKDVYNSEYYK-LRNALIPLRWLAPEAVQEDDFSTKSDVWSF 204

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV +WE+       P+ GL+D EVL     L A   E   LP P+     L  LM  CW 
Sbjct: 205 GVLMWEVFTQGE-LPFYGLSDEEVLNR---LQAGKLE---LPVPEGCPSRLYKLMTRCWA 257

Query: 160 RSPTERPSFTEI 171
            +P +RPSF+E+
Sbjct: 258 VNPKDRPSFSEL 269

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  117 bits (295), Expect = 2e-32
 Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 8/148 (5%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           KKCI +    +N LV +   +KI+DF    D+   DYYR   N  LP++WMA E++  R 
Sbjct: 151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV 210

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWSFGV LWEI  L    PY G+   E+ + +   +  +           T+++
Sbjct: 211 YTHQSDVWSFGVLLWEIFTLG-GSPYPGIPVEELFKLLKEGYRME------KPQNCTQEL 263

Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             LM +CW   P++RP+F ++   L R 
Sbjct: 264 YHLMRDCWHEVPSQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score =  115 bits (289), Expect = 7e-32
 Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 9/132 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 148 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 207

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+G+++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 208 GVVLWEIATLA-EQPYQGMSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 259

Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 260 YNPKMRPSFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score =  115 bits (289), Expect = 1e-31
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D++ +DYYR      LP+RWMA
Sbjct: 130 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 189

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 190 PESLKDGVFTTSSDMWSFGVVLWEITSLAE-QPYQGLSNEQVLKFV----MDGG---YLD 241

Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 242 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 271

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score =  110 bits (278), Expect = 3e-30
 Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 9/137 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+    ++KI DF     +  + D+Y + ++  +P  W A ES+R R F+  SDVW 
Sbjct: 126 RNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWM 185

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
           FGVTLWE+       P+ GL+  ++L+ I      D E   L  P+   +DI ++M +CW
Sbjct: 186 FGVTLWEMFTYGE-EPWAGLSGSQILKKI------DKEGERLERPEACPQDIYNVMLQCW 238

Query: 159 KRSPTERPSFTEIHLFL 175
             +P +RP+F  +  FL
Sbjct: 239 AHNPADRPTFAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  110 bits (276), Expect = 5e-30
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  + + KISDF     +   SDYYR       P++W A E +   KF++KSDVWS
Sbjct: 124 RNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWS 183

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECW 158
           +GVTLWE  +    +PY  +   EV+  +            LP P+     I  +M  CW
Sbjct: 184 YGVTLWEAFSYGA-KPYGEMKGAEVIAMLESGER-------LPRPEECPQEIYSIMLSCW 235

Query: 159 KRSPTERPSFTEIHLFLQR 177
           K  P +RP+F+E+    +R
Sbjct: 236 KYRPEDRPTFSELESTFRR 254

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  108 bits (273), Expect = 2e-29
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 10/137 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LVG+    KI+DF   + +   D Y   +    PI+W A E+    +FT KSDVWSF
Sbjct: 132 RNILVGENLVCKIADFGL-ARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSF 190

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           G+ L EI+   R  PY G+T+ EVLE +   +        +P P    + L DLM +CW 
Sbjct: 191 GILLTEIVTYGR-VPYPGMTNREVLEQVERGY-------RMPRPPNCPEELYDLMLQCWD 242

Query: 160 RSPTERPSFTEIHLFLQ 176
           + P ERP+F  +  FL+
Sbjct: 243 KDPEERPTFEYLQSFLE 259

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score =  107 bits (268), Expect = 9e-29
 Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 17/179 (9%)

Query: 2   GMLRH--RPQASNLAVVPL----LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISD 55
           G LR+  R +  N  V  L    L+   G+E+ + KK   +    +NC++ + F +K++D
Sbjct: 82  GDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVAD 141

Query: 56  FATDSDMFSSDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARH 113
           F    D++  +YY VH++T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++     
Sbjct: 142 FGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA- 200

Query: 114 RPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
            PY  +   ++   +       G    L  P+   D L ++M  CW   P  RP+F+E+
Sbjct: 201 PPYPDVDSFDITVYLL-----QGR--RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSEL 252

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  106 bits (267), Expect = 1e-28
 Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 10/129 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LVG+    K++DF   + +   D Y   +    PI+W A E+    +F+ KSDVWSF
Sbjct: 132 RNVLVGENNICKVADFGL-ARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSF 190

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           G+ L EI+   R  PY G+T+ EVL+ +   +        +P P      L D+M +CWK
Sbjct: 191 GILLTEIVTYGR-MPYPGMTNAEVLQQVDQGYR-------MPCPPGCPKELYDIMLDCWK 242

Query: 160 RSPTERPSF 168
             P +RP+F
Sbjct: 243 EDPDDRPTF 251

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score =  106 bits (267), Expect = 2e-28
 Identities = 50/137 (36%), Positives = 82/137 (59%), Gaps = 9/137 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC++ ++ ++KI+D A   D+F  DY+ + DN + P++WMA ES+  +++++ SDVWSF
Sbjct: 146 RNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSF 205

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWE++ L +  PY    +++  E  ++L   DG    L  P    D L  +M  CW 
Sbjct: 206 GVLLWELMTLGQ-TPYV---EIDPFEMAAYLK--DG--YRLAQPINCPDELFAVMACCWA 257

Query: 160 RSPTERPSFTEIHLFLQ 176
             P ERPSF+++   L 
Sbjct: 258 LDPEERPSFSQLVQCLT 274

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score =  105 bits (264), Expect = 4e-28
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 16/137 (11%)

Query: 41  KNCLV---GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           +NCL+   G     KI+DF    D++ + YYR      LPI+WM  E+     FT+K+DV
Sbjct: 145 RNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDV 204

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENIS---HLHADDGEFIYLPTPQTTKDILDLM 154
           WSFGV LWEI +L    PY G T+ EV+E ++    L    G     P P     +  +M
Sbjct: 205 WSFGVLLWEIFSLGY-MPYPGRTNQEVMEFVTGGGRLDPPKG----CPGP-----VYRIM 254

Query: 155 NECWKRSPTERPSFTEI 171
            +CW+ +P +RP+F  I
Sbjct: 255 TDCWQHTPEDRPNFATI 271

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  104 bits (262), Expect = 7e-28
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K+SDF   +     D Y     T  P++W   E     +F++KSDVWSF
Sbjct: 129 RNCLVGEDNVVKVSDFGL-ARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSF 187

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WE+ +  +  PYE  ++ EV+E++S      G  +Y P      ++  +M  CW  
Sbjct: 188 GVLMWEVFSEGK-MPYERFSNSEVVESVSA-----GYRLYRPK-LAPTEVYTIMYSCWHE 240

Query: 161 SPTERPSFTEI 171
            P +RP+F ++
Sbjct: 241 KPEDRPAFKKL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score =  103 bits (259), Expect = 2e-27
 Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 9/150 (6%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E  S      K    +N LV  K  +KISD     +++++DYY++  N+ LPIRWM+ 
Sbjct: 136 GMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSP 195

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++   KF+  SD+WS+GV LWE+ +    +PY G ++ +V+E I +          LP 
Sbjct: 196 EAIMYGKFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVIEMIRNRQV-------LPC 247

Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIH 172
           P      +  LM ECW   P+ RP F +IH
Sbjct: 248 PDDCPAWVYTLMLECWNEFPSRRPRFKDIH 277

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score =  103 bits (259), Expect = 2e-27
 Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 26/171 (15%)

Query: 18  LLRNKNGVEHSSLKKKCIKIFD----------------FKNCLVGKKFEIKISDFATDSD 61
           L  NK  ++ +SL     ++                   +N LV     +K+ DF     
Sbjct: 97  LQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156

Query: 62  MFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
           +    YY+      LPI+WMA ES+  R+FT+ SDVW FGV +WEIL L   +P++G+ +
Sbjct: 157 LEDESYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV-KPFQGVKN 214

Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
            +V   I  +  ++GE   LP P      L  LM +CW   P++RP FTE+
Sbjct: 215 NDV---IGRI--ENGE--RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score =  103 bits (258), Expect = 3e-27
 Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 9/138 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC++ +   + ++DF     ++S DYYR      +P++W+A ES+  R +T+KSDVW+F
Sbjct: 142 RNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 201

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           GVT+WEI    +  PY G+ + E+ + + H +        L  P+   D + DLM  CW+
Sbjct: 202 GVTMWEIATRGQ-TPYPGVENHEIYDYLRHGNR-------LKQPEDCLDELYDLMYSCWR 253

Query: 160 RSPTERPSFTEIHLFLQR 177
             P +RP+FT++   L+ 
Sbjct: 254 ADPKDRPTFTKLREVLEN 271

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score =  102 bits (256), Expect = 6e-27
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 9/157 (5%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ S K    +    +NC++ +   + ++DF     ++S DYYR    + LP++W+A 
Sbjct: 125 GMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLAL 184

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+    +TT SDVW+FGVT+WEI+   +  PY G+ + E+       +   G  +  P 
Sbjct: 185 ESLADNVYTTHSDVWAFGVTMWEIMTRGQ-TPYAGVENSEIYN-----YLIKGNRLKQP- 237

Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL 180
           P   +D+ +LM +CW   P  RPSF   HL  Q + +
Sbjct: 238 PDCLEDVYELMCQCWSPEPKCRPSFQ--HLRDQLELI 272

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  102 bits (256), Expect = 7e-27
 Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 11/133 (8%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVH-DNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N LV     +KI+DF   + +   D    H +   +PI+WMA ES+  R +T KSDVWS
Sbjct: 138 RNVLVKTPQHVKITDFGL-AKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWS 196

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECW 158
           +GVT+WE++     +PYEG+  +E+ +       + GE   LP P   T D+  ++ +CW
Sbjct: 197 YGVTVWELMTFGA-KPYEGIPAVEIPD-----LLEKGE--RLPQPPICTIDVYMVLVKCW 248

Query: 159 KRSPTERPSFTEI 171
                 RP+F E+
Sbjct: 249 MIDAESRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score =  102 bits (255), Expect = 8e-27
 Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 7/155 (4%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+E+ S K    +    +NC++ +   + ++DF     +++ DYYR      +P++W+A
Sbjct: 123 SGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIA 182

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES+  R +TTKSDVWSFGVT+WEI    +  PY G+ + E+ + +       G  +  P
Sbjct: 183 IESLADRVYTTKSDVWSFGVTMWEIATRGQ-TPYPGVENSEIYDYLRQ-----GNRLKQP 236

Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
            P     +  LM+ CW  +P +RPSF  +   L++
Sbjct: 237 -PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  101 bits (253), Expect = 1e-26
 Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 8/132 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 133 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 191

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI       PY G+     L  +  L  + G  +  P       + +LM  CW+ 
Sbjct: 192 GVLLWEIATYGM-SPYPGID----LSQVYEL-LEKGYRMERP-EGCPPKVYELMRACWQW 244

Query: 161 SPTERPSFTEIH 172
           +P++RPSF EIH
Sbjct: 245 NPSDRPSFAEIH 256

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score =  101 bits (252), Expect = 2e-26
 Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 16/178 (8%)

Query: 5   RHRPQASNLAVVPLLR----NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS 60
                AS L+   LL        G+++ S K+   +    +N LVG+ +  KI+DF    
Sbjct: 101 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160

Query: 61  DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT 120
                + Y       LP+RWMA ES+    +TT SDVWS+GV LWEI++L    PY G+T
Sbjct: 161 ---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMT 216

Query: 121 DLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
             E+ E +   +        L  P    D + DLM +CW+  P ERPSF +I + L R
Sbjct: 217 CAELYEKLPQGYR-------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  100 bits (251), Expect = 3e-26
 Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 11/139 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV      K+SDF     +  S+         +PIRW A E++  RKFT+ SDVWSF
Sbjct: 135 RNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSF 194

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-LPTPQTTKDIL-DLMNECW 158
           G+ +WE+++    RPY  +++ +V++ +     +DG   Y LP P      L  LM +CW
Sbjct: 195 GIVMWEVMSYGE-RPYWDMSNQDVIKAV-----EDG---YRLPPPMDCPSALYQLMLDCW 245

Query: 159 KRSPTERPSFTEIHLFLQR 177
           ++   ERP+F++I   L +
Sbjct: 246 QKDRNERPTFSQIVSTLDK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 97.9 bits (244), Expect = 2e-25
 Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 11/138 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT-SLPIRWMAWESVRLRKFTTKSDVWS 99
           +NCLVG+   +KISDF   S       Y V D    +PI+W A E++   ++T++SDVWS
Sbjct: 122 RNCLVGENNVLKISDFGM-SREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWS 180

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
           +G+ LWE  +L    PY G+++ +  E I     + G    +P PQ   ++I  LM +CW
Sbjct: 181 YGILLWETFSLG-DTPYPGMSNQQTRERI-----ESG--YRMPAPQLCPEEIYRLMLQCW 232

Query: 159 KRSPTERPSFTEIHLFLQ 176
              P  RPSF+EI+  LQ
Sbjct: 233 AYDPENRPSFSEIYNELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 98.9 bits (246), Expect = 2e-25
 Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 16/178 (8%)

Query: 5   RHRPQASNLAVVPLLR----NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS 60
           +    AS L    LL+       G+++ S K+   +    +N LVG+    KI+DF    
Sbjct: 108 KEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR 167

Query: 61  DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT 120
                + Y       LP+RWMA ES+    +TTKSDVWSFGV LWEI++L    PY G+T
Sbjct: 168 ---GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLG-GTPYCGMT 223

Query: 121 DLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
             E+ E +        +   +  P+   D + +LM +CW+  P ERP F +I + L R
Sbjct: 224 CAELYEKLP-------QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSR 274

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 98.2 bits (245), Expect = 3e-25
 Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 10/146 (6%)

Query: 41  KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N LV  +  +KISDF          DYY V +    PI W A E +R  KF++ SDVWS
Sbjct: 138 RNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWS 197

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL--------PTPQTTKDIL 151
           FGVTL+E+             +   +  I+         + L          P    ++ 
Sbjct: 198 FGVTLYELFTYGDPS-QSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVY 256

Query: 152 DLMNECWKRSPTERPSFTEIHLFLQR 177
           DLM  CW+  P +RPSF ++ L + R
Sbjct: 257 DLMKLCWEAEPQDRPSFADLILIVDR 282

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 96.9 bits (241), Expect = 6e-25
 Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 8/129 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K+SDF   +     D Y     T  P++W + E     K+++KSDVWSF
Sbjct: 129 RNCLVGENQVVKVSDFGM-TRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSF 187

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WE+ +  +  PYE  ++ EV+E I+      G  +Y P    ++ + +LM  CWK 
Sbjct: 188 GVLMWEVFSEGK-TPYENRSNSEVVETIN-----AGFRLYKPR-LASQSVYELMQHCWKE 240

Query: 161 SPTERPSFT 169
            P +RPSF+
Sbjct: 241 RPEDRPSFS 249

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 96.6 bits (240), Expect = 2e-24
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++ S K+   +    +N LVG+ +  KI+DF         + Y       LP+RWMA 
Sbjct: 136 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 192

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+    +TT SDVWS+GV LWEI++L    PY G+T  E+ E +        +   L  
Sbjct: 193 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLP-------QGYRLEK 244

Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
           P    D + DLM +CW+  P ERPSF +I + L R
Sbjct: 245 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 95.3 bits (237), Expect = 9e-24
 Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 11/143 (7%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLR 89
           +KCI +    +N L+ +   +KI DF    D++   DY R  D   LP++WMA ES+  +
Sbjct: 192 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPESIFDK 250

Query: 90  KFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTK 148
            +TT+SDVWSFGV LWEI +L    PY G+  D E    +       G  +  P    T 
Sbjct: 251 VYTTQSDVWSFGVLLWEIFSLGA-SPYPGVQIDEEFCRRLKE-----GTRMRAPE-YATP 303

Query: 149 DILDLMNECWKRSPTERPSFTEI 171
           +I  +M +CW  +P +RP+F+E+
Sbjct: 304 EIYSIMLDCWHNNPEDRPTFSEL 326

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 93.1 bits (231), Expect = 2e-23
 Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 12/155 (7%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+   KK   +    +N LV +    K+SDF       +       DN+ LP++W A 
Sbjct: 112 GMEYLESKKLVHRDLAARNILVSEDGVAKVSDFG-----LARVGSMGVDNSKLPVKWTAP 166

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E+++ +KF++KSDVWS+GV LWE+ +  R  PY  ++  EV E +   +  +      P 
Sbjct: 167 EALKHKKFSSKSDVWSYGVLLWEVFSYGR-APYPKMSLKEVKECVEKGYRME------PP 219

Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRK 178
                D+  LM  CW+  P +RPSF ++   L+++
Sbjct: 220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLEKE 254

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 92.8 bits (230), Expect = 2e-23
 Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 10/136 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG     KI+DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 132 NILVGDNLVCKIADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L E++   R  PY G+ + EVLE +   +        +P PQ   + L +LM  CWK+
Sbjct: 191 ILLTELVTKGR-VPYPGMVNREVLEQVERGYR-------MPCPQGCPESLHELMKLCWKK 242

Query: 161 SPTERPSFTEIHLFLQ 176
            P ERP+F  I  FL+
Sbjct: 243 DPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 93.9 bits (233), Expect = 2e-23
 Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 8/141 (5%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           ++CI +    +N LV +   +KI+DF     +   DYY+   N  LP++WMA E++  R 
Sbjct: 153 RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRV 212

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWSFG+ +WEI  L    PY G+   E+ + +   H  D           T ++
Sbjct: 213 YTHQSDVWSFGILMWEIFTLG-GSPYPGIPVEELFKLLREGHRMD------KPSNCTHEL 265

Query: 151 LDLMNECWKRSPTERPSFTEI 171
             LM ECW   PT+RP+F ++
Sbjct: 266 YMLMRECWHAVPTQRPTFKQL 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 93.9 bits (233), Expect = 3e-23
 Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 8/141 (5%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA E++  R 
Sbjct: 153 QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV 212

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D           T ++
Sbjct: 213 YTHQSDVWSFGVLLWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KPANCTHEL 265

Query: 151 LDLMNECWKRSPTERPSFTEI 171
             +M ECW   P++RP+F ++
Sbjct: 266 YMIMRECWHAVPSQRPTFKQL 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 93.2 bits (231), Expect = 4e-23
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 8/141 (5%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           KKCI +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA E++  R 
Sbjct: 159 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 218

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D      P+   T ++
Sbjct: 219 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS-NCTNEL 271

Query: 151 LDLMNECWKRSPTERPSFTEI 171
             +M +CW   P++RP+F ++
Sbjct: 272 YMMMRDCWHAVPSQRPTFKQL 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 90.4 bits (224), Expect = 2e-22
 Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 10/136 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG     KI+DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 132 NILVGDGLVCKIADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L E++   R  PY G+ + EVLE +   +        +P PQ     L +LM +CWK+
Sbjct: 191 ILLTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMLQCWKK 242

Query: 161 SPTERPSFTEIHLFLQ 176
            P ERP+F  +  FL+
Sbjct: 243 DPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 90.3 bits (224), Expect = 2e-22
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLV  +  +K+SDF   S     D Y     +  P+RW   E +   KF++KSDVW+F
Sbjct: 129 RNCLVDDQGCVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAF 187

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WE+ +L +  PYE   + E +E +S      G  +Y P    ++ +  +M  CW  
Sbjct: 188 GVLMWEVYSLGK-MPYERFNNSETVEKVSQ-----GLRLYRPH-LASEKVYAIMYSCWHE 240

Query: 161 SPTERPSFTEI 171
              ERP+F ++
Sbjct: 241 KAEERPTFQQL 251

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 90.6 bits (225), Expect = 3e-22
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 6/136 (4%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+     +KI DF    D+ +   Y V  N  LP++WMA ES+    +T +SDVWS+
Sbjct: 170 RNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 229

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +L  + PY G+     +++  +    +G  +  P      +I D+M  CW  
Sbjct: 230 GILLWEIFSLGSN-PYPGM----PVDSKFYKLIKEGYRMAQPE-HAPAEIYDIMKTCWDA 283

Query: 161 SPTERPSFTEIHLFLQ 176
            P +RP+F +I   + 
Sbjct: 284 DPLKRPTFKQIVQLIG 299

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 89.7 bits (222), Expect = 4e-22
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +NCLV +K  +KISDF    +     Y        +P++W A E++   +
Sbjct: 113 KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGR 172

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP-QTTKD 149
           ++++SDVWSFG+ LWE  +L    PY  L++ +  E I        + + LP P      
Sbjct: 173 YSSESDVWSFGILLWEAFSLGA-VPYANLSNQQTREAIE-------QGVRLPCPELCPDA 224

Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQ 176
           +  LM  CW+  P +RPSF+ +H  LQ
Sbjct: 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 89.4 bits (222), Expect = 4e-22
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 18/140 (12%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +    K+SDF    +          D+  LP++W A E++R +KF+TKSDVWSF
Sbjct: 131 RNVLVSEDLVAKVSDFGLAKEASQG-----QDSGKLPVKWTAPEALREKKFSTKSDVWSF 185

Query: 101 GVTLWEILNLARHRPY--EGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
           G+ LWEI +  R  PY    L D+   +E    + A +G            ++  +M +C
Sbjct: 186 GILLWEIYSFGR-VPYPRIPLKDVVPHVEKGYRMEAPEG---------CPPEVYKVMKDC 235

Query: 158 WKRSPTERPSFTEIHLFLQR 177
           W+  P +RP+F ++   L  
Sbjct: 236 WELDPAKRPTFKQLREQLAL 255

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 90.1 bits (223), Expect = 6e-22
 Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 8/141 (5%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA E++  R 
Sbjct: 156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV 215

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D           T ++
Sbjct: 216 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KPANCTNEL 268

Query: 151 LDLMNECWKRSPTERPSFTEI 171
             +M +CW   P+ RP+F ++
Sbjct: 269 YMMMRDCWHAIPSHRPTFKQL 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 89.0 bits (221), Expect = 6e-22
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 11/133 (8%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LVG+    K++DF   + +   D Y   D   +P +W A E+     F+TKSDVWSF
Sbjct: 133 RNILVGEDLVCKVADFGL-ARLIKEDVYLSSD-KKIPYKWTAPEAASHGTFSTKSDVWSF 190

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP-QTTKDILDLMNECWK 159
           G+ L+E+    +  PY G+ + EV + I+           +P P +  ++I  +M ECW 
Sbjct: 191 GILLYEMFTYGQ-VPYPGMNNHEVYDQIT-------AGYRMPCPAKCPQEIYKIMLECWA 242

Query: 160 RSPTERPSFTEIH 172
             P +RPSF  + 
Sbjct: 243 AEPEDRPSFKALR 255

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 89.3 bits (221), Expect = 9e-22
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 7/131 (5%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +  ++KISDF    D++  D Y       +P++WMA ES+    +TT+SDVWSF
Sbjct: 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSF 215

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI+ L  + PY G+      E + +L    G  +  P    ++++ +LM  CWK+
Sbjct: 216 GVLLWEIVTLGGN-PYPGIAP----ERLFNL-LKTGYRMERPE-NCSEEMYNLMLTCWKQ 268

Query: 161 SPTERPSFTEI 171
            P +RP+F +I
Sbjct: 269 EPDKRPTFADI 279

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 88.4 bits (219), Expect = 1e-21
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 10/128 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +    KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 132 NILVSETLCCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 190

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
           + L EI+   R  PY G+T+ EV++N+   +        +P P    +++ +LM  CWK 
Sbjct: 191 ILLTEIVTYGR-IPYPGMTNPEVIQNLERGYR-------MPRPDNCPEELYELMRLCWKE 242

Query: 161 SPTERPSF 168
            P ERP+F
Sbjct: 243 KPEERPTF 250

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 88.9 bits (220), Expect = 1e-21
 Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 11/133 (8%)

Query: 41  KNCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVW 98
           +N LV     +KI+DF  A   D+  ++Y+   D   +PI+WMA ES+  R+FT +SDVW
Sbjct: 138 RNVLVKSPNHVKITDFGLARLLDIDETEYHA--DGGKVPIKWMALESILHRRFTHQSDVW 195

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S+GVT+WE++     +PY+G+   E+ + +     + GE +  P P  T D+  +M +CW
Sbjct: 196 SYGVTVWELMTFGA-KPYDGIPAREIPDLL-----EKGERLPQP-PICTIDVYMIMVKCW 248

Query: 159 KRSPTERPSFTEI 171
                 RP F E+
Sbjct: 249 MIDSECRPRFREL 261

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 87.7 bits (217), Expect = 2e-21
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT--SLPIRWMAWESVRLRKFTTKSDVW 98
           +N LV    E K+SDF   S +   D    +  +   +PIRW A E++  RKFT+ SDVW
Sbjct: 136 RNILVNSNLECKVSDFGL-SRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVW 194

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNEC 157
           SFG+ +WE+++    RPY  +++ EV++ I+       +   LP P      +  LM +C
Sbjct: 195 SFGIVMWEVMSFGE-RPYWDMSNHEVMKAIN-------DGFRLPAPMDCPSAVYQLMLQC 246

Query: 158 WKRSPTERPSFTEI 171
           W++    RP F +I
Sbjct: 247 WQQDRARRPRFVDI 260

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 86.9 bits (215), Expect = 4e-21
 Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 10/138 (7%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD--YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVW 98
           +N L+  +   KISDF   S    +D  YY+   +   P++W A E +   KF++KSDVW
Sbjct: 124 RNVLLVTQHYAKISDFGL-SKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVW 182

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           SFGV +WE  +  + +PY+G+   EV + I     + GE +  P  +   ++ DLM  CW
Sbjct: 183 SFGVLMWEAFSYGQ-KPYKGMKGNEVTQMI-----ESGERMECP-QRCPPEMYDLMKLCW 235

Query: 159 KRSPTERPSFTEIHLFLQ 176
                ERP F  + L L+
Sbjct: 236 TYGVDERPGFAVVELRLR 253

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 88.1 bits (218), Expect = 5e-21
 Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 9/142 (6%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +   +KI DF    D++    Y    +  LP++WMA ES+  + 
Sbjct: 193 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKV 252

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +TT+SDVWSFGV LWEI +L    PY G+  + E  + +      DG  +  P    T +
Sbjct: 253 YTTQSDVWSFGVLLWEIFSLGA-SPYPGVQINEEFCQRLK-----DGTRMRAPE-NATPE 305

Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           I  +M  CW+  P ERP+F+ +
Sbjct: 306 IYRIMLACWQGDPKERPTFSAL 327

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 88.2 bits (218), Expect = 5e-21
 Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 11/143 (7%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLR 89
           +KCI +    +N L+ +   +KI DF    D++   DY R  D   LP++WMA E++  R
Sbjct: 198 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDR 256

Query: 90  KFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTK 148
            +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT 
Sbjct: 257 VYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTP 309

Query: 149 DILDLMNECWKRSPTERPSFTEI 171
           ++   M +CW   P++RP+F+E+
Sbjct: 310 EMYQTMLDCWHGEPSQRPTFSEL 332

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 86.9 bits (215), Expect = 6e-21
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 12/140 (8%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT--SLPIRWMAWESVRLRKFTTKSDVW 98
           +N LV      K+SDF   S +   D    +      +PIRW A E++  RKFT+ SDVW
Sbjct: 135 RNILVNSNLVCKVSDFGL-SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 193

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
           S+G+ +WE+++    RPY  +++ +V++ I        E   LP P      L  LM +C
Sbjct: 194 SYGIVMWEVMSYGE-RPYWEMSNQDVIKAIE-------EGYRLPAPMDCPAALHQLMLDC 245

Query: 158 WKRSPTERPSFTEIHLFLQR 177
           W++   ERP F +I   L +
Sbjct: 246 WQKDRNERPKFEQIVSILDK 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 85.8 bits (212), Expect = 1e-20
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 19/147 (12%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFAT----DSDMFSSDYYRVHDNTSLPIRWMAWESV 86
           K CI +    +NCLVG+   +KISDF      D  ++SS   +      +PI+W A E++
Sbjct: 112 KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK-----QIPIKWTAPEAL 166

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
              +++++SDVWS+G+ LWE  +L    PY G+T+ +  E +   +        +  PQ 
Sbjct: 167 NYGRYSSESDVWSYGILLWETFSLGVC-PYPGMTNQQAREQVEKGYR-------MSCPQK 218

Query: 147 T-KDILDLMNECWKRSPTERPSFTEIH 172
              D+  +M  CW   P  RP F+E+ 
Sbjct: 219 CPDDVYKVMQRCWDYKPENRPKFSELQ 245

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 85.8 bits (212), Expect = 1e-20
 Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 18/139 (12%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +    K+SDF    +  S       D   LP++W A E++R +KF+TKSDVWSF
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSF 185

Query: 101 GVTLWEILNLARHRPYEGLTDLEV---LENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
           G+ LWEI +  R  PY  +   +V   +E    + A DG       P     + D+M +C
Sbjct: 186 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDG------CPPV---VYDVMKQC 235

Query: 158 WKRSPTERPSFTEIHLFLQ 176
           W      RPSF ++   L+
Sbjct: 236 WHLDAATRPSFLQLREQLE 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 87.2 bits (216), Expect = 1e-20
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 6/137 (4%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    +T +SDVWS+
Sbjct: 241 RNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 300

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +L +  PY G+    ++ +  +     G  +  P      +I  +M  CW  
Sbjct: 301 GILLWEIFSLGKS-PYPGI----LVNSKFYKMVKRGYQMSRPD-FAPPEIYSIMKMCWNL 354

Query: 161 SPTERPSFTEIHLFLQR 177
            PTERP+F++I   +QR
Sbjct: 355 EPTERPTFSQISQLIQR 371

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 85.3 bits (211), Expect = 1e-20
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLV     +K+SDF     +   D Y        P++W   E     K+++KSDVWSF
Sbjct: 129 RNCLVSSTGVVKVSDFGMTRYVLD-DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSF 187

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WE+    +  P+E  ++ EV+E IS      G  +Y P    +  + ++M  CW  
Sbjct: 188 GVLMWEVFTEGK-MPFEKKSNYEVVEMISR-----GFRLYRPK-LASMTVYEVMYSCWHE 240

Query: 161 SPTERPSFTEI 171
            P  RP+F E+
Sbjct: 241 KPEGRPTFAEL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 85.5 bits (211), Expect = 2e-20
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 132 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 190

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 191 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 243

Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 244 PEERPTFEYLQAFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 85.3 bits (211), Expect = 2e-20
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 38  FDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR-------K 90
              +NC +     +KI D+    + +  DYY   D  ++P+RW+A E V +R        
Sbjct: 126 LALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKD 185

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
            T KS++WS GVT+WE+   A  +PY  L+D +VL+ +  +   D   I LP PQ     
Sbjct: 186 QTKKSNIWSLGVTMWELFTAAD-QPYPDLSDEQVLKQV--VREQD---IKLPKPQLDLKY 239

Query: 151 LD----LMNECWKRSPTERPSFTEIHLFL 175
            D    +M  CW   P  RP+  E+H  L
Sbjct: 240 SDRWYEVMQFCW-LDPETRPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 84.7 bits (209), Expect = 3e-20
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 10/135 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +    KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 133 NVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 191

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L+EI+   +  PY G+++ +V+  +   +        +P  +   D L D+M  CWK 
Sbjct: 192 ILLYEIVTYGK-IPYPGMSNSDVMSALQRGYR-------MPRMENCPDELYDIMKTCWKE 243

Query: 161 SPTERPSFTEIHLFL 175
              ERP+F  +   L
Sbjct: 244 KAEERPTFDYLQSVL 258

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 84.7 bits (209), Expect = 3e-20
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 132 NILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 190

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+++ EV+  +         +         +++ ++M  CWK  
Sbjct: 191 ILLMEIVTYGR-IPYPGMSNPEVIRALER------GYRMPRPENCPEELYNIMMRCWKNR 243

Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  I   L 
Sbjct: 244 PEERPTFEYIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 83.5 bits (206), Expect = 1e-19
 Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 15/135 (11%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVH-DNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N LV     +KI+DF   + +  +D    H +   +PI+WMA ES+  R +T +SDVWS
Sbjct: 138 RNVLVKTPQHVKITDFGL-AKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 196

Query: 100 FGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           +GVT+WE++     +PY+G+   E   +LE         GE +  P P  T D+  +M +
Sbjct: 197 YGVTVWELMTFGS-KPYDGIPASEISSILEK--------GERLPQP-PICTIDVYMIMVK 246

Query: 157 CWKRSPTERPSFTEI 171
           CW      RP F E+
Sbjct: 247 CWMIDADSRPKFREL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 82.7 bits (204), Expect = 2e-19
 Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 8/132 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + D YY+       P++W A E +  RKF+++SDVWS
Sbjct: 124 RNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWS 183

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           +G+T+WE  +  + +PY+ +   EV+  I     + G+ +  P  +   ++  LM +CW 
Sbjct: 184 YGITMWEAFSYGQ-KPYKKMKGPEVMSFI-----EQGKRLDCP-AECPPEMYALMKDCWI 236

Query: 160 RSPTERPSFTEI 171
               +RP+F ++
Sbjct: 237 YKWEDRPNFAKV 248

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 82.7 bits (204), Expect = 2e-19
 Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+     ++I+DF     ++  D    +     PI+WMA ES+   ++T +SDVWS+
Sbjct: 138 RNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSY 197

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWK 159
           GVT+WE+++     PY G+   EV + +     + GE   L  PQ  T D+  +M +CW 
Sbjct: 198 GVTVWEMMSYGA-EPYAGMRPHEVPDLL-----EKGE--RLAQPQICTIDVYMVMVKCWM 249

Query: 160 RSPTERPSFTEI 171
                RP+F E+
Sbjct: 250 IDENVRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 81.8 bits (202), Expect = 3e-19
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 12/135 (8%)

Query: 41  KNCLVGKKFEIKISDFATD---SDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           +N LV      K+SDF       D  S   Y       +PIRW A E++  RKFT+ SDV
Sbjct: 135 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDV 194

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNE 156
           WS+G+ +WE+++    RPY  +++ +V+  I   +        LP P      L  LM +
Sbjct: 195 WSYGIVMWEVMSYG-ERPYWDMSNQDVINAIEQDYR-------LPPPMDCPTALHQLMLD 246

Query: 157 CWKRSPTERPSFTEI 171
           CW++    RP F +I
Sbjct: 247 CWQKDRNARPKFGQI 261

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 82.4 bits (203), Expect = 4e-19
 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 7/131 (5%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     +   +     D   +PI+WMA E +  RKFT +SDVWS+
Sbjct: 138 RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 197

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+ + +     + GE +  P P  T D+  +M +CW  
Sbjct: 198 GVTIWELMTFG-GKPYDGIPTREIPDLL-----EKGERLPQP-PICTIDVYMVMVKCWMI 250

Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 251 DADSRPKFKEL 261

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 81.2 bits (200), Expect = 2e-18
 Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 6/128 (4%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+ +   +KI DF    D+     Y    +T LP++WMA ES+    +TT SDVWS+
Sbjct: 266 RNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSY 325

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +L    PY G+    ++++  +     G  +  P    T+++ D+M +CW  
Sbjct: 326 GILLWEIFSLG-GTPYPGM----IVDSTFYNKIKSGYRMAKPD-HATQEVYDIMVKCWNS 379

Query: 161 SPTERPSF 168
            P +RPSF
Sbjct: 380 EPEKRPSF 387

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 78.0 bits (192), Expect = 8e-18
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 10/135 (7%)

Query: 44  LVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVT 103
           LV      KIS F    +  S   Y      S P+ W A E+++   F++ SDVWSFG+ 
Sbjct: 139 LVNSDLVCKISGFRRLQEDKSEAIYTTMSGKS-PVLWAAPEAIQYHHFSSASDVWSFGIV 197

Query: 104 LWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSP 162
           +WE+++    RPY  ++  +V++ +     +DG    LP P+   ++L  LM +CW++  
Sbjct: 198 MWEVMSYG-ERPYWDMSGQDVIKAV-----EDG--FRLPAPRNCPNLLHQLMLDCWQKER 249

Query: 163 TERPSFTEIHLFLQR 177
            ERP F++IH  L +
Sbjct: 250 GERPRFSQIHSILSK 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 75.7 bits (186), Expect = 6e-17
 Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 26/166 (15%)

Query: 21  NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
           +KN   HS L          +NCL+     +KI D+    + +  DYY   D   +P+RW
Sbjct: 117 HKNNFIHSDLA--------LRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRW 168

Query: 81  MAWESVR-------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA 133
           +A E V        +   T +S+VWS GVT+WE+  L   +PY  L+D +VL      + 
Sbjct: 169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELG-SQPYRHLSDEQVLT-----YT 222

Query: 134 DDGEFIYLPTPQTTKDILD----LMNECWKRSPTERPSFTEIHLFL 175
              + + LP P+    + D    +M  CW + P +RPS  E+HL L
Sbjct: 223 VREQQLKLPKPRLKLPLSDRWYEVMQFCWLQ-PEQRPSAEEVHLLL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 77.0 bits (189), Expect = 8e-17
 Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           NG+E  + K    +    +N L+ +   +KI DF    D+     Y    +T LP++WMA
Sbjct: 250 NGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMA 309

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES+    +TT SDVWSFG+ LWEI  L    PY  L   E   N        G  +  P
Sbjct: 310 PESIFNNLYTTLSDVWSFGILLWEIFTLG-GTPYPELPMNEQFYNA----IKRGYRMAKP 364

Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
               + +I ++M +CW+     RP F+++   +  
Sbjct: 365 A-HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 76.5 bits (188), Expect = 9e-17
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 11/143 (7%)

Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 233 KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCV 292

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQ-TTK 148
           +T +SDVWS+G+ LWEI +L    PY G+  D +  + I        E   + +P+    
Sbjct: 293 YTFESDVWSYGILLWEIFSLG-SSPYPGMPVDSKFYKMIK-------EGYRMLSPECAPS 344

Query: 149 DILDLMNECWKRSPTERPSFTEI 171
           ++ D+M  CW   P +RP+F +I
Sbjct: 345 EMYDIMKSCWDADPLKRPTFKQI 367

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 75.2 bits (185), Expect = 2e-16
 Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 9/140 (6%)

Query: 41  KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N LV  +  +KI DF  T       +YY+V +    PI W A ES+   KF+  SDVWS
Sbjct: 137 RNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWS 196

Query: 100 FGVTLWEIL---NLARHRPYEGLT----DLEVLENISHLHADDGEFIYLPTPQTTKD-IL 151
           FGV L+E+    + +   P E +     D +    + HL         LP P      I 
Sbjct: 197 FGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIY 256

Query: 152 DLMNECWKRSPTERPSFTEI 171
            +M ECW   P++RPSF+E+
Sbjct: 257 AIMKECWNNDPSQRPSFSEL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 71.5 bits (176), Expect = 2e-15
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 15/141 (10%)

Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYY-RVHDNTSLPIRWMAWESVRLRK-FTTKSDV 97
           N L+ +   +KI+DF  A      SS     V         +MA E +     +  K DV
Sbjct: 128 NILLDENGVVKIADFGLAKKLLKSSSSLTTFVGT-----PWYMAPEVLLGGNGYGPKVDV 182

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISH-LHADDGEFIYLPTPQTTKDILDLMNE 156
           WS GV L+E+L      P+ G   L+ L+ I   L     EF        +++  DL+ +
Sbjct: 183 WSLGVILYELLT--GKPPFSGENILDQLQLIRRILGPPL-EFDEPKWSSGSEEAKDLIKK 239

Query: 157 CWKRSPTERPSFTEI--HLFL 175
           C  + P++RP+  EI  H + 
Sbjct: 240 CLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 69.5 bits (170), Expect = 1e-14
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)

Query: 40  FKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR-------KFT 92
            +NC +     +K+ D+      +  DY    D+  +P+RW+A E V          + T
Sbjct: 127 LRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQT 186

Query: 93  TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD 152
             S+VW+ GVTLWE+   A  +PY  L+D EVL      H    + + L  PQ      +
Sbjct: 187 KPSNVWALGVTLWELFENAA-QPYSHLSDREVLN-----HVIKDQQVKLFKPQLELPYSE 240

Query: 153 LMNE----CWKRSPTERPSFTEIHLFL 175
              E    CW  SP +R +  E+H  L
Sbjct: 241 RWYEVLQFCW-LSPEKRATAEEVHRLL 266

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 68.0 bits (166), Expect = 5e-14
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 12/138 (8%)

Query: 41  KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+     +KI DF    +     +YYRV ++   P+ W A E ++  KF+  SDVWS
Sbjct: 136 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWS 195

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHA--------DDGEFIYLPTPQTT-KDI 150
           FGVTL+E+L     +        E++                + G    LP P+   +++
Sbjct: 196 FGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM--RLPCPKNCPQEV 253

Query: 151 LDLMNECWKRSPTERPSF 168
             LM  CW+     RP+F
Sbjct: 254 YILMKNCWETEAKFRPTF 271

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 67.6 bits (166), Expect = 6e-14
 Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 24/138 (17%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDY----YRVHDNTSLPIRWMAWESVRLRKFTT 93
           N L+ +   +K++DF      D     + +                +MA E +  + +  
Sbjct: 127 NILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPE-----------YMAPEVLLGKGYGK 175

Query: 94  KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDL 153
             D+WS GV L+E+  L    P+ G   L     +             P    + +  DL
Sbjct: 176 AVDIWSLGVILYEL--LTGKPPFPGDDQLLE---LFKKIGKPKPPFPPPEWDISPEAKDL 230

Query: 154 MNECWKRSPTERPSFTEI 171
           + +   + P +R +  E 
Sbjct: 231 IRKLLVKDPEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 67.3 bits (164), Expect = 9e-14
 Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 34/183 (18%)

Query: 18  LLRNKNGVEHSSLKKKCIKI---FDF-------------KNCLVGKKFEIKISDFA-TDS 60
           L RNKN +      K  ++I    D+             +N LV  + ++KI DF  T +
Sbjct: 99  LPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158

Query: 61  DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN----------- 109
                +YY V D+   P+ W A E +   KF   SDVWSFGVTL+E+L            
Sbjct: 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL 218

Query: 110 -LARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
            L    P  G   +  L  +     ++G+ +  P P   +++  LM +CW+  P++R +F
Sbjct: 219 FLKMIGPTHGQMTVTRLVRV----LEEGKRLPRP-PNCPEEVYQLMRKCWEFQPSKRTTF 273

Query: 169 TEI 171
             +
Sbjct: 274 QNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 24/137 (17%)

Query: 39  DFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPI---RWMAWESVRLRKF 91
           D K  N L  K   +K++DF  AT  +        V  + +  +    WMA E + +   
Sbjct: 124 DIKAANILTTKDGVVKLADFGVATKLN-------DVSKDDASVVGTPYWMAPEVIEMSGA 176

Query: 92  TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDI 150
           +T SD+WS G T+ E+  L  + PY  L  +  L  I     DD    + P P+  + ++
Sbjct: 177 STASDIWSLGCTVIEL--LTGNPPYYDLNPMAALFRIVQ---DD----HPPLPEGISPEL 227

Query: 151 LDLMNECWKRSPTERPS 167
            D + +C+++ P  RP+
Sbjct: 228 KDFLMQCFQKDPNLRPT 244

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.1 bits (144), Expect = 7e-11
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 18/142 (12%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI---RWMAWESVRLRKFTTKSDV 97
            N LV     +K++DF     +   +     + T        WMA E +R  ++   +D+
Sbjct: 130 ANILVDSDGVVKLADFGCAKRLGDIET---GEGTGSVRGTPYWMAPEVIRGEEYGRAADI 186

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT--PQTTKDILDLMN 155
           WS G T+ E+    +  P+  L +   +  +  +    GE   +P    +  KD L    
Sbjct: 187 WSLGCTVIEMAT-GKP-PWSELGN--PMAALYKI-GSSGEPPEIPEHLSEEAKDFLRK-- 239

Query: 156 ECWKRSPTERPSFTEI--HLFL 175
            C +R P +RP+  E+  H FL
Sbjct: 240 -CLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 19/150 (12%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
            NG+ H  +K          N L+    E+K+ DF   +   S    R     +    WM
Sbjct: 116 SNGIIHRDIKAA--------NILLTSDGEVKLIDFGLSAQ-LSDTKARNTMVGTPY--WM 164

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL 141
           A E +  + +  K+D+WS G+T  E+       PY  L  ++ L  I+           L
Sbjct: 165 APEVINGKPYDYKADIWSLGITAIELAE--GKPPYSELPPMKALFKIATNG-----PPGL 217

Query: 142 PTPQTTKDIL-DLMNECWKRSPTERPSFTE 170
             P+   D   D + +C +++P +RP+  +
Sbjct: 218 RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQ 247

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 46/137 (33%)

Query: 39  DFK--NCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-LRKFTTK 94
           D K  N L+     ++K++DF     + S          +    +MA E +     ++ K
Sbjct: 117 DLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA--YMAPEVLLGKGYYSEK 174

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLM 154
           SD+WS GV L+E+                                         ++ DL+
Sbjct: 175 SDIWSLGVILYEL----------------------------------------PELKDLI 194

Query: 155 NECWKRSPTERPSFTEI 171
            +  ++ P +RPS  EI
Sbjct: 195 RKMLQKDPEKRPSAKEI 211

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 53.6 bits (129), Expect = 7e-09
 Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV  + +IK+ DF    ++ +S    + D       +M+ E ++  K+T KSDVWS G
Sbjct: 134 NILVNSRGQIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLG 189

Query: 102 VTLWEIL---------NLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD 152
           +++ E+          N+      + +  L++L+ I            LP+    +D+ D
Sbjct: 190 ISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPR-----LPSSDFPEDLRD 244

Query: 153 LMNECWKRSPTERPSFTEIH 172
            ++ C  + PTERP+  ++ 
Sbjct: 245 FVDACLLKDPTERPTPQQLC 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 53.5 bits (128), Expect = 9e-09
 Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 27/141 (19%)

Query: 51  IKISDFATDSDMFSSDYYRVHDNTSLPI--------RWMAWESVRLRKFTTKSDVWSFGV 102
           IK+ DF      FS  Y    D+ SL +         ++A E    ++++ K+D+WS GV
Sbjct: 208 IKLGDFG-----FSKQY---SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGV 259

Query: 103 TLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP 162
            L+E+L L  HRP++G +  E+++ + +     G++   P P  +  +  L++    ++P
Sbjct: 260 ILYELLTL--HRPFKGPSQREIMQQVLY-----GKYDPFPCP-VSSGMKALLDPLLSKNP 311

Query: 163 TERPSFTEIHLFLQRKNLGYV 183
             RP+  ++   L  + L YV
Sbjct: 312 ALRPTTQQL---LHTEFLKYV 329

Length = 478

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 32/142 (22%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-----------YYRVHDNTSLPIRWMAWESVRLR 89
           +N  +     +K+ DF   S + SS            YY            ++ E  + +
Sbjct: 132 QNIFLTSNGLVKLGDFGI-SKVLSSTVDLAKTVVGTPYY------------LSPELCQNK 178

Query: 90  KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD 149
            +  KSD+WS G  L+E+  L    P+EG   LE+   I       G++  +P  Q + +
Sbjct: 179 PYNYKSDIWSLGCVLYELCTL--KHPFEGENLLELALKILK-----GQYPPIP-SQYSSE 230

Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           + +L++   ++ P ERPS  +I
Sbjct: 231 LRNLVSSLLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 18/146 (12%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL-PIRWMAWESVRLRKFTTKS 95
           D K  N L+  K E+KI+DF     + ++       NT +  + +M+ E ++   ++  +
Sbjct: 125 DIKPSNLLINSKGEVKIADFGISKVLENTLDQC---NTFVGTVTYMSPERIQGESYSYAA 181

Query: 96  DVWSFGVTLWEILNLARHRPY---EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD 152
           D+WS G+TL E   L +  P+      +  E+++ I      DG    LP  + + +  D
Sbjct: 182 DIWSLGLTLLECA-LGKF-PFLPPGQPSFFELMQAIC-----DGPPPSLPAEEFSPEFRD 234

Query: 153 LMNECWKRSPTERPSFTEI--HLFLQ 176
            ++ C ++ P +RPS  E+  H F++
Sbjct: 235 FISACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 30/168 (17%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           L  K+ + H  +K          N LV  + +IK+ DF     + +S        T +  
Sbjct: 116 LHEKHKIIHRDVKPS--------NILVNSRGQIKLCDFGVSGQLVNS-----LAKTFVGT 162

Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEG-----LTDLEVLENISHL 131
             +MA E ++   ++ KSD+WS G++L E   LA  R PY           E+L+ I   
Sbjct: 163 SSYMAPERIQGNDYSVKSDIWSLGLSLIE---LATGRFPYPPENDPPDGIFELLQYIV-- 217

Query: 132 HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
              +     LP+ + + D  D +N C  + P ERPS+ E+  H F+++
Sbjct: 218 ---NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 34/150 (22%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR--------WMAWESVRLRKFTT 93
           N L+ K   +K++DF           +          R        WMA E ++ + +  
Sbjct: 146 NILLSKDGSVKLADFG----------FAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGP 195

Query: 94  KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT----TKD 149
           K D+WS G+   E+       PY     L  L  I       G    +P  +     + +
Sbjct: 196 KVDIWSLGIMCIEMAE--GEPPYLREPPLRALFLI----TTKG----IPPLKNPEKWSPE 245

Query: 150 ILDLMNECWKRSPTERPSFTEI--HLFLQR 177
             D +N+C  + P +RPS  E+  H FL++
Sbjct: 246 FKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.3 bits (123), Expect = 4e-08
 Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 17/123 (13%)

Query: 51  IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR--LRKFTTKSDVWSFGVTLWEIL 108
           IK+SD      + S +  RV       I W+A E +R      T  +D WSFG TL EI 
Sbjct: 147 IKLSDPGIPITVLSREE-RV-----ERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200

Query: 109 NLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
                   E L+ L   E     + D      LP P    ++ +L+N+CW   PT+RPSF
Sbjct: 201 ----SNGEEPLSTLSSSEKE-RFYQDQHR---LPMPDC-AELANLINQCWTYDPTKRPSF 251

Query: 169 TEI 171
             I
Sbjct: 252 RAI 254

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 50.9 bits (122), Expect = 6e-08
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 20/139 (14%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL-----RKFTTKSD 96
           + LV + +++KI     +  + S  +  V+         M + S ++      ++T K D
Sbjct: 153 SFLVTENYKLKIICHGLEKILSSPPFKNVNF--------MVYFSYKMLNDIFSEYTIKDD 204

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           ++S GV LWEI       P+E LT  E+ + I  ++ ++   + L  P   K I++    
Sbjct: 205 IYSLGVVLWEI--FTGKIPFENLTTKEIYDLI--INKNNSLKLPLDCPLEIKCIVE---A 257

Query: 157 CWKRSPTERPSFTEIHLFL 175
           C      +RP+  EI   L
Sbjct: 258 CTSHDSIKRPNIKEILYNL 276

Length = 283

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 17/134 (12%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+ +K ++K+ DF    ++ +S        TS    +MA E ++ + ++  SDVWS G
Sbjct: 135 NILLTRKGQVKLCDFGVSGELVNS-LAGTFTGTSF---YMAPERIQGKPYSITSDVWSLG 190

Query: 102 VTLWEILNLARHRPYEGLTDL---EVLENISH-----LHADDGEFIYLPTPQTTKDILDL 153
           +TL E+       P EG   L   E+L  I +     L  + G  I       +++  D 
Sbjct: 191 LTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKW-----SEEFKDF 245

Query: 154 MNECWKRSPTERPS 167
           + +C ++ PT RP+
Sbjct: 246 IKQCLEKDPTRRPT 259

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 17/155 (10%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWES 85
           L  K I   D K  N LV      KISDF       S D Y    N S+   + WMA E 
Sbjct: 124 LHSKGILHRDLKADNLLVDADGICKISDFGISKK--SDDIYDNDQNMSMQGSVFWMAPEV 181

Query: 86  VRL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP- 142
           +    + ++ K D+WS G  + E+   A  RP+   +D E +  +  L          P 
Sbjct: 182 IHSYSQGYSAKVDIWSLGCVVLEMF--AGRRPW---SDEEAIAAMFKLGNKRSAPPIPPD 236

Query: 143 -TPQTTKDILDLMNECWKRSPTERPSFTEI--HLF 174
            +   +   LD +N C+  +P  RP+  E+  H F
Sbjct: 237 VSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 47.2 bits (112), Expect = 9e-07
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 20/149 (13%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV  + ++K+ DF   + + +S   + +  T+    +MA E +   ++   SDVWS G
Sbjct: 125 NMLVNTRGQVKLCDFGVSTQLVNS-IAKTYVGTN---AYMAPERISGEQYGIHSDVWSLG 180

Query: 102 VTLWEILNLARHRPYE-------GLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLM 154
           ++  E L L R  PY         L  L++L+ I      D +   LP  Q ++  +  +
Sbjct: 181 ISFME-LALGRF-PYPQIQKNQGSLMPLQLLQCIV-----DEDPPVLPVGQFSEKFVHFI 233

Query: 155 NECWKRSPTERPSFTEI--HLFLQRKNLG 181
            +C ++ P ERP+   +  H F+ + N G
Sbjct: 234 TQCMRKQPKERPAPENLMDHPFIVQYNDG 262

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 78  IRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           I W+A E V   +  +  +D WSFG TLWEI        Y G   L+           +G
Sbjct: 172 IPWIAPECVEDSKNLSIAADKWSFGTTLWEIC-------YNGEIPLKDKTLAEKERFYEG 224

Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           + + L TP + K++ DLM  C    P +RP F  I
Sbjct: 225 QCM-LVTP-SCKELADLMTHCMNYDPNQRPFFRAI 257

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 14/157 (8%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++   +KK  +     N L+ +  E+K++DF     +  +   R +     P  WMA 
Sbjct: 113 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 170

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLP 142
           E ++   + +K+D+WS G+T  E   LA+   P+  L  ++VL  I   +    E  Y  
Sbjct: 171 EVIKQSAYDSKADIWSLGITAIE---LAKGEPPHSELHPMKVLFLIPKNNPPTLEGNY-- 225

Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               +K + + +  C  + P+ RP+  E+  H F+ R
Sbjct: 226 ----SKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR 258

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 25/146 (17%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV----RLRKFTTKSDV 97
           N L+ +  ++K+ DF     +  S   +  D    P  +MA E +      + +  KSDV
Sbjct: 134 NVLINRNGQVKLCDFGISGYLVDS-VAKTIDAGCKP--YMAPERINPELNQKGYDVKSDV 190

Query: 98  WSFGVTLWEILNLAR-----HRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD 152
           WS G+T+ E+            P++ L   +V+E  S           LP  + + +  D
Sbjct: 191 WSLGITMIELATGRFPYDSWKTPFQQLK--QVVEEPSP---------QLPAEKFSPEFQD 239

Query: 153 LMNECWKRSPTERPSFTEI--HLFLQ 176
            +N+C K++  ERP++ E+  H F +
Sbjct: 240 FVNKCLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 18/151 (11%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
           K GV H  +K          N LV     +K+ DF   + +  +   R       P  WM
Sbjct: 119 KVGVIHRDIKAA--------NILVTNTGNVKLCDFGVAALLNQNSSKRS-TFVGTPY-WM 168

Query: 82  AWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
           A E +   + + TK+D+WS G+T++E+     + PY  +     +  I            
Sbjct: 169 APEVITEGKYYDTKADIWSLGITIYEMAT--GNPPYSDVDAFRAMMLIPKSKPPR----- 221

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           L     +K + + +  C    P ER S  E+
Sbjct: 222 LEDNGYSKLLREFVAACLDEEPKERLSAEEL 252

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N  +     +K+ D       FSS     H     P  +M+ E +    +  KSD+WS G
Sbjct: 136 NVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSDIWSLG 193

Query: 102 VTLWEILNLARHRPYEG----LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
             L+E+  L    P+ G    L  L   + I        ++  LP    ++++ DL++ C
Sbjct: 194 CLLYEMAAL--QSPFYGDKMNLYSL--CKKIEK-----CDYPPLPADHYSEELRDLVSRC 244

Query: 158 WKRSPTERPSFTEIH 172
               P +RP  + + 
Sbjct: 245 INPDPEKRPDISYVL 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 18/150 (12%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
           K G+ H  +K   + IF  K  L      IK+ DF   S +  S+Y         P  +M
Sbjct: 119 KAGILHRDIKT--LNIFLTKAGL------IKLGDFGI-SKILGSEYSMAETVVGTPY-YM 168

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL 141
           + E  +  K+  KSD+W+ G  L+E+L L   R ++    L ++  I       G +  +
Sbjct: 169 SPELCQGVKYNFKSDIWALGCVLYELLTLK--RTFDATNPLNLVVKIVQ-----GNYTPV 221

Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI 171
            +   + +++ L++   ++ P +RP+  E+
Sbjct: 222 VSVY-SSELISLVHSLLQQDPEKRPTADEV 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 30/169 (17%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           L+ K+GV H  +K          N L+     +K+ DF     +  S   +    ++   
Sbjct: 130 LKEKHGVIHRDVKPS--------NILLDASGNVKLCDFGISGRLVDS---KAKTRSAGCA 178

Query: 79  RWMAWESVRLR------KFTTKSDVWSFGVTLWEILNLARHR-PYEGL-TDLEVLENISH 130
            +MA E  R+       K+  ++DVWS G++L E   LA  + PY+   T+ EVL  I  
Sbjct: 179 AYMAPE--RIDPPDPNPKYDIRADVWSLGISLVE---LATGQFPYKNCKTEFEVLTKI-- 231

Query: 131 LHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               +      P    + D    ++ C  +   +RP + E+  H F++R
Sbjct: 232 --LQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 24/142 (16%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSS--DYYRV-HDNTSLPIRWMAWESV-RLRKFTTKSDV 97
           N L+G+   +KI+DF   + +        +V       P  WMA E + ++  +  K+D+
Sbjct: 132 NILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPC-WMAPEVMEQVHGYDFKADI 190

Query: 98  WSFGVTLWEILNLAR-HRPYEGLTDLEVLENI-----SHLH--ADDGEFIYLPTPQTTKD 149
           WSFG+T  E   LA    PY     ++VL          L   AD  ++        +K 
Sbjct: 191 WSFGITAIE---LATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKY--------SKS 239

Query: 150 ILDLMNECWKRSPTERPSFTEI 171
              +++ C ++ P++RP+  E+
Sbjct: 240 FRKMISLCLQKDPSKRPTAEEL 261

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 47/192 (24%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 115 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 161

Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEI--------------LNLARHRPYEGLTDLE 123
           R +M+ E ++   +T +SD+WS G++L E+              L     RP       E
Sbjct: 162 RSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKE 221

Query: 124 VLENISHLHADDG----------EFIY------LPTPQTTKDILDLMNECWKRSPTERPS 167
               +S  H  D           ++I       LP+   + +  D +++C K++P ER  
Sbjct: 222 SHRPVSG-HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD 280

Query: 168 FTEI--HLFLQR 177
             E+  H F++R
Sbjct: 281 LKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 8/92 (8%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP-----IRWMAWESVRLRKFTTKSD 96
           N LV  K  IKISDF   S    ++      N + P     + WMA E V+   +T K+D
Sbjct: 136 NILVDNKGGIKISDFGI-SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKAD 194

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
           +WS G  + E+L   +H P+   T L+ +  I
Sbjct: 195 IWSLGCLVVEMLT-GKH-PFPDCTQLQAIFKI 224

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 7/158 (4%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           + VEH   ++   +     N  +     +K+ D       FSS     H     P  +M+
Sbjct: 117 SAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPY-YMS 174

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            E +    +  KSD+WS G  L+E+  L    P+ G  D   L ++     +  ++  LP
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEMAAL--QSPFYG--DKMNLFSLCQ-KIEQCDYPPLP 229

Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL 180
           T   ++ + +L++ C    P +RP    +H   ++ ++
Sbjct: 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHV 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 11/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+ ++ ++K++DF     + +S   + +     P  WMA E ++   +  K+D+WS G
Sbjct: 128 NILLSEEGDVKLADFGVSGQL-TSTMSKRNTFVGTPF-WMAPEVIKQSGYDEKADIWSLG 185

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           +T  E+       P   L  + VL  I   +        L   + +K   D ++ C  + 
Sbjct: 186 ITAIELAK--GEPPLSDLHPMRVLFLIPKNNPPS-----LEGNKFSKPFKDFVSLCLNKD 238

Query: 162 PTERPSFTEI--HLFLQR 177
           P ERPS  E+  H F+++
Sbjct: 239 PKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 34/154 (22%), Positives = 75/154 (48%), Gaps = 12/154 (7%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++   +KK  +     N L+ ++ ++K++DF     +  +   R +     P  WMA 
Sbjct: 113 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 170

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E ++   + +K+D+WS G+T  E   LA+  P    +D+  +  +  +  ++   +   T
Sbjct: 171 EVIQQSAYDSKADIWSLGITAIE---LAKGEPPN--SDMHPMRVLFLIPKNNPPTL---T 222

Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFL 175
            + +K   + ++ C  + P+ RP+  E+  H F+
Sbjct: 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 31/153 (20%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDY--------YRVHDNTSLPIR--------- 79
           D K  N L+ K   IKI+DF T + +   +             D+     R         
Sbjct: 127 DLKPENILLDKDMHIKITDFGT-AKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGT 185

Query: 80  --WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
             +++ E +  +     SD+W+ G  ++++  L    P+ G  +    + I  L     E
Sbjct: 186 AEYVSPELLNEKPAGKSSDLWALGCIIYQM--LTGKPPFRGSNEYLTFQKILKL-----E 238

Query: 138 FIYLPTPQTTKDILDLMNECWKRSPTERPSFTE 170
           + + P      D  DL+ +     P +R    E
Sbjct: 239 YSFPPNF--PPDAKDLIEKLLVLDPQDRLGVNE 269

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 78  IRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           I W+A E V      +T +D WSFG TL EI       P +  T  E        H    
Sbjct: 184 IPWIAPECVPGGNSLSTAADKWSFGTTLLEIC-FDGEVPLKERTPSEKERFYEKKHR--- 239

Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
               LP P + K++  L+++C    PT+RPSF  I
Sbjct: 240 ----LPEP-SCKELATLISQCLTYEPTQRPSFRTI 269

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)

Query: 78  IRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           I W+  E +   +  +  +D WSFG TLWEI +    +P   L   + L+     H    
Sbjct: 168 IPWVPPECIENPQNLSLAADKWSFGTTLWEIFS-GGDKPLSALDSQKKLQFYEDRHQ--- 223

Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
               LP P+ T ++ +L+N+C    P  RPSF  I
Sbjct: 224 ----LPAPKWT-ELANLINQCMDYEPDFRPSFRAI 253

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 28/130 (21%)

Query: 51  IKISDFA-----TDSDMFSSDY----YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           +K+ DF           F+  Y    Y           +M+ E +    +  KSD+WS G
Sbjct: 149 VKLGDFGLAKILGHDSSFAKTYVGTPY-----------YMSPEQLNHMSYDEKSDIWSLG 197

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
             ++E+   A   P+     L++   I      +G+F  +P  + + ++ +++       
Sbjct: 198 CLIYEL--CALSPPFTARNQLQLASKIK-----EGKFRRIP-YRYSSELNEVIKSMLNVD 249

Query: 162 PTERPSFTEI 171
           P +RPS  E+
Sbjct: 250 PDKRPSTEEL 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP-TPQTT 147
           R +  K+D+WS G  L+E+  L +H P+EG        N+  L     +  + P +P  +
Sbjct: 177 RPYNNKTDIWSLGCVLYELCTL-KH-PFEG-------NNLHQLVLKICQGYFAPISPNFS 227

Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
           +D+  L+++ +K SP +RPS T I
Sbjct: 228 RDLRSLISQLFKVSPRDRPSITSI 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 25/146 (17%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR-WMAWESVRLR------KFTTK 94
           N LV    ++K+ DF    ++ +S        T++  + +MA E ++         +T +
Sbjct: 133 NVLVNGNGQVKLCDFGVSGNLVAS-----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQ 187

Query: 95  SDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENI-SHLHAD-DGEFIYLPTPQTTKDIL 151
           SDVWS G++   IL +A  R PY      E   NI + L A  DG+   LP    + D  
Sbjct: 188 SDVWSLGLS---ILEMALGRYPYPP----ETYANIFAQLSAIVDGDPPTLP-SGYSDDAQ 239

Query: 152 DLMNECWKRSPTERPSFTEI--HLFL 175
           D + +C  + P  RP++ ++  H +L
Sbjct: 240 DFVAKCLNKIPNRRPTYAQLLEHPWL 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 42.0 bits (98), Expect = 6e-05
 Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++   ++K  +     N L+ ++ ++K++DF     +  +   R +     P  WMA 
Sbjct: 113 GLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 170

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLP 142
           E ++   +  K+D+WS G+T  E   LA+   P   L  + VL  I        E     
Sbjct: 171 EVIKQSAYDFKADIWSLGITAIE---LAKGEPPNSDLHPMRVLFLIPKNSPPTLE----- 222

Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
             Q +K   + +  C  + P  RP+  E+  H F+ R
Sbjct: 223 -GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 41.7 bits (98), Expect = 8e-05
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
           R +  KSD+W+ G  L+E+  L +H    G     VL+ I       G +  +     + 
Sbjct: 176 RPYNNKSDIWALGCVLYEMCTL-KHAFEAGNMKNLVLKIIR------GSYPPVS-SHYSY 227

Query: 149 DILDLMNECWKRSPTERPSFTEI 171
           D+ +L+++ +KR+P +RPS   I
Sbjct: 228 DLRNLVSQLFKRNPRDRPSVNSI 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 28/147 (19%)

Query: 35  IKIFDF----KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           IK+ DF    +   VG           T S+M  S    +H        WMA E +    
Sbjct: 141 IKLIDFGCARRLAWVGLH--------GTHSNMLKS----MHGTPY----WMAPEVINESG 184

Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +  KSD+WS G T++E   +A  +P   L  ++ L  + ++ A  G    LP    +   
Sbjct: 185 YGRKSDIWSIGCTVFE---MATGKP--PLASMDRLAAMFYIGAHRGLMPRLPD-SFSAAA 238

Query: 151 LDLMNECWKRSPTERPSFTEI--HLFL 175
           +D +  C  R   ERPS  ++  H FL
Sbjct: 239 IDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 24/144 (16%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR---KFTTKSDVW 98
           N L+ +  ++K++DF + S    ++ +        P  WMA E +      ++  K DVW
Sbjct: 151 NILLTEPGQVKLADFGSASKSSPANSF-----VGTPY-WMAPEVILAMDEGQYDGKVDVW 204

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT---TKDILDLMN 155
           S G+T  E   LA  +P   L ++  +  + H+  +D      PT Q+   T      ++
Sbjct: 205 SLGITCIE---LAERKP--PLFNMNAMSALYHIAQNDS-----PTLQSNEWTDSFRGFVD 254

Query: 156 ECWKRSPTERPSFTEI--HLFLQR 177
            C ++ P ERP+  E+  H F++R
Sbjct: 255 YCLQKIPQERPASAELLRHDFVRR 278

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 12/104 (11%)

Query: 80  WMAWESVRLR---KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           WMA E +      ++  K DVWS G+T  E   LA  +P   L ++  +  + H+  +D 
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIE---LAERKP--PLFNMNAMSALYHIAQNDS 231

Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK 178
               L +   +    + ++ C ++ P +RPS  E+  H F+ R+
Sbjct: 232 P--TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 80  WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI 139
           ++A E  R + ++ K+D++S GV L+E+L L   RP++G    E +E + H     G + 
Sbjct: 211 YVAPEIWRRKPYSKKADMFSLGVLLYELLTL--KRPFDG----ENMEEVMH-KTLAGRYD 263

Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPS 167
            LP P  + ++ +++       P  RPS
Sbjct: 264 PLP-PSISPEMQEIVTALLSSDPKRRPS 290

Length = 496

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 19/145 (13%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV-----RLRKFTTKSD 96
           N L+    ++K++DF   +   S+   R       P  WMA E V     +   +  K+D
Sbjct: 133 NILLTLDGDVKLADFGVSAKNKSTLQKR-DTFIGTP-YWMAPEVVACETFKDNPYDYKAD 190

Query: 97  VWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLM 154
           +WS G+TL E   LA+   P+  L  + VL  I        E   L  P   +    D +
Sbjct: 191 IWSLGITLIE---LAQMEPPHHELNPMRVLLKIL-----KSEPPTLDQPSKWSSSFNDFL 242

Query: 155 NECWKRSPTERPSFTEI--HLFLQR 177
             C  + P +RP+  E+  H F+  
Sbjct: 243 KSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.5 bits (92), Expect = 4e-04
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 21/146 (14%)

Query: 27  HSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD-MFSSDYYRVHDNTSLPIRWMAWES 85
           H  LK K   IF   N L       KI DF      M S D       T     +M+ E+
Sbjct: 129 HRDLKAK--NIFLKNNLL-------KIGDFGVSRLLMGSCDLATTFTGTP---YYMSPEA 176

Query: 86  VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ 145
           ++ + + +KSD+WS G  L+E+  LA    +EG   L V+  I      +G    LP   
Sbjct: 177 LKHQGYDSKSDIWSLGCILYEMCCLA--HAFEGQNFLSVVLRIV-----EGPTPSLPE-T 228

Query: 146 TTKDILDLMNECWKRSPTERPSFTEI 171
            ++ +  +M     + P+ RPS  EI
Sbjct: 229 YSRQLNSIMQSMLNKDPSLRPSAAEI 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 24/159 (15%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L  K I   D K  N ++ +   IKI+DF    +    D  R       P  ++A E ++
Sbjct: 112 LHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN-RASTFCGTP-DYIAPEILQ 169

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-- 145
             K+T   D WSFGV L+E+  L    P+ G  + E+ E+I            + TP   
Sbjct: 170 GLKYTFSVDWWSFGVLLYEM--LIGQSPFHGDDEDELFESIR-----------VDTPHYP 216

Query: 146 --TTKDILDLMNECWKRSPTERPSFT---EIHLFLQRKN 179
              TK+  D++ + ++R PT R         H F +  N
Sbjct: 217 RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 38.9 bits (90), Expect = 7e-04
 Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 24/145 (16%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR---KFTTKSDVW 98
           N L+ +  ++K++DF + S    ++ +        P  WMA E +      ++  K DVW
Sbjct: 155 NILLTEPGQVKLADFGSASIASPANSF-----VGTPY-WMAPEVILAMDEGQYDGKVDVW 208

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK---DILDLMN 155
           S G+T  E   LA  +P   L ++  +  + H+  ++      PT Q+ +      + ++
Sbjct: 209 SLGITCIE---LAERKP--PLFNMNAMSALYHIAQNES-----PTLQSNEWSDYFRNFVD 258

Query: 156 ECWKRSPTERPSFTEI--HLFLQRK 178
            C ++ P +RP+  E+  H+F+ R+
Sbjct: 259 SCLQKIPQDRPTSEELLKHMFVLRE 283

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.4 bits (89), Expect = 9e-04
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 14/150 (9%)

Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMA 82
           GV+H   K+   +    KN  + +  ++K+ DF +   + S   Y   +  T   +    
Sbjct: 112 GVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEI 171

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
           WE++    +  KSD+WS G  L+E+  L +H P++         +  +L     +  Y P
Sbjct: 172 WENM---PYNNKSDIWSLGCILYELCTL-KH-PFQA-------NSWKNLILKVCQGSYKP 219

Query: 143 TP-QTTKDILDLMNECWKRSPTERPSFTEI 171
            P   + ++  L+ + +KR+P  RPS T I
Sbjct: 220 LPSHYSYELRSLIKQMFKRNPRSRPSATTI 249

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 32/147 (21%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVWS 99
           N L+ ++ + K++DF     +  +   R   NT +  P  WMA E ++   +  K+D+WS
Sbjct: 129 NILLNEEGQAKLADFGVSGQLTDTMAKR---NTVIGTPF-WMAPEVIQEIGYNNKADIWS 184

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT--PQT-------TKDI 150
            G+T  E   +A  +P             S +H     F+ +P   P T       + + 
Sbjct: 185 LGITAIE---MAEGKP-----------PYSDIHPMRAIFM-IPNKPPPTLSDPEKWSPEF 229

Query: 151 LDLMNECWKRSPTERPSFTEI--HLFL 175
            D + +C  + P ERPS  ++  H F+
Sbjct: 230 NDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 21/142 (14%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI----RWMAW 83
           L KK I   D K  N L+ K   IKI+DF     M   +     +  +        ++A 
Sbjct: 112 LHKKGIIYRDLKLDNVLLDKDGHIKIADFG----MCKENMNG--EGKASTFCGTPDYIAP 165

Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E ++ +K+    D WSFGV L+E+  L    P+ G  + E+ ++I +      +  + P 
Sbjct: 166 EILKGQKYNESVDWWSFGVLLYEM--LIGQSPFHGEDEDELFDSILN------DRPHFPR 217

Query: 144 PQTTKDILDLMNECWKRSPTER 165
              +K+  D +++ ++R PT+R
Sbjct: 218 -WISKEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 40/151 (26%), Positives = 61/151 (40%), Gaps = 35/151 (23%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESV-----RLRKFTTK 94
           N L+ K  E+K+ DF   + + S+   R   NT +  P  WMA E +         +  +
Sbjct: 143 NILLTKNAEVKLVDFGVSAQLDSTLGRR---NTFIGTPY-WMAPEVIACDEQPDASYDAR 198

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT------- 147
           SDVWS G+T  E   LA  +P            +  +H     F     P  T       
Sbjct: 199 SDVWSLGITAIE---LADGKP-----------PLCDMHPMRALFKIPRNPPPTLKSPENW 244

Query: 148 -KDILDLMNECWKRSPTERPSFTEI--HLFL 175
            K   D ++EC  ++  +RP   E+  H F+
Sbjct: 245 SKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 6/115 (5%)

Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
           FSS     H     P  +M+ E +    +  KSD+WS G  L+E+  L    P+ G  D 
Sbjct: 156 FSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSDIWSLGCLLYEMAAL--QSPFYG--DK 210

Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
             L ++     +  ++  LP+   ++++  L+N C    P +RP  T ++   +R
Sbjct: 211 MNLYSLCK-KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 80  WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI 139
           +MA E  + R ++ KSD+WS G  L+E+   A   P+E  +  ++   +       G++ 
Sbjct: 167 YMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA--PPFEARSMQDLRYKVQR-----GKYP 219

Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
            +P P  ++D+ + +    +  P  RP+  +I
Sbjct: 220 PIP-PIYSQDLQNFIRSMLQVKPKLRPNCDKI 250

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 14/90 (15%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 119 LREKHQIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 165

Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEI 107
           R +M+ E ++   ++ +SD+WS G++L E+
Sbjct: 166 RSYMSPERLQGTHYSVQSDIWSMGLSLVEL 195

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR---KFTTKSDVW 98
           N L+ +   +K+ DF + S M  ++ +        P  WMA E +      ++  K DVW
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAPANXF-----VGTPY-WMAPEVILAMDEGQYDGKVDVW 198

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S G+T  E   LA  +P   L ++  +  + H+  ++     L +   ++   + ++ C 
Sbjct: 199 SLGITCIE---LAERKP--PLFNMNAMSALYHIAQNESPA--LQSGHWSEYFRNFVDSCL 251

Query: 159 KRSPTERPSFTEI--HLFLQRK 178
           ++ P +RP+   +  H F+ R+
Sbjct: 252 QKIPQDRPTSEVLLKHRFVLRE 273

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 13/148 (8%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+G    +K++DF   + +      R       P  WMA E V  + +  K D+WS G
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPY-WMAPEVVTRKAYGPKVDIWSLG 203

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           +   E++      PY     L  L    +L A +G    L  P+    I  D +N C   
Sbjct: 204 IMAIEMIE--GEPPYLNENPLRAL----YLIATNGT-PELQNPEKLSAIFRDFLNRCLDM 256

Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPMNS 188
              +R S  E+   LQ + L    P++S
Sbjct: 257 DVEKRGSAKEL---LQHQFLKIAKPLSS 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 37.1 bits (87), Expect = 0.003
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 11/129 (8%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+     IK++DF   +   SS+  R +     P  ++A E +  + +    D WS G
Sbjct: 123 NILLDADGHIKLTDFGL-AKELSSEGSRTNTFCGTP-EYLAPEVLLGKGYGKAVDWWSLG 180

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           V L+E+  L    P+      E+ E I  L       +  P    + +  DL++   ++ 
Sbjct: 181 VLLYEM--LTGKPPFYAEDRKEIYEKI--LKDP----LRFP-EFLSPEARDLISGLLQKD 231

Query: 162 PTERPSFTE 170
           PT+R     
Sbjct: 232 PTKRLGSGG 240

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 14/90 (15%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 119 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 165

Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEI 107
           R +M+ E ++   ++ +SD+WS G++L E+
Sbjct: 166 RSYMSPERLQGTHYSVQSDIWSMGLSLVEM 195

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 37.0 bits (85), Expect = 0.004
 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 13/148 (8%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+G    +K++DF   + +      R       P  WMA E V  + +  K D+WS G
Sbjct: 145 NVLLGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPY-WMAPEVVTRKAYGPKVDIWSLG 202

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           +   E++      PY     L  L    +L A +G    L  P+    I  D +N C + 
Sbjct: 203 IMAIEMVE--GEPPYLNENPLRAL----YLIATNGT-PELQNPEKLSPIFRDFLNRCLEM 255

Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPMNS 188
              +R S  E+   LQ   L    P++S
Sbjct: 256 DVEKRGSAKEL---LQHPFLKLAKPLSS 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
KOG0581|consensus	364		100.0
KOG0592|consensus	604		100.0
KOG0197|consensus	468		100.0
KOG0615|consensus	475		100.0
KOG0192|consensus	362		100.0
KOG0598|consensus	357		100.0
KOG0575|consensus	592		100.0
KOG0578|consensus	550		100.0
KOG1026|consensus	774		99.98
KOG0694|consensus	694		99.98
KOG0198|consensus	313		99.97
KOG0582|consensus	516		99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
KOG0583|consensus	370		99.97
KOG0616|consensus	355		99.97
KOG0591|consensus	375		99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
KOG0033|consensus	355		99.97
KOG0599|consensus	411		99.97
KOG0593|consensus	396		99.97
KOG0585|consensus	576		99.97
KOG0658|consensus	364		99.97
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.97
KOG0660|consensus	359		99.97
KOG0201|consensus	467		99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
KOG0605|consensus	550		99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
KOG0659|consensus	318		99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
KOG0661|consensus	538		99.97
KOG0597|consensus	808		99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.96
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
PHA02988	283	hypothetical protein; Provisional	99.96
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.96
KOG0594|consensus	323		99.96
KOG0588|consensus	786		99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
KOG4721|consensus	904		99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.96
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.96
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.96
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.96
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.96
KOG0193|consensus	678		99.96
PHA02882	294	putative serine/threonine kinase; Provisional	99.96
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.96
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.96
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.96
KOG1095|consensus	1025		99.96
KOG0986|consensus	591		99.96
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
PTZ00284	467	protein kinase; Provisional	99.96
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.96
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.96
KOG1094|consensus	807		99.96
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.96
KOG0600|consensus	560		99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.96
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
KOG0663|consensus	419		99.96
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.96
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.96
KOG0610|consensus	459		99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.96
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.95
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.95
KOG0983|consensus	391		99.95
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.95
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.95
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.95
KOG0595|consensus	429		99.95
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.95
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.95
KOG0596|consensus	677		99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.95
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.95
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.95
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.95
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.95
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.95
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.95
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.95
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.95
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.95
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.95
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.95
PHA03210	501	serine/threonine kinase US3; Provisional	99.95
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
KOG0603|consensus	612		99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
KOG0577|consensus	948		99.95
KOG0579|consensus	1187		99.95
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.95
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.95
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.95
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.95
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.95
KOG0589|consensus	426		99.95
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
KOG0196|consensus	996		99.95
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.95
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.95
KOG0611|consensus	668		99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.95
KOG0032|consensus	382		99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
KOG0194|consensus	474		99.95
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.95
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.95
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.95
KOG0690|consensus	516		99.95
KOG0667|consensus	586		99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
KOG1187|consensus	361		99.95
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.95
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.94
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.94
KOG4278|consensus	1157		99.94
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.94
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
KOG0604|consensus	400		99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.94
KOG2345|consensus	302		99.94
KOG0614|consensus	732		99.94
KOG0200|consensus	609		99.94
KOG4257|consensus	974		99.94
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.94
KOG1024|consensus	563		99.94
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
KOG0580|consensus	281		99.94
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.94
KOG4279|consensus	1226		99.94
KOG1989|consensus	738		99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
KOG0671|consensus	415		99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.94
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
KOG0199|consensus	1039		99.94
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
KOG0696|consensus	683		99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.93
KOG4717|consensus	864		99.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.93
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.93
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.93
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.93
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.93
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.93
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.93
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.93
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.93
KOG4645|consensus	1509		99.93
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.93
KOG1035|consensus	1351		99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.92
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.92
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
KOG0665|consensus	369		99.92
KOG0584|consensus	632		99.92
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.92
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.92
KOG1027|consensus	903		99.92
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.92
KOG0669|consensus	376		99.92
KOG0612|consensus	1317		99.92
KOG0574|consensus	502		99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.91
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.91
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.91
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.91
KOG1006|consensus	361		99.91
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.91
KOG4236|consensus	888		99.91
KOG0586|consensus	596		99.9
KOG0664|consensus	449		99.9
KOG0666|consensus	438		99.9
KOG3653|consensus	534		99.9
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
KOG0695|consensus	593		99.9
KOG1025|consensus	1177		99.89
KOG0587|consensus	953		99.89
KOG0662|consensus	292		99.89
KOG0608|consensus	1034		99.88
KOG0607|consensus	463		99.88
KOG0670|consensus	752		99.87
KOG0984|consensus	282		99.87
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.87
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.87
KOG0668|consensus	338		99.86
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.86
KOG1151|consensus	775		99.83
KOG4250|consensus	732		99.83
KOG0590|consensus	601		99.83
KOG2052|consensus	513		99.81
KOG1345|consensus	378		99.8
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.78
KOG1290|consensus	590		99.77
KOG0606|consensus	1205		99.76
KOG0576|consensus	829		99.75
KOG1167|consensus	418		99.72
KOG1152|consensus	772		99.7
KOG1023|consensus	484		99.68
KOG1033|consensus	516		99.67
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.67
KOG1240|consensus	1431		99.66
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.64
KOG0603|consensus	612		99.6
KOG4158|consensus	598		99.6
KOG1164|consensus	322		99.59
KOG0195|consensus	448		99.59
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.57
KOG1165|consensus	449		99.53
KOG1163|consensus	341		99.46
KOG0590|consensus	601		99.33
PRK09188	365	serine/threonine protein kinase; Provisional	99.19
KOG1166|consensus	974		99.1
PRK12274	218	serine/threonine protein kinase; Provisional	99.08
KOG2137|consensus	700		99.01
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.0
COG4248	637	Uncharacterized protein with protein kinase and he	98.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.86
KOG0606|consensus	1205		98.85
KOG1266|consensus	458		98.77
KOG0601|consensus	524		98.65
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.65
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.63
smart00090	237	RIO RIO-like kinase.	98.58
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.49
PRK10345	210	hypothetical protein; Provisional	98.34
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.33
PRK14879	211	serine/threonine protein kinase; Provisional	98.3
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.3
KOG1243|consensus	690		98.12
KOG0601|consensus	524		98.12
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.87
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.86
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.7
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.6
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.56
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.42
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.4
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.39
KOG3087|consensus	229		97.2
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.73
KOG3741|consensus	655		96.71
PRK09902	216	hypothetical protein; Provisional	96.37
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.33
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.09
KOG1035|consensus	1351		95.23
PHA03111	444	Ser/Thr kinase; Provisional	94.47
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.21
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	94.12
PRK05231	319	homoserine kinase; Provisional	94.09
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	93.83
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	92.95
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	92.82
PF01636	239	APH: Phosphotransferase enzyme family This family	92.5
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	92.39
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	92.19
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	92.04
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	90.93
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	90.8
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	90.7
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	90.68
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	90.41
KOG1093|consensus	725		90.22
PRK10271	188	thiK thiamine kinase; Provisional	90.21
COG2334	331	Putative homoserine kinase type II (protein kinase	90.1
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	90.01
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	89.88
COG0661	517	AarF Predicted unusual protein kinase [General fun	89.82
KOG2268|consensus	465		89.79
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	89.42
KOG1826|consensus	2724		88.81
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	88.43
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	86.45
PRK06148	1013	hypothetical protein; Provisional	86.32
PLN02236	344	choline kinase	85.86
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	85.79
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	85.61
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	83.42
KOG1235|consensus	538		80.66
PRK11768	325	serine/threonine protein kinase; Provisional	80.08

>KOG0581|consensus

Probab=100.00  E-value=4.4e-37  Score=225.27  Aligned_cols=154  Identities=25%  Similarity=0.378  Sum_probs=130.7

Q ss_pred             ccccchhhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .+|.+++.||.||| +++|+||||||        .|+|++..|.+||||||.++.+.+.    ......||..|||||-+
T Consensus       182 ~ia~~VL~GL~YLh~~~~IIHRDIKP--------sNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi  249 (364)
T KOG0581|consen  182 KIARAVLRGLSYLHEERKIIHRDIKP--------SNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERI  249 (364)
T ss_pred             HHHHHHHHHHHHHhhccCeeeccCCH--------HHeeeccCCCEEeccccccHHhhhh----hcccccccccccChhhh
Confidence            46788999999999 59999999999        9999999999999999999887654    55678899999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-----CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-----TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      .+..++.++||||||+.++|++  .|.+||...     ...++...+..     +..+..+...+++++++|+..||++|
T Consensus       250 ~g~~Ys~~sDIWSLGLsllE~a--~GrfP~~~~~~~~~~~~~Ll~~Iv~-----~ppP~lP~~~fS~ef~~FV~~CL~Kd  322 (364)
T KOG0581|consen  250 SGESYSVKSDIWSLGLSLLELA--IGRFPYPPPNPPYLDIFELLCAIVD-----EPPPRLPEGEFSPEFRSFVSCCLRKD  322 (364)
T ss_pred             cCCcCCcccceecccHHHHHHh--hCCCCCCCcCCCCCCHHHHHHHHhc-----CCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            9999999999999999999999  677888774     44556666653     22333444468999999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhccC
Q psy4332         162 PTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~~  180 (188)
                      |.+||++.|+  |+|+++...
T Consensus       323 p~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  323 PSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             cccCCCHHHHhcCHHHhhccc
Confidence            9999999999  899886543

>KOG0592|consensus

Probab=100.00  E-value=5.4e-35  Score=223.11  Aligned_cols=163  Identities=23%  Similarity=0.327  Sum_probs=137.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc----------c-ccCCCC
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY----------R-VHDNTS   75 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~----------~-~~~~~~   75 (188)
                      |..|.+|+.|+.|+|++|||||||||        +|||++.++++||+|||.++.+......          . ......
T Consensus       177 R~YAAeIldAleylH~~GIIHRDlKP--------ENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFV  248 (604)
T KOG0592|consen  177 RFYAAEILDALEYLHSNGIIHRDLKP--------ENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFV  248 (604)
T ss_pred             HHHHHHHHHHHHHHHhcCceeccCCh--------hheeEcCCCcEEEeeccccccCChhhccccCccCcccccCccccee
Confidence            45678999999999999999999999        9999999999999999999887533211          0 113467


Q ss_pred             CCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          76 LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        76 ~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      ||..|.+||++.....+..+|+|+|||++|.|+  .|.+||.+.++.-+.++++...+.       ..+.+++.+.+|+.
T Consensus       249 GTAeYVSPElL~~~~~~~~sDiWAlGCilyQml--aG~PPFra~NeyliFqkI~~l~y~-------fp~~fp~~a~dLv~  319 (604)
T KOG0592|consen  249 GTAEYVSPELLNDSPAGPSSDLWALGCILYQML--AGQPPFRAANEYLIFQKIQALDYE-------FPEGFPEDARDLIK  319 (604)
T ss_pred             eeecccCHHHhcCCCCCcccchHHHHHHHHHHh--cCCCCCccccHHHHHHHHHHhccc-------CCCCCCHHHHHHHH
Confidence            899999999999999999999999999999999  789999999999999998865432       23567789999999


Q ss_pred             HHhccCCCCCCCHHHH--HHHHHhc-----cCCCCCCC
Q psy4332         156 ECWKRSPTERPSFTEI--HLFLQRK-----NLGYVPPM  186 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el--~~~l~~~-----~~~~~~~~  186 (188)
                      +.|..||.+|++++++  |+||..+     ++...|++
T Consensus       320 KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~~PP~l  357 (604)
T KOG0592|consen  320 KLLVRDPSDRLTSQQIKAHPFFEGVDWENLWQQTPPKL  357 (604)
T ss_pred             HHHccCccccccHHHHhhCcccccCChhhhhhcCCCcc
Confidence            9999999999999999  7887754     44544443

>KOG0197|consensus

Probab=100.00  E-value=1e-34  Score=221.23  Aligned_cols=161  Identities=30%  Similarity=0.530  Sum_probs=138.3

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ...+|.+|+.|..||.++++|||||-.        .|||++.+..+||+|||+++... ...+.......-+..|.|||.
T Consensus       305 Ll~~a~qIaeGM~YLes~~~IHRDLAA--------RNiLV~~~~~vKIsDFGLAr~~~-d~~Y~~~~~~kfPIkWtAPEa  375 (468)
T KOG0197|consen  305 LLDFAAQIAEGMAYLESKNYIHRDLAA--------RNILVDEDLVVKISDFGLARLIG-DDEYTASEGGKFPIKWTAPEA  375 (468)
T ss_pred             HHHHHHHHHHHHHHHHhCCccchhhhh--------hheeeccCceEEEcccccccccC-CCceeecCCCCCCceecCHHH
Confidence            345788999999999999999999999        99999999999999999999543 344555555556778999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..+.++.||||||||++++|++| .|..||.+....+..+.+..+.     +... +..+|+.+.++|..||..+|++|
T Consensus       376 ~~~~~FS~kSDVWSFGVlL~E~fT-~G~~py~~msn~ev~~~le~Gy-----Rlp~-P~~CP~~vY~lM~~CW~~~P~~R  448 (468)
T KOG0197|consen  376 LNYGKFSSKSDVWSFGVLLWELFT-YGRVPYPGMSNEEVLELLERGY-----RLPR-PEGCPDEVYELMKSCWHEDPEDR  448 (468)
T ss_pred             HhhCCcccccceeehhhhHHHHhc-cCCCCCCCCCHHHHHHHHhccC-----cCCC-CCCCCHHHHHHHHHHhhCCcccC
Confidence            999999999999999999999999 5899999999999998886532     2222 25689999999999999999999


Q ss_pred             CCHHHHHHHHHhccCCC
Q psy4332         166 PSFTEIHLFLQRKNLGY  182 (188)
Q Consensus       166 ps~~el~~~l~~~~~~~  182 (188)
                      |||+.+...+.++....
T Consensus       449 PtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  449 PTFETLREVLEDFFTST  465 (468)
T ss_pred             CCHHHHHHHHHHhhhcc
Confidence            99999998888876543

>KOG0615|consensus

Probab=100.00  E-value=5.7e-36  Score=221.98  Aligned_cols=155  Identities=22%  Similarity=0.272  Sum_probs=128.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .+.||+.|+.|||++||+||||||        +|||++.+   ..+||+|||+++...+..   .....+||+.|.|||+
T Consensus       281 ~f~Qll~avkYLH~~GI~HRDiKP--------eNILl~~~~e~~llKItDFGlAK~~g~~s---fm~TlCGTpsYvAPEV  349 (475)
T KOG0615|consen  281 LFKQLLTAVKYLHSQGIIHRDIKP--------ENILLSNDAEDCLLKITDFGLAKVSGEGS---FMKTLCGTPSYVAPEV  349 (475)
T ss_pred             HHHHHHHHHHHHHHcCcccccCCc--------ceEEeccCCcceEEEecccchhhccccce---ehhhhcCCccccChhh
Confidence            467899999999999999999999        99999877   779999999999876442   4467889999999999


Q ss_pred             hhcCCC---CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          86 VRLRKF---TTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        86 ~~~~~~---~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +.+..+   ..++|+||+||++|-++  +|.+||++..... +.+++..+.....   ++.+..++++..+||.+||..|
T Consensus       350 l~~kg~~~~~~kVDiWSlGcvLfvcL--sG~pPFS~~~~~~sl~eQI~~G~y~f~---p~~w~~Iseea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  350 LASKGVEYYPSKVDIWSLGCVLFVCL--SGYPPFSEEYTDPSLKEQILKGRYAFG---PLQWDRISEEALDLINWMLVVD  424 (475)
T ss_pred             eecCCeecccchheeeeccceEEEEe--ccCCCcccccCCccHHHHHhcCccccc---ChhhhhhhHHHHHHHHHhhEeC
Confidence            987653   34789999999999999  7789999876444 6676765443332   2334667899999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhcc
Q psy4332         162 PTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~  179 (188)
                      |++|||+.|+  |+||+...
T Consensus       425 P~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  425 PENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             cccCcCHHHHhcChhhhccc
Confidence            9999999999  89999543

>KOG0192|consensus

Probab=100.00  E-value=8.7e-34  Score=214.96  Aligned_cols=157  Identities=32%  Similarity=0.461  Sum_probs=130.3

Q ss_pred             Cccccchhhhhhhhcccc-cccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           7 RPQASNLAVVPLLRNKNG-VEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~-i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++|.+|+.|+.|||+++ |||||||+        +|+|++.++ ++||+|||+++......  .......||..|||||
T Consensus       145 l~~aldiArGm~YLH~~~~iIHrDLK~--------~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPE  214 (362)
T KOG0192|consen  145 LRIALDIARGMEYLHSEGPIIHRDLKS--------DNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPE  214 (362)
T ss_pred             HHHHHHHHHHHHHHhcCCCeeecccCh--------hhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChh
Confidence            467889999999999999 99999999        999999997 99999999987765432  2233467899999999


Q ss_pred             hhh--cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          85 SVR--LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        85 ~~~--~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ++.  ...++.|+||||||+++||++  ++..||.+....+....+....    .++..+ ..++..+..++.+||..||
T Consensus       215 v~~~~~~~~~~K~DvySFgIvlWEl~--t~~~Pf~~~~~~~~~~~v~~~~----~Rp~~p-~~~~~~l~~l~~~CW~~dp  287 (362)
T KOG0192|consen  215 VLRGEKSPYTEKSDVYSFGIVLWELL--TGEIPFEDLAPVQVASAVVVGG----LRPPIP-KECPPHLSSLMERCWLVDP  287 (362)
T ss_pred             hhcCCCCcCCccchhhhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhcC----CCCCCC-ccCCHHHHHHHHHhCCCCC
Confidence            999  458999999999999999999  6689999998866666665432    222222 2378899999999999999


Q ss_pred             CCCCCHHHHHHHHHhccC
Q psy4332         163 TERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el~~~l~~~~~  180 (188)
                      +.||++.+++..|+.+..
T Consensus       288 ~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  288 SRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CcCCCHHHHHHHHHHHHH
Confidence            999999999888886644

>KOG0598|consensus

Probab=100.00  E-value=3e-34  Score=210.29  Aligned_cols=152  Identities=22%  Similarity=0.322  Sum_probs=130.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+|+.|+.|||++||+|||+||        +|||++.+|+++|+|||+++.....+.  .....+||+.|||||++..
T Consensus       130 YlaEi~lAL~~LH~~gIiyRDlKP--------ENILLd~~GHi~LtDFgL~k~~~~~~~--~t~tfcGT~eYmAPEil~~  199 (357)
T KOG0598|consen  130 YLAEIVLALGYLHSKGIIYRDLKP--------ENILLDEQGHIKLTDFGLCKEDLKDGD--ATRTFCGTPEYMAPEILLG  199 (357)
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCH--------HHeeecCCCcEEEeccccchhcccCCC--ccccccCCccccChHHHhc
Confidence            456889999999999999999999        999999999999999999986644432  3345789999999999999


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++..+|.||+|+++|+|+  +|..||.+.+..+..+.+....      ...+....+.+.++++.+++..||++|.  
T Consensus       200 ~gy~~~vDWWsLGillYeML--~G~pPF~~~~~~~~~~~I~~~k------~~~~p~~ls~~ardll~~LL~rdp~~RLg~  271 (357)
T KOG0598|consen  200 KGYDKAVDWWSLGILLYEML--TGKPPFYAEDVKKMYDKILKGK------LPLPPGYLSEEARDLLKKLLKRDPRQRLGG  271 (357)
T ss_pred             CCCCcccchHhHHHHHHHHh--hCCCCCcCccHHHHHHHHhcCc------CCCCCccCCHHHHHHHHHHhccCHHHhcCC
Confidence            99999999999999999999  7789999999888888886543      2333345788999999999999999996  


Q ss_pred             --CHHHH--HHHHHhc
Q psy4332         167 --SFTEI--HLFLQRK  178 (188)
Q Consensus       167 --s~~el--~~~l~~~  178 (188)
                        ++.++  |++|..+
T Consensus       272 ~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  272 PGDAEEIKRHPFFKGI  287 (357)
T ss_pred             CCChHHhhcCcccccC
Confidence              57777  8888866

>KOG0575|consensus

Probab=100.00  E-value=4.1e-34  Score=220.77  Aligned_cols=152  Identities=21%  Similarity=0.350  Sum_probs=132.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ....||+.|+.|||+++|+|||||.        .|++++++.++||+|||+|..+...++  .....+||++|.|||++.
T Consensus       122 y~l~QIv~GlkYLH~~~IiHRDLKL--------GNlfL~~~~~VKIgDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~  191 (592)
T KOG0575|consen  122 YFLRQIVEGLKYLHSLGIIHRDLKL--------GNLFLNENMNVKIGDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLN  191 (592)
T ss_pred             HHHHHHHHHHHHHHhcCceecccch--------hheeecCcCcEEecccceeeeecCccc--ccceecCCCcccChhHhc
Confidence            3457899999999999999999999        999999999999999999998865543  446788999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ...-+..+||||+||++|.++  .|.+||....-.+...++......      +| ...+.+..+||.++|+.||.+|||
T Consensus       192 k~gHsfEvDiWSlGcvmYtLL--~G~PPFetk~vkety~~Ik~~~Y~------~P-~~ls~~A~dLI~~lL~~~P~~Rps  262 (592)
T KOG0575|consen  192 KSGHSFEVDIWSLGCVMYTLL--VGRPPFETKTVKETYNKIKLNEYS------MP-SHLSAEAKDLIRKLLRPNPSERPS  262 (592)
T ss_pred             cCCCCCchhhhhhhhHHHhhh--hCCCCcccchHHHHHHHHHhcCcc------cc-cccCHHHHHHHHHHhcCCcccCCC
Confidence            888899999999999999999  788999999888888888754332      22 256789999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      +++|  |+||.+-
T Consensus       263 l~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  263 LDEVLDHPFFKSG  275 (592)
T ss_pred             HHHHhcCHhhhCC
Confidence            9999  8899543

>KOG0578|consensus

Probab=100.00  E-value=1.4e-33  Score=216.16  Aligned_cols=155  Identities=21%  Similarity=0.324  Sum_probs=133.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+|.+++.||.|||.+||+|||||.        +|||++.+|.+||+|||++..+.....  ......||+.|||||+.
T Consensus       372 A~Icre~l~aL~fLH~~gIiHrDIKS--------DnILL~~~g~vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVv  441 (550)
T KOG0578|consen  372 AAICREILQGLKFLHARGIIHRDIKS--------DNILLTMDGSVKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVV  441 (550)
T ss_pred             HHHHHHHHHHHHHHHhcceeeecccc--------ceeEeccCCcEEEeeeeeeeccccccC--ccccccCCCCccchhhh
Confidence            45678889999999999999999999        999999999999999999988866543  33567799999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      ....+..+.||||||+++.||.  .|..||...++....+.+...    +..........+.++++|+.+||+.|+++|+
T Consensus       442 trk~YG~KVDIWSLGIMaIEMv--eGEPPYlnE~PlrAlyLIa~n----g~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra  515 (550)
T KOG0578|consen  442 TRKPYGPKVDIWSLGIMAIEMV--EGEPPYLNENPLRALYLIATN----GTPKLKNPEKLSPELKDFLDRCLVVDVEQRA  515 (550)
T ss_pred             hhcccCccccchhhhhHHHHHh--cCCCCccCCChHHHHHHHhhc----CCCCcCCccccCHHHHHHHHHHhhcchhcCC
Confidence            9888999999999999999999  899999988877776666432    2333333467789999999999999999999


Q ss_pred             CHHHH--HHHHHh
Q psy4332         167 SFTEI--HLFLQR  177 (188)
Q Consensus       167 s~~el--~~~l~~  177 (188)
                      ++.|+  |+||+.
T Consensus       516 sA~eLL~HpFl~~  528 (550)
T KOG0578|consen  516 SAKELLEHPFLKM  528 (550)
T ss_pred             CHHHHhcChhhhh
Confidence            99999  888854

>KOG1026|consensus

Probab=99.98  E-value=1e-32  Score=219.93  Aligned_cols=162  Identities=43%  Similarity=0.716  Sum_probs=143.8

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .+.-.+|.|||+|..||-++.++||||-.        .|+|++++..+||+|||+++.+-...-|+..+....+.+||+|
T Consensus       603 ~q~L~iA~QIAaGM~YLs~~~FVHRDLAT--------RNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMpp  674 (774)
T KOG1026|consen  603 SQFLHIATQIAAGMEYLSSHHFVHRDLAT--------RNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPP  674 (774)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcccccchhh--------hhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCH
Confidence            34556899999999999999999999999        9999999999999999999988777667776677788999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.|..++|+.+|||||||++++|++| .|..||.+...++.++.+..+..      ..-...++.++.++|..||..+|+
T Consensus       675 EsIly~kFTteSDVWs~GVvLWEIFs-yG~QPy~glSn~EVIe~i~~g~l------L~~Pe~CP~~vY~LM~~CW~~~P~  747 (774)
T KOG1026|consen  675 ESILYGKFTTESDVWSFGVVLWEIFS-YGKQPYYGLSNQEVIECIRAGQL------LSCPENCPTEVYSLMLECWNENPK  747 (774)
T ss_pred             HHhhcCcccchhhhhhhhhhhhhhhc-cccCcccccchHHHHHHHHcCCc------ccCCCCCCHHHHHHHHHHhhcCcc
Confidence            99999999999999999999999999 57999999999999998875432      222367889999999999999999


Q ss_pred             CCCCHHHHHHHHHhccC
Q psy4332         164 ERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       164 ~Rps~~el~~~l~~~~~  180 (188)
                      +||+|+||+..|+....
T Consensus       748 ~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  748 RRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             cCCCHHHHHHHHHHHHh
Confidence            99999999999987643

>KOG0694|consensus

Probab=99.98  E-value=2.4e-32  Score=213.47  Aligned_cols=153  Identities=22%  Similarity=0.338  Sum_probs=132.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +-.|.+++.||.|||++||||||||.        +|||++..|.+||+|||+++...-.+  ...+..+||+-|+|||++
T Consensus       471 rfyaAev~l~L~fLH~~~IIYRDlKL--------dNiLLD~eGh~kiADFGlcKe~m~~g--~~TsTfCGTpey~aPEil  540 (694)
T KOG0694|consen  471 RFYAAEVVLGLQFLHENGIIYRDLKL--------DNLLLDTEGHVKIADFGLCKEGMGQG--DRTSTFCGTPEFLAPEVL  540 (694)
T ss_pred             HHHHHHHHHHHHHHHhcCceeeecch--------hheEEcccCcEEecccccccccCCCC--CccccccCChhhcChhhh
Confidence            45678899999999999999999999        99999999999999999998764222  366789999999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..|+..+|.|+||+++|||+  .|..||.+.+..++.+.+....       ...+.-++.+..++++++|..+|++|.
T Consensus       541 ~e~~Yt~aVDWW~lGVLlyeML--~Gq~PF~gddEee~FdsI~~d~-------~~yP~~ls~ea~~il~~ll~k~p~kRL  611 (694)
T KOG0694|consen  541 TEQSYTRAVDWWGLGVLLYEML--VGESPFPGDDEEEVFDSIVNDE-------VRYPRFLSKEAIAIMRRLLRKNPEKRL  611 (694)
T ss_pred             ccCcccchhhHHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHhcCC-------CCCCCcccHHHHHHHHHHhccCccccc
Confidence            9999999999999999999999  7889999999999999887432       222244678999999999999999999


Q ss_pred             CH-----HHH--HHHHHhc
Q psy4332         167 SF-----TEI--HLFLQRK  178 (188)
Q Consensus       167 s~-----~el--~~~l~~~  178 (188)
                      .+     ++|  |++|+.|
T Consensus       612 G~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  612 GSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             CCCCCCchhhhhCCccccC
Confidence            55     556  7888766

>KOG0198|consensus

Probab=99.97  E-value=6.6e-33  Score=204.99  Aligned_cols=157  Identities=23%  Similarity=0.371  Sum_probs=122.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCc-cccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ..+.+++.++.|+|++||+||||||        .|||++. ++.+||+|||+++...... .........||+.|||||+
T Consensus       121 ~ytr~iL~GL~ylHs~g~vH~DiK~--------~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEv  192 (313)
T KOG0198|consen  121 RYTRQILEGLAYLHSKGIVHCDIKP--------ANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEV  192 (313)
T ss_pred             HHHHHHHHHHHHHHhCCEeccCccc--------ceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchh
Confidence            4567899999999999999999999        9999999 7999999999988775311 1123446779999999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCC-CCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          86 VRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        86 ~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      +.++ ....++||||+||++.||+  +|..||.. .........+....    ..+ ..+...+++.++|+.+|+..||+
T Consensus       193 i~~g~~~~~~sDiWSlGCtVvEM~--Tg~~PW~~~~~~~~~~~~ig~~~----~~P-~ip~~ls~~a~~Fl~~C~~~~p~  265 (313)
T KOG0198|consen  193 IRNGEVARRESDIWSLGCTVVEML--TGKPPWSEFFEEAEALLLIGRED----SLP-EIPDSLSDEAKDFLRKCFKRDPE  265 (313)
T ss_pred             hcCCCcCCccchhhhcCCEEEecc--CCCCcchhhcchHHHHHHHhccC----CCC-CCCcccCHHHHHHHHHHhhcCcc
Confidence            9853 3345999999999999999  55889988 34344333333221    111 22345789999999999999999


Q ss_pred             CCCCHHHH--HHHHHhcc
Q psy4332         164 ERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~  179 (188)
                      +||||+++  |+++++..
T Consensus       266 ~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  266 KRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             cCcCHHHHhhChhhhccc
Confidence            99999999  77877543

>KOG0582|consensus

Probab=99.97  E-value=6.9e-32  Score=202.14  Aligned_cols=162  Identities=22%  Similarity=0.359  Sum_probs=128.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccc-c-CCCCCCccccchhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV-H-DNTSLPIRWMAWESV   86 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~-~~~~~~~~~~~Pe~~   86 (188)
                      +.++++.||.|||.+|.||||+|+        .|||++.+|.+||+|||.+..+.+.+.... . ....++++|||||++
T Consensus       131 iLre~LkaL~YLH~~G~IHRdvKA--------gnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl  202 (516)
T KOG0582|consen  131 ILREVLKALDYLHQNGHIHRDVKA--------GNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVL  202 (516)
T ss_pred             HHHHHHHHHHHHHhcCceeccccc--------ccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHh
Confidence            456788999999999999999999        999999999999999998777766553221 1 455789999999995


Q ss_pred             hc--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC---cccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 RL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE---FIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      ..  ..|..|+||||||+...|+.  .|..||...++.+..-.-.........   ........++..+++++..||+.|
T Consensus       203 ~q~~~GYdfKaDIwSfGITA~ELA--~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kD  280 (516)
T KOG0582|consen  203 MQQLHGYDFKADIWSFGITACELA--HGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKD  280 (516)
T ss_pred             hhcccCccchhhhhhhhHHHHHHh--cCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcC
Confidence            43  36899999999999999999  788999999988866554432211111   011112345678999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhccC
Q psy4332         162 PTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~~  180 (188)
                      |++|||++++  |.||++.+.
T Consensus       281 P~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  281 PSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             cccCCCHHHHhccHHHhhccc
Confidence            9999999999  889997754

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=1.5e-31  Score=200.74  Aligned_cols=162  Identities=43%  Similarity=0.835  Sum_probs=127.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++...............++..|+|||.+.
T Consensus       142 ~i~~~i~~al~~lH~~~ivH~dlkp--------~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         142 HVALQIASGMKYLSSLNFVHRDLAT--------RNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             HHHHHHHHHHHHHHHCCccccCcch--------hheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence            4678899999999999999999999        99999999999999999987664433323333444567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc-ccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF-IYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..++.++||||||+++|+++++.+..||.+....+............... .....+.++..+.+++.+||..||++||
T Consensus       214 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP  293 (304)
T cd05096         214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERP  293 (304)
T ss_pred             cCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCc
Confidence            888999999999999999999877888998877655554433211111111 1112245678999999999999999999


Q ss_pred             CHHHHHHHHHh
Q psy4332         167 SFTEIHLFLQR  177 (188)
Q Consensus       167 s~~el~~~l~~  177 (188)
                      |+.+++++|++
T Consensus       294 s~~~i~~~l~~  304 (304)
T cd05096         294 SFSDIHAFLTE  304 (304)
T ss_pred             CHHHHHHHHhC
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0583|consensus

Probab=99.97  E-value=7.9e-32  Score=205.70  Aligned_cols=151  Identities=20%  Similarity=0.273  Sum_probs=127.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ....|++.|+.|+|++||+||||||        +|+|++.+ +.+||+|||++....  .........+|++.|+|||++
T Consensus       124 ~~F~Qlisav~y~H~~gi~HRDLK~--------ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl  193 (370)
T KOG0583|consen  124 KYFRQLISAVAYCHSRGIVHRDLKP--------ENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVL  193 (370)
T ss_pred             HHHHHHHHHHHHHHhCCEeeCCCCH--------HHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHh
Confidence            4567899999999999999999999        99999999 999999999988773  111244678899999999999


Q ss_pred             hcCC-CC-ChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCC-hHHHHHHHHHHhccCCC
Q psy4332          87 RLRK-FT-TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKRSPT  163 (188)
Q Consensus        87 ~~~~-~~-~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~cl~~dp~  163 (188)
                      .+.. +. .++||||+|+++|.|+  +|..||.+.+...+...+.......       ...+ +.++.+++.+|+..||.
T Consensus       194 ~~~~~Y~g~~aDvWS~GViLy~ml--~G~~PF~d~~~~~l~~ki~~~~~~~-------p~~~~S~~~~~Li~~mL~~~P~  264 (370)
T KOG0583|consen  194 SGKGTYSGKAADVWSLGVILYVLL--CGRLPFDDSNVPNLYRKIRKGEFKI-------PSYLLSPEARSLIEKMLVPDPS  264 (370)
T ss_pred             CCCCCcCCchhhhhhhHHHHHHHH--hCCCCCCCccHHHHHHHHhcCCccC-------CCCcCCHHHHHHHHHHcCCCcc
Confidence            9866 64 6899999999999999  7889999988777777765432211       1233 88999999999999999


Q ss_pred             CCCCHHHH--HHHHHh
Q psy4332         164 ERPSFTEI--HLFLQR  177 (188)
Q Consensus       164 ~Rps~~el--~~~l~~  177 (188)
                      +|+++.++  |+||+.
T Consensus       265 ~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  265 TRITLLEILEHPWFQK  280 (370)
T ss_pred             cCCCHHHHhhChhhcc
Confidence            99999999  889997

>KOG0616|consensus

Probab=99.97  E-value=2.3e-32  Score=195.47  Aligned_cols=149  Identities=20%  Similarity=0.264  Sum_probs=130.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..|.+++.|+.|+|+++|++||+||        +|||++++|.+||+|||+++.+..     .....+||+-|+|||.+
T Consensus       147 rFYAAeivlAleylH~~~iiYRDLKP--------ENiLlD~~G~iKitDFGFAK~v~~-----rT~TlCGTPeYLAPEii  213 (355)
T KOG0616|consen  147 RFYAAEIVLALEYLHSLDIIYRDLKP--------ENLLLDQNGHIKITDFGFAKRVSG-----RTWTLCGTPEYLAPEII  213 (355)
T ss_pred             HHHHHHHHHHHHHHHhcCeeeccCCh--------HHeeeccCCcEEEEeccceEEecC-----cEEEecCCccccChHHh
Confidence            45688999999999999999999999        999999999999999999998754     24678899999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..+...+|.|+||+++|||+  .|..||.+..+..+.+++.....       ..++.++.++.+|+.++|+.|-.+|.
T Consensus       214 ~sk~ynkavDWWalGVLIYEMl--aG~pPF~~~~~~~iY~KI~~~~v-------~fP~~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  214 QSKGYNKAVDWWALGVLIYEML--AGYPPFYDDNPIQIYEKILEGKV-------KFPSYFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             hcCCCCcchhHHHHHHHHHHHH--cCCCCCcCCChHHHHHHHHhCcc-------cCCcccCHHHHHHHHHHHhhhhHhhh
Confidence            9999999999999999999999  88999999999999999876432       22356788999999999999999994


Q ss_pred             -----CHHHH--HHHHHh
Q psy4332         167 -----SFTEI--HLFLQR  177 (188)
Q Consensus       167 -----s~~el--~~~l~~  177 (188)
                           ...++  |+||+.
T Consensus       285 gnlknG~~dIk~H~wF~~  302 (355)
T KOG0616|consen  285 GNLKNGVEDIKNHPWFKG  302 (355)
T ss_pred             cCcCCCccccccCccccc
Confidence                 34566  777764

>KOG0591|consensus

Probab=99.97  E-value=6.6e-32  Score=192.24  Aligned_cols=142  Identities=23%  Similarity=0.349  Sum_probs=120.7

Q ss_pred             ccchhhhhhhhcc--cc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332          10 ASNLAVVPLLRNK--NG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus        10 ~~~~~~~~~~lh~--~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ..+++.|+.++|+  ..  |+||||||        .||+++.+|.+||+|||+++.+....  .-..+..|||.||+||.
T Consensus       130 f~QL~~AL~~cH~~~~r~~VmHRDIKP--------aNIFl~~~gvvKLGDfGL~r~l~s~~--tfA~S~VGTPyYMSPE~  199 (375)
T KOG0591|consen  130 FVQLCRALYHCHSKIPRGTVMHRDIKP--------ANIFLTANGVVKLGDFGLGRFLSSKT--TFAHSLVGTPYYMSPER  199 (375)
T ss_pred             HHHHHHHHHHHhccccccceeeccCcc--------hheEEcCCCceeeccchhHhHhcchh--HHHHhhcCCCcccCHHH
Confidence            3578899999998  56  99999999        99999999999999999998876543  22346679999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+.+++.|+||||+||++|||+  .-..||.+.+-.++-.++..+     .....+....+.++..++..|++.||+.|
T Consensus       200 i~~~~Y~~kSDiWslGCllyEMc--aL~~PF~g~n~~~L~~KI~qg-----d~~~~p~~~YS~~l~~li~~ci~vd~~~R  272 (375)
T KOG0591|consen  200 IHESGYNFKSDIWSLGCLLYEMC--ALQSPFYGDNLLSLCKKIEQG-----DYPPLPDEHYSTDLRELINMCIAVDPEQR  272 (375)
T ss_pred             HhcCCCCcchhHHHHHHHHHHHH--hcCCCcccccHHHHHHHHHcC-----CCCCCcHHHhhhHHHHHHHHHccCCcccC
Confidence            99999999999999999999999  557899999877777777543     33334556678999999999999999999


Q ss_pred             CCH
Q psy4332         166 PSF  168 (188)
Q Consensus       166 ps~  168 (188)
                      |+.
T Consensus       273 P~t  275 (375)
T KOG0591|consen  273 PDT  275 (375)
T ss_pred             CCc
Confidence            985

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=1.6e-31  Score=203.36  Aligned_cols=156  Identities=30%  Similarity=0.515  Sum_probs=121.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+||||||        .||+++.++.+||+|||+++...............++..|+|||.+.+
T Consensus       179 ~~~qi~~aL~~LH~~~ivHrDiKp--------~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  250 (338)
T cd05102         179 YSFQVARGMEFLASRKCIHRDLAA--------RNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD  250 (338)
T ss_pred             HHHHHHHHHHHHHHCCEECCCCcc--------ceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc
Confidence            467899999999999999999999        999999999999999999876543322222233445678999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ..++.++||||||+++|+++| .|..||.+....+ ....+...     .. .......+.++.+++.+||..||++||+
T Consensus       251 ~~~~~~sDiwslG~il~el~~-~g~~pf~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs  323 (338)
T cd05102         251 KVYTTQSDVWSFGVLLWEIFS-LGASPYPGVQINEEFCQRLKDG-----TR-MRAPENATPEIYRIMLACWQGDPKERPT  323 (338)
T ss_pred             CCCCcccCHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHhcC-----CC-CCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            889999999999999999995 3678888754322 22222211     11 1122456788999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++++.|+++-
T Consensus       324 ~~el~~~l~~~~  335 (338)
T cd05102         324 FSALVEILGDLL  335 (338)
T ss_pred             HHHHHHHHHHHH
Confidence            999999988763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0033|consensus

Probab=99.97  E-value=2.8e-31  Score=185.95  Aligned_cols=153  Identities=18%  Similarity=0.288  Sum_probs=130.9

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++|+.++.|+|.+||+|||+||        +|+++.+.   ..+||+|||++..++.+   .......||++||+||++
T Consensus       116 ~rQiLeal~yCH~n~IvHRDvkP--------~nllLASK~~~A~vKL~~FGvAi~l~~g---~~~~G~~GtP~fmaPEvv  184 (355)
T KOG0033|consen  116 IQQILEALAYCHSNGIVHRDLKP--------ENLLLASKAKGAAVKLADFGLAIEVNDG---EAWHGFAGTPGYLSPEVL  184 (355)
T ss_pred             HHHHHHHHHHHHhcCceeccCCh--------hheeeeeccCCCceeecccceEEEeCCc---cccccccCCCcccCHHHh
Confidence            46789999999999999999999        99988643   44899999999888733   355677899999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      ....++..+|||+-|+++|-++  .|..||.+.+...+.+++......   ...+..+..+++..+++++||..||++|.
T Consensus       185 rkdpy~kpvDiW~cGViLfiLL--~G~~PF~~~~~~rlye~I~~g~yd---~~~~~w~~is~~Ak~LvrrML~~dP~kRI  259 (355)
T KOG0033|consen  185 KKDPYSKPVDIWACGVILYILL--VGYPPFWDEDQHRLYEQIKAGAYD---YPSPEWDTVTPEAKSLIRRMLTVNPKKRI  259 (355)
T ss_pred             hcCCCCCcchhhhhhHHHHHHH--hCCCCCCCccHHHHHHHHhccccC---CCCcccCcCCHHHHHHHHHHhccChhhhc
Confidence            9899999999999999999999  678999999888999988765432   23334577889999999999999999999


Q ss_pred             CHHHH--HHHHHhc
Q psy4332         167 SFTEI--HLFLQRK  178 (188)
Q Consensus       167 s~~el--~~~l~~~  178 (188)
                      |+.|.  |+|+.+-
T Consensus       260 ta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  260 TADEALKHPWICNR  273 (355)
T ss_pred             cHHHHhCCchhcch
Confidence            99998  8888753

>KOG0599|consensus

Probab=99.97  E-value=5.5e-32  Score=192.26  Aligned_cols=159  Identities=21%  Similarity=0.284  Sum_probs=133.9

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .|.+.+++..++.|+|.+.|+|||+||        +|||++++.++||+|||+++....+...   ...+||++|+|||.
T Consensus       125 tR~iMrqlfegVeylHa~~IVHRDLKp--------ENILlddn~~i~isDFGFa~~l~~GekL---relCGTPgYLAPEt  193 (411)
T KOG0599|consen  125 TRRIMRQLFEGVEYLHARNIVHRDLKP--------ENILLDDNMNIKISDFGFACQLEPGEKL---RELCGTPGYLAPET  193 (411)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhcccCh--------hheeeccccceEEeccceeeccCCchhH---HHhcCCCcccChhh
Confidence            356778889999999999999999999        9999999999999999999998766533   35679999999999


Q ss_pred             hh------cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhc
Q psy4332          86 VR------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK  159 (188)
Q Consensus        86 ~~------~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  159 (188)
                      +.      +..++..+|+|+.|+++|.++  .|..||......-....+..+...   ...+.....+++..++|.+||+
T Consensus       194 ikC~m~e~~pGYs~EVD~Wa~GVImyTLL--aGcpPFwHRkQmlMLR~ImeGkyq---F~speWadis~~~KdLIsrlLq  268 (411)
T KOG0599|consen  194 IKCSMYENHPGYSKEVDEWACGVIMYTLL--AGCPPFWHRKQMLMLRMIMEGKYQ---FRSPEWADISATVKDLISRLLQ  268 (411)
T ss_pred             eeeecccCCCCccchhhHHHHHHHHHHHH--cCCCchhHHHHHHHHHHHHhcccc---cCCcchhhccccHHHHHHHHHe
Confidence            86      245788899999999999999  778999888777777777765432   2334446678899999999999


Q ss_pred             cCCCCCCCHHHH--HHHHHhccC
Q psy4332         160 RSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       160 ~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      .||.+|.|++|+  |+||.++-.
T Consensus       269 Vdp~~Ritake~LaHpff~q~~~  291 (411)
T KOG0599|consen  269 VDPTKRITAKEALAHPFFIQIAQ  291 (411)
T ss_pred             eCchhcccHHHHhcChHHHHHHH
Confidence            999999999999  899987643

>KOG0593|consensus

Probab=99.97  E-value=2.7e-31  Score=190.78  Aligned_cols=159  Identities=21%  Similarity=0.305  Sum_probs=124.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ....+++.|+.|+|+++++||||||        +|||++.++.+||||||+++....++.  ..+....|.+|.|||.+.
T Consensus       105 ~~l~Q~l~ai~~cHk~n~IHRDIKP--------ENILit~~gvvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLv  174 (396)
T KOG0593|consen  105 KYLYQLLKAIHFCHKNNCIHRDIKP--------ENILITQNGVVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLV  174 (396)
T ss_pred             HHHHHHHHHhhhhhhcCeecccCCh--------hheEEecCCcEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhc
Confidence            3456888999999999999999999        999999999999999999998874432  334445577899999999


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc-------------ccCC-----------
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF-------------IYLP-----------  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-----------  142 (188)
                      + -.+...+|||++||++.||+  .|..-|.+..+.++...+.........+             ...|           
T Consensus       175 GDtqYG~pVDiWAiGCv~aEl~--~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k  252 (396)
T KOG0593|consen  175 GDTQYGKPVDIWAIGCVFAELL--TGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERK  252 (396)
T ss_pred             ccCcCCCcccchhhhHHHHHHh--cCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhh
Confidence            7 46889999999999999999  6678888888777766654322211000             0011           


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      .+..+..+.+++.+||..||++|++++++  |++|+..
T Consensus       253 ~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  253 YPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             cccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence            23346678999999999999999999999  7777543

>KOG0585|consensus

Probab=99.97  E-value=1.5e-31  Score=201.70  Aligned_cols=158  Identities=22%  Similarity=0.335  Sum_probs=130.0

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc---cccccCCCCCCccccc
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD---YYRVHDNTSLPIRWMA   82 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~~~~~~   82 (188)
                      .|...++++.||.|||.+||+||||||        .|+|++++|++||+|||.+.....+.   .........||+.|+|
T Consensus       212 Ar~ylrDvv~GLEYLH~QgiiHRDIKP--------sNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~A  283 (576)
T KOG0585|consen  212 ARKYLRDVVLGLEYLHYQGIIHRDIKP--------SNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFA  283 (576)
T ss_pred             HHHHHHHHHHHHHHHHhcCeeccccch--------hheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccc
Confidence            355667889999999999999999999        99999999999999999987663321   1112345789999999


Q ss_pred             hhhhhcCC----CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          83 WESVRLRK----FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        83 Pe~~~~~~----~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      ||.+.++.    .+.+.|||++|+.+|.++  .|..||.+....++..++.+....     .+..+...+++.++|.+||
T Consensus       284 PE~c~~~~~~~~~g~a~DiWalGVTLYCll--fG~~PF~~~~~~~l~~KIvn~pL~-----fP~~pe~~e~~kDli~~lL  356 (576)
T KOG0585|consen  284 PELCSGGNSFSYSGFALDIWALGVTLYCLL--FGQLPFFDDFELELFDKIVNDPLE-----FPENPEINEDLKDLIKRLL  356 (576)
T ss_pred             hHhhcCCCCccccchhhhhhhhhhhHHHhh--hccCCcccchHHHHHHHHhcCccc-----CCCcccccHHHHHHHHHHh
Confidence            99998643    356899999999999999  789999999999999998864322     2223456789999999999


Q ss_pred             ccCCCCCCCHHHH--HHHHHhc
Q psy4332         159 KRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       159 ~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ++||+.|.+..+|  |+|..+-
T Consensus       357 ~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  357 EKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hcChhheeehhhheecceeccC
Confidence            9999999999999  8887654

>KOG0658|consensus

Probab=99.97  E-value=4.1e-31  Score=193.66  Aligned_cols=165  Identities=22%  Similarity=0.229  Sum_probs=132.8

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      +..+-..-||.+|+.|||+.||+||||||        .|+|++.+ |.+||||||+++....+.+.   .+-..+..|+|
T Consensus       125 ~~iKLYt~Qlfrgl~yLh~~~IcHRDIKP--------qNlLvD~~tg~LKicDFGSAK~L~~~epn---iSYicSRyYRa  193 (364)
T KOG0658|consen  125 LEIKLYTYQLFRGLAYLHSHGICHRDIKP--------QNLLVDPDTGVLKICDFGSAKVLVKGEPN---ISYICSRYYRA  193 (364)
T ss_pred             eeeHHHHHHHHHHHHHHHhcCcccCCCCh--------heEEEcCCCCeEEeccCCcceeeccCCCc---eeEEEeccccC
Confidence            33444567889999999999999999999        99999977 88999999999988655432   24446677999


Q ss_pred             hhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc---------------------
Q psy4332          83 WESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY---------------------  140 (188)
Q Consensus        83 Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------  140 (188)
                      ||.+.+. .++.+.||||.||++.||+  .|.+-|.|....++...+....+.+.....                     
T Consensus       194 PELifga~~Yt~~IDiWSaGCV~aELl--~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~  271 (364)
T KOG0658|consen  194 PELIFGATEYTTSIDIWSAGCVMAELL--KGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWH  271 (364)
T ss_pred             HHHHcCccccCceeEEhhhhHHHHHHh--cCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccce
Confidence            9999977 4899999999999999999  788899998877776666554444322110                     


Q ss_pred             -CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         141 -LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       141 -~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                       ......+.+..+|+.+++..+|.+|.++.|+  |++|++++..
T Consensus       272 ~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  272 KVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             eecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence             1234457899999999999999999999999  8999988765

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.97  E-value=2e-30  Score=192.63  Aligned_cols=155  Identities=39%  Similarity=0.723  Sum_probs=126.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++................+++.|+|||.+.
T Consensus       128 ~~~~~l~~al~~lH~~~i~H~dlkp--------~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05048         128 HIAIQIAAGMEYLSSHHFVHRDLAA--------RNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL  199 (283)
T ss_pred             HHHHHHHHHHHHHHhCCeecccccc--------ceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhc
Confidence            4678899999999999999999999        99999999999999999987664433323333445677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+....+....+.....      ......++.++.+++.+||+.||++||+
T Consensus       200 ~~~~~~~sDv~slG~il~el~~-~g~~p~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~  272 (283)
T cd05048         200 YGKFTTESDIWSFGVVLWEIFS-YGLQPYYGFSNQEVIEMIRSRQL------LPCPEDCPARVYALMIECWNEIPARRPR  272 (283)
T ss_pred             cCcCchhhhHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHcCCc------CCCcccCCHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999995 36789988877776665543211      1122456889999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +.++...|+.
T Consensus       273 ~~~i~~~l~~  282 (283)
T cd05048         273 FKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHhc
Confidence            9999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0660|consensus

Probab=99.97  E-value=9.4e-31  Score=191.48  Aligned_cols=165  Identities=21%  Similarity=0.191  Sum_probs=125.8

Q ss_pred             chhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc-CC
Q psy4332          12 NLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL-RK   90 (188)
Q Consensus        12 ~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~   90 (188)
                      |+++|+.|+|+.+++|||+||        .|++++.+...||+|||+++...........+....|.+|.|||.+.+ ..
T Consensus       133 QiLrgLKyiHSAnViHRDLKP--------sNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~  204 (359)
T KOG0660|consen  133 QILRGLKYIHSANVIHRDLKP--------SNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE  204 (359)
T ss_pred             HHHHhcchhhcccccccccch--------hheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccc
Confidence            688999999999999999999        999999999999999999988764311112233446788999999864 46


Q ss_pred             CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc------------------------ccCCCCCC
Q psy4332          91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF------------------------IYLPTPQT  146 (188)
Q Consensus        91 ~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~  146 (188)
                      ++...||||.||++.||++  |..-|.|.+...+...+.....++...                        .....+..
T Consensus       205 Yt~aiDiWSvGCI~AEmL~--gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a  282 (359)
T KOG0660|consen  205 YTKAIDIWSVGCILAEMLT--GKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNA  282 (359)
T ss_pred             ccchhhhhhhhHHHHHHHc--CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCC
Confidence            8999999999999999995  556666655444444443333222110                        01112455


Q ss_pred             hHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCCC
Q psy4332         147 TKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPM  186 (188)
Q Consensus       147 ~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~~  186 (188)
                      +++..+++.+||..||.+|+|++|+  |++|........+|.
T Consensus       283 ~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~  324 (359)
T KOG0660|consen  283 NPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPV  324 (359)
T ss_pred             CHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCC
Confidence            7889999999999999999999999  899999988776663

>KOG0201|consensus

Probab=99.97  E-value=8.5e-31  Score=195.80  Aligned_cols=152  Identities=22%  Similarity=0.319  Sum_probs=125.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      +.++++.|+.|+|.++.+|||+|+        .||++...|.+|++|||.+.........  .....||+.|||||++.+
T Consensus       116 ilre~l~~l~ylH~~~kiHrDIKa--------anil~s~~g~vkl~DfgVa~ql~~~~~r--r~tfvGTPfwMAPEVI~~  185 (467)
T KOG0201|consen  116 ILREVLKGLDYLHSEKKIHRDIKA--------ANILLSESGDVKLADFGVAGQLTNTVKR--RKTFVGTPFWMAPEVIKQ  185 (467)
T ss_pred             ehHHHHHHhhhhhhcceecccccc--------cceeEeccCcEEEEecceeeeeechhhc--cccccccccccchhhhcc
Confidence            356777899999999999999999        9999999999999999998877554322  256779999999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.|+||||||++.+||+  +|.+|+....+.....-+     ..... +.....++..+++|+..||++||+.||++
T Consensus       186 ~~Y~~KADIWSLGITaiEla--~GePP~s~~hPmrvlflI-----pk~~P-P~L~~~~S~~~kEFV~~CL~k~P~~RpsA  257 (467)
T KOG0201|consen  186 SGYDTKADIWSLGITAIELA--KGEPPHSKLHPMRVLFLI-----PKSAP-PRLDGDFSPPFKEFVEACLDKNPEFRPSA  257 (467)
T ss_pred             ccccchhhhhhhhHHHHHHh--cCCCCCcccCcceEEEec-----cCCCC-CccccccCHHHHHHHHHHhhcCcccCcCH
Confidence            89999999999999999999  788999998874433212     11222 22234778899999999999999999999


Q ss_pred             HHH--HHHHHhc
Q psy4332         169 TEI--HLFLQRK  178 (188)
Q Consensus       169 ~el--~~~l~~~  178 (188)
                      .++  |+|+++.
T Consensus       258 ~~LLKh~FIk~a  269 (467)
T KOG0201|consen  258 KELLKHKFIKRA  269 (467)
T ss_pred             HHHhhhHHHHhc
Confidence            999  8888863

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=2.2e-30  Score=196.95  Aligned_cols=168  Identities=21%  Similarity=0.216  Sum_probs=123.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++........ .......+++.|+|||++
T Consensus       107 ~i~~qi~~aL~~LH~~~ivH~dlkp--------~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  178 (338)
T cd07859         107 FFLYQLLRALKYIHTANVFHRDLKP--------KNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC  178 (338)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHH
Confidence            3567899999999999999999999        9999999999999999998765322211 122345678899999998


Q ss_pred             hc--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC------------------------CCCccc
Q psy4332          87 RL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD------------------------DGEFIY  140 (188)
Q Consensus        87 ~~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~------------------------~~~~~~  140 (188)
                      .+  ..++.++||||+|+++|+++  +|..||.+.........+......                        ......
T Consensus       179 ~~~~~~~~~~~DvwSlGvvl~el~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  256 (338)
T cd07859         179 GSFFSKYTPAIDIWSIGCIFAEVL--TGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFS  256 (338)
T ss_pred             hccccccCchhHHHHHHHHHHHHH--cCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchH
Confidence            65  56788999999999999999  567888766543322211110000                        000000


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCC
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP  185 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~  185 (188)
                      ...+..+.++.+++.+||+.||++||+++|+  |+||+.+......+
T Consensus       257 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~~  303 (338)
T cd07859         257 QKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREP  303 (338)
T ss_pred             HhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcccccc
Confidence            1113456788999999999999999999999  89999877655444

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=5.5e-30  Score=191.41  Aligned_cols=162  Identities=55%  Similarity=0.966  Sum_probs=126.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        .||+++.++.++++|||++................++..|++||.+.
T Consensus       134 ~~~~~i~~al~~LH~~~i~H~dlkp--------~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (296)
T cd05051         134 YMATQIASGMRYLESLNFVHRDLAT--------RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL  205 (296)
T ss_pred             HHHHHHHHHHHHHHHcCccccccch--------hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence            4567889999999999999999999        99999999999999999987654433222333445567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-cCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-YLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..++.++||||||+++|+++++.+..||......+................ .......+.++.+++.+||+.||++||
T Consensus       206 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  285 (296)
T cd05051         206 LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRP  285 (296)
T ss_pred             cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCC
Confidence            8788999999999999999998768889988776666555543211111111 112234578999999999999999999


Q ss_pred             CHHHHHHHHHh
Q psy4332         167 SFTEIHLFLQR  177 (188)
Q Consensus       167 s~~el~~~l~~  177 (188)
                      ++.+++++|++
T Consensus       286 t~~el~~~L~~  296 (296)
T cd05051         286 TFREIHLFLQR  296 (296)
T ss_pred             CHHHHHHHhcC
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0605|consensus

Probab=99.97  E-value=5.8e-31  Score=200.83  Aligned_cols=157  Identities=20%  Similarity=0.256  Sum_probs=129.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCC---------------------c
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS---------------------D   66 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~---------------------~   66 (188)
                      ....+++.|+..+|+.|+|||||||        +|+||+..|++||+|||++......                     .
T Consensus       245 fYiaE~vlAI~~iH~~gyIHRDIKP--------dNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~  316 (550)
T KOG0605|consen  245 FYIAETVLAIESIHQLGYIHRDIKP--------DNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPS  316 (550)
T ss_pred             HHHHHHHHHHHHHHHcCcccccCCh--------hheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCc
Confidence            3456778899999999999999999        9999999999999999998543210                     0


Q ss_pred             --c-----c-----------------cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH
Q psy4332          67 --Y-----Y-----------------RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL  122 (188)
Q Consensus        67 --~-----~-----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~  122 (188)
                        .     .                 .......|||-|+|||++.+.++...+|.||+||++||++  -|.+||.+.++.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmL--vGyPPF~s~tp~  394 (550)
T KOG0605|consen  317 DFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEML--VGYPPFCSETPQ  394 (550)
T ss_pred             cccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHH--hCCCCCCCCCHH
Confidence              0     0                 0012466899999999999999999999999999999999  678999999999


Q ss_pred             HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC---HHHH--HHHHHhc
Q psy4332         123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS---FTEI--HLFLQRK  178 (188)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~el--~~~l~~~  178 (188)
                      +...++.++.....   .+.....+.++++||.+|+. ||+.|..   ++||  |+||+.+
T Consensus       395 ~T~rkI~nwr~~l~---fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  395 ETYRKIVNWRETLK---FPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             HHHHHHHHHhhhcc---CCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence            99999988764332   33334557899999999998 9999985   8888  8999876

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=1.3e-30  Score=194.34  Aligned_cols=152  Identities=22%  Similarity=0.228  Sum_probs=118.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++......   .......+++.|+|||.+.
T Consensus       114 ~i~~qi~~aL~~lH~~~iiH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~  182 (290)
T cd07862         114 DMMFQLLRGLDFLHSHRVVHRDLKP--------QNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLL  182 (290)
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCH--------HHEEEcCCCCEEEccccceEeccCC---cccccccccccccChHHHh
Confidence            4577899999999999999999999        9999999999999999998765432   1223455788899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc--------------------CCCCCCh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY--------------------LPTPQTT  147 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~  147 (188)
                      +..++.++||||+|+++|+++  +|..||.+....+....+............                    ...+..+
T Consensus       183 ~~~~~~~~DiwslG~il~el~--~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (290)
T cd07862         183 QSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID  260 (290)
T ss_pred             CCCCCCccchHHHHHHHHHHH--cCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCC
Confidence            888899999999999999999  677899887766655555432111100000                    0013456


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ..+.+++.+||+.||++||++.|++
T Consensus       261 ~~~~~li~~~l~~~P~~R~s~~~~l  285 (290)
T cd07862         261 ELGKDLLLKCLTFNPAKRISAYSAL  285 (290)
T ss_pred             HHHHHHHHHHhccCchhcCCHHHHh
Confidence            7889999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=5.7e-30  Score=190.25  Aligned_cols=154  Identities=34%  Similarity=0.638  Sum_probs=124.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+|+||        .||+++.++.+||+|||+++...............+++.|+|||.+.+
T Consensus       129 ~~~ql~~aL~~lH~~gi~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05091         129 IVTQIAAGMEFLSSHHVVHKDLAT--------RNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY  200 (283)
T ss_pred             HHHHHHHHHHHHHHcCccccccch--------hheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc
Confidence            556899999999999999999999        999999999999999999876644332222334445678999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|++++|++|+ |..||.+....+..+.+......      .....++..+.+++.+||+.+|++||++
T Consensus       201 ~~~~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RP~~  273 (283)
T cd05091         201 GKFSIDSDIWSYGVVLWEVFSY-GLQPYCGYSNQDVIEMIRNRQVL------PCPDDCPAWVYTLMLECWNEFPSRRPRF  273 (283)
T ss_pred             CCCCcchhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCCcC------CCCCCCCHHHHHHHHHHhCCCcccCCCH
Confidence            8899999999999999999963 67899888777766666543211      1124577889999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      ++++..|+.
T Consensus       274 ~~i~~~l~~  282 (283)
T cd05091         274 KDIHSRLRT  282 (283)
T ss_pred             HHHHHHhhC
Confidence            999888764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0659|consensus

Probab=99.97  E-value=6.2e-30  Score=180.61  Aligned_cols=157  Identities=20%  Similarity=0.250  Sum_probs=127.3

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC-
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR-   89 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-   89 (188)
                      ..++.|+.|+|++.|+|||+||        .|+|++++|.+||+|||+++.+...+.  .......|.+|.|||.+.|. 
T Consensus       108 ~m~LkGl~y~H~~~IlHRDlKP--------nNLLis~~g~lKiADFGLAr~f~~p~~--~~~~~V~TRWYRAPELLfGsr  177 (318)
T KOG0659|consen  108 LMTLKGLAYCHSKWILHRDLKP--------NNLLISSDGQLKIADFGLARFFGSPNR--IQTHQVVTRWYRAPELLFGSR  177 (318)
T ss_pred             HHHHHHHHHHHhhhhhcccCCc--------cceEEcCCCcEEeecccchhccCCCCc--ccccceeeeeccChHHhccch
Confidence            4567899999999999999999        999999999999999999998876653  22333567889999999875 


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCC---------------------CCCChH
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP---------------------TPQTTK  148 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~  148 (188)
                      .+....|+||.||++.|++  .+.+-|.+.++.++...+.....++.....+.                     .+..+.
T Consensus       178 ~Yg~~VDmWavGCI~AELl--lr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~  255 (318)
T KOG0659|consen  178 QYGTGVDMWAVGCIFAELL--LRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASS  255 (318)
T ss_pred             hcCCcchhhhHHHHHHHHH--ccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccH
Confidence            4899999999999999999  77677788888888877766544443322111                     133467


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         149 DILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       149 ~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      +..+++.+|+..||.+|++++|+  |++|++.-
T Consensus       256 d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  256 DALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             HHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence            78999999999999999999999  88998643

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=2.7e-30  Score=202.81  Aligned_cols=159  Identities=18%  Similarity=0.243  Sum_probs=121.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ++.+|+.|+.|||++||+||||||        +||+++.++ .+||+|||+++......   ......+++.|+|||++.
T Consensus       175 ~~~qi~~gL~yLH~~~IiHrDLKp--------~NILl~~~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~  243 (440)
T PTZ00036        175 YSYQLCRALAYIHSKFICHRDLKP--------QNLLIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELML  243 (440)
T ss_pred             HHHHHHHHHHHHHHCCEecCCcCH--------HHEEEcCCCCceeeeccccchhccCCC---CcccCCCCcCccCHHHhc
Confidence            456899999999999999999999        999998664 69999999988664332   122345688899999987


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC----------------------cccCCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE----------------------FIYLPTP  144 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~  144 (188)
                      +. .++.++||||+||++|+|+  +|..||.+....+...++......+..                      .......
T Consensus       244 ~~~~~~~~~DiwSlGvil~ell--tG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~  321 (440)
T PTZ00036        244 GATNYTTHIDLWSLGCIIAEMI--LGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPK  321 (440)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhcc
Confidence            54 5889999999999999999  567899887665554444322111100                      0000112


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ..+.++.+|+.+||..||++|||+.|+  |+||+++..
T Consensus       322 ~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        322 GTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             CCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence            356789999999999999999999999  899998754

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=1.4e-30  Score=193.85  Aligned_cols=156  Identities=18%  Similarity=0.233  Sum_probs=120.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++||+|+||||        +||+++.++.++|+|||++.......   ......++..|+|||++.
T Consensus       106 ~~~~qi~~~l~~lH~~~iiH~dikp--------~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~  174 (285)
T cd05631         106 FYAAELCCGLEDLQRERIVYRDLKP--------ENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVIN  174 (285)
T ss_pred             HHHHHHHHHHHHHHhCCEEeCCCCH--------HHEEECCCCCEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhc
Confidence            3467889999999999999999999        99999999999999999987653322   123445788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  .|..||.+.........+.....   .........++.++.+++.+||..||++||+
T Consensus       175 ~~~~~~~~DvwslGvil~el~--~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05631         175 NEKYTFSPDWWGLGCLIYEMI--QGQSPFRKRKERVKREEVDRRVK---EDQEEYSEKFSEDAKSICRMLLTKNPKERLG  249 (285)
T ss_pred             CCCCCcccCchhHHHHHHHHH--hCCCCCCCCCcchhHHHHHHHhh---cccccCCccCCHHHHHHHHHHhhcCHHHhcC
Confidence            888999999999999999999  56789987654322222221111   0111123456889999999999999999997


Q ss_pred             -----HHHH--HHHHHhcc
Q psy4332         168 -----FTEI--HLFLQRKN  179 (188)
Q Consensus       168 -----~~el--~~~l~~~~  179 (188)
                           ++++  |+||++++
T Consensus       250 ~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         250 CRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             CCCCCHHHHhcCHhhcCCC
Confidence                 7888  78888663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4e-30  Score=199.03  Aligned_cols=169  Identities=16%  Similarity=0.144  Sum_probs=122.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||++........ .......||+.|+|||++.
T Consensus       186 ~i~~qi~~aL~ylH~~~IvHrDiKP--------~NIll~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~  256 (391)
T PHA03212        186 AIERSVLRAIQYLHENRIIHRDIKA--------ENIFINHPGDVCLGDFGAACFPVDINA-NKYYGWAGTIATNAPELLA  256 (391)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCh--------HhEEEcCCCCEEEEeCCcccccccccc-cccccccCccCCCChhhhc
Confidence            4567889999999999999999999        999999999999999999865432211 1223456889999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-------HHHHHHHhhcccCC--------------------------
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-------DLEVLENISHLHAD--------------------------  134 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-------~~~~~~~~~~~~~~--------------------------  134 (188)
                      +..++.++||||+|+++|+++|  |..||.+..       .......+......                          
T Consensus       257 ~~~~~~~~DiwSlGvil~ellt--g~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  334 (391)
T PHA03212        257 RDPYGPAVDIWSAGIVLFEMAT--CHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSR  334 (391)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHH--CCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCC
Confidence            8889999999999999999995  444543211       11111111110000                          


Q ss_pred             -CCCcc-cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCCCC
Q psy4332         135 -DGEFI-YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPMN  187 (188)
Q Consensus       135 -~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~~~  187 (188)
                       ..... .......+.++.+++.+||..||++|||++|+  |+||+++...+.+|++
T Consensus       335 ~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~~~~~~  391 (391)
T PHA03212        335 KPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPYPNPME  391 (391)
T ss_pred             CCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCCCCCCC
Confidence             00000 00011235678999999999999999999999  8999999988888874

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.97  E-value=1.1e-29  Score=189.53  Aligned_cols=159  Identities=40%  Similarity=0.684  Sum_probs=127.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+|+.++.|+|++||+|+|+||        .||+++.++.++|+|||++................++..|++||.+
T Consensus       126 ~~i~~~i~~al~~lH~~~i~H~dlkp--------~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~  197 (291)
T cd05094         126 LHIASQIASGMVYLASQHFVHRDLAT--------RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI  197 (291)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecccCc--------ceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHh
Confidence            34667899999999999999999999        9999999999999999998766443332333444567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++|+++| .|..||......+..+.+.....      .......+..+.+++.+||..+|++||
T Consensus       198 ~~~~~~~~~Di~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~Rp  270 (291)
T cd05094         198 MYRKFTTESDVWSFGVILWEIFT-YGKQPWFQLSNTEVIECITQGRV------LERPRVCPKEVYDIMLGCWQREPQQRL  270 (291)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHhCCCC------CCCCccCCHHHHHHHHHHcccChhhCc
Confidence            88888999999999999999995 26789888776665554432211      111234578999999999999999999


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      ++.++.+.|+++..
T Consensus       271 t~~~v~~~l~~~~~  284 (291)
T cd05094         271 NIKEIYKILHALGK  284 (291)
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999998855

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=9.4e-30  Score=189.66  Aligned_cols=158  Identities=41%  Similarity=0.707  Sum_probs=126.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++|+|||++................++..|+|||.+.
T Consensus       124 ~~~~ql~~aL~~lH~~~i~H~dlkp--------~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  195 (288)
T cd05093         124 HIAQQIAAGMVYLASQHFVHRDLAT--------RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  195 (288)
T ss_pred             HHHHHHHHHHHHHHhCCeeecccCc--------ceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhc
Confidence            3567899999999999999999999        99999999999999999987664332222223344567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||||+++++++| .|..||......+....+.....      .......+.++.+++.+||+.+|.+||+
T Consensus       196 ~~~~~~~sDiwslG~il~~l~t-~g~~p~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt  268 (288)
T cd05093         196 YRKFTTESDVWSLGVVLWEIFT-YGKQPWYQLSNNEVIECITQGRV------LQRPRTCPKEVYDLMLGCWQREPHMRLN  268 (288)
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            8888999999999999999995 26789988776666665543221      1112346789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +++++..|+++..
T Consensus       269 ~~~v~~~l~~~~~  281 (288)
T cd05093         269 IKEIHSLLQNLAK  281 (288)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0661|consensus

Probab=99.97  E-value=2.1e-30  Score=195.44  Aligned_cols=158  Identities=20%  Similarity=0.310  Sum_probs=129.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.+..||+.||.|.|++|+.|||+||        +|||+..+..+||+|||+++.+....++.   ....|.+|+|||++
T Consensus       113 rnim~QilqGL~hiHk~GfFHRDlKP--------ENiLi~~~~~iKiaDFGLARev~SkpPYT---eYVSTRWYRAPEvL  181 (538)
T KOG0661|consen  113 RNIMYQILQGLAHIHKHGFFHRDLKP--------ENILISGNDVIKIADFGLAREVRSKPPYT---EYVSTRWYRAPEVL  181 (538)
T ss_pred             HHHHHHHHHHHHHHHhcCcccccCCh--------hheEecccceeEecccccccccccCCCcc---hhhhcccccchHHh
Confidence            34567899999999999999999999        99999988899999999999887665443   34456789999998


Q ss_pred             h-cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCC-----------------------
Q psy4332          87 R-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP-----------------------  142 (188)
Q Consensus        87 ~-~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------  142 (188)
                      . ++-++.+.|+|++||+++|+++.  ..-|.|..+.+.+.++....+++.......                       
T Consensus       182 Lrs~~Ys~pvD~wA~GcI~aEl~sL--rPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L  259 (538)
T KOG0661|consen  182 LRSGYYSSPVDMWAVGCIMAELYSL--RPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDL  259 (538)
T ss_pred             hhccccCCchHHHHHHHHHHHHHHh--cccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHh
Confidence            6 45689999999999999999954  567888888888888876665554322211                       


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHh
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~  177 (188)
                      .+..+.++.+++.+|+..||++|||+.++  |++|+.
T Consensus       260 ~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~  296 (538)
T KOG0661|consen  260 LPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQV  296 (538)
T ss_pred             CcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence            23467899999999999999999999999  677774

>KOG0597|consensus

Probab=99.97  E-value=1.3e-30  Score=200.53  Aligned_cols=152  Identities=22%  Similarity=0.359  Sum_probs=132.3

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+++.|+.|||+++|.|||+||        .|||++.++.+|+||||+++.+...  +.+.....||+.|||||+.
T Consensus       103 ~~~a~~LVsaL~yLhs~rilhrd~kP--------qniLl~~~~~~KlcdFg~Ar~m~~~--t~vltsikGtPlYmAPElv  172 (808)
T KOG0597|consen  103 RAIAYDLVSALYYLHSNRILHRDMKP--------QNILLEKGGTLKLCDFGLARAMSTN--TSVLTSIKGTPLYMAPELV  172 (808)
T ss_pred             HHHHHHHHHHHHHHHhcCcccccCCc--------ceeeecCCCceeechhhhhhhcccC--ceeeeeccCcccccCHHHH
Confidence            45678899999999999999999999        9999999999999999999988653  3566788999999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .++.++..+|.||+||++||++  .|.+||....-.++...+....       ..+....+..+.+|+...|.+||.+|.
T Consensus       173 ~e~pyd~~sDlWslGcilYE~~--~G~PPF~a~si~~Lv~~I~~d~-------v~~p~~~S~~f~nfl~gLL~kdP~~Rl  243 (808)
T KOG0597|consen  173 EEQPYDHTSDLWSLGCILYELY--VGQPPFYARSITQLVKSILKDP-------VKPPSTASSSFVNFLQGLLIKDPAQRL  243 (808)
T ss_pred             cCCCccchhhHHHHHHHHHHHh--cCCCCchHHHHHHHHHHHhcCC-------CCCcccccHHHHHHHHHHhhcChhhcc
Confidence            9999999999999999999999  6789999877667776665321       223347788999999999999999999


Q ss_pred             CHHHH--HHHHHh
Q psy4332         167 SFTEI--HLFLQR  177 (188)
Q Consensus       167 s~~el--~~~l~~  177 (188)
                      ++.++  |+|.+.
T Consensus       244 tW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  244 TWTDLLGHPFWKG  256 (808)
T ss_pred             cHHHHhcChHHhh
Confidence            99999  787764

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.3e-29  Score=189.45  Aligned_cols=161  Identities=42%  Similarity=0.836  Sum_probs=124.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++|++|+|+||        .||+++.++.+||+|||++................++..|+|||.+.+
T Consensus       134 i~~~i~~al~~lH~~~i~H~dlkp--------~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  205 (295)
T cd05097         134 MAVQIASGMKYLASLNFVHRDLAT--------RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL  205 (295)
T ss_pred             HHHHHHHHHHHHHhcCeeccccCh--------hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc
Confidence            567899999999999999999999        999999999999999999876543332222333445678999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-cccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-FIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ..++.++|+||||+++++++++.+..||......+....+......... ......+..+..+.+++.+||+.+|++||+
T Consensus       206 ~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs  285 (295)
T cd05097         206 GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT  285 (295)
T ss_pred             CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            8899999999999999999987788899887665554443221111111 111123346789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      ++++++.|++
T Consensus       286 ~~~i~~~l~~  295 (295)
T cd05097         286 FNKIHHFLRE  295 (295)
T ss_pred             HHHHHHHHhC
Confidence            9999998864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.96  E-value=2e-29  Score=186.24  Aligned_cols=156  Identities=30%  Similarity=0.652  Sum_probs=123.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        +||+++.++.++|+|||+++................+..|++||...
T Consensus       116 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  187 (272)
T cd05075         116 KFMTDIASGMEYLSSKSFIHRDLAA--------RNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLA  187 (272)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccch--------hheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHcc
Confidence            3456788999999999999999999        99999999999999999988765433222223334566799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++++ +..||.+....+....+.....      .......+..+.+++.+||+.+|++||+
T Consensus       188 ~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps  260 (272)
T cd05075         188 DRVYTTKSDVWSFGVTMWEIATR-GQTPYPGVENSEIYDYLRQGNR------LKQPPDCLDGLYSLMSSCWLLNPKDRPS  260 (272)
T ss_pred             CCCcChHHHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            88889999999999999999952 5789988776666555543211      1122456788999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       261 ~~~l~~~l~~~  271 (272)
T cd05075         261 FETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHhh
Confidence            99998888753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.96  E-value=1.3e-30  Score=197.25  Aligned_cols=151  Identities=19%  Similarity=0.245  Sum_probs=122.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++.....+  .......|++.|+|||.+.+
T Consensus       100 ~~~qi~~~L~~lH~~~ivHrDlkp--------~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~  169 (323)
T cd05571         100 YGAEIVSALGYLHSCDVVYRDLKL--------ENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLED  169 (323)
T ss_pred             HHHHHHHHHHHHHhCCeEeCCCCH--------HHEEECCCCCEEEeeCCCCcccccCC--CcccceecCccccChhhhcC
Confidence            467899999999999999999999        99999999999999999987543222  12234457889999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++||||+||++|+++  +|..||.+.........+.....       ......+.++.+++.+||+.||++||  
T Consensus       170 ~~~~~~~DiwSlG~il~ell--tg~~Pf~~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~  240 (323)
T cd05571         170 NDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHEKLFELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLGG  240 (323)
T ss_pred             CCCCccccCcccchhhhhhh--cCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence            88999999999999999999  67889988776666555543211       11245678999999999999999999  


Q ss_pred             ---CHHHH--HHHHHhc
Q psy4332         167 ---SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ---s~~el--~~~l~~~  178 (188)
                         ++.++  |+||+.+
T Consensus       241 ~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         241 GPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCHHHHHcCCCcCCC
Confidence               79998  7777653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=7.4e-30  Score=196.68  Aligned_cols=157  Identities=30%  Similarity=0.524  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        .||+++.++.+||+|||++................++..|+|||++.
T Consensus       216 ~i~~qi~~aL~yLH~~giiHrDLkp--------~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  287 (374)
T cd05106         216 RFSSQVAQGMDFLASKNCIHRDVAA--------RNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF  287 (374)
T ss_pred             HHHHHHHHHHHHHHHCCEEeccCch--------heEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhc
Confidence            4578899999999999999999999        99999999999999999987654433222222333456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .|..||.................    . .......+.++.+++.+||+.||++||+
T Consensus       288 ~~~~~~~~DvwSlGvil~ellt-~G~~Pf~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~l~~li~~cl~~dp~~RPs  361 (374)
T cd05106         288 DCVYTVQSDVWSYGILLWEIFS-LGKSPYPGILVNSKFYKMVKRGY----Q-MSRPDFAPPEIYSIMKMCWNLEPTERPT  361 (374)
T ss_pred             CCCCCccccHHHHHHHHHHHHh-CCCCCCccccccHHHHHHHHccc----C-ccCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            8889999999999999999995 26788877654333322222111    1 1111234789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++.+.|+++
T Consensus       362 ~~~l~~~l~~~  372 (374)
T cd05106         362 FSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHHHHHH
Confidence            99999998875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=1.2e-29  Score=188.87  Aligned_cols=153  Identities=20%  Similarity=0.289  Sum_probs=123.2

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+ .+++|+|+||        .||+++.++.+|++|||+++......     ....++..|+|||.+
T Consensus       126 ~i~~~i~~~l~~lH~~~~~~Hrdlkp--------~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~  192 (283)
T PHA02988        126 DMAIDCCKGLYNLYKYTNKPYKNLTS--------VSFLVTENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKML  192 (283)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCcCCh--------hhEEECCCCcEEEcccchHhhhcccc-----ccccCcccccCHHHh
Confidence            456788999999997 5999999999        99999999999999999987654321     234467789999999


Q ss_pred             hc--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          87 RL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        87 ~~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+  ..++.++||||||+++||++  +|..||.+....+....+......    .. .....+.++.+++.+||+.||++
T Consensus       193 ~~~~~~~~~k~Di~SlGvil~el~--~g~~Pf~~~~~~~~~~~i~~~~~~----~~-~~~~~~~~l~~li~~cl~~dp~~  265 (283)
T PHA02988        193 NDIFSEYTIKDDIYSLGVVLWEIF--TGKIPFENLTTKEIYDLIINKNNS----LK-LPLDCPLEIKCIVEACTSHDSIK  265 (283)
T ss_pred             hhccccccchhhhhHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhcCCC----CC-CCCcCcHHHHHHHHHHhcCCccc
Confidence            75  57899999999999999999  568899988777766655432211    11 11356789999999999999999


Q ss_pred             CCCHHHHHHHHHhccC
Q psy4332         165 RPSFTEIHLFLQRKNL  180 (188)
Q Consensus       165 Rps~~el~~~l~~~~~  180 (188)
                      |||+++++..|++...
T Consensus       266 Rps~~ell~~l~~~~~  281 (283)
T PHA02988        266 RPNIKEILYNLSLYKF  281 (283)
T ss_pred             CcCHHHHHHHHHHHHh
Confidence            9999999988887643

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.96  E-value=1.3e-29  Score=194.68  Aligned_cols=158  Identities=16%  Similarity=0.147  Sum_probs=120.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++......   ......++..|+|||++.
T Consensus       130 ~~~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~  198 (364)
T cd07875         130 YLLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVIL  198 (364)
T ss_pred             HHHHHHHHHHHHHhhCCeecCCCCH--------HHEEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHh
Confidence            3567889999999999999999999        99999999999999999987654321   223445788899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC--------------------c---------
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE--------------------F---------  138 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~---------  138 (188)
                      +..++.++||||+|+++|+++  +|..||.+.+..+....+......+..                    .         
T Consensus       199 ~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (364)
T cd07875         199 GMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP  276 (364)
T ss_pred             CCCCCchhhHHhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCc
Confidence            888999999999999999999  567899877665554444321111000                    0         


Q ss_pred             ------ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         139 ------IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       139 ------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                            ........+.++.+++.+||..||++|||+.++  |+||+..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         277 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             cccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                  000011124578999999999999999999999  7888754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0594|consensus

Probab=99.96  E-value=7.2e-30  Score=186.77  Aligned_cols=161  Identities=20%  Similarity=0.279  Sum_probs=129.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ....||+.|+.|+|+++|+||||||        .|++++..|.+||+|||+++....+.  +.......|..|.|||++.
T Consensus       124 ~~m~Qll~gl~~~H~~~IlHRDLKP--------QNlLi~~~G~lKlaDFGlAra~~ip~--~~yt~evvTlWYRaPEvLl  193 (323)
T KOG0594|consen  124 SFMRQLLRGLAFLHSHGILHRDLKP--------QNLLISSSGVLKLADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLL  193 (323)
T ss_pred             HHHHHHHHHHHHHHhCCeecccCCc--------ceEEECCCCcEeeeccchHHHhcCCc--ccccccEEEeeccCHHHhc
Confidence            4567899999999999999999999        99999999999999999998665333  3456777889999999999


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCC-----------------------C
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP-----------------------T  143 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~  143 (188)
                      +. .++...||||+||+++||+  .+..-|.+..+.++..++.....++.....+.                       .
T Consensus       194 Gs~~Ys~~vDiWs~GcIfaEm~--~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~  271 (323)
T KOG0594|consen  194 GSTSYSTSVDIWSLGCIFAEMF--TRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSIL  271 (323)
T ss_pred             CCCcCCCCcchHhHHHHHHHHH--hCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhc
Confidence            77 5899999999999999999  56777888887777777765544443221110                       0


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      +....+..+++.+|++.+|++|.|++.+  |++|+++..
T Consensus       272 ~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  272 PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             cccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence            1123578999999999999999999998  788987744

>KOG0588|consensus

Probab=99.96  E-value=3.9e-30  Score=200.65  Aligned_cols=150  Identities=25%  Similarity=0.303  Sum_probs=129.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ..++|+.|+.|+|+-+|+|||+||        +|+|++..+.+||+|||.+.....+   ......+|+++|+|||.+.|
T Consensus       117 ff~QIi~gv~yCH~~~icHRDLKp--------ENlLLd~~~nIKIADFGMAsLe~~g---klLeTSCGSPHYA~PEIV~G  185 (786)
T KOG0588|consen  117 FFRQILDGVSYCHAFNICHRDLKP--------ENLLLDVKNNIKIADFGMASLEVPG---KLLETSCGSPHYAAPEIVSG  185 (786)
T ss_pred             HHHHHHHHHHHHhhhcceeccCCc--------hhhhhhcccCEeeeccceeecccCC---ccccccCCCcccCCchhhcC
Confidence            346889999999999999999999        9999999999999999998765443   24567889999999999998


Q ss_pred             CCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      .+| ..++||||.|+++|.++  .|..||.+.+-..+..++..+..      .+| ..++.++++|+++|++.||++|.|
T Consensus       186 ~pYdG~~sDVWSCGVILfALL--tG~LPFdDdNir~LLlKV~~G~f------~MP-s~Is~eaQdLLr~ml~VDp~~RiT  256 (786)
T KOG0588|consen  186 RPYDGRPSDVWSCGVILFALL--TGKLPFDDDNIRVLLLKVQRGVF------EMP-SNISSEAQDLLRRMLDVDPSTRIT  256 (786)
T ss_pred             CCCCCCccccchhHHHHHHHH--hCCCCCCCccHHHHHHHHHcCcc------cCC-CcCCHHHHHHHHHHhccCcccccc
Confidence            886 67899999999999999  67899999888888888875432      222 667899999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      .+||  |+|+..-
T Consensus       257 ~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  257 TEEILKHPFLSGY  269 (786)
T ss_pred             HHHHhhCchhhcC
Confidence            9999  8898754

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1.1e-29  Score=201.73  Aligned_cols=152  Identities=19%  Similarity=0.249  Sum_probs=122.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+||||||        +||+++.++.+||+|||+++...............||+.|+|||.+.+
T Consensus       148 i~~qll~aL~~lH~~~IiHrDLKP--------~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  219 (496)
T PTZ00283        148 LFIQVLLAVHHVHSKHMIHRDIKS--------ANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR  219 (496)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCH--------HHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCC
Confidence            456889999999999999999999        999999999999999999876543322222334568899999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+.....      .......+.++.+++.+||..||++||++
T Consensus       220 ~~~s~k~DVwSlGvilyeLl--tG~~Pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~L~~dP~~RPs~  291 (496)
T PTZ00283        220 KPYSKKADMFSLGVLLYELL--TLKRPFDGENMEEVMHKTLAGRY------DPLPPSISPEMQEIVTALLSSDPKRRPSS  291 (496)
T ss_pred             CCCCcHHHHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHcccChhhCcCH
Confidence            88999999999999999999  56789988877666665543221      11224567899999999999999999999


Q ss_pred             HHH--HHHHH
Q psy4332         169 TEI--HLFLQ  176 (188)
Q Consensus       169 ~el--~~~l~  176 (188)
                      .++  +++++
T Consensus       292 ~ell~~p~~~  301 (496)
T PTZ00283        292 SKLLNMPICK  301 (496)
T ss_pred             HHHHhCHHHH
Confidence            998  44443

>KOG4721|consensus

Probab=99.96  E-value=1.5e-30  Score=200.52  Aligned_cols=148  Identities=28%  Similarity=0.478  Sum_probs=123.2

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      ..+||.+..|||.+.|||||||.        .|||++.+..+||+|||.++...+.   .....+.||..|||||+|.+.
T Consensus       218 sk~IA~GM~YLH~hKIIHRDLKS--------PNiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrne  286 (904)
T KOG4721|consen  218 SKGIAGGMNYLHLHKIIHRDLKS--------PNILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNE  286 (904)
T ss_pred             HHHhhhhhHHHHHhhHhhhccCC--------CceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcC
Confidence            46789999999999999999999        9999999999999999998876544   355678899999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHH
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFT  169 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  169 (188)
                      ..+.|+||||||+++|||+  ++..||.+.+...++    ++. +..-...+....+++.+.-|+..||..+|..||+|.
T Consensus       287 PcsEKVDIwSfGVVLWEmL--T~EiPYkdVdssAII----wGV-GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFr  359 (904)
T KOG4721|consen  287 PCSEKVDIWSFGVVLWEML--TGEIPYKDVDSSAII----WGV-GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFR  359 (904)
T ss_pred             CcccccceehhHHHHHHHH--hcCCCccccchheeE----Eec-cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHH
Confidence            9999999999999999999  678999987654433    221 222223334467788999999999999999999999


Q ss_pred             HHHHHH
Q psy4332         170 EIHLFL  175 (188)
Q Consensus       170 el~~~l  175 (188)
                      +++..|
T Consensus       360 qil~Hl  365 (904)
T KOG4721|consen  360 QILLHL  365 (904)
T ss_pred             HHHHHH
Confidence            995443

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.96  E-value=1.6e-29  Score=193.86  Aligned_cols=156  Identities=17%  Similarity=0.217  Sum_probs=118.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||++.......   ......++..|+|||.+.+
T Consensus       128 ~~~qi~~~L~~LH~~~ivHrDlkp--------~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~  196 (359)
T cd07876         128 LLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILG  196 (359)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCH--------HHEEECCCCCEEEecCCCccccccCc---cCCCCcccCCCCCchhccC
Confidence            567899999999999999999999        99999999999999999987543221   2234457888999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC-------------------Ccc----------
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG-------------------EFI----------  139 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~~----------  139 (188)
                      ..++.++||||+|+++|+++  +|..||.+.+....+..+........                   ...          
T Consensus       197 ~~~~~~~DiwSlG~il~el~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (359)
T cd07876         197 MGYKENVDIWSVGCIMGELV--KGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPD  274 (359)
T ss_pred             CCCCcchhhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccc
Confidence            88999999999999999999  56789987664433322221110000                   000          


Q ss_pred             ------cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHh
Q psy4332         140 ------YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       140 ------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~  177 (188)
                            .......+.++.+++.+||..||++|||+.|+  |+|++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         275 WIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             cccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                  00011235678999999999999999999999  788875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.96  E-value=3.1e-29  Score=186.00  Aligned_cols=160  Identities=29%  Similarity=0.466  Sum_probs=124.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|+++|+|+||||        +||+++.++.+||+|||+++...............++..|++||.+.
T Consensus       113 ~~~~qi~~~L~~lH~~~iiH~dlkp--------~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05109         113 NWCVQIAKGMSYLEEVRLVHRDLAA--------RNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL  184 (279)
T ss_pred             HHHHHHHHHHHHHHHCCeecccccc--------ceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhc
Confidence            3577899999999999999999999        99999999999999999987664322211122233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++||++| .+..||...........+....     . .......+.++.+++.+||..||+.||+
T Consensus       185 ~~~~~~~~Di~slG~~l~el~t-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~  257 (279)
T cd05109         185 HRRFTHQSDVWSYGVTVWELMT-FGAKPYDGIPAREIPDLLEKGE-----R-LPQPPICTIDVYMIMVKCWMIDSECRPR  257 (279)
T ss_pred             cCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHCCC-----c-CCCCccCCHHHHHHHHHHcCCChhhCcC
Confidence            8889999999999999999985 3678988776655544443221     1 1112456789999999999999999999


Q ss_pred             HHHHHHHHHhccCCC
Q psy4332         168 FTEIHLFLQRKNLGY  182 (188)
Q Consensus       168 ~~el~~~l~~~~~~~  182 (188)
                      +.++...|+++.+..
T Consensus       258 ~~~l~~~l~~~~~~~  272 (279)
T cd05109         258 FRELVDEFSRMARDP  272 (279)
T ss_pred             HHHHHHHHHHhhcCC
Confidence            999988888775543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=2.2e-29  Score=188.30  Aligned_cols=163  Identities=44%  Similarity=0.812  Sum_probs=124.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++|++|+||||        +||+++.++.++++|||++.................+..|++||..
T Consensus       133 ~~~~~~i~~al~~lH~~~i~H~dlkp--------~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  204 (296)
T cd05095         133 IFMATQIASGMKYLSSLNFVHRDLAT--------RNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESI  204 (296)
T ss_pred             HHHHHHHHHHHHHHHHCCeecccCCh--------heEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHH
Confidence            34567889999999999999999999        9999999999999999998766443322222333345679999998


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-cccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-FIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      .++.++.++|+||+|+++|+++|+.+..||......+.............. ........++..+.+++.+||..||++|
T Consensus       205 ~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  284 (296)
T cd05095         205 LLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKER  284 (296)
T ss_pred             hcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            888899999999999999999987788999877665554433221111111 1112224467899999999999999999


Q ss_pred             CCHHHHHHHHHh
Q psy4332         166 PSFTEIHLFLQR  177 (188)
Q Consensus       166 ps~~el~~~l~~  177 (188)
                      |++.++++.|++
T Consensus       285 p~~~~i~~~l~~  296 (296)
T cd05095         285 PSFQEIHATLLE  296 (296)
T ss_pred             CCHHHHHHHHhC
Confidence            999999988764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.96  E-value=2.7e-29  Score=189.54  Aligned_cols=157  Identities=27%  Similarity=0.491  Sum_probs=122.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++................+..|++||.+.
T Consensus       113 ~~~~qi~~~L~~LH~~~iiH~dlkp--------~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~  184 (316)
T cd05108         113 NWCVQIAKGMNYLEERRLVHRDLAA--------RNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL  184 (316)
T ss_pred             HHHHHHHHHHHHHHhcCeeccccch--------hheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhc
Confidence            4567899999999999999999999        99999999999999999988765433222222333456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|+++| .|..||.+....+....+....     . ......++.++.+++.+||..+|++||+
T Consensus       185 ~~~~~~~~Di~slGv~l~el~t-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~cl~~~p~~Rps  257 (316)
T cd05108         185 HRIYTHQSDVWSYGVTVWELMT-FGSKPYDGIPASEISSILEKGE-----R-LPQPPICTIDVYMIMVKCWMIDADSRPK  257 (316)
T ss_pred             cCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHhCCC-----C-CCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999985 3678998876655443332211     1 1112345778999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++...|.++.
T Consensus       258 ~~~l~~~l~~~~  269 (316)
T cd05108         258 FRELIIEFSKMA  269 (316)
T ss_pred             HHHHHHHHHHHH
Confidence            999988777654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.96  E-value=1.6e-29  Score=192.32  Aligned_cols=157  Identities=31%  Similarity=0.530  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++................++..|+|||++.
T Consensus       177 ~~~~qi~~aL~~lH~~~ivHrDikp--------~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  248 (337)
T cd05054         177 SYSFQVARGMEFLASRKCIHRDLAA--------RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF  248 (337)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCc--------ceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence            4567899999999999999999999        99999999999999999987764433222223344566799999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++++++| .|..||.+....+........    .... ......+.++.+++.+||+.+|++||+
T Consensus       249 ~~~~~~~~Di~SlGv~l~el~t-~g~~p~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~l~~~cl~~~p~~RPs  322 (337)
T cd05054         249 DKVYTTQSDVWSFGVLLWEIFS-LGASPYPGVQIDEEFCRRLKE----GTRM-RAPEYATPEIYSIMLDCWHNNPEDRPT  322 (337)
T ss_pred             CCCCCccccHHHHHHHHHHHHH-cCCCCCCCCCccHHHHHHHhc----cCCC-CCCccCCHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999995 267888765433322222111    1111 112345778999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.|+.+.|+++
T Consensus       323 ~~ell~~l~~~  333 (337)
T cd05054         323 FSELVEILGDL  333 (337)
T ss_pred             HHHHHHHHHHH
Confidence            99999888865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=4e-29  Score=185.53  Aligned_cols=159  Identities=27%  Similarity=0.481  Sum_probs=124.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++|++|+|+||        +||+++.++.+||+|||+++...............++..|++||.+
T Consensus       112 ~~i~~qi~~~l~~lH~~~iiH~dlkp--------~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~  183 (279)
T cd05111         112 LNWCVQIAKGMYYLEEHRMVHRNLAA--------RNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI  183 (279)
T ss_pred             HHHHHHHHHHHHHHHHCCEeccccCc--------ceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHh
Confidence            34677899999999999999999999        9999999999999999998765433222222334456789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++||++| .|..||.+.........+...     ... ......+.++.+++.+||..||++||
T Consensus       184 ~~~~~~~~~Dv~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~li~~c~~~~p~~Rp  256 (279)
T cd05111         184 LFGRYTHQSDVWSYGVTVWEMMS-YGAEPYAGMRPHEVPDLLEKG-----ERL-AQPQICTIDVYMVMVKCWMIDENVRP  256 (279)
T ss_pred             ccCCcCchhhHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHCC-----CcC-CCCCCCCHHHHHHHHHHcCCCcccCc
Confidence            88889999999999999999995 277899887665544333221     111 11233567899999999999999999


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      ++.|+...|..+.+
T Consensus       257 s~~el~~~l~~~~~  270 (279)
T cd05111         257 TFKELANEFTRMAR  270 (279)
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999888887654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=8.8e-30  Score=189.89  Aligned_cols=156  Identities=21%  Similarity=0.249  Sum_probs=116.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus       107 ~~~~qi~~aL~~LH~~~ivH~dlkp--------~Nil~~~~~~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  176 (288)
T cd07871         107 IFMFQLLRGLSYCHKRKILHRDLKP--------QNLLINEKGELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLL  176 (288)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HHEEECCCCCEEECcCcceeeccCCC--ccccCceecccccChHHhc
Confidence            3467889999999999999999999        99999999999999999986543221  1223445678899999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc-----------------------ccCCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF-----------------------IYLPT  143 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~  143 (188)
                      + ..++.++||||+|+++|+++  +|..||.+....+....+..........                       .....
T Consensus       177 ~~~~~~~~~DiwslG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (288)
T cd07871         177 GSTEYSTPIDMWGVGCILYEMA--TGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHA  254 (288)
T ss_pred             CCcccCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhC
Confidence            5 45788999999999999999  5678998776555444332211110000                       00011


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFL  175 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l  175 (188)
                      +..+.+..+++.+||..||++|||++|+  |+||
T Consensus       255 ~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         255 PRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            3456789999999999999999999999  5543

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.8e-29  Score=200.07  Aligned_cols=147  Identities=20%  Similarity=0.296  Sum_probs=120.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+||||||        .||+++.++.+||+|||+++...............||+.|+|||.+.+
T Consensus       174 i~~qi~~aL~~lH~~~ivHrDlkp--------~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  245 (478)
T PTZ00267        174 LFYQIVLALDEVHSRKMMHRDLKS--------ANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER  245 (478)
T ss_pred             HHHHHHHHHHHHHhCCEEECCcCH--------HhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC
Confidence            456888999999999999999999        999999999999999999887654332223345568899999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+||++|+++  +|..||.+....+....+.....      .......+.++.+++.+||..||++||++
T Consensus       246 ~~~~~~~Dv~slG~~l~el~--tg~~Pf~~~~~~~~~~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dP~~Rps~  317 (478)
T PTZ00267        246 KRYSKKADMWSLGVILYELL--TLHRPFKGPSQREIMQQVLYGKY------DPFPCPVSSGMKALLDPLLSKNPALRPTT  317 (478)
T ss_pred             CCCCcHHhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCC------CCCCccCCHHHHHHHHHHhccChhhCcCH
Confidence            88999999999999999999  56789988877666666543221      11123467899999999999999999999


Q ss_pred             HHH
Q psy4332         169 TEI  171 (188)
Q Consensus       169 ~el  171 (188)
                      .++
T Consensus       318 ~~~  320 (478)
T PTZ00267        318 QQL  320 (478)
T ss_pred             HHH
Confidence            998

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.96  E-value=3.6e-29  Score=185.55  Aligned_cols=154  Identities=42%  Similarity=0.752  Sum_probs=122.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.++|++|++|+|+||        +||+++.++.++|+|||++................++..|+|||.+.+
T Consensus       127 ~~~~i~~~l~~lH~~~i~h~dlkp--------~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05049         127 IAVQIASGMVYLASQHFVHRDLAT--------RNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY  198 (280)
T ss_pred             HHHHHHHHHHHHhhCCeecccccc--------ceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc
Confidence            467889999999999999999999        999999999999999999875533222222233445678999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|++++++++ .|..||.+....+....+....      ...+....+..+.+++.+||..||++||++
T Consensus       199 ~~~~~~~Di~slG~il~e~~~-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  271 (280)
T cd05049         199 RKFTTESDVWSFGVVLWEIFT-YGKQPWYGLSNEEVIECITQGR------LLQRPRTCPSEVYDIMLGCWKRDPQQRINI  271 (280)
T ss_pred             CCcchhhhHHHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCC------cCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            889999999999999999995 2678988877666655554221      112224567899999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      .|+.+.|++
T Consensus       272 ~eil~~l~~  280 (280)
T cd05049         272 KDIHERLQK  280 (280)
T ss_pred             HHHHHHhhC
Confidence            999888753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.96  E-value=2.1e-29  Score=194.22  Aligned_cols=156  Identities=28%  Similarity=0.507  Sum_probs=120.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        .||+++.++.+||+|||++................++..|+|||.+.
T Consensus       218 ~~~~qi~~~l~~lH~~~ivH~Dlkp--------~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  289 (375)
T cd05104         218 SFSYQVAKGMSFLASKNCIHRDLAA--------RNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIF  289 (375)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCch--------hhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhc
Confidence            4567899999999999999999999        99999999999999999987664433222223334456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++++++| .|..||.+........+......    . .......+.++.+++.+||..||++||+
T Consensus       290 ~~~~~~~sDi~slG~~l~ellt-~g~~p~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~l~~li~~cl~~dP~~RPs  363 (375)
T cd05104         290 NCVYTFESDVWSYGILLWEIFS-LGSSPYPGMPVDSKFYKMIKEGY----R-MLSPECAPSEMYDIMKSCWDADPLKRPT  363 (375)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHh-cCCCCCCCCCchHHHHHHHHhCc----c-CCCCCCCCHHHHHHHHHHccCChhHCcC
Confidence            8889999999999999999996 36788877653333222222111    1 1111334678999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +.++++.|++
T Consensus       364 ~~eil~~l~~  373 (375)
T cd05104         364 FKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHHHHh
Confidence            9999988875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.5e-30  Score=189.99  Aligned_cols=148  Identities=18%  Similarity=0.217  Sum_probs=122.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......     ....+++.|+|||.+.+
T Consensus       106 ~~~qi~~~l~~lH~~~i~H~dlkp--------~NIli~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~  172 (291)
T cd05612         106 YASEIVCALEYLHSKEIVYRDLKP--------ENILLDKEGHIKLTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQS  172 (291)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCH--------HHeEECCCCCEEEEecCcchhccCCc-----ccccCChhhcCHHHHcC
Confidence            467889999999999999999999        99999999999999999987653321     23457888999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC-
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS-  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-  167 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+.....       ......+..+.+++.+||+.||.+|++ 
T Consensus       173 ~~~~~~~DiwSlG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~~~  243 (291)
T cd05612         173 KGHNKAVDWWALGILIYEML--VGYPPFFDDNPFGIYEKILAGKL-------EFPRHLDLYAKDLIKKLLVVDRTRRLGN  243 (291)
T ss_pred             CCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCc-------CCCccCCHHHHHHHHHHcCCCHHHccCC
Confidence            88899999999999999999  56789988877776666653321       112345778999999999999999995 


Q ss_pred             ----HHHH--HHHHHhc
Q psy4332         168 ----FTEI--HLFLQRK  178 (188)
Q Consensus       168 ----~~el--~~~l~~~  178 (188)
                          ++++  |+|++.+
T Consensus       244 ~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         244 MKNGADDVKNHRWFKSV  260 (291)
T ss_pred             ccCCHHHHhcCccccCC
Confidence                8998  7888754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0193|consensus

Probab=99.96  E-value=1.9e-30  Score=200.56  Aligned_cols=163  Identities=21%  Similarity=0.310  Sum_probs=126.1

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      -+...+|.+++-|.-|||.++|||+|||.        .||++..++.+||+|||++..-..-..........+...||||
T Consensus       488 ~~~idIAqQiaqGM~YLHAK~IIHrDLKS--------nNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAP  559 (678)
T KOG0193|consen  488 NTTIDIAQQIAQGMDYLHAKNIIHRDLKS--------NNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAP  559 (678)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhccc--------cceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcH
Confidence            34566899999999999999999999999        9999999999999999986533211111233455677889999


Q ss_pred             hhhhc---CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          84 ESVRL---RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        84 e~~~~---~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      |++.-   ..|++.+|||+||+++|||+  +|..||......+++-++..+..  ..........++.++.+|+..||..
T Consensus       560 EvIRmqd~nPfS~qSDVYaFGiV~YELl--tg~lPysi~~~dqIifmVGrG~l--~pd~s~~~s~~pk~mk~Ll~~C~~~  635 (678)
T KOG0193|consen  560 EVIRMQDDNPFSFQSDVYAFGIVWYELL--TGELPYSIQNRDQIIFMVGRGYL--MPDLSKIRSNCPKAMKRLLSDCWKF  635 (678)
T ss_pred             HHHhhcccCCCCcccchhhhhHHHHHHH--hCcCCcCCCChhheEEEeccccc--CccchhhhccCHHHHHHHHHHHHhc
Confidence            99973   46899999999999999999  67899996555554433332211  1223334567788999999999999


Q ss_pred             CCCCCCCHHHHHHHHHhc
Q psy4332         161 SPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       161 dp~~Rps~~el~~~l~~~  178 (188)
                      ++++||.+.+++..|..+
T Consensus       636 ~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  636 DREERPLFPQLLSKLEEL  653 (678)
T ss_pred             CcccCccHHHHHHHHHHh
Confidence            999999999997765544

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.96  E-value=1.3e-29  Score=189.49  Aligned_cols=158  Identities=14%  Similarity=0.148  Sum_probs=117.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-----cccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-----RVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~   82 (188)
                      .++.+++.++.|+|+++|+||||||        +||+++.++.++|+|||+++........     .......+|+.|+|
T Consensus       130 ~i~~qi~~~l~~lH~~~iiHrDiKp--------~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a  201 (294)
T PHA02882        130 NIMKDMLTTLEYIHEHGISHGDIKP--------ENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAG  201 (294)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccC
Confidence            3678899999999999999999999        9999999999999999998766432211     11123458899999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      ||...+..++.++||||+|+++++++  +|..||.+... ..............-.......+..+..+.+++..|+..+
T Consensus       202 pe~~~~~~~~~~~DiwSlG~~l~el~--~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (294)
T PHA02882        202 LDAHNGACVTRRGDLESLGYCMLKWA--GIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLS  279 (294)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHH--hCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCC
Confidence            99998888999999999999999999  56899987632 2211111000000000001112345678999999999999


Q ss_pred             CCCCCCHHHHHHHH
Q psy4332         162 PTERPSFTEIHLFL  175 (188)
Q Consensus       162 p~~Rps~~el~~~l  175 (188)
                      |++||+++++.+.|
T Consensus       280 ~~~rp~~~~l~~~~  293 (294)
T PHA02882        280 YEEKPDYDALIKIF  293 (294)
T ss_pred             CCCCCCHHHHHHhh
Confidence            99999999998765

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.7e-29  Score=184.72  Aligned_cols=155  Identities=30%  Similarity=0.674  Sum_probs=123.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|+++++|+|+||        +||++++++.+||+|||+++.......+........+..|++||.+.+
T Consensus       118 ~~~~i~~aL~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05035         118 FMVDIALGMEYLSNRNFIHRDLAA--------RNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD  189 (273)
T ss_pred             HHHHHHHHHHHHHhCCeeccccch--------heEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc
Confidence            567889999999999999999999        999999999999999999876654432222223334567999999987


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++||+++ .|..||.+....+....+.....      .......+.++.+++.+||+.||++||++
T Consensus       190 ~~~~~~~Dv~SlG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  262 (273)
T cd05035         190 RVYTSKSDVWAFGVTMWEIAT-RGQTPYPGVENHEIYDYLRHGNR------LKQPEDCLDELYDLMYSCWRADPKDRPTF  262 (273)
T ss_pred             CCCCcccchHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCcCCCHHHHHHHHHHcCCChhhCcCH
Confidence            888999999999999999995 26789988776666555543211      11123567899999999999999999999


Q ss_pred             HHHHHHHHhc
Q psy4332         169 TEIHLFLQRK  178 (188)
Q Consensus       169 ~el~~~l~~~  178 (188)
                      .++...|+++
T Consensus       263 ~e~~~~l~~~  272 (273)
T cd05035         263 TKLREVLENI  272 (273)
T ss_pred             HHHHHHHHhh
Confidence            9999988764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=7.4e-30  Score=192.99  Aligned_cols=151  Identities=21%  Similarity=0.338  Sum_probs=122.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        .||+++.++.+||+|||++.......  .......|++.|+|||.+.+
T Consensus       101 ~~~ql~~~L~~lH~~~ivH~dlkp--------~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  170 (320)
T cd05590         101 YAAEITSALMFLHDKGIIYRDLKL--------DNVLLDHEGHCKLADFGMCKEGIFNG--KTTSTFCGTPDYIAPEILQE  170 (320)
T ss_pred             HHHHHHHHHHHHHHCCeEeCCCCH--------HHeEECCCCcEEEeeCCCCeecCcCC--CcccccccCccccCHHHHcC
Confidence            567889999999999999999999        99999999999999999976543222  12234567889999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+.....       ......+.++.+++.+||+.||++||++
T Consensus       171 ~~~~~~~DiwslG~il~el~--~g~~Pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         171 MLYGPSVDWWAMGVLLYEML--CGHAPFEAENEDDLFEAILNDEV-------VYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCCCccchhhhHHHHHHHh--hCCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            88899999999999999999  57889998887777666653221       1123467899999999999999999998


Q ss_pred             ------HHH--HHHHHhc
Q psy4332         169 ------TEI--HLFLQRK  178 (188)
Q Consensus       169 ------~el--~~~l~~~  178 (188)
                            +++  |+||+.+
T Consensus       242 ~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         242 LTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCHHHHHcCCCcCCC
Confidence                  676  7777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.96  E-value=2.1e-29  Score=192.94  Aligned_cols=158  Identities=16%  Similarity=0.159  Sum_probs=118.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++......   ......++..|+|||.+.
T Consensus       123 ~~~~qi~~aL~~LH~~givHrDikp--------~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~  191 (355)
T cd07874         123 YLLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVIL  191 (355)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCh--------HHEEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHHc
Confidence            3567899999999999999999999        99999999999999999987654321   223345788899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC-------------------C-----------
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG-------------------E-----------  137 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------~-----------  137 (188)
                      +..++.++||||+|+++|+++  +|..||.+....+.............                   .           
T Consensus       192 ~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (355)
T cd07874         192 GMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP  269 (355)
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcc
Confidence            888999999999999999999  56789987664443332211100000                   0           


Q ss_pred             -c----ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         138 -F----IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       138 -~----~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                       .    ........+.++.+++.+||..||++|||+.|+  |+||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         270 DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             ccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence             0    000011235678999999999999999999999  7788744

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.96  E-value=5.2e-29  Score=184.63  Aligned_cols=154  Identities=38%  Similarity=0.678  Sum_probs=121.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++................++..|+|||.+.+
T Consensus       124 ~~~~l~~~l~~lH~~~~vH~dlkp--------~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         124 MAGEIADGMAYLNANKFVHRDLAA--------RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             HHHHHHHHHHHHHHCCcccCCcch--------heEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            466889999999999999999999        999999999999999999876543322222223344678999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||||+++|+++++ +..||.+....+....+.....      .......+..+.+++.+||+.+|++||++
T Consensus       196 ~~~~~~~Di~slG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~  268 (277)
T cd05062         196 GVFTTYSDVWSFGVVLWEIATL-AEQPYQGMSNEQVLRFVMEGGL------LDKPDNCPDMLFELMRMCWQYNPKMRPSF  268 (277)
T ss_pred             CCcCchhHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            8899999999999999999962 5678888776665554443211      11123467789999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      .|+...|++
T Consensus       269 ~e~l~~l~~  277 (277)
T cd05062         269 LEIISSIKE  277 (277)
T ss_pred             HHHHHHhhC
Confidence            999887753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.96  E-value=5.7e-29  Score=185.58  Aligned_cols=156  Identities=31%  Similarity=0.569  Sum_probs=124.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.+||+|||++................++..|++||.+.
T Consensus       131 ~i~~~i~~~l~~LH~~~ivH~dikp--------~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  202 (290)
T cd05045         131 SFAWQISRGMQYLAEMKLVHRDLAA--------RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF  202 (290)
T ss_pred             HHHHHHHHHHHHHHHCCeehhhhhh--------heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc
Confidence            4567899999999999999999999        99999999999999999987664433222223334556799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++++++|+ |..||.+..+.+....+....     . .......+.++.+++.+||+.+|++||+
T Consensus       203 ~~~~~~~~Di~slG~~l~el~t~-g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~cl~~~P~~Rp~  275 (290)
T cd05045         203 DHIYTTQSDVWSFGVLLWEIVTL-GGNPYPGIAPERLFNLLKTGY-----R-MERPENCSEEMYNLMLTCWKQEPDKRPT  275 (290)
T ss_pred             cCCcchHhHHHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHhCCC-----C-CCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence            88889999999999999999952 678998887766665543221     1 1112456789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       276 ~~~i~~~l~~~  286 (290)
T cd05045         276 FADISKELEKM  286 (290)
T ss_pred             HHHHHHHHHHH
Confidence            99999999876

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=1.6e-29  Score=188.25  Aligned_cols=151  Identities=20%  Similarity=0.197  Sum_probs=115.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+|+||        +||+++.++.+||+|||++.......   ......++..|+|||.+.
T Consensus       112 ~~~~qi~~al~~lH~~~ivH~dikp--------~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  180 (288)
T cd07863         112 DLMRQFLRGLDFLHANCIVHRDLKP--------ENILVTSGGQVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLL  180 (288)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCCEEECccCccccccCcc---cCCCccccccccCchHhh
Confidence            3567889999999999999999999        99999999999999999987654321   122345678899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc--------------------ccCCCCCCh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF--------------------IYLPTPQTT  147 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~  147 (188)
                      +..++.++||||+|+++|+++  +|..||.+........++..........                    .....+..+
T Consensus       181 ~~~~~~~~DiwslG~~l~~l~--~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (288)
T cd07863         181 QSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIE  258 (288)
T ss_pred             CCCCCCcchhhhHHHHHHHHH--hCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcC
Confidence            888999999999999999999  6678887776555444433211000000                    000113456


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      .++.+++.+||+.||++||++.|+
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~~~  282 (288)
T cd07863         259 ESGAQLLLEMLTFNPHKRISAFRA  282 (288)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHH
Confidence            788999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=1.9e-29  Score=189.32  Aligned_cols=160  Identities=18%  Similarity=0.219  Sum_probs=117.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus       107 ~~~~qi~~al~~lH~~~ivH~dlkp--------~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  176 (303)
T cd07869         107 LFLFQLLRGLSYIHQRYILHRDLKP--------QNLLISDTGELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLL  176 (303)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCCEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHc
Confidence            4567899999999999999999999        99999999999999999976543222  1223445778899999986


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCC----------------cc---------c
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGE----------------FI---------Y  140 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~----------------~~---------~  140 (188)
                      +. .++.++||||+|+++|+++  +|..||.+... .+....+.........                ..         .
T Consensus       177 ~~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (303)
T cd07869         177 GSTEYSTCLDMWGVGCIFVEMI--QGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQA  254 (303)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHH
Confidence            53 4788999999999999999  56789987543 2222222111000000                00         0


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      ......+.++.+++.+||+.||++|||++|+  |+||+++.
T Consensus       255 ~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         255 WNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             hhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            0011234678899999999999999999999  88998764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.96  E-value=3.5e-29  Score=187.91  Aligned_cols=156  Identities=32%  Similarity=0.559  Sum_probs=124.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++|++|+||||        +||+++.++.+||+|||+++...............++..|+|||.+.+
T Consensus       142 ~~~qi~~al~~LH~~givH~dlkp--------~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (304)
T cd05101         142 CTYQVARGMEYLASQKCIHRDLAA--------RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD  213 (304)
T ss_pred             HHHHHHHHHHHHHHCCeeeccccc--------ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc
Confidence            356899999999999999999999        999999999999999999877644332222223345567999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++|+ +..||.+....+....+.....      .......+.++.+++.+||..+|++||++
T Consensus       214 ~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rps~  286 (304)
T cd05101         214 RVYTHQSDVWSFGVLMWEIFTL-GGSPYPGIPVEELFKLLKEGHR------MDKPANCTNELYMMMRDCWHAIPSHRPTF  286 (304)
T ss_pred             CCCCchhhHHHHHHHHHHHHcC-CCCCcccCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcccChhhCCCH
Confidence            8889999999999999999962 5778888777666665543211      11123567899999999999999999999


Q ss_pred             HHHHHHHHhcc
Q psy4332         169 TEIHLFLQRKN  179 (188)
Q Consensus       169 ~el~~~l~~~~  179 (188)
                      .++...|+++-
T Consensus       287 ~e~l~~l~~~~  297 (304)
T cd05101         287 KQLVEDLDRIL  297 (304)
T ss_pred             HHHHHHHHHHH
Confidence            99988887763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.96  E-value=1.1e-29  Score=191.75  Aligned_cols=151  Identities=26%  Similarity=0.352  Sum_probs=120.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+||||||        +||+++.++.++|+|||++.......  .......++..|+|||.+.+
T Consensus       101 ~~~qi~~~l~~lH~~~ivHrDlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05620         101 YAAEIVCGLQFLHSKGIIYRDLKL--------DNVMLDRDGHIKIADFGMCKENVFGD--NRASTFCGTPDYIAPEILQG  170 (316)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCH--------HHeEECCCCCEEeCccCCCeecccCC--CceeccCCCcCccCHHHHcC
Confidence            456899999999999999999999        99999999999999999876432211  12234557889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  .|..||.+....+..+.+....       .......+.++.+++.+||+.||++|+++
T Consensus       171 ~~~~~~~DiwslGvil~el~--~g~~Pf~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dP~~R~~~  241 (316)
T cd05620         171 LKYTFSVDWWSFGVLLYEML--IGQSPFHGDDEDELFESIRVDT-------PHYPRWITKESKDILEKLFERDPTRRLGV  241 (316)
T ss_pred             CCCCcccchhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCC-------CCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence            88999999999999999999  5678998887766666554221       11123467899999999999999999997


Q ss_pred             -HHH--HHHHHhc
Q psy4332         169 -TEI--HLFLQRK  178 (188)
Q Consensus       169 -~el--~~~l~~~  178 (188)
                       +++  |+||+.+
T Consensus       242 ~~~~~~h~~f~~~  254 (316)
T cd05620         242 VGNIRGHPFFKTI  254 (316)
T ss_pred             hHHHHcCCCcCCC
Confidence             466  6777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG1095|consensus

Probab=99.96  E-value=1.2e-29  Score=208.63  Aligned_cols=161  Identities=35%  Similarity=0.608  Sum_probs=137.0

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .+...+|.++|.|..||+++++|||||..        .|+|++....+||+|||+++.+-...-++.......+..||||
T Consensus       802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAa--------RNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~P  873 (1025)
T KOG1095|consen  802 RDLLAFALDVAKGMNYLESKHFVHRDLAA--------RNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPP  873 (1025)
T ss_pred             HHHHHHHHHHhhhhHHHHhCCCcCcchhh--------hheeecccCcEEEcccchhHhhhhchheeccCccccceecCCH
Confidence            34456788999999999999999999999        9999999999999999999976655555555554567889999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+..+.|+.|+||||||+++||++| .|..||.+....++...+...    +  .-.+.+.+++.+.++|..||..+|+
T Consensus       874 Esl~d~iFtskSDvWsFGVllWEifs-lG~~PY~~~~n~~v~~~~~~g----g--RL~~P~~CP~~ly~lM~~CW~~~pe  946 (1025)
T KOG1095|consen  874 ESLKDGIFTSKSDVWSFGVLLWEIFS-LGATPYPSRSNFEVLLDVLEG----G--RLDPPSYCPEKLYQLMLQCWKHDPE  946 (1025)
T ss_pred             HHHhhcccccccchhhhHHHHHHHHh-CCCCCCCCcchHHHHHHHHhC----C--ccCCCCCCChHHHHHHHHHccCChh
Confidence            99999999999999999999999999 579999999988888766543    2  2334477899999999999999999


Q ss_pred             CCCCHHHHHHHHHhcc
Q psy4332         164 ERPSFTEIHLFLQRKN  179 (188)
Q Consensus       164 ~Rps~~el~~~l~~~~  179 (188)
                      +||+|..++..+..+.
T Consensus       947 ~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  947 DRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             hCccHHHHHhhhhhhh
Confidence            9999999977666553

>KOG0986|consensus

Probab=99.96  E-value=4e-30  Score=193.26  Aligned_cols=156  Identities=19%  Similarity=0.256  Sum_probs=128.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..|.+|++++.+||..+|++||+||        +|||+|+.|+++|+|+|++..+..+.   ......||.+|||||++
T Consensus       290 ~FYAAEi~cGLehlH~~~iVYRDLKP--------eNILLDd~GhvRISDLGLAvei~~g~---~~~~rvGT~GYMAPEvl  358 (591)
T KOG0986|consen  290 RFYAAEIICGLEHLHRRRIVYRDLKP--------ENILLDDHGHVRISDLGLAVEIPEGK---PIRGRVGTVGYMAPEVL  358 (591)
T ss_pred             HHHHHHHHhhHHHHHhcceeeccCCh--------hheeeccCCCeEeeccceEEecCCCC---ccccccCcccccCHHHH
Confidence            34578999999999999999999999        99999999999999999998887654   23344789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .++.++.++|.|++||++|||+  .|..||.......-.+.+..........   ....++++..++.+..|..||++|.
T Consensus       359 ~ne~Y~~s~Dwf~lGCllYemi--~G~sPFr~~KeKvk~eEvdrr~~~~~~e---y~~kFS~eakslc~~LL~Kdp~~RL  433 (591)
T KOG0986|consen  359 QNEVYDFSPDWFSLGCLLYEMI--AGHSPFRQRKEKVKREEVDRRTLEDPEE---YSDKFSEEAKSLCEGLLTKDPEKRL  433 (591)
T ss_pred             cCCcccCCccHHHHHhHHHHHH--cccCchhhhhhhhhHHHHHHHHhcchhh---cccccCHHHHHHHHHHHccCHHHhc
Confidence            9999999999999999999999  8899998876544444444322222222   2267899999999999999999998


Q ss_pred             CHH-----HH--HHHHHhc
Q psy4332         167 SFT-----EI--HLFLQRK  178 (188)
Q Consensus       167 s~~-----el--~~~l~~~  178 (188)
                      .+.     ++  |++|+.+
T Consensus       434 Gcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  434 GCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             cCCCcCcchhhhCcccccC
Confidence            655     56  8888766

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.9e-30  Score=191.65  Aligned_cols=151  Identities=23%  Similarity=0.236  Sum_probs=121.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+||||||        +||+++.++.++|+|||+++......  .......|++.|+|||.+.+
T Consensus        98 ~~~qi~~~l~~lH~~~i~HrDlkp--------~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  167 (312)
T cd05585          98 YTAELLCALENLHKFNVIYRDLKP--------ENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLG  167 (312)
T ss_pred             HHHHHHHHHHHHHhCCeEeCCCCH--------HHeEECCCCcEEEEECcccccCccCC--CccccccCCcccCCHHHHcC
Confidence            566889999999999999999999        99999999999999999987543222  12234557889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC-
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS-  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-  167 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+....       .......+.++.+++.+||..||++||+ 
T Consensus       168 ~~~~~~~DvwslGvil~el~--tg~~pf~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         168 HGYTKAVDWWTLGVLLYEML--TGLPPFYDENVNEMYRKILQEP-------LRFPDGFDRDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             CCCCCccceechhHHHHHHH--hCCCCcCCCCHHHHHHHHHcCC-------CCCCCcCCHHHHHHHHHHcCCCHHHcCCC
Confidence            88999999999999999999  5788998887666666554321       1122456789999999999999999985 


Q ss_pred             --HHHH--HHHHHhc
Q psy4332         168 --FTEI--HLFLQRK  178 (188)
Q Consensus       168 --~~el--~~~l~~~  178 (188)
                        +.++  |+||.+.
T Consensus       239 ~~~~e~l~hp~~~~~  253 (312)
T cd05585         239 NGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCHHHHHcCCCcCCC
Confidence              6676  6777653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=1.5e-29  Score=191.06  Aligned_cols=151  Identities=25%  Similarity=0.377  Sum_probs=121.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......|++.|+|||.+.+
T Consensus       101 ~~~qi~~al~~LH~~~ivH~dlkp--------~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~  170 (316)
T cd05592         101 YAAEIICGLQFLHKKGIIYRDLKL--------DNVLLDKDGHIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKG  170 (316)
T ss_pred             HHHHHHHHHHHHHHCCEEeCCCCH--------HHeEECCCCCEEEccCcCCeECCCCC--CccccccCCccccCHHHHcC
Confidence            567899999999999999999999        99999999999999999987543322  12234567889999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  .|..||.+....+....+....       .......+.++.+++.+||+.||++||++
T Consensus       171 ~~~~~~~DvwslG~il~ell--~G~~Pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~  241 (316)
T cd05592         171 QKYNESVDWWSFGVLLYEML--IGQSPFHGEDEDELFDSILNDR-------PHFPRWISKEAKDCLSKLFERDPTKRLGV  241 (316)
T ss_pred             CCCCCcccchhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCC-------CCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence            88899999999999999999  5678999887766666554321       11123467889999999999999999986


Q ss_pred             H-HH--HHHHHhc
Q psy4332         169 T-EI--HLFLQRK  178 (188)
Q Consensus       169 ~-el--~~~l~~~  178 (188)
                      . ++  |+++..+
T Consensus       242 ~~~l~~h~~~~~~  254 (316)
T cd05592         242 DGDIRQHPFFRGI  254 (316)
T ss_pred             hHHHHcCcccCCC
Confidence            5 56  5666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.96  E-value=6.9e-29  Score=184.32  Aligned_cols=154  Identities=40%  Similarity=0.710  Sum_probs=122.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++|+|||++........+.......+++.|++||.+.
T Consensus       126 ~~~~qi~~al~~LH~~~i~H~dlkp--------~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05092         126 AIASQIASGMVYLASLHFVHRDLAT--------RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  197 (280)
T ss_pred             HHHHHHHHHHHHHHHCCeecccccH--------hhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence            4567888999999999999999999        99999999999999999987654333222233344567799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|++++ .|..||......+....+.....      .......+..+.+++.+||..||++||+
T Consensus       198 ~~~~~~~~Di~slG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~P~~Rp~  270 (280)
T cd05092         198 YRKFTTESDIWSFGVVLWEIFT-YGKQPWYQLSNTEAIECITQGRE------LERPRTCPPEVYAIMQGCWQREPQQRMV  270 (280)
T ss_pred             cCCcCchhhHHHHHHHHHHHHc-CCCCCCccCCHHHHHHHHHcCcc------CCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            8889999999999999999995 36789987766665554443211      1112356788999999999999999999


Q ss_pred             HHHHHHHHH
Q psy4332         168 FTEIHLFLQ  176 (188)
Q Consensus       168 ~~el~~~l~  176 (188)
                      ++++...|+
T Consensus       271 ~~~l~~~l~  279 (280)
T cd05092         271 IKDIHSRLQ  279 (280)
T ss_pred             HHHHHHHHh
Confidence            999988876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=5.9e-29  Score=185.66  Aligned_cols=155  Identities=34%  Similarity=0.593  Sum_probs=123.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++|+|+|+||        .||+++.++.+||+|||++................++..|+|||.+.+
T Consensus       137 i~~qi~~al~~LH~~~ivH~dlkp--------~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  208 (293)
T cd05053         137 FAYQVARGMEFLASKKCIHRDLAA--------RNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD  208 (293)
T ss_pred             HHHHHHHHHHHHHHCCccccccce--------eeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc
Confidence            577899999999999999999999        999999999999999999876644332222223334567999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||||+++|++++. |..||.+....+....+....     . .......+.++.+++.+||..+|++|||+
T Consensus       209 ~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~  281 (293)
T cd05053         209 RVYTHQSDVWSFGVLLWEIFTL-GGSPYPGIPVEELFKLLKEGY-----R-MEKPQNCTQELYHLMRDCWHEVPSQRPTF  281 (293)
T ss_pred             CCcCcccceeehhhHHHHHhcC-CCCCCCCCCHHHHHHHHHcCC-----c-CCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence            8889999999999999999962 678888877666555443221     1 11123457799999999999999999999


Q ss_pred             HHHHHHHHhc
Q psy4332         169 TEIHLFLQRK  178 (188)
Q Consensus       169 ~el~~~l~~~  178 (188)
                      .+++..|+++
T Consensus       282 ~eil~~l~~~  291 (293)
T cd05053         282 KQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHHh
Confidence            9999988875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.96  E-value=9.2e-29  Score=183.80  Aligned_cols=154  Identities=36%  Similarity=0.698  Sum_probs=122.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+|+||        +||+++.++.+|++|||++................++..|++||.+.+
T Consensus       129 i~~~i~~al~~lH~~~i~H~dlkp--------~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05090         129 IAIQIAAGMEYLSSHFFVHKDLAA--------RNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY  200 (283)
T ss_pred             HHHHHHHHHHHHHhcCeehhcccc--------ceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc
Confidence            567889999999999999999999        999999999999999999877644332222334445667999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++++++| .|..||.+.......+.+.....      .......+.++.+++.+||..||++||++
T Consensus       201 ~~~~~~~Dv~slG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~  273 (283)
T cd05090         201 GKFSSDSDIWSFGVVLWEIFS-FGLQPYYGFSNQEVIEMVRKRQL------LPCSEDCPPRMYSLMTECWQEGPSRRPRF  273 (283)
T ss_pred             CCCCchhhhHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence            888999999999999999995 26789988776665555543211      11224567899999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      .++.+.|..
T Consensus       274 ~~i~~~l~~  282 (283)
T cd05090         274 KDIHTRLRS  282 (283)
T ss_pred             HHHHHHhhc
Confidence            999887753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=1.3e-28  Score=180.59  Aligned_cols=155  Identities=28%  Similarity=0.515  Sum_probs=122.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.+||+|||++.......... ......++..|+|||.+
T Consensus        99 ~i~~qi~~al~~lH~~~i~H~dlkp--------~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (257)
T cd05116          99 ELVHQVSMGMKYLEETNFVHRDLAA--------RNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECM  170 (257)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccch--------hhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHh
Confidence            4567889999999999999999999        99999999999999999987664332211 11222334679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+...+.++|+||||+++||++| .|..||.+....+....+....     . .......+.++.+++.+||..||++||
T Consensus       171 ~~~~~~~~~Di~slG~~l~el~t-~g~~p~~~~~~~~~~~~i~~~~-----~-~~~~~~~~~~l~~li~~~~~~~p~~Rp  243 (257)
T cd05116         171 NYYKFSSKSDVWSFGVLMWEAFS-YGQKPYKGMKGNEVTQMIESGE-----R-MECPQRCPPEMYDLMKLCWTYGVDERP  243 (257)
T ss_pred             ccCCcCchhHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHCCC-----C-CCCCCCCCHHHHHHHHHHhccCchhCc
Confidence            87788899999999999999995 2678998887777666664322     1 112245678999999999999999999


Q ss_pred             CHHHHHHHHHh
Q psy4332         167 SFTEIHLFLQR  177 (188)
Q Consensus       167 s~~el~~~l~~  177 (188)
                      ++.+|.+.|++
T Consensus       244 ~~~~i~~~l~~  254 (257)
T cd05116         244 GFAVVELRLRN  254 (257)
T ss_pred             CHHHHHHHHhc
Confidence            99999888875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=2.3e-29  Score=187.34  Aligned_cols=153  Identities=19%  Similarity=0.197  Sum_probs=114.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......+++.|+|||.+.
T Consensus       104 ~~~~qi~~~L~~lH~~~i~H~dlkp--------~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  174 (287)
T cd07848         104 SYIYQLIKAIHWCHKNDIVHRDIKP--------ENLLISHNDVLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLL  174 (287)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEEcCCCcEEEeeccCccccccccc-ccccccccccccCCcHHHc
Confidence            4667889999999999999999999        999999999999999999877643221 1222345788899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC----------------Cccc---------CC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG----------------EFIY---------LP  142 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------~~~~---------~~  142 (188)
                      +..++.++|+||+|+++|+++  +|..||.+....+....+........                ....         ..
T Consensus       175 ~~~~~~~~DiwslGvil~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T cd07848         175 GAPYGKAVDMWSVGCILGELS--DGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRY  252 (287)
T ss_pred             CCCCCCchhHHhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhh
Confidence            888999999999999999999  56789987654443322221110000                0000         00


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      ....+.++.+++.+||+.||++|||++++
T Consensus       253 ~~~~s~~~~dll~~~L~~~P~~R~s~~~~  281 (287)
T cd07848         253 LGILSGVLLDLMKNLLKLNPTDRYLTEQC  281 (287)
T ss_pred             hcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence            12356789999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.96  E-value=1.2e-29  Score=192.55  Aligned_cols=147  Identities=18%  Similarity=0.229  Sum_probs=120.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......     ....+++.|+|||.+.+
T Consensus       123 ~~~qi~~aL~~LH~~~ivH~dlkp--------~NIll~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~  189 (329)
T PTZ00263        123 YHAELVLAFEYLHSKDIIYRDLKP--------ENLLLDNKGHVKVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQS  189 (329)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCH--------HHEEECCCCCEEEeeccCceEcCCCc-----ceecCChhhcCHHHHcC
Confidence            456788999999999999999999        99999999999999999987654321     23457889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC-
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS-  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-  167 (188)
                      ...+.++||||+|+++|+++  +|..||.+....+....+.....       ......+.++.+++.+||..||++|++ 
T Consensus       190 ~~~~~~~DiwslG~il~ell--tg~~pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        190 KGHGKAVDWWTMGVLLYEFI--AGYPPFFDDTPFRIYEKILAGRL-------KFPNWFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             CCCCCcceeechHHHHHHHH--cCCCCCCCCCHHHHHHHHhcCCc-------CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            88899999999999999999  67899988877666666543211       112346778999999999999999996 


Q ss_pred             ----HHHH--HHHHHh
Q psy4332         168 ----FTEI--HLFLQR  177 (188)
Q Consensus       168 ----~~el--~~~l~~  177 (188)
                          ++++  |+||++
T Consensus       261 ~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        261 LKGGVADVKNHPYFHG  276 (329)
T ss_pred             CCCCHHHHhcCCccCC
Confidence                6888  788765

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=1.1e-28  Score=183.12  Aligned_cols=158  Identities=30%  Similarity=0.597  Sum_probs=124.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|+++++|+|+||        .||+++.++.+|++|||+++...............++..|+|||.+.
T Consensus       121 ~i~~~i~~~l~~LH~~~i~H~di~p--------~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  192 (280)
T cd05043         121 HMAIQIACGMSYLHKRGVIHKDIAA--------RNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLV  192 (280)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccCH--------hhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHh
Confidence            3566899999999999999999999        99999999999999999987654332211222334566799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|++++++++ .|..||......+....+....     . .......++++.+++.+||..+|++||+
T Consensus       193 ~~~~~~~~Di~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rps  265 (280)
T cd05043         193 NKEYSSASDVWSFGVLLWELMT-LGQTPYVEIDPFEMAAYLKDGY-----R-LAQPINCPDELFAVMACCWALDPEERPS  265 (280)
T ss_pred             cCCCCchhhHHHhHHHHHHHhc-CCCCCcCcCCHHHHHHHHHcCC-----C-CCCCCcCCHHHHHHHHHHcCCChhhCCC
Confidence            8888999999999999999995 2688998877666555443221     1 1112345789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +.++...|+++..
T Consensus       266 ~~~~~~~l~~~~~  278 (280)
T cd05043         266 FSQLVQCLTDFHA  278 (280)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=1.5e-29  Score=191.34  Aligned_cols=150  Identities=20%  Similarity=0.339  Sum_probs=122.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ......+++.|+|||.+.+
T Consensus       101 ~~~qi~~aL~~LH~~~ivHrDikp--------~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05591         101 YAAEVTLALMFLHRHGVIYRDLKL--------DNILLDAEGHCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQE  170 (321)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCH--------HHeEECCCCCEEEeecccceecccCCc--cccccccCccccCHHHHcC
Confidence            567889999999999999999999        999999999999999999875432221  2234457889999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+.....       ......+.++.+++.+||+.||++|+  
T Consensus       171 ~~~~~~~DvwslG~il~el~--tg~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~ll~~~L~~dp~~R~~~  241 (321)
T cd05591         171 LEYGPSVDWWALGVLMYEMM--AGQPPFEADNEDDLFESILHDDV-------LYPVWLSKEAVSILKAFMTKNPNKRLGC  241 (321)
T ss_pred             CCCCCccceechhHHHHHHh--cCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            88999999999999999999  57899998887777766653221       11234578999999999999999999  


Q ss_pred             -----CHHHH--HHHHHh
Q psy4332         167 -----SFTEI--HLFLQR  177 (188)
Q Consensus       167 -----s~~el--~~~l~~  177 (188)
                           +++++  |+|++.
T Consensus       242 ~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         242 VASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             CCCCCCHHHHhcCCccCC
Confidence                 78888  677654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=2.9e-29  Score=198.54  Aligned_cols=157  Identities=15%  Similarity=0.143  Sum_probs=116.0

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcc----------------eEEEccCCCCccCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKF----------------EIKISDFATDSDMFSSDYYRV   70 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~----------------~~kl~dfg~~~~~~~~~~~~~   70 (188)
                      .++.+|+.|+.|||+ .||+||||||        +||+++.++                .+||+|||.+.....     .
T Consensus       235 ~i~~qi~~aL~yLH~~~gIiHrDlKP--------~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~  301 (467)
T PTZ00284        235 QIIFQTGVALDYFHTELHLMHTDLKP--------ENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----S  301 (467)
T ss_pred             HHHHHHHHHHHHHHhcCCeecCCCCH--------HHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-----c
Confidence            466789999999997 5999999999        888887654                499999998754321     2


Q ss_pred             cCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-------------
Q psy4332          71 HDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-------------  137 (188)
Q Consensus        71 ~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------  137 (188)
                      .....+|+.|+|||++.+..++.++|||||||++|||+  +|..||.+....+....+.........             
T Consensus       302 ~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ell--tG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~  379 (467)
T PTZ00284        302 RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY--TGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARL  379 (467)
T ss_pred             cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHH
Confidence            23456788999999999888999999999999999999  567899877655443333221110000             


Q ss_pred             --------ccc--------------CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         138 --------FIY--------------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       138 --------~~~--------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                              ...              .........+.+||.+||..||++|||++|+  |+||++..
T Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        380 LYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             HhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence                    000              0000113567899999999999999999999  88998753

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.96  E-value=4.2e-29  Score=183.60  Aligned_cols=154  Identities=31%  Similarity=0.521  Sum_probs=121.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||+++++|++|++        .||+++.++.+||+|||++....................|+|||.+
T Consensus       106 ~~i~~~i~~~l~~Lh~~~iiH~~l~~--------~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  177 (259)
T PF07714_consen  106 LSIAIQIAEALSYLHSNNIIHGNLSP--------SNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVL  177 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEEST-SG--------GGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHH
T ss_pred             cccccccccccccccccccccccccc--------cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34678899999999999999999999        9999999999999999998776333333333445566789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||++++|++|+ +..||.+....+....+.....      .......+..+.+++..||..+|++||
T Consensus       178 ~~~~~~~ksDVysfG~~l~ei~~~-~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~C~~~~p~~RP  250 (259)
T PF07714_consen  178 KDGEYTKKSDVYSFGMLLYEILTL-GKFPFSDYDNEEIIEKLKQGQR------LPIPDNCPKDIYSLIQQCWSHDPEKRP  250 (259)
T ss_dssp             HHSEESHHHHHHHHHHHHHHHHTT-SSGTTTTSCHHHHHHHHHTTEE------TTSBTTSBHHHHHHHHHHT-SSGGGS-
T ss_pred             cccccccccccccccccccccccc-cccccccccccccccccccccc------ceeccchhHHHHHHHHHHcCCChhhCc
Confidence            988899999999999999999963 5689988887777776643321      112245688999999999999999999


Q ss_pred             CHHHHHHHH
Q psy4332         167 SFTEIHLFL  175 (188)
Q Consensus       167 s~~el~~~l  175 (188)
                      ++.++++.|
T Consensus       251 s~~~i~~~L  259 (259)
T PF07714_consen  251 SFQEILQEL  259 (259)
T ss_dssp             -HHHHHHHH
T ss_pred             CHHHHHhcC
Confidence            999998765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=2.5e-29  Score=189.78  Aligned_cols=152  Identities=24%  Similarity=0.334  Sum_probs=121.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......++..|+|||.+.
T Consensus       100 ~~~~qi~~al~~LH~~~ivHrdikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  169 (316)
T cd05619         100 FYAAEIICGLQFLHSKGIVYRDLKL--------DNILLDTDGHIKIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILL  169 (316)
T ss_pred             HHHHHHHHHHHHHHhCCeEeCCCCH--------HHEEECCCCCEEEccCCcceECCCCC--CceeeecCCccccCHHHHc
Confidence            3567899999999999999999999        99999999999999999976532221  1122345788899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  .|..||.+....+....+....       .......+.++.+++.+||..||++||+
T Consensus       170 ~~~~~~~~DvwslG~il~el~--~G~~pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~  240 (316)
T cd05619         170 GQKYNTSVDWWSFGVLLYEML--IGQSPFHGHDEEELFQSIRMDN-------PCYPRWLTREAKDILVKLFVREPERRLG  240 (316)
T ss_pred             CCCCCchhhhhhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCC-------CCCCccCCHHHHHHHHHHhccCHhhcCC
Confidence            888999999999999999999  5678998887766666554221       1112346788999999999999999999


Q ss_pred             HH-HH--HHHHHhc
Q psy4332         168 FT-EI--HLFLQRK  178 (188)
Q Consensus       168 ~~-el--~~~l~~~  178 (188)
                      +. ++  |++|+++
T Consensus       241 ~~~~l~~h~~~~~~  254 (316)
T cd05619         241 VKGDIRQHPFFREI  254 (316)
T ss_pred             ChHHHHcCcccCCC
Confidence            96 67  6677654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=1.8e-28  Score=180.49  Aligned_cols=155  Identities=34%  Similarity=0.612  Sum_probs=122.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.+||+|||++........ ........+..|++||.+.
T Consensus       108 ~~~~ql~~~l~~lH~~~i~H~dlkp--------~nil~~~~~~~kl~df~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  178 (263)
T cd05052         108 YMATQISSAMEYLEKKNFIHRDLAA--------RNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLA  178 (263)
T ss_pred             HHHHHHHHHHHHHHhCCEeecccCc--------ceEEEcCCCcEEeCCCcccccccccee-eccCCCCCccccCCHHHhc
Confidence            4567899999999999999999999        999999999999999999876643321 1112223356799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|+++| .|..||.+....+....+....      ........+.++.+++.+||..+|++||+
T Consensus       179 ~~~~~~~~Dv~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~  251 (263)
T cd05052         179 YNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKGY------RMERPEGCPPKVYELMRACWQWNPSDRPS  251 (263)
T ss_pred             cCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHCCC------CCCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence            8889999999999999999996 2678888877666655553221      11122456789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++.+.|+++
T Consensus       252 ~~~l~~~l~~~  262 (263)
T cd05052         252 FAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHHhh
Confidence            99999988764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=1.9e-29  Score=190.96  Aligned_cols=150  Identities=22%  Similarity=0.366  Sum_probs=120.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||+++......  .......|++.|+|||.+.
T Consensus       105 ~~~~qi~~aL~~LH~~~ivHrDlkp--------~Nill~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  174 (323)
T cd05616         105 FYAAEIAIGLFFLHSKGIIYRDLKL--------DNVMLDSEGHIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIA  174 (323)
T ss_pred             HHHHHHHHHHHHHHHCCEEecCCCH--------HHeEECCCCcEEEccCCCceecCCCC--CccccCCCChhhcCHHHhc
Confidence            3567899999999999999999999        99999999999999999986543221  1223455788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+||++|+++  +|..||.+.........+.....       ......+.++.+++.+||+.+|++|++
T Consensus       175 ~~~~~~~~DiwSlGvil~ell--tg~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~l~~~p~~R~~  245 (323)
T cd05616         175 YQPYGKSVDWWAFGVLLYEML--AGQAPFEGEDEDELFQSIMEHNV-------AYPKSMSKEAVAICKGLMTKHPGKRLG  245 (323)
T ss_pred             CCCCCCccchhchhHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCC-------CCCCcCCHHHHHHHHHHcccCHHhcCC
Confidence            888999999999999999999  56789998887777666653221       112356789999999999999999998


Q ss_pred             H-----HHH--HHHHH
Q psy4332         168 F-----TEI--HLFLQ  176 (188)
Q Consensus       168 ~-----~el--~~~l~  176 (188)
                      +     .++  |++++
T Consensus       246 ~~~~~~~~i~~h~~~~  261 (323)
T cd05616         246 CGPEGERDIKEHAFFR  261 (323)
T ss_pred             CCCCCHHHHhcCCCcC
Confidence            5     566  55554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.9e-29  Score=191.71  Aligned_cols=155  Identities=22%  Similarity=0.301  Sum_probs=123.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.....     ......+++.|+|||.+.+
T Consensus       106 ~~~qi~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~  172 (333)
T cd05600         106 YMAEMFEAVDALHELGYIHRDLKP--------ENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRG  172 (333)
T ss_pred             HHHHHHHHHHHHHHCCccccCCCH--------HHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcC
Confidence            456889999999999999999999        999999999999999999876543     2234557889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-cCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-YLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ..++.++||||+|+++|+|+  +|..||.+....+....+..+........ ..+....+.++.+++.+||..+|++||+
T Consensus       173 ~~~~~~~DvwslG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s  250 (333)
T cd05600         173 KGYDFTVDYWSLGCMLYEFL--CGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS  250 (333)
T ss_pred             CCCCCccceecchHHHhhhh--hCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC
Confidence            88999999999999999999  56889998877776665544322111111 1112345789999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      ++++  |+||.+.
T Consensus       251 ~~~ll~h~~~~~~  263 (333)
T cd05600         251 LEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHhCcccCCC
Confidence            9999  6777754

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=1.3e-28  Score=182.56  Aligned_cols=155  Identities=34%  Similarity=0.590  Sum_probs=120.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc---eEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF---EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.++.|+|+++++|+||||        +||+++.++   .+|++|||+++................+..|++||
T Consensus       120 ~~~~qi~~~l~~LH~~~ivH~dlkp--------~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  191 (277)
T cd05036         120 FCARDVAKGCKYLEENHFIHRDIAA--------RNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPE  191 (277)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccch--------heEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHH
Confidence            3677889999999999999999999        999998654   58999999987763322211122233356799999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||||+++++++| .|..||.+....+....+.....      .......+..+.+++.+||..+|++
T Consensus       192 ~~~~~~~~~~~DiwslG~il~el~~-~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~cl~~~p~~  264 (277)
T cd05036         192 AFLDGIFTSKTDVWSFGVLLWEIFS-LGYMPYPGRTNQEVMEFVTGGGR------LDPPKGCPGPVYRIMTDCWQHTPED  264 (277)
T ss_pred             HHhcCCcCchhHHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCCccc
Confidence            9988889999999999999999996 27889988776665554432211      1122456789999999999999999


Q ss_pred             CCCHHHHHHHHHh
Q psy4332         165 RPSFTEIHLFLQR  177 (188)
Q Consensus       165 Rps~~el~~~l~~  177 (188)
                      ||++.++.+.|++
T Consensus       265 Rps~~~vl~~l~~  277 (277)
T cd05036         265 RPNFATILERIQY  277 (277)
T ss_pred             CcCHHHHHHHhhC
Confidence            9999999888763

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.96  E-value=1.4e-28  Score=185.42  Aligned_cols=157  Identities=32%  Similarity=0.565  Sum_probs=123.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+|+||        +||+++.++.+||+|||+++...............++..|++||.+.+
T Consensus       139 ~~~qi~~aL~~lH~~gi~H~dlkp--------~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (314)
T cd05099         139 CAYQVARGMEYLESRRCIHRDLAA--------RNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD  210 (314)
T ss_pred             HHHHHHHHHHHHHHCCeeeccccc--------eeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc
Confidence            356899999999999999999999        999999999999999999876643222111122233457999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++++ |..||.+....+....+.....      .......+.++.+++.+||..+|++||++
T Consensus       211 ~~~~~~~DiwslG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~  283 (314)
T cd05099         211 RVYTHQSDVWSFGILMWEIFTL-GGSPYPGIPVEELFKLLREGHR------MDKPSNCTHELYMLMRECWHAVPTQRPTF  283 (314)
T ss_pred             CCcCccchhhHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence            8889999999999999999962 6789988777666665543211      11124567799999999999999999999


Q ss_pred             HHHHHHHHhccC
Q psy4332         169 TEIHLFLQRKNL  180 (188)
Q Consensus       169 ~el~~~l~~~~~  180 (188)
                      .++...|+++..
T Consensus       284 ~~ll~~l~~~~~  295 (314)
T cd05099         284 KQLVEALDKVLA  295 (314)
T ss_pred             HHHHHHHHHHHH
Confidence            999888887753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=3.3e-29  Score=189.70  Aligned_cols=151  Identities=19%  Similarity=0.284  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus       105 ~~~~qi~~al~~lH~~~ivHrdlkp--------~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~  174 (324)
T cd05589         105 FYAACVVLGLQYLHENKIVYRDLKL--------DNLLLDTEGFVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLT  174 (324)
T ss_pred             HHHHHHHHHHHHHHhCCeEecCCCH--------HHeEECCCCcEEeCcccCCccCCCCC--CcccccccCccccCHhHhc
Confidence            3567889999999999999999999        99999999999999999876543222  1223455788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++||||+|+++|+++  .|..||.+....+....+.....       ......+.++.+++.+||..||++|| 
T Consensus       175 ~~~~~~~~DiwslG~il~el~--~G~~pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~  245 (324)
T cd05589         175 ETSYTRAVDWWGLGVLIYEML--VGESPFPGDDEEEVFDSIVNDEV-------RYPRFLSREAISIMRRLLRRNPERRLG  245 (324)
T ss_pred             CCCCCcccchhhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCC-------CCCCCCCHHHHHHHHHHhhcCHhHcCC
Confidence            888999999999999999999  57889998877766666543221       11235678999999999999999999 


Q ss_pred             ----CHHHH--HHHHHh
Q psy4332         167 ----SFTEI--HLFLQR  177 (188)
Q Consensus       167 ----s~~el--~~~l~~  177 (188)
                          ++.++  |+|++.
T Consensus       246 ~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         246 SGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             CCCCCHHHHhhCCCcCC
Confidence                57777  556654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=2.2e-29  Score=190.70  Aligned_cols=151  Identities=22%  Similarity=0.385  Sum_probs=120.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......|++.|+|||.+.+
T Consensus       106 ~~~qi~~al~~lH~~~ivH~dlkp--------~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  175 (324)
T cd05587         106 YAAEIAIGLFFLHSKGIIYRDLKL--------DNVMLDAEGHIKIADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAY  175 (324)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCH--------HHeEEcCCCCEEEeecCcceecCCCC--CceeeecCCccccChhhhcC
Confidence            467889999999999999999999        99999999999999999976432221  12234457889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++|+++  +|..||.+....+....+.....       ......+.++.+++.+||..||++|++.
T Consensus       176 ~~~~~~~DiwslGvil~ell--tG~~pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         176 QPYGKSVDWWAFGVLLYEML--AGQPPFDGEDEDELFQSIMEHNV-------SYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCcccchhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            88899999999999999999  56789998877776666643221       1123467899999999999999999976


Q ss_pred             -----HHH--HHHHHhc
Q psy4332         169 -----TEI--HLFLQRK  178 (188)
Q Consensus       169 -----~el--~~~l~~~  178 (188)
                           +++  |+||+.+
T Consensus       247 ~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         247 GPTGERDIREHAFFRRI  263 (324)
T ss_pred             CCCCHHHHhcCCCcCCC
Confidence                 666  6666543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.96  E-value=1.7e-29  Score=191.59  Aligned_cols=151  Identities=18%  Similarity=0.237  Sum_probs=120.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||+++......  .......+++.|+|||.+.
T Consensus        99 ~~~~qi~~aL~~LH~~~ivHrDikp--------~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  168 (328)
T cd05593          99 FYGAEIVSALDYLHSGKIVYRDLKL--------ENLMLDKDGHIKITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLE  168 (328)
T ss_pred             HHHHHHHHHHHHHHhCCeEecccCH--------HHeEECCCCcEEEecCcCCccCCCcc--cccccccCCcCccChhhhc
Confidence            3567899999999999999999999        99999999999999999976542221  1223445788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++||||+|+++|+++  +|..||.+....+....+....       .......+.++.+++.+||..||++|+ 
T Consensus       169 ~~~~~~~~DiwslGvil~ell--tG~~Pf~~~~~~~~~~~~~~~~-------~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (328)
T cd05593         169 DNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHEKLFELILMED-------IKFPRTLSADAKSLLSGLLIKDPNKRLG  239 (328)
T ss_pred             CCCCCccCCccccchHHHHHh--hCCCCCCCCCHHHHHHHhccCC-------ccCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence            888999999999999999999  5678998877666555443211       112245678999999999999999997 


Q ss_pred             ----CHHHH--HHHHHh
Q psy4332         167 ----SFTEI--HLFLQR  177 (188)
Q Consensus       167 ----s~~el--~~~l~~  177 (188)
                          ++.++  |+||..
T Consensus       240 ~~~~~~~~il~h~~~~~  256 (328)
T cd05593         240 GGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             CCCCCHHHHhcCCCcCC
Confidence                88998  566643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=4.4e-29  Score=190.34  Aligned_cols=160  Identities=18%  Similarity=0.205  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        .||+++.++.+||+|||++......     .....++..|+|||.+.
T Consensus       122 ~i~~qi~~aL~~LH~~~ivHrdikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~  188 (343)
T cd07878         122 FLIYQLLRGLKYIHSAGIIHRDLKP--------SNVAVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIML  188 (343)
T ss_pred             HHHHHHHHHHHHHHHCCeecccCCh--------hhEEECCCCCEEEcCCccceecCCC-----cCCccccccccCchHhc
Confidence            3567899999999999999999999        9999999999999999998765332     12345788899999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----------------cccCC-------
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----------------FIYLP-------  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~-------  142 (188)
                      + ..++.++||||+|+++|+++  .|..||.+....+....+.........                 ....+       
T Consensus       189 ~~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (343)
T cd07878         189 NWMHYNQTVDIWSVGCIMAELL--KGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKI  266 (343)
T ss_pred             CCccCCchhhhHhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHh
Confidence            6 45788999999999999999  567888776544443333221110000                 00000       


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~  182 (188)
                      ....++.+.+++.+||..||++|||++|+  |+||.+.....
T Consensus       267 ~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~  308 (343)
T cd07878         267 FRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE  308 (343)
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence            11235568899999999999999999999  89998765543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-28  Score=182.43  Aligned_cols=155  Identities=38%  Similarity=0.678  Sum_probs=122.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+|+||        .||+++.++.+||+|||+++...............++..|+|||.+.
T Consensus       123 ~~~~~i~~~l~~lH~~~i~H~di~p--------~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05032         123 QMAAEIADGMAYLAAKKFVHRDLAA--------RNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (277)
T ss_pred             HHHHHHHHHHHHHHhCCccccccCh--------heEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh
Confidence            3567899999999999999999999        99999999999999999987664433222223334567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++|. +..||.+....+....+....     . .......+.++.+++.+||..+|++|||
T Consensus       195 ~~~~~~~~Di~slG~il~el~t~-g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt  267 (277)
T cd05032         195 DGVFTTKSDVWSFGVVLWEMATL-AEQPYQGLSNEEVLKFVIDGG-----H-LDLPENCPDKLLELMRMCWQYNPKMRPT  267 (277)
T ss_pred             cCCCCcccchHHHHHHHHHhhcc-CCCCCccCCHHHHHHHHhcCC-----C-CCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence            88889999999999999999952 678998877666555444211     1 1112345789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +.++...|++
T Consensus       268 ~~~l~~~l~~  277 (277)
T cd05032         268 FLEIVSSLKD  277 (277)
T ss_pred             HHHHHHHhcC
Confidence            9999888763

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.96  E-value=1.8e-29  Score=192.26  Aligned_cols=149  Identities=17%  Similarity=0.169  Sum_probs=122.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+||||||        +||+++.++.+||+|||++......     .....||+.|+|||++.
T Consensus       135 ~~~~qi~~aL~~LH~~~ivHrDLkp--------~NILl~~~~~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~  201 (340)
T PTZ00426        135 FYAAQIVLIFEYLQSLNIVYRDLKP--------ENLLLDKDGFIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILL  201 (340)
T ss_pred             HHHHHHHHHHHHHHHCCeEccCCCH--------HHEEECCCCCEEEecCCCCeecCCC-----cceecCChhhcCHHHHh
Confidence            3567889999999999999999999        9999999999999999998765322     12445788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++|+||+||++|+++  .|..||.+.........+.....       ......+..+.+++.+||+.||++|+ 
T Consensus       202 ~~~~~~~~DiwSlGvil~ell--~G~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~l~~dp~~R~~  272 (340)
T PTZ00426        202 NVGHGKAADWWTLGIFIYEIL--VGCPPFYANEPLLIYQKILEGII-------YFPKFLDNNCKHLMKKLLSHDLTKRYG  272 (340)
T ss_pred             CCCCCccccccchhhHHHHHh--cCCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCHHHHHHHHHHcccCHHHcCC
Confidence            888899999999999999999  67889998877666665543221       11244678899999999999999995 


Q ss_pred             ----CHHHH--HHHHHhc
Q psy4332         167 ----SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ----s~~el--~~~l~~~  178 (188)
                          +++++  |+||+.+
T Consensus       273 ~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        273 NLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CCCCCHHHHHcCCCcCCC
Confidence                89999  7787754

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.96  E-value=2.1e-28  Score=179.79  Aligned_cols=157  Identities=30%  Similarity=0.620  Sum_probs=121.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~   85 (188)
                      ..+.+++.++.|+|+++++|+|+||        .||+++.++.+||+|||++.........  .......++..|+|||.
T Consensus       102 ~~~~~i~~~l~~lH~~~i~H~dlk~--------~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (262)
T cd05058         102 GFGLQVAKGMEYLASKKFVHRDLAA--------RNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALES  173 (262)
T ss_pred             HHHHHHHHHHHHHHhCCccccccCc--------ceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhH
Confidence            3456899999999999999999999        9999999999999999998755332211  11123334567999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||||+++++++++ +..||......+....+....     . .......+..+.+++.+||..+|++|
T Consensus       174 ~~~~~~~~~~Di~slG~~l~el~~~-~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~cl~~~p~~R  246 (262)
T cd05058         174 LQTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVDSFDITVYLLQGR-----R-LLQPEYCPDPLYEVMLSCWHPKPEMR  246 (262)
T ss_pred             hccCccchHHHHHHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHhcCC-----C-CCCCCcCCHHHHHHHHHHcCCChhhC
Confidence            9888899999999999999999963 567777766655554443221     1 11123457789999999999999999


Q ss_pred             CCHHHHHHHHHhcc
Q psy4332         166 PSFTEIHLFLQRKN  179 (188)
Q Consensus       166 ps~~el~~~l~~~~  179 (188)
                      |++.++...|+++.
T Consensus       247 p~~~~il~~l~~~~  260 (262)
T cd05058         247 PTFSELVSRIEQIF  260 (262)
T ss_pred             CCHHHHHHHHHHHh
Confidence            99999999988764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=4.7e-29  Score=185.25  Aligned_cols=155  Identities=14%  Similarity=0.188  Sum_probs=118.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++........  ......+++.|+|||.+.+
T Consensus       102 ~~~qi~~~l~~lH~~~i~H~dlkp--------~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~  171 (280)
T cd05608         102 YTAQIISGLEHLHQRRIIYRDLKP--------ENVLLDNDGNVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQG  171 (280)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcC
Confidence            567889999999999999999999        999999999999999999876543321  1223457889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++|+||+|+++|+++  .|..||...........+.......   .......++.++.+++.+||+.||++||  
T Consensus       172 ~~~~~~~DvwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (280)
T cd05608         172 EEYDFSVDYFALGVTLYEMI--AARGPFRARGEKVENKELKQRILND---SVTYPDKFSPASKSFCEALLAKDPEKRLGF  246 (280)
T ss_pred             CCCCccccHHHHHHHHHHHH--hCCCCCCCCCcchhHHHHHHhhccc---CCCCcccCCHHHHHHHHHHhcCCHHHhcCC
Confidence            88999999999999999999  5678887653221111111111001   1112245788999999999999999999  


Q ss_pred             ---CHHHH--HHHHHhc
Q psy4332         167 ---SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ---s~~el--~~~l~~~  178 (188)
                         +++++  |+||++.
T Consensus       247 ~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         247 RDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             CCCCHHHHhcChhhhcC
Confidence               77888  8899875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=1.4e-28  Score=186.88  Aligned_cols=157  Identities=22%  Similarity=0.351  Sum_probs=118.9

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++ +|+|+||||        .||+++.++.+||+|||++......    ......++..|+|||.+
T Consensus       107 ~~~~~i~~~l~~lH~~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~  174 (331)
T cd06649         107 KVSIAVLRGLAYLREKHQIMHRDVKP--------SNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL  174 (331)
T ss_pred             HHHHHHHHHHHHHhhcCCEEcCCCCh--------hhEEEcCCCcEEEccCccccccccc----ccccCCCCcCcCCHhHh
Confidence            4566788999999975 699999999        9999999999999999998765332    22344578899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC--------------------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD--------------------------------  134 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~--------------------------------  134 (188)
                      .+..++.++||||+|+++|+++  +|..||......+....+......                                
T Consensus       175 ~~~~~~~~~DiwslG~il~el~--tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (331)
T cd06649         175 QGTHYSVQSDIWSMGLSLVELA--IGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMA  252 (331)
T ss_pred             cCCCCCchHhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchh
Confidence            8888999999999999999999  567898766554433222110000                                


Q ss_pred             ---------CCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         135 ---------DGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       135 ---------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                               .......+...++.++.+|+.+||+.||++||+++++  |+||++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         253 IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                     0000111123457889999999999999999999999  8888754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.3e-29  Score=195.06  Aligned_cols=163  Identities=16%  Similarity=0.137  Sum_probs=119.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+|+.|+.|+|++||+||||||        +||+++.++.++|+|||++................++..|+|||++
T Consensus       188 ~~i~~ql~~aL~~LH~~givHrDlkp--------~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  259 (392)
T PHA03207        188 ITIQRRLLEALAYLHGRGIIHRDVKT--------ENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELL  259 (392)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCH--------HHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHh
Confidence            34667899999999999999999999        9999999999999999998766544332333445688999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH---HHHHHhhcccCCC---------------------CCcc--c
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL---EVLENISHLHADD---------------------GEFI--Y  140 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~---~~~~~~~~~~~~~---------------------~~~~--~  140 (188)
                      .+..++.++||||+||++|+++  .|..||.+....   .....+.......                     ....  .
T Consensus       260 ~~~~~~~~~DvwslGvil~el~--~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (392)
T PHA03207        260 ALDPYCAKTDIWSAGLVLFEMS--VKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT  337 (392)
T ss_pred             cCCCCCchhhHHHHHHHHHHHH--HCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc
Confidence            8888999999999999999999  456788654311   1111111100000                     0000  0


Q ss_pred             ----CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         141 ----LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       141 ----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                          .....++.++.+++.+||..||++||++.|+  |+||++..
T Consensus       338 ~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        338 IPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             ccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence                0012345678999999999999999999998  88887653

>KOG1094|consensus

Probab=99.96  E-value=5e-29  Score=192.35  Aligned_cols=163  Identities=45%  Similarity=0.865  Sum_probs=144.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ++|.+|+.++.||.+-+++|||+-+        .|+|++.++++||+|||.++..-.+..++..+....+.+|||+|.+.
T Consensus       641 si~tqiasgmaYLes~nfVHrd~a~--------rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsil  712 (807)
T KOG1094|consen  641 SICTQIASGMAYLESLNFVHRDLAT--------RNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESIL  712 (807)
T ss_pred             HHHHHHHHHHHHHHhhchhhccccc--------cceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHH
Confidence            4789999999999999999999999        99999999999999999999887776677777777888999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCC-CCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT-PQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .++++.++|+|+||+.+||+++.++..||......+..+........++....... +.++..+.++|.+||..|.++||
T Consensus       713 lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RP  792 (807)
T KOG1094|consen  713 LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRP  792 (807)
T ss_pred             hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCC
Confidence            99999999999999999999998999999999888888877666555555544433 45688999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      +++++|.+|++.
T Consensus       793 sFe~lh~~lq~~  804 (807)
T KOG1094|consen  793 SFEQLHLFLQED  804 (807)
T ss_pred             CHHHHHHHHHHh
Confidence            999999999875

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.96  E-value=2.2e-29  Score=190.65  Aligned_cols=151  Identities=18%  Similarity=0.240  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus        99 ~~~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  168 (323)
T cd05595          99 FYGAEIVSALEYLHSRDVVYRDIKL--------ENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLE  168 (323)
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCH--------HHEEEcCCCCEEecccHHhccccCCC--CccccccCCcCcCCccccc
Confidence            4567899999999999999999999        99999999999999999876532221  1223455788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++||||+|+++|+++  +|..||.+.........+.....       .....++.++.+++.+||..||++|+ 
T Consensus       169 ~~~~~~~~DiwSlGvil~ell--~g~~Pf~~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05595         169 DNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             CCCCCchhchhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCHHHHHHHHHHccCCHHHhCC
Confidence            888999999999999999999  56789988776666555542211       11245678999999999999999998 


Q ss_pred             ----CHHHH--HHHHHh
Q psy4332         167 ----SFTEI--HLFLQR  177 (188)
Q Consensus       167 ----s~~el--~~~l~~  177 (188)
                          ++.++  |+||..
T Consensus       240 ~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         240 GGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             CCCCCHHHHHcCCCcCC
Confidence                88888  666654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0600|consensus

Probab=99.96  E-value=4.2e-29  Score=189.64  Aligned_cols=158  Identities=21%  Similarity=0.239  Sum_probs=129.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .+..||+.|+.|+|++||+|||||.        .|||++.+|.+||+|||+++...... .........|.+|.|||++.
T Consensus       222 c~mkQLl~Gl~~cH~~gvlHRDIK~--------SNiLidn~G~LKiaDFGLAr~y~~~~-~~~~T~rVvTLWYRpPELLL  292 (560)
T KOG0600|consen  222 CYMKQLLEGLEYCHSRGVLHRDIKG--------SNILIDNNGVLKIADFGLARFYTPSG-SAPYTSRVVTLWYRPPELLL  292 (560)
T ss_pred             HHHHHHHHHHHHHhhcCeeeccccc--------cceEEcCCCCEEeccccceeeccCCC-CcccccceEEeeccChHHhc
Confidence            3456899999999999999999999        99999999999999999998664333 23345666799999999999


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccC----C------------------CC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL----P------------------TP  144 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~------------------~~  144 (188)
                      +. .|+...|+||.||++.||+  .|.+.|++..+.++.+.|.+....+......    +                  ..
T Consensus       293 G~t~Yg~aVDlWS~GCIl~El~--~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~  370 (560)
T KOG0600|consen  293 GATSYGTAVDLWSVGCILAELF--LGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK  370 (560)
T ss_pred             CCcccccceeehhhhHHHHHHH--cCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence            76 4899999999999999999  7789999999999888887544333222111    0                  12


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHH
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~  176 (188)
                      .++....+|+..+|..||++|.|+.++  ++||.
T Consensus       371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  371 DFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             cCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence            346789999999999999999999998  67773

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=2.3e-28  Score=183.02  Aligned_cols=155  Identities=35%  Similarity=0.563  Sum_probs=120.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   .......+..|++||.+.
T Consensus       123 ~i~~qi~~al~~lH~~~ivH~dlkp--------~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  191 (297)
T cd05089         123 QFASDVATGMQYLSEKQFIHRDLAA--------RNVLVGENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLN  191 (297)
T ss_pred             HHHHHHHHHHHHHHHCCcccCcCCc--------ceEEECCCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhc
Confidence            4567788999999999999999999        99999999999999999876432211   111222345699999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|+++| .|..||.+....+....+....     . .......+..+.+++.+||..+|.+||+
T Consensus       192 ~~~~~~~~DvwSlG~il~el~t-~g~~pf~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~  264 (297)
T cd05089         192 YSVYTTKSDVWSFGVLLWEIVS-LGGTPYCGMTCAELYEKLPQGY-----R-MEKPRNCDDEVYELMRQCWRDRPYERPP  264 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHhcCC-----C-CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            8888999999999999999995 2678998887666665543221     1 1122346789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      ++++...|.++-.
T Consensus       265 ~~~i~~~l~~~~~  277 (297)
T cd05089         265 FAQISVQLSRMLE  277 (297)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999777776644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.96  E-value=4.4e-28  Score=180.67  Aligned_cols=160  Identities=37%  Similarity=0.647  Sum_probs=124.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+|+||        +||+++.++.++++|||+++...............++..|++||.+.
T Consensus       123 ~~~~~l~~~l~~lH~~~i~H~dikp--------~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  194 (288)
T cd05061         123 QMAAEIADGMAYLNAKKFVHRDLAA--------RNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (288)
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCCCh--------heEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhc
Confidence            3567889999999999999999999        99999999999999999987654332212222233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++++ +..||.+....+....+.....      .......+..+.+++.+||..+|++||+
T Consensus       195 ~~~~~~~~DvwslG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps  267 (288)
T cd05061         195 DGVFTTSSDMWSFGVVLWEITSL-AEQPYQGLSNEQVLKFVMDGGY------LDQPDNCPERVTDLMRMCWQFNPKMRPT  267 (288)
T ss_pred             cCCCChHhHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence            88889999999999999999962 5789988776665555442211      1112345678999999999999999999


Q ss_pred             HHHHHHHHHhccCCC
Q psy4332         168 FTEIHLFLQRKNLGY  182 (188)
Q Consensus       168 ~~el~~~l~~~~~~~  182 (188)
                      +.++.+.|++.-...
T Consensus       268 ~~~ll~~l~~~~~~~  282 (288)
T cd05061         268 FLEIVNLLKDDLHPS  282 (288)
T ss_pred             HHHHHHHHHhhcCCC
Confidence            999999888764433

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=3.5e-29  Score=189.53  Aligned_cols=150  Identities=21%  Similarity=0.328  Sum_probs=120.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||+++.......  ......+++.|+|||.+.+
T Consensus       105 ~~~qi~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~  174 (323)
T cd05584         105 YLSEISLALEHLHQQGIIYRDLKP--------ENILLDAQGHVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMR  174 (323)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCH--------HHeEECCCCCEEEeeCcCCeecccCCC--cccccCCCccccChhhccC
Confidence            456889999999999999999999        999999999999999999765432221  1233457889999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++||||+|+++|+++  +|..||.+.........+.....       ......+.++.+++.+||+.+|++||  
T Consensus       175 ~~~~~~~DiwslG~il~ell--~G~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~  245 (323)
T cd05584         175 SGHGKAVDWWSLGALMYDML--TGAPPFTAENRKKTIDKILKGKL-------NLPPYLTPEARDLLKKLLKRNPSSRLGA  245 (323)
T ss_pred             CCCCCcceecccHHHHHHHh--cCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHcccCHhHcCCC
Confidence            88889999999999999999  67889988876666655543211       11244678999999999999999999  


Q ss_pred             ---CHHHH--HHHHHh
Q psy4332         167 ---SFTEI--HLFLQR  177 (188)
Q Consensus       167 ---s~~el--~~~l~~  177 (188)
                         +++++  |+|+..
T Consensus       246 ~~~~~~~l~~h~~~~~  261 (323)
T cd05584         246 GPGDAAEVQSHPFFRH  261 (323)
T ss_pred             CCCCHHHHhcCCCcCC
Confidence               78888  666653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.4e-29  Score=192.20  Aligned_cols=157  Identities=25%  Similarity=0.342  Sum_probs=124.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc---------------------
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD---------------------   66 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~---------------------   66 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......                     
T Consensus       105 ~i~~qi~~aL~~LH~~giiH~Dlkp--------~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (350)
T cd05573         105 FYIAELVLALDSVHKLGFIHRDIKP--------DNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR  176 (350)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCH--------HHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccc
Confidence            3567899999999999999999999        99999999999999999987664332                     


Q ss_pred             ------cccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc
Q psy4332          67 ------YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY  140 (188)
Q Consensus        67 ------~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  140 (188)
                            .........+++.|+|||.+.+..++.++||||+||++|+|+  +|..||.+.........+..+...   ...
T Consensus       177 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell--~g~~Pf~~~~~~~~~~~i~~~~~~---~~~  251 (350)
T cd05573         177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML--YGFPPFYSDTLQETYNKIINWKES---LRF  251 (350)
T ss_pred             ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhc--cCCCCCCCCCHHHHHHHHhccCCc---ccC
Confidence                  001223455788999999999888999999999999999999  678899988876666666543211   112


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCC-HHHH--HHHHHhc
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPS-FTEI--HLFLQRK  178 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps-~~el--~~~l~~~  178 (188)
                      ......+.++.+++.+|+. ||.+||+ ++++  |+|++.+
T Consensus       252 p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         252 PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            2223368899999999997 9999999 9999  7777654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=5.1e-29  Score=188.27  Aligned_cols=151  Identities=21%  Similarity=0.330  Sum_probs=120.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........  ......++..|+|||.+.+
T Consensus       101 ~~~qi~~~l~~LH~~~ivH~dlkp--------~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~  170 (318)
T cd05570         101 YAAEIVLGLQFLHERGIIYRDLKL--------DNVLLDSEGHIKIADFGMCKEGILGGV--TTSTFCGTPDYIAPEILSY  170 (318)
T ss_pred             HHHHHHHHHHHHHhCCeEccCCCH--------HHeEECCCCcEEecccCCCeecCcCCC--cccceecCccccCHHHhcC
Confidence            456889999999999999999999        999999999999999998764322211  1123457888999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++|+++  +|..||.+.........+.....       ......+.++.+++.+||..||++||++
T Consensus       171 ~~~~~~~DiwslGvil~~l~--~G~~pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         171 QPYGPAVDWWALGVLLYEML--AGQSPFEGDDEDELFQSILEDEV-------RYPRWLSKEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             CCCCcchhhhhHHHHHHHHh--hCCCCCCCCCHHHHHHHHHcCCC-------CCCCcCCHHHHHHHHHHccCCHHHcCCC
Confidence            88999999999999999999  56789988877666665543211       1123467899999999999999999999


Q ss_pred             -----HHH--HHHHHhc
Q psy4332         169 -----TEI--HLFLQRK  178 (188)
Q Consensus       169 -----~el--~~~l~~~  178 (188)
                           .++  |+|+...
T Consensus       242 ~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         242 LPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCCHHHHhcCCCcCCC
Confidence                 888  5666543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=8.7e-29  Score=190.69  Aligned_cols=159  Identities=20%  Similarity=0.277  Sum_probs=120.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........ .......++..|+|||.+.+
T Consensus       108 ~~~qi~~aL~~LH~~~ivH~dlkp--------~Nili~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         108 FLYQILRGLKYLHSAGILHRDIKP--------GNLLVNSNCVLKICDFGLARVEEPDES-KHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCCh--------HHEEECCCCCEEeccccceeecccCcc-ccCCCCCcCCCcCCHHHHcC
Confidence            467899999999999999999999        999999999999999999875432211 12223456788999999876


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC--------------------Cc-----ccCC
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG--------------------EF-----IYLP  142 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~-----~~~~  142 (188)
                      . .++.++||||+||++++++  +|..||.+.........+........                    ..     ....
T Consensus       179 ~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (372)
T cd07853         179 SRHYTSAVDIWSVGCIFAELL--GRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTL  256 (372)
T ss_pred             CCCCCcHHHHHhHHHHHHHHH--cCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhccc
Confidence            4 4788999999999999999  67889988776555444432111100                    00     0011


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ....+.++.+++.+||+.||++|||+.|+  |+||+..
T Consensus       257 ~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         257 SSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            23347789999999999999999999999  7888864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.96  E-value=3.1e-28  Score=182.75  Aligned_cols=157  Identities=29%  Similarity=0.531  Sum_probs=121.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        +||+++.++.+||+|||++................++..|++||.+.
T Consensus       113 ~~~~qi~~~L~~LH~~~ivH~dikp--------~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         113 NWCVQIAKGMMYLEERRLVHRDLAA--------RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             HHHHHHHHHHHHHhhcCeecccccc--------ceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhc
Confidence            4567889999999999999999999        99999999999999999987664332211222333456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|+++| .+..||.+....+....+....     . .......+.++.+++.+||..+|++||+
T Consensus       185 ~~~~~~~~DiwslG~~l~el~t-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~c~~~~p~~Rp~  257 (303)
T cd05110         185 YRKFTHQSDVWSYGVTIWELMT-FGGKPYDGIPTREIPDLLEKGE-----R-LPQPPICTIDVYMVMVKCWMIDADSRPK  257 (303)
T ss_pred             cCCCChHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHCCC-----C-CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            8889999999999999999986 3678888776554443332211     1 1112345678999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++...|+++.
T Consensus       258 ~~~l~~~l~~~~  269 (303)
T cd05110         258 FKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHHHHHHH
Confidence            999988877664

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.96  E-value=2.9e-28  Score=179.03  Aligned_cols=153  Identities=28%  Similarity=0.561  Sum_probs=122.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|+++++|+|+||        +||+++.++.++++|||++........ .......++..|+|||.+.+
T Consensus       108 ~~~~l~~~l~~LH~~~i~H~dl~p--------~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05072         108 FSAQIAEGMAYIERKNYIHRDLRA--------ANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINF  178 (261)
T ss_pred             HHHHHHHHHHHHHHCCeeccccch--------hhEEecCCCcEEECCCccceecCCCce-eccCCCccceecCCHHHhcc
Confidence            456889999999999999999999        999999999999999999876643321 11223335567999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++|+++|+ |..||.+.........+....      ........+.++.+++.+||..+|++||++
T Consensus       179 ~~~~~~~Di~slG~~l~~l~t~-g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (261)
T cd05072         179 GSFTIKSDVWSFGILLYEIVTY-GKIPYPGMSNSDVMSALQRGY------RMPRMENCPDELYDIMKTCWKEKAEERPTF  251 (261)
T ss_pred             CCCChhhhhhhhHHHHHHHHcc-CCCCCCCCCHHHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHccCCcccCcCH
Confidence            8889999999999999999952 678998877666665554321      111224567899999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      +++.+.|++
T Consensus       252 ~~i~~~l~~  260 (261)
T cd05072         252 DYLQSVLDD  260 (261)
T ss_pred             HHHHHHHhc
Confidence            999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=2.8e-29  Score=190.01  Aligned_cols=149  Identities=19%  Similarity=0.282  Sum_probs=119.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.|+.|+|++||+|+||||        .||+++.++.+||+|||++.......  .......+++.|+|||.+.+
T Consensus       101 ~~~qi~~~l~~lH~~givH~dikp--------~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  170 (323)
T cd05575         101 YAAEIASALGYLHSLNIIYRDLKP--------ENILLDSQGHVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRK  170 (323)
T ss_pred             HHHHHHHHHHHHHHCCeEeCCCCH--------HHeEECCCCcEEEeccCCCcccccCC--CccccccCChhhcChhhhcC
Confidence            567899999999999999999999        99999999999999999986543222  12234457889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  .|..||.+....+....+.....       ...+..+..+.+++.+||+.||++||++
T Consensus       171 ~~~~~~~DvwslG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~  241 (323)
T cd05575         171 QPYDRTVDWWCLGAVLYEML--YGLPPFYSRDTAEMYDNILNKPL-------RLKPNISVSARHLLEGLLQKDRTKRLGA  241 (323)
T ss_pred             CCCCccccccccchhhhhhh--cCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHhCCCC
Confidence            88999999999999999999  67889998877666666543211       1123457899999999999999999987


Q ss_pred             ----HHH--HHHHH
Q psy4332         169 ----TEI--HLFLQ  176 (188)
Q Consensus       169 ----~el--~~~l~  176 (188)
                          .++  |+||.
T Consensus       242 ~~~~~~il~~~~~~  255 (323)
T cd05575         242 KDDFLEIKNHVFFS  255 (323)
T ss_pred             CCCHHHHHcCCCcC
Confidence                455  55654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=7.8e-29  Score=189.74  Aligned_cols=156  Identities=17%  Similarity=0.253  Sum_probs=115.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......++..|++||.+.
T Consensus       172 ~i~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  241 (353)
T PLN00034        172 DVARQILSGIAYLHRRHIVHRDIKP--------SNLLINSAKNVKIADFGVSRILAQTM--DPCNSSVGTIAYMSPERIN  241 (353)
T ss_pred             HHHHHHHHHHHHHHHCCEeecCCCH--------HHEEEcCCCCEEEcccccceeccccc--ccccccccCccccCccccc
Confidence            4677899999999999999999999        99999999999999999987654321  1223456788999999874


Q ss_pred             c-----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 L-----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 ~-----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .     ...+.++|||||||++|+++  .|..||......+...........   .........+.++.+++.+||..||
T Consensus       242 ~~~~~~~~~~~~~DvwslGvil~el~--~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~P  316 (353)
T PLN00034        242 TDLNHGAYDGYAGDIWSLGVSILEFY--LGRFPFGVGRQGDWASLMCAICMS---QPPEAPATASREFRHFISCCLQREP  316 (353)
T ss_pred             cccccCcCCCcchhHHHHHHHHHHHH--hCCCCCCCCCCccHHHHHHHHhcc---CCCCCCCccCHHHHHHHHHHccCCh
Confidence            3     22356899999999999999  567888743322221111111100   0111224567899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhc
Q psy4332         163 TERPSFTEI--HLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~  178 (188)
                      ++||++.|+  |+||.+.
T Consensus       317 ~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        317 AKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             hhCcCHHHHhcCcccccC
Confidence            999999999  7888765

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=4.1e-28  Score=178.29  Aligned_cols=154  Identities=32%  Similarity=0.564  Sum_probs=122.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++|+|||++........ .......++..|++||...
T Consensus       106 ~~~~~l~~al~~lH~~~i~H~dl~~--------~Nill~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~  176 (260)
T cd05069         106 DMAAQIADGMAYIERMNYIHRDLRA--------ANILVGDNLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             HHHHHHHHHHHHHHhCCEeecccCc--------ceEEEcCCCeEEECCCccceEccCCcc-cccCCCccchhhCCHHHhc
Confidence            3567889999999999999999999        999999999999999999876533221 1112233556799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++|+||+|+++|+++| .|..||.+....+....+.....      .......+..+.+++.+||..||++||+
T Consensus       177 ~~~~~~~~Di~slG~~l~el~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~  249 (260)
T cd05069         177 YGRFTIKSDVWSFGILLTELVT-KGRVPYPGMVNREVLEQVERGYR------MPCPQGCPESLHELMKLCWKKDPDERPT  249 (260)
T ss_pred             cCCcChHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCcccCHHHHHHHHHHccCCcccCcC
Confidence            8889999999999999999996 26789988776666555433211      1112346789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      ++++.++|++
T Consensus       250 ~~~i~~~l~~  259 (260)
T cd05069         250 FEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHhc
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.96  E-value=3.9e-28  Score=180.84  Aligned_cols=155  Identities=35%  Similarity=0.716  Sum_probs=122.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++++|+||||        .||+++.++.++++|||++.................+..|++||.+.
T Consensus       134 ~~~~~i~~aL~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (288)
T cd05050         134 CIAKQVAAGMAYLSERKFVHRDLAT--------RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF  205 (288)
T ss_pred             HHHHHHHHHHHHHHhCCeecccccH--------hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh
Confidence            4778899999999999999999999        99999999999999999977553322112222233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .+..||.+....+....+.....     . ......+.++.+++.+||..+|++||+
T Consensus       206 ~~~~~~~~Dv~slG~il~el~~-~~~~p~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~l~~li~~~l~~~p~~Rpt  278 (288)
T cd05050         206 YNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNV-----L-SCPDNCPLELYNLMRLCWSKLPSDRPS  278 (288)
T ss_pred             cCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHhcCCC-----C-CCCCCCCHHHHHHHHHHcccCcccCCC
Confidence            8889999999999999999995 26678888776666655543211     1 112346789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +.|+...|++
T Consensus       279 ~~el~~~l~~  288 (288)
T cd05050         279 FASINRILQR  288 (288)
T ss_pred             HHHHHHHhhC
Confidence            9999988874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.96  E-value=3.9e-28  Score=179.03  Aligned_cols=156  Identities=27%  Similarity=0.496  Sum_probs=122.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ...+.+++.|+.|+|++|++|+|+||        .||+++.++.++++|||.+......... ......++..|+|||.+
T Consensus       110 ~~~~~~i~~al~~lH~~~iiH~dikp--------~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~  180 (266)
T cd05064         110 MGMLPGLASGMKYLSEMGYVHKGLAA--------HKVLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAI  180 (266)
T ss_pred             HHHHHHHHHHHHHHHHCCEeeccccH--------hhEEEcCCCcEEECCCcccccccccchh-cccCCCCceeecCHHHH
Confidence            35567889999999999999999999        9999999999999999986554322111 11122345679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|++++++++ .|..||.+....+....+.....      ......++..+.+++.+||..+|++||
T Consensus       181 ~~~~~~~~~Di~slG~~l~ell~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~c~~~~p~~RP  253 (266)
T cd05064         181 QYHHFSSASDVWSFGIVMWEVMS-YGERPYWDMSGQDVIKAVEDGFR------LPAPRNCPNLLHQLMLDCWQKERGERP  253 (266)
T ss_pred             hhCCccchhHHHHHHHHHHHHhc-CCCCCcCcCCHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHcCCCchhCC
Confidence            88889999999999999999875 37889988877666555543211      112345678999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      +++++.+.|+++
T Consensus       254 ~~~~i~~~l~~~  265 (266)
T cd05064         254 RFSQIHSILSKM  265 (266)
T ss_pred             CHHHHHHHHHhh
Confidence            999998887653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=9.3e-29  Score=186.04  Aligned_cols=160  Identities=18%  Similarity=0.252  Sum_probs=119.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......++..|+|||.+.
T Consensus       108 ~~~~qi~~aL~~lH~~~ivH~dlkp--------~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  177 (309)
T cd07872         108 IFLYQILRGLAYCHRRKVLHRDLKP--------QNLLINERGELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLL  177 (309)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCCEEECccccceecCCCc--cccccccccccccCCHHHh
Confidence            3567899999999999999999999        99999999999999999986543322  1222345677899999986


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----------------------cccCCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----------------------FIYLPT  143 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~  143 (188)
                      + ..++.++||||+|+++++++  +|..||.+....+....+.........                       ......
T Consensus       178 ~~~~~~~~~DiwslG~il~el~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (309)
T cd07872         178 GSSEYSTQIDMWGVGCIFFEMA--SGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHA  255 (309)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhc
Confidence            5 35788999999999999999  567888876654443333221110000                       000011


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      +..+.++.+++.+||..||++|||+.|+  |+||+.+.
T Consensus       256 ~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         256 PRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             cCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            2457789999999999999999999999  88999764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=3.5e-28  Score=178.12  Aligned_cols=155  Identities=40%  Similarity=0.689  Sum_probs=125.5

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.++|++|++|+|+||        .||+++.++.++|+|||.+................++..|+|||.+
T Consensus       108 ~~~~~~l~~al~~lH~~~i~H~di~p--------~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (262)
T cd00192         108 LSFAIQIAKGMEYLASKKFVHRDLAA--------RNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESL  179 (262)
T ss_pred             HHHHHHHHHHHHHHHcCCcccCccCc--------ceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHh
Confidence            35677889999999999999999999        9999999999999999998776544322333445567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++++++++ |..||......+....+....     . .......+.++.+++.+||..+|++||
T Consensus       180 ~~~~~~~~~Di~slG~il~~l~~~-g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (262)
T cd00192         180 KDGIFTSKSDVWSFGVLLWEIFTL-GATPYPGLSNEEVLEYLRKGY-----R-LPKPEYCPDELYELMLSCWQLDPEDRP  252 (262)
T ss_pred             ccCCcchhhccHHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC-----C-CCCCccCChHHHHHHHHHccCCcccCc
Confidence            887889999999999999999963 588998887777666665311     1 111234578999999999999999999


Q ss_pred             CHHHHHHHHH
Q psy4332         167 SFTEIHLFLQ  176 (188)
Q Consensus       167 s~~el~~~l~  176 (188)
                      ++.++...|+
T Consensus       253 s~~~l~~~l~  262 (262)
T cd00192         253 TFSELVERLE  262 (262)
T ss_pred             CHHHHHHhhC
Confidence            9999987763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=4e-28  Score=178.18  Aligned_cols=156  Identities=25%  Similarity=0.500  Sum_probs=122.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++|++|+||||        .||+++.++.+||+|||++.......... ......++..|+|||.+
T Consensus        99 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (257)
T cd05115          99 ELMHQVSMGMKYLEGKNFVHRDLAA--------RNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECI  170 (257)
T ss_pred             HHHHHHHHHHHHHHhcCeeecccch--------heEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHH
Confidence            4567889999999999999999999        99999999999999999987654332211 11222234679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|++++ .|..||.+....+....+.....      .......++++.+++.+||..+|++||
T Consensus       171 ~~~~~~~~~Di~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~c~~~~~~~Rp  243 (257)
T cd05115         171 NFRKFSSRSDVWSYGITMWEAFS-YGQKPYKKMKGPEVMSFIEQGKR------LDCPAECPPEMYALMKDCWIYKWEDRP  243 (257)
T ss_pred             ccCCCCchhhHHHHHHHHHHHhc-CCCCCcCcCCHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            88888999999999999999985 36889988877666655543221      112245678999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.++.+.|+..
T Consensus       244 ~~~~i~~~l~~~  255 (257)
T cd05115         244 NFAKVEERMRTY  255 (257)
T ss_pred             CHHHHHHHHhhh
Confidence            999998888754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0663|consensus

Probab=99.96  E-value=1.5e-28  Score=178.63  Aligned_cols=161  Identities=22%  Similarity=0.274  Sum_probs=131.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      +..|++.|+.|+|.+.|+|||+|+        .|+|++..|.+||+|||+++...++.  ........|.+|.|||.+.+
T Consensus       182 L~~QlL~glk~lH~~wilHRDLK~--------SNLLm~~~G~lKiaDFGLAR~ygsp~--k~~T~lVVTLWYRaPELLLG  251 (419)
T KOG0663|consen  182 LMLQLLRGLKHLHDNWILHRDLKT--------SNLLLSHKGILKIADFGLAREYGSPL--KPYTPLVVTLWYRAPELLLG  251 (419)
T ss_pred             HHHHHHHHHHHHhhceeEecccch--------hheeeccCCcEEecccchhhhhcCCc--ccCcceEEEeeecCHHHhcC
Confidence            456889999999999999999999        99999999999999999999887653  23455667899999999997


Q ss_pred             CC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCC-------------------------
Q psy4332          89 RK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP-------------------------  142 (188)
Q Consensus        89 ~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  142 (188)
                      .. ++...|+||+||++.|++  .+.+-|.+....++..++......+.....+.                         
T Consensus       252 ~~tyst~iDMWSvGCI~aE~l--~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~  329 (419)
T KOG0663|consen  252 AKTYSTAVDMWSVGCIFAELL--TQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFG  329 (419)
T ss_pred             CcccCcchhhhhHHHHHHHHH--hcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhcc
Confidence            65 899999999999999999  66788888888888888876555443322110                         


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ....++.-.+++..++..||.+|.|++|.  |.||.+.-..
T Consensus       330 ~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p  370 (419)
T KOG0663|consen  330 ALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP  370 (419)
T ss_pred             ccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence            01134788999999999999999999998  8888875443

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.96  E-value=3.8e-28  Score=182.59  Aligned_cols=156  Identities=33%  Similarity=0.556  Sum_probs=121.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++|++|+|+||        +||+++.++.++|+|||++................++..|+|||.+.+
T Consensus       145 ~~~qi~~aL~~lH~~gi~H~dlkp--------~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (307)
T cd05098         145 CAYQVARGMEYLASKKCIHRDLAA--------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  216 (307)
T ss_pred             HHHHHHHHHHHHHHCCcccccccH--------HheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc
Confidence            467888999999999999999999        999999999999999999876543221111122233467999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++|++++ .|..||.+....+....+....     . .......+.++.+++.+||..+|++||++
T Consensus       217 ~~~~~~~DvwslG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~  289 (307)
T cd05098         217 RIYTHQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGH-----R-MDKPSNCTNELYMMMRDCWHAVPSQRPTF  289 (307)
T ss_pred             CCCCcHHHHHHHHHHHHHHHc-CCCCCCCcCCHHHHHHHHHcCC-----C-CCCCCcCCHHHHHHHHHHcccChhhCcCH
Confidence            888999999999999999995 2678888776655555443221     1 11123567899999999999999999999


Q ss_pred             HHHHHHHHhcc
Q psy4332         169 TEIHLFLQRKN  179 (188)
Q Consensus       169 ~el~~~l~~~~  179 (188)
                      .++...|+++-
T Consensus       290 ~evl~~l~~~~  300 (307)
T cd05098         290 KQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHHHHHH
Confidence            99988888763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.96  E-value=4.1e-28  Score=182.06  Aligned_cols=156  Identities=28%  Similarity=0.525  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+|+||        .||+++.++.++++|||++................++..|++||.+.
T Consensus       145 ~i~~~i~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  216 (302)
T cd05055         145 SFSYQVAKGMAFLASKNCIHRDLAA--------RNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF  216 (302)
T ss_pred             HHHHHHHHHHHHHHHCCeehhhhcc--------ceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhc
Confidence            3567899999999999999999999        99999999999999999987665433222223334567799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||.+....+.........    . ........+.++.+++.+||..+|++||+
T Consensus       217 ~~~~~~~~DiwslGvil~el~t-~g~~p~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  290 (302)
T cd05055         217 NCVYTFESDVWSYGILLWEIFS-LGSNPYPGMPVDSKFYKLIKEG----Y-RMAQPEHAPAEIYDIMKTCWDADPLKRPT  290 (302)
T ss_pred             cCCCCcHhHHHHHHHHHHHHHh-CCCCCcCCCCchHHHHHHHHcC----C-cCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            8888999999999999999995 2678888766444333332211    1 11112345789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +.++...|++
T Consensus       291 ~~ell~~l~~  300 (302)
T cd05055         291 FKQIVQLIGK  300 (302)
T ss_pred             HHHHHHHHHh
Confidence            9999988876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0610|consensus

Probab=99.96  E-value=7.3e-29  Score=184.41  Aligned_cols=157  Identities=24%  Similarity=0.331  Sum_probs=128.3

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCC---------------------
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS---------------------   65 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~---------------------   65 (188)
                      |..|.+++.||.|||-.|||+|||||        +|||+-++|++.|+||.++......                     
T Consensus       182 RFYaAEvl~ALEYLHmlGivYRDLKP--------ENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~  253 (459)
T KOG0610|consen  182 RFYAAEVLLALEYLHMLGIVYRDLKP--------ENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSR  253 (459)
T ss_pred             HHHHHHHHHHHHHHHhhceeeccCCc--------ceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccc
Confidence            44578899999999999999999999        9999999999999999886543110                     


Q ss_pred             -----------cccc----------------------ccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCC
Q psy4332          66 -----------DYYR----------------------VHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLAR  112 (188)
Q Consensus        66 -----------~~~~----------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~  112 (188)
                                 ...+                      ......||.-|+|||++.+..-...+|.|+||+++|||+  .|
T Consensus       254 ~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmL--yG  331 (459)
T KOG0610|consen  254 QPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEML--YG  331 (459)
T ss_pred             cccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHH--hC
Confidence                       0000                      012345788899999999999999999999999999999  78


Q ss_pred             CCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC----HHHH--HHHHHhc
Q psy4332         113 HRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS----FTEI--HLFLQRK  178 (188)
Q Consensus       113 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~el--~~~l~~~  178 (188)
                      ..||.+.+..+....++.....     .+..+..+.++++||+++|.+||++|..    +.||  |+||+.+
T Consensus       332 ~TPFKG~~~~~Tl~NIv~~~l~-----Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  332 TTPFKGSNNKETLRNIVGQPLK-----FPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             CCCcCCCCchhhHHHHhcCCCc-----CCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence            8999999988888888743221     2222366789999999999999999998    9999  8999866

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=7.8e-29  Score=190.00  Aligned_cols=160  Identities=18%  Similarity=0.168  Sum_probs=114.3

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++.......   ......++..|+|||.+
T Consensus       160 ~~i~~qi~~aL~~LH~~~ivHrDlkp--------~Nill~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~  228 (357)
T PHA03209        160 LIIEKQILEGLRYLHAQRIIHRDVKT--------ENIFINDVDQVCIGDLGAAQFPVVAP---AFLGLAGTVETNAPEVL  228 (357)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCCEEEecCccccccccCc---ccccccccccccCCeec
Confidence            34678899999999999999999999        99999999999999999986543221   22344578889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH--H-------HHHHhhcccC-CCCCc------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL--E-------VLENISHLHA-DDGEF------------------  138 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~--~-------~~~~~~~~~~-~~~~~------------------  138 (188)
                      .+..++.++||||+|+++|+++++ +..+|......  .       ....+..... .....                  
T Consensus       229 ~~~~~~~~~DiwSlGvvl~ell~~-~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (357)
T PHA03209        229 ARDKYNSKADIWSAGIVLFEMLAY-PSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASL  307 (357)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHc-CCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhccc
Confidence            888899999999999999999963 34444432111  0       0111110000 00000                  


Q ss_pred             --------ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         139 --------IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       139 --------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                              ........+.+..++|.+||..||++|||+.|+  |+||+++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        308 ERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             CCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence                    001112345677889999999999999999999  8898764

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=5e-28  Score=177.50  Aligned_cols=158  Identities=28%  Similarity=0.542  Sum_probs=124.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccc-cCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV-HDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.++.|+|.++++|+||||        +||+++.++.+||+|||+++.......... .....++..|++||.
T Consensus        98 ~~~~~qi~~~l~~lh~~~i~H~di~p--------~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  169 (257)
T cd05060          98 KELAHQVAMGMAYLESKHFVHRDLAA--------RNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPEC  169 (257)
T ss_pred             HHHHHHHHHHHHHHhhcCeeccCccc--------ceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHH
Confidence            34677899999999999999999999        999999999999999999876644332111 111223456999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++|+||||++++++++ .|..||......+....+.....      .......+..+.+++.+||..+|++|
T Consensus       170 ~~~~~~~~~~Di~slG~~l~~~~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~R  242 (257)
T cd05060         170 INYGKFSSKSDVWSYGVTLWEAFS-YGAKPYGEMKGAEVIAMLESGER------LPRPEECPQEIYSIMLSCWKYRPEDR  242 (257)
T ss_pred             hcCCCCCccchHHHHHHHHHHHHc-CCCCCcccCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHhcCChhhC
Confidence            988889999999999999999995 26789988776666555543211      11224467899999999999999999


Q ss_pred             CCHHHHHHHHHhcc
Q psy4332         166 PSFTEIHLFLQRKN  179 (188)
Q Consensus       166 ps~~el~~~l~~~~  179 (188)
                      |++.+++..|+++.
T Consensus       243 p~~~~l~~~l~~~~  256 (257)
T cd05060         243 PTFSELESTFRRDP  256 (257)
T ss_pred             cCHHHHHHHHHhcc
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=4.3e-28  Score=177.72  Aligned_cols=151  Identities=30%  Similarity=0.517  Sum_probs=120.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.+|++|||++.......     .....+..|+|||.+.
T Consensus       106 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~  172 (256)
T cd05082         106 KFSLDVCEAMEYLEANNFVHRDLAA--------RNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALR  172 (256)
T ss_pred             HHHHHHHHHHHHHHhCCEeccccch--------heEEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHc
Confidence            4567888999999999999999999        99999999999999999877543221     2223445799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .|..||......+....+.....      .......+..+.+++.+||..+|++||+
T Consensus       173 ~~~~~~~~Dv~slG~i~~~l~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rpt  245 (256)
T cd05082         173 EKKFSTKSDVWSFGILLWEIYS-FGRVPYPRIPLKDVVPRVEKGYK------MDAPDGCPPVVYDVMKQCWHLDAATRPS  245 (256)
T ss_pred             cCCCCchhhhHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            8888999999999999999996 26788887766665555432211      1122456789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++.+.|+++
T Consensus       246 ~~~l~~~l~~~  256 (256)
T cd05082         246 FLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHhcC
Confidence            99999988764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.96  E-value=4.7e-28  Score=177.10  Aligned_cols=154  Identities=30%  Similarity=0.528  Sum_probs=117.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+|+||        .||+++.++.+|++|||++.................+..|+|||.+.+
T Consensus        99 ~~~qi~~~L~~lH~~~i~H~dl~p--------~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  170 (252)
T cd05084          99 MVENAAAGMEYLESKHCIHRDLAA--------RNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY  170 (252)
T ss_pred             HHHHHHHHHHHHHhCCccccccch--------heEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC
Confidence            456788999999999999999999        999999999999999999875432211111112223456999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++|++++ .+..||...........+....     . .......+..+.+++.+||..+|++||++
T Consensus       171 ~~~~~~~Dv~slG~il~e~~~-~~~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~  243 (252)
T cd05084         171 GRYSSESDVWSFGILLWEAFS-LGAVPYANLSNQQTREAIEQGV-----R-LPCPELCPDAVYRLMERCWEYDPGQRPSF  243 (252)
T ss_pred             CCCChHHHHHHHHHHHHHHHh-CCCCCccccCHHHHHHHHHcCC-----C-CCCcccCCHHHHHHHHHHcCCChhhCcCH
Confidence            888999999999999999995 2678887776555444443211     1 11123457899999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      .++.+.|++
T Consensus       244 ~~~~~~l~~  252 (252)
T cd05084         244 STVHQELQS  252 (252)
T ss_pred             HHHHHHHhC
Confidence            999888763

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.95  E-value=5.5e-28  Score=178.22  Aligned_cols=155  Identities=39%  Similarity=0.686  Sum_probs=121.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-----eEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-----EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      .++.+++.++.|+|+++++|+|+||        +||+++.++     .++++|||++................++..|++
T Consensus       110 ~~~~~l~~~l~~lH~~~i~H~dl~p--------~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  181 (269)
T cd05044         110 DICLDVAKGCVYLEQMHFIHRDLAA--------RNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMA  181 (269)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCh--------heEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccC
Confidence            4667889999999999999999999        999999877     899999999876643322222233345678999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||.+.+..++.++||||||+++|+++| .|..||......+....+...     .. .......+.++.+++.+||..+|
T Consensus       182 PE~~~~~~~~~~~Dv~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~li~~~l~~~p  254 (269)
T cd05044         182 PESLLDGKFTTQSDVWSFGVLMWEILT-LGQQPYPALNNQEVLQHVTAG-----GR-LQKPENCPDKIYQLMTNCWAQDP  254 (269)
T ss_pred             HHHHccCCcccchhHHHHHHHHHHHHH-cCCCCCcccCHHHHHHHHhcC-----Cc-cCCcccchHHHHHHHHHHcCCCc
Confidence            999988889999999999999999995 267888877665555444321     11 11224567899999999999999


Q ss_pred             CCCCCHHHHHHHHHh
Q psy4332         163 TERPSFTEIHLFLQR  177 (188)
Q Consensus       163 ~~Rps~~el~~~l~~  177 (188)
                      .+||++.++...|++
T Consensus       255 ~~Rp~~~~i~~~l~~  269 (269)
T cd05044         255 SERPTFDRIQEILQN  269 (269)
T ss_pred             ccCCCHHHHHHHHhC
Confidence            999999999888763

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.95  E-value=5.8e-28  Score=178.29  Aligned_cols=158  Identities=28%  Similarity=0.514  Sum_probs=116.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|+++++|+|+||        .||+++.++.++|+|||++................++..|++||++.
T Consensus       103 ~~~~~i~~al~~lH~~~i~H~dikp--------~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         103 RMACEIAAGVTHMHKHNFLHSDLAL--------RNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCcc--------ceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcc
Confidence            4567889999999999999999999        99999999999999999875432221111223445677899999874


Q ss_pred             c-------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          88 L-------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        88 ~-------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .       ..++.++||||||+++|++++ .+..||......+....+.......... ......+++.+.+++..|| .
T Consensus       175 ~~~~~~~~~~~~~~~DiwslG~~l~el~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~c~-~  251 (268)
T cd05086         175 EFHGGLITAEQTKPSNVWALGVTLWELFE-NAAQPYSHLSDREVLNHVIKDQQVKLFK-PQLELPYSERWYEVLQFCW-L  251 (268)
T ss_pred             cccCccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHhhcccccCC-CccCCCCcHHHHHHHHHHh-h
Confidence            2       235678999999999999996 3567888777666665544321111111 1112346788999999999 6


Q ss_pred             CCCCCCCHHHHHHHHH
Q psy4332         161 SPTERPSFTEIHLFLQ  176 (188)
Q Consensus       161 dp~~Rps~~el~~~l~  176 (188)
                      +|++||+++++++.|.
T Consensus       252 ~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         252 SPEKRATAEEVHRLLT  267 (268)
T ss_pred             CcccCCCHHHHHHHhc
Confidence            7999999999988774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.95  E-value=3.4e-28  Score=188.65  Aligned_cols=157  Identities=29%  Similarity=0.497  Sum_probs=121.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+||||        .||+++.++.+||+|||+++...............++..|+|||.+.
T Consensus       241 ~~~~qi~~aL~~LH~~~ivH~dikp--------~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  312 (400)
T cd05105         241 SFTYQVARGMEFLASKNCVHRDLAA--------RNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF  312 (400)
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCh--------HhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc
Confidence            3667899999999999999999999        99999999999999999987654332222223344567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHH-HHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV-LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..++.++||||||+++|++++ .|..||........ ...+...     .. .......+.++.+++.+||..||++||
T Consensus       313 ~~~~~~~~DiwSlGvil~ellt-~g~~P~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~l~~li~~cl~~dP~~RP  385 (400)
T cd05105         313 DNLYTTLSDVWSYGILLWEIFS-LGGTPYPGMIVDSTFYNKIKSG-----YR-MAKPDHATQEVYDIMVKCWNSEPEKRP  385 (400)
T ss_pred             CCCCCchhhHHHHHHHHHHHHH-CCCCCCcccchhHHHHHHHhcC-----CC-CCCCccCCHHHHHHHHHHCccCHhHCc
Confidence            8888999999999999999986 35678876543322 2222211     11 112245678999999999999999999


Q ss_pred             CHHHHHHHHHhcc
Q psy4332         167 SFTEIHLFLQRKN  179 (188)
Q Consensus       167 s~~el~~~l~~~~  179 (188)
                      ++.++.+.|+++-
T Consensus       386 t~~~l~~~l~~l~  398 (400)
T cd05105         386 SFLHLSDIVESLL  398 (400)
T ss_pred             CHHHHHHHHHHHc
Confidence            9999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.95  E-value=1.4e-28  Score=182.48  Aligned_cols=156  Identities=14%  Similarity=0.222  Sum_probs=117.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        .||+++.++.++|+|||++.......   ......++..|+|||.+.
T Consensus        99 ~~~~qi~~al~~lH~~~ivH~dikp--------~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  167 (277)
T cd05607          99 HYSAQITCGILHLHSMDIVYRDMKP--------ENVLLDDQGNCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILK  167 (277)
T ss_pred             HHHHHHHHHHHHHHHCCEEEccCCh--------HhEEEcCCCCEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHc
Confidence            3567899999999999999999999        99999999999999999987654332   122345778899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++  .|..||.+.........+.....  ..........++.++.+++.+||+.||++||+
T Consensus       168 ~~~~~~~~DvwslGv~l~el~--~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~  243 (277)
T cd05607         168 EEPYSYPVDWFAMGCSIYEMV--AGRTPFKDHKEKVAKEELKRRTL--EDEVKFEHQNFTEESKDICRLFLAKKPEDRLG  243 (277)
T ss_pred             cCCCCCchhHHHHHHHHHHHH--hCCCCCCCCcchhhHHHHHHHhh--ccccccccccCCHHHHHHHHHHhccCHhhCCC
Confidence            888999999999999999999  56788876532211111111100  11111122356889999999999999999999


Q ss_pred             HHH----H--HHHHHhc
Q psy4332         168 FTE----I--HLFLQRK  178 (188)
Q Consensus       168 ~~e----l--~~~l~~~  178 (188)
                      +.|    +  |+|++.+
T Consensus       244 ~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         244 SREKNDDPRKHEFFKTI  260 (277)
T ss_pred             CccchhhhhcChhhcCC
Confidence            944    4  7888765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0983|consensus

Probab=99.95  E-value=3.6e-28  Score=172.81  Aligned_cols=143  Identities=26%  Similarity=0.477  Sum_probs=113.6

Q ss_pred             chhhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc--
Q psy4332          12 NLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL--   88 (188)
Q Consensus        12 ~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--   88 (188)
                      .++.||.||. ++||+|||+||        .|||++..|.+|+||||.+..+.++   ..++...|.+.||+||-+.-  
T Consensus       199 a~v~AL~YLKeKH~viHRDvKP--------SNILlDe~GniKlCDFGIsGrlvdS---kAhtrsAGC~~YMaPERidp~~  267 (391)
T KOG0983|consen  199 AIVKALYYLKEKHGVIHRDVKP--------SNILLDERGNIKLCDFGISGRLVDS---KAHTRSAGCAAYMAPERIDPPD  267 (391)
T ss_pred             HHHHHHHHHHHhcceeecccCc--------cceEEccCCCEEeecccccceeecc---cccccccCCccccCccccCCCC
Confidence            4557888886 78999999999        9999999999999999998877554   24455667788999999852  


Q ss_pred             -CCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          89 -RKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        89 -~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                       .++.-.+||||||+.++|+.  +|..||.+- .+.+...++.+.   ++ ........++.++++|+..||.+|+.+||
T Consensus       268 ~~kYDiRaDVWSlGITlveLa--Tg~yPy~~c~tdFe~ltkvln~---eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP  341 (391)
T KOG0983|consen  268 KPKYDIRADVWSLGITLVELA--TGQYPYKGCKTDFEVLTKVLNE---EP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRP  341 (391)
T ss_pred             CCccchhhhhhhhccchhhhh--cccCCCCCCCccHHHHHHHHhc---CC-CCCCcccCcCHHHHHHHHHHhhcCcccCc
Confidence             35677899999999999999  567899874 345666666542   11 11222234899999999999999999999


Q ss_pred             CHHHH
Q psy4332         167 SFTEI  171 (188)
Q Consensus       167 s~~el  171 (188)
                      ...++
T Consensus       342 ~Y~~L  346 (391)
T KOG0983|consen  342 KYNKL  346 (391)
T ss_pred             chHHH
Confidence            99987

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.95  E-value=5.4e-28  Score=178.64  Aligned_cols=156  Identities=30%  Similarity=0.631  Sum_probs=123.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.+|++|||++................+++.|++||.+.
T Consensus       117 ~~~~~i~~~l~~lH~~~i~H~dikp--------~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05074         117 RFMIDIASGMEYLSSKNFIHRDLAA--------RNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLA  188 (273)
T ss_pred             HHHHHHHHHHHHHHhCCEeecccch--------hhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHh
Confidence            4567888999999999999999999        99999999999999999987664433222223334556799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .+..||.+....+....+.....      .......+..+.+++.+||..+|++||+
T Consensus       189 ~~~~~~~sDi~slG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rps  261 (273)
T cd05074         189 DNVYTTHSDVWAFGVTMWEIMT-RGQTPYAGVENSEIYNYLIKGNR------LKQPPDCLEDVYELMCQCWSPEPKCRPS  261 (273)
T ss_pred             cCccchhhhhHHHHHHHHHHhh-CCCCCCCCCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            8888999999999999999995 36788888776655554443211      1112346679999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       262 ~~~~~~~l~~~  272 (273)
T cd05074         262 FQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHhh
Confidence            99999988875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.95  E-value=5.8e-28  Score=177.96  Aligned_cols=156  Identities=29%  Similarity=0.546  Sum_probs=122.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+|+||        .||+++.++.++++|||++................++..|++||.+.
T Consensus       110 ~~~~~l~~~l~~Lh~~~i~H~di~p--------~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~  181 (266)
T cd05033         110 GMLRGIASGMKYLSEMNYVHRDLAA--------RNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIA  181 (266)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCc--------ceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhc
Confidence            3467888999999999999999999        99999999999999999988764221111112233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|++++++++ .|..||......+....+.....      .......+..+.+++.+||+.+|++||+
T Consensus       182 ~~~~~~~~Dv~slG~~l~~l~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rp~  254 (266)
T cd05033         182 YRKFTSASDVWSFGIVMWEVMS-YGERPYWDMSNQDVIKAVEDGYR------LPPPMDCPSALYQLMLDCWQKDRNERPT  254 (266)
T ss_pred             cCCCccccchHHHHHHHHHHHc-cCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            8889999999999999999985 36789987776666555543211      1112356789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      ++++...|+++
T Consensus       255 ~~ei~~~l~~~  265 (266)
T cd05033         255 FSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHHHhh
Confidence            99999888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=4.2e-28  Score=178.70  Aligned_cols=155  Identities=20%  Similarity=0.316  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++|++|+|+||        +||+++.++.++++|||++........  ......++..|+|||.+.
T Consensus       110 ~~~~~i~~~l~~LH~~~i~H~dl~~--------~nil~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~  179 (267)
T cd08228         110 KYFVQLCSAVEHMHSRRVMHRDIKP--------ANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             HHHHHHHHHHHHHhhCCeeCCCCCH--------HHEEEcCCCCEEECccccceeccchhH--HHhcCCCCccccChhhhc
Confidence            4567889999999999999999999        999999999999999998776543221  122345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..++.++|+||+|+++++++  +|..||....  .......+...     .....+....+.++.+++.+||..+|++|
T Consensus       180 ~~~~~~~~Di~slG~~l~el~--~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~R  252 (267)
T cd08228         180 ENGYNFKSDIWSLGCLLYEMA--ALQSPFYGDKMNLFSLCQKIEQC-----DYPPLPTEHYSEKLRELVSMCIYPDPDQR  252 (267)
T ss_pred             cCCCCchhhHHHHHHHHHHHh--cCCCCCccccccHHHHHHHHhcC-----CCCCCChhhcCHHHHHHHHHHCCCCcccC
Confidence            888899999999999999999  4567776543  22333333211     11122233467889999999999999999


Q ss_pred             CCHHHHHHHHHhcc
Q psy4332         166 PSFTEIHLFLQRKN  179 (188)
Q Consensus       166 ps~~el~~~l~~~~  179 (188)
                      |+++++++.+++++
T Consensus       253 p~~~~vl~~~~~~~  266 (267)
T cd08228         253 PDIGYVHQIAKQMH  266 (267)
T ss_pred             cCHHHHHHHHHHhc
Confidence            99999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.8e-28  Score=192.67  Aligned_cols=162  Identities=20%  Similarity=0.205  Sum_probs=114.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++||+|+||||        .||+++.++.+||+|||+++...............||..|++||++
T Consensus       263 ~~i~~qi~~aL~yLH~~gIvHrDLKP--------~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~  334 (461)
T PHA03211        263 TAVARQLLSAIDYIHGEGIIHRDIKT--------ENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL  334 (461)
T ss_pred             HHHHHHHHHHHHHHHHCCEEECcCCH--------HHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHH
Confidence            35678899999999999999999999        9999999999999999998765432222222345688999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-------CCHHHHHHHhhcccCCCCCcc--------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEG-------LTDLEVLENISHLHADDGEFI--------------------  139 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~-------~~~~~~~~~~~~~~~~~~~~~--------------------  139 (188)
                      .+..++.++|||||||++||++++. ...|..       .....+...+...........                    
T Consensus       335 ~~~~~~~~sDvwSlGviL~El~~g~-~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  413 (461)
T PHA03211        335 AGDPYTPSVDIWSAGLVIFEAAVHT-ASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRR  413 (461)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHcC-CCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccC
Confidence            9888999999999999999998532 222221       111222222211110000000                    


Q ss_pred             -------cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHh
Q psy4332         140 -------YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       140 -------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~  177 (188)
                             .......+.++.+|+.+||..||++|||+.|+  |+||+.
T Consensus       414 ~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        414 PAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             CccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                   00011335578999999999999999999999  677753

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.95  E-value=6.7e-28  Score=177.08  Aligned_cols=155  Identities=32%  Similarity=0.548  Sum_probs=122.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++........ .......++..|+|||.+
T Consensus       105 ~~~~~~l~~al~~lH~~~i~H~di~p--------~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~  175 (260)
T cd05070         105 VDMAAQVAAGMAYIERMNYIHRDLRS--------ANILVGDGLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAA  175 (260)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCcc--------ceEEEeCCceEEeCCceeeeeccCccc-ccccCCCCCccccChHHH
Confidence            34567889999999999999999999        999999999999999999876543221 111222345679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+...+.++|+||||++++++++ .|..||.+....+....+....     . .......+..+.+++.+||..+|++||
T Consensus       176 ~~~~~~~~~Di~slG~~l~~l~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp  248 (260)
T cd05070         176 LYGRFTIKSDVWSFGILLTELVT-KGRVPYPGMNNREVLEQVERGY-----R-MPCPQDCPISLHELMLQCWKKDPEERP  248 (260)
T ss_pred             hcCCCcchhhhHHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCC-----C-CCCCCcCCHHHHHHHHHHcccCcccCc
Confidence            88888999999999999999996 3678998877666665554221     1 111234577899999999999999999


Q ss_pred             CHHHHHHHHHh
Q psy4332         167 SFTEIHLFLQR  177 (188)
Q Consensus       167 s~~el~~~l~~  177 (188)
                      |+.++.++|++
T Consensus       249 t~~~l~~~l~~  259 (260)
T cd05070         249 TFEYLQSFLED  259 (260)
T ss_pred             CHHHHHHHHhc
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.95  E-value=2.1e-29  Score=190.85  Aligned_cols=151  Identities=19%  Similarity=0.242  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.++.|+|+ +||+|+||||        +||+++.++.+||+|||++........  ......+++.|+|||++
T Consensus        99 ~~~~qi~~aL~~lH~~~~ivHrDikp--------~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~  168 (325)
T cd05594          99 FYGAEIVSALDYLHSEKNVVYRDLKL--------ENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVL  168 (325)
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCCC--------CeEEECCCCCEEEecCCCCeecCCCCc--ccccccCCcccCCHHHH
Confidence            356789999999997 8999999999        999999999999999999765432211  12234588899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++|+++  +|..||.+.........+.....       ......+.++.+++.+||+.||++|+
T Consensus       169 ~~~~~~~~~DiwslG~il~el~--tG~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         169 EDNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHEKLFELILMEEI-------RFPRTLSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             ccCCCCCccccccccceeeeec--cCCCCCCCCCHHHHHHHHhcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHhC
Confidence            8888999999999999999999  67889988776665555432211       11234678999999999999999997


Q ss_pred             -----CHHHH--HHHHHh
Q psy4332         167 -----SFTEI--HLFLQR  177 (188)
Q Consensus       167 -----s~~el--~~~l~~  177 (188)
                           ++.++  |+||+.
T Consensus       240 ~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         240 GGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence                 89998  666664

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0595|consensus

Probab=99.95  E-value=1.5e-28  Score=182.50  Aligned_cols=150  Identities=25%  Similarity=0.399  Sum_probs=121.4

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCc------ceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK------FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      ..||+.|+.+||+++|+||||||        +|||++..      -.+||+|||+++......   .....+|++-||||
T Consensus       115 m~QLA~alq~L~~~~IiHRDLKP--------QNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAP  183 (429)
T KOG0595|consen  115 MQQLASALQFLHENNIIHRDLKP--------QNILLSTTARNDTSPVLKIADFGFARFLQPGS---MAETLCGSPLYMAP  183 (429)
T ss_pred             HHHHHHHHHHHHHCCeeeccCCc--------ceEEeccCCCCCCCceEEecccchhhhCCchh---HHHHhhCCccccCH
Confidence            46899999999999999999999        99999865      468999999999887543   55678899999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |++....|+.|+|+||+|+++|+++  .|..||......++...+....    ..........+....+++...+..++.
T Consensus       184 EV~~~~~YdAKADLWSiG~Ilyq~l--~g~~Pf~a~t~~eL~~~~~k~~----~~~~~~~~~~s~~~~~Ll~~ll~~~~~  257 (429)
T KOG0595|consen  184 EVIMSQQYDAKADLWSIGTILYQCL--TGKPPFDAETPKELLLYIKKGN----EIVPVLPAELSNPLRELLISLLQRNPK  257 (429)
T ss_pred             HHHHhccccchhhHHHHHHHHHHHH--hCCCCccccCHHHHHHHHhccc----cccCchhhhccCchhhhhhHHHhcCcc
Confidence            9999999999999999999999999  6789999999888887654322    111222233455667888888888888


Q ss_pred             CCCCHHHH--HHHHH
Q psy4332         164 ERPSFTEI--HLFLQ  176 (188)
Q Consensus       164 ~Rps~~el--~~~l~  176 (188)
                      .|.++.+-  ++++.
T Consensus       258 ~~~~~~~~~~~~~l~  272 (429)
T KOG0595|consen  258 DRISFEDFFDHPFLA  272 (429)
T ss_pred             ccCchHHhhhhhhcc
Confidence            88887765  55554

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.95  E-value=2.7e-29  Score=190.57  Aligned_cols=155  Identities=20%  Similarity=0.347  Sum_probs=121.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh-
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   87 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... ......+++.|+|||.+. 
T Consensus       107 ~~~qi~~aL~~lH~~~i~H~Dlkp--------~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         107 YLAELVLAIHSVHQMGYVHRDIKP--------ENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             HHHHHHHHHHHHHHCCeEcccCch--------HheEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhcc
Confidence            456889999999999999999999        9999999999999999998766433221 222345788999999986 


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                           ...++.++||||+|+++|+++  .|..||.+.........+....   ...........+.++.+++.+|+. +|
T Consensus       178 ~~~~~~~~~~~~~DiwslG~il~el~--~g~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~li~~ll~-~p  251 (330)
T cd05601         178 MNGDGKGTYGVECDWWSLGVIAYEMI--YGRSPFHEGTSAKTYNNIMNFQ---RFLKFPEDPKVSSDFLDLIQSLLC-GQ  251 (330)
T ss_pred             ccccccCCCCCcceeecccceeeeec--cCCCCCCCCCHHHHHHHHHcCC---CccCCCCCCCCCHHHHHHHHHHcc-Ch
Confidence                 345678999999999999999  6788998877666666554331   111122234568899999999997 99


Q ss_pred             CCCCCHHHH--HHHHHhc
Q psy4332         163 TERPSFTEI--HLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~  178 (188)
                      ++||+++++  |+||+.+
T Consensus       252 ~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         252 KERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             hhCCCHHHHhCCCCcCCC
Confidence            999999999  7888754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.95  E-value=1.8e-28  Score=188.33  Aligned_cols=158  Identities=20%  Similarity=0.256  Sum_probs=119.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-------------------
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-------------------   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------   68 (188)
                      ..+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++........                   
T Consensus       105 ~~~~qi~~aL~~lH~~givHrDlKp--------~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (363)
T cd05628         105 FYIAETVLAIDSIHQLGFIHRDIKP--------DNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM  176 (363)
T ss_pred             HHHHHHHHHHHHHHhCCeEecCCCH--------HHeEECCCCCEEEeeccCccccccccccccccccccccccccccccc
Confidence            3567888999999999999999999        9999999999999999998754321100                   


Q ss_pred             --------------cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC
Q psy4332          69 --------------RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD  134 (188)
Q Consensus        69 --------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~  134 (188)
                                    .......||+.|+|||.+.+..++.++||||+||++|+|+  .|..||.+....+....+..+...
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell--~G~~Pf~~~~~~~~~~~i~~~~~~  254 (363)
T cd05628         177 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML--IGYPPFCSETPQETYKKVMNWKET  254 (363)
T ss_pred             ccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCcCc
Confidence                          0012346889999999999888999999999999999999  578999988877777766543211


Q ss_pred             CCCcccCCCCCChHHHHHHHHHHhcc--CCCCCCCHHHH--HHHHHhc
Q psy4332         135 DGEFIYLPTPQTTKDILDLMNECWKR--SPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~--dp~~Rps~~el--~~~l~~~  178 (188)
                         ....+....++++.+++.+++..  ++..||+++|+  |+||+.+
T Consensus       255 ---~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         255 ---LIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             ---ccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence               11112234678899999986642  23356899999  7787654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0596|consensus

Probab=99.95  E-value=1.3e-28  Score=188.92  Aligned_cols=156  Identities=26%  Similarity=0.421  Sum_probs=119.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..-.+|+.++.+.|.+||||.||||        .|+|+-. |.+||+|||.+..+.............||++||+||.+.
T Consensus       464 ~ywkqML~aV~~IH~~gIVHSDLKP--------ANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~  534 (677)
T KOG0596|consen  464 FYWKQMLLAVKTIHQHGIVHSDLKP--------ANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALT  534 (677)
T ss_pred             HHHHHHHHHHHHHHHhceeecCCCc--------ccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHh
Confidence            3446789999999999999999999        9988754 589999999999988776666778889999999999986


Q ss_pred             cC-----------CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          88 LR-----------KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        88 ~~-----------~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      ..           ++++++||||+||++|+|.  +|..||.....  .+.++.... .++.....+.-....++.+++..
T Consensus       535 ~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv--YgktPf~~~~n--~~aKl~aI~-~P~~~Iefp~~~~~~~li~~mK~  609 (677)
T KOG0596|consen  535 DMSSSRENGKSKIKISRKSDVWSLGCILYQMV--YGKTPFGQIIN--QIAKLHAIT-DPNHEIEFPDIPENDELIDVMKC  609 (677)
T ss_pred             hccccccCCCcceeecCccchhhhhhHHHHHH--hcCCchHHHHH--HHHHHHhhc-CCCccccccCCCCchHHHHHHHH
Confidence            21           2678999999999999999  78899987642  222222211 12222222222223349999999


Q ss_pred             HhccCCCCCCCHHHH--HHHHHh
Q psy4332         157 CWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       157 cl~~dp~~Rps~~el--~~~l~~  177 (188)
                      ||..||++||++.++  |+|++-
T Consensus       610 CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  610 CLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHhcCcccCCCcHHHhcCccccc
Confidence            999999999999999  667764

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=7.2e-28  Score=177.73  Aligned_cols=158  Identities=29%  Similarity=0.553  Sum_probs=116.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|+|++||+|+|+||        .||+++.++.+||+|||++................++..|+|||++.
T Consensus       104 ~~~~qi~~~l~~lH~~~ivH~dlkp--------~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05042         104 RMACEVASGLLWLHQADFIHSDLAL--------RNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVE  175 (269)
T ss_pred             HHHHHHHHHHHHHHhcCEecccccH--------hheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHh
Confidence            4567889999999999999999999        99999999999999999976543322222223344566799999975


Q ss_pred             c-------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          88 L-------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        88 ~-------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .       ...+.++||||+|+++|+++++ +..||......+.......... ............+..+.+++..|| .
T Consensus       176 ~~~~~~~~~~~~~~~DiwslG~~l~el~~~-~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~  252 (269)
T cd05042         176 IRGQDLLPKDQTKKSNIWSLGVTMWELFTA-ADQPYPDLSDEQVLKQVVREQD-IKLPKPQLDLKYSDRWYEVMQFCW-L  252 (269)
T ss_pred             hccccccccccchhhHHHHHHHHHHHHHhC-CCCCCCcCCHHHHHHHHhhccC-ccCCCCcccccCCHHHHHHHHHHh-c
Confidence            3       3467799999999999999963 6788887766555444432211 111111122456788899999999 5


Q ss_pred             CCCCCCCHHHHHHHHH
Q psy4332         161 SPTERPSFTEIHLFLQ  176 (188)
Q Consensus       161 dp~~Rps~~el~~~l~  176 (188)
                      ||++||++++|.+.|+
T Consensus       253 dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         253 DPETRPTAEEVHELLT  268 (269)
T ss_pred             CcccccCHHHHHHHhc
Confidence            9999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.95  E-value=7.1e-28  Score=183.14  Aligned_cols=156  Identities=33%  Similarity=0.566  Sum_probs=122.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||+++...............++..|++||.+.+
T Consensus       139 ~~~qi~~al~~LH~~givH~dlkp--------~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (334)
T cd05100         139 CAYQVARGMEYLASQKCIHRDLAA--------RNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD  210 (334)
T ss_pred             HHHHHHHHHHHHHHCCeecccccc--------ceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc
Confidence            456899999999999999999999        999999999999999999876543322222222334467999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|++++ .+..||.+....+....+.....      .......+.++.+++.+||..+|++||++
T Consensus       211 ~~~~~~~Di~slG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rps~  283 (334)
T cd05100         211 RVYTHQSDVWSFGVLLWEIFT-LGGSPYPGIPVEELFKLLKEGHR------MDKPANCTHELYMIMRECWHAVPSQRPTF  283 (334)
T ss_pred             CCcCchhhhHHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcccChhhCcCH
Confidence            888999999999999999995 26788988876666655543211      11123457789999999999999999999


Q ss_pred             HHHHHHHHhcc
Q psy4332         169 TEIHLFLQRKN  179 (188)
Q Consensus       169 ~el~~~l~~~~  179 (188)
                      .++...|+++.
T Consensus       284 ~ell~~l~~~~  294 (334)
T cd05100         284 KQLVEDLDRVL  294 (334)
T ss_pred             HHHHHHHHHHh
Confidence            99988888764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.95  E-value=2e-28  Score=185.44  Aligned_cols=152  Identities=21%  Similarity=0.374  Sum_probs=120.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ......|+..|+|||++.
T Consensus       105 ~i~~qi~~al~~lH~~~ivHrDikp--------~Nill~~~~~ikL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~  174 (323)
T cd05615         105 FYAAEISVGLFFLHRRGIIYRDLKL--------DNVMLDSEGHIKIADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIA  174 (323)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCH--------HHeEECCCCCEEEeccccccccCCCCc--cccCccCCccccCHHHHc
Confidence            4567899999999999999999999        999999999999999999875432221  123345788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||.+.........+.....       ......+.++.+++.+||..+|++|++
T Consensus       175 ~~~~~~~~DiwslGvil~ell--tG~~pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~l~~~p~~R~~  245 (323)
T cd05615         175 YQPYGKSVDWWAYGVLLYEML--AGQPPFDGEDEDELFQSIMEHNV-------SYPKSLSKEAVSICKGLMTKHPSKRLG  245 (323)
T ss_pred             CCCCCCccchhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCC-------CCCccCCHHHHHHHHHHcccCHhhCCC
Confidence            888899999999999999999  56789998877666666553221       112345778999999999999999997


Q ss_pred             H-----HHH--HHHHHhc
Q psy4332         168 F-----TEI--HLFLQRK  178 (188)
Q Consensus       168 ~-----~el--~~~l~~~  178 (188)
                      +     +++  |+||+.+
T Consensus       246 ~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         246 CGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCCCCHHHHhcCcccCCC
Confidence            4     455  6666644

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=6.2e-28  Score=177.36  Aligned_cols=154  Identities=31%  Similarity=0.566  Sum_probs=121.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++||+|+|+||        .||+++.++.++|+|||++........ ........+..|++||.+.
T Consensus       107 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05068         107 DMAAQVASGMAYLEAQNYIHRDLAA--------RNVLVGENNICKVADFGLARVIKEDIY-EAREGAKFPIKWTAPEAAL  177 (261)
T ss_pred             HHHHHHHHHHHHHHhCCeeeccCCc--------ceEEEcCCCCEEECCcceEEEccCCcc-cccCCCcCceeccCccccc
Confidence            4567888999999999999999999        999999999999999999876653221 1112222345799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++| .|..||.+.........+.....      .......+..+.+++.+||..+|++||+
T Consensus       178 ~~~~~~~~Di~slG~~l~el~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~Rp~  250 (261)
T cd05068         178 YNRFSIKSDVWSFGILLTEIVT-YGRMPYPGMTNAEVLQQVDQGYR------MPCPPGCPKELYDIMLDCWKEDPDDRPT  250 (261)
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCCC------CCCCCcCCHHHHHHHHHHhhcCcccCCC
Confidence            8888999999999999999996 26789988776666655543211      1122346789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      ++++...|++
T Consensus       251 ~~~l~~~l~~  260 (261)
T cd05068         251 FETLQWKLED  260 (261)
T ss_pred             HHHHHHHHhc
Confidence            9999988875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.95  E-value=1e-27  Score=176.41  Aligned_cols=154  Identities=31%  Similarity=0.582  Sum_probs=122.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|+++++|+|+||        .||+++.++.++|+|||.+........ .......++..|++||...
T Consensus       106 ~~~~~l~~aL~~lH~~~i~H~dl~p--------~Nill~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~  176 (262)
T cd05071         106 DMAAQIASGMAYVERMNYVHRDLRA--------ANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAAL  176 (262)
T ss_pred             HHHHHHHHHHHHHHHCCccccccCc--------ccEEEcCCCcEEeccCCceeecccccc-ccccCCcccceecCHhHhc
Confidence            3567888999999999999999999        999999999999999999876543321 1122334566799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++|+ +..||.+....+....+....      ........+..+.+++.+|++.+|++||+
T Consensus       177 ~~~~~~~~DvwslG~~l~ellt~-g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~  249 (262)
T cd05071         177 YGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVERGY------RMPCPPECPESLHDLMCQCWRKEPEERPT  249 (262)
T ss_pred             cCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCChHHHHHHHhcCC------CCCCccccCHHHHHHHHHHccCCcccCCC
Confidence            88899999999999999999962 678998877666655543211      01112456788999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +++++.+|++
T Consensus       250 ~~~~~~~l~~  259 (262)
T cd05071         250 FEYLQAFLED  259 (262)
T ss_pred             HHHHHHHHHH
Confidence            9999998875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.95  E-value=9.3e-28  Score=176.31  Aligned_cols=154  Identities=29%  Similarity=0.521  Sum_probs=123.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.+||+|||++........  ......++..|++||.+.
T Consensus       108 ~~~~~i~~al~~lH~~~i~h~dl~~--------~nilv~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~PE~~~  177 (261)
T cd05148         108 DMACQVAEGMAYLEEQNSIHRDLAA--------RNILVGEDLVCKVADFGLARLIKEDVY--LSSDKKIPYKWTAPEAAS  177 (261)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccCc--------ceEEEcCCceEEEccccchhhcCCccc--cccCCCCceEecCHHHHc
Confidence            3567888999999999999999999        999999999999999999876643221  112334566799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|++++++++ .|..||.+....+....+....     . .......++.+.+++.+||..||.+||+
T Consensus       178 ~~~~~~~~DiwslG~~l~~l~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt  250 (261)
T cd05148         178 HGTFSTKSDVWSFGILLYEMFT-YGQVPYPGMNNHEVYDQITAGY-----R-MPCPAKCPQEIYKIMLECWAAEPEDRPS  250 (261)
T ss_pred             cCCCCchhhHHHHHHHHHHHHc-CCCCCCCcCCHHHHHHHHHhCC-----c-CCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            8888999999999999999995 3688998877666655554211     1 1112456789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++.+.|+.+
T Consensus       251 ~~~l~~~L~~~  261 (261)
T cd05148         251 FKALREELDNI  261 (261)
T ss_pred             HHHHHHHHhcC
Confidence            99999988753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.95  E-value=3.9e-29  Score=189.87  Aligned_cols=152  Identities=20%  Similarity=0.291  Sum_probs=115.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.++.|+|++||+||||||        +||+++.++.+||+|||++........ .......|++.|+|||.+.+
T Consensus       110 ~~~qi~~~l~~lH~~~ivHrDlkp--------~Nili~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~  180 (332)
T cd05614         110 YSGEIILALEHLHKLGIVYRDIKL--------ENILLDSEGHVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRG  180 (332)
T ss_pred             HHHHHHHHHHHHHHCCcEecCCCH--------HHeEECCCCCEEEeeCcCCccccccCC-CccccccCCccccCHHHhcC
Confidence            456889999999999999999999        999999999999999999876543221 12234568889999999976


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCC----HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLT----DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      . ..+.++||||+|+++|+++  +|..||....    .......+....       .......+..+.+++.+||..||+
T Consensus       181 ~~~~~~~~DiwslG~il~ell--tg~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~  251 (332)
T cd05614         181 KGGHGKAVDWWSLGILIFELL--TGASPFTLEGERNTQSEVSRRILKCD-------PPFPSFIGPEAQDLLHKLLRKDPK  251 (332)
T ss_pred             CCCCCCccccccchhhhhhhh--cCCCCCCCCCCCCCHHHHHHHHhcCC-------CCCCCCCCHHHHHHHHHHcCCCHH
Confidence            4 3688999999999999999  5678886432    222233232211       111245678999999999999999


Q ss_pred             CCC-----CHHHH--HHHHHhc
Q psy4332         164 ERP-----SFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rp-----s~~el--~~~l~~~  178 (188)
                      +||     +++++  |+||+..
T Consensus       252 ~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         252 KRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HcCCCCCCCHHHHHcCCCcCCC
Confidence            999     77788  6777643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.95  E-value=1e-27  Score=175.68  Aligned_cols=155  Identities=30%  Similarity=0.572  Sum_probs=121.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc-ccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+++.++.|+|++|++|+|+||        .||+++.++.+||+|||++........ +.......++..|++||.+
T Consensus       101 ~~~~qi~~~L~~lH~~~i~H~di~p--------~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~  172 (257)
T cd05040         101 DYAVQIANGMRYLESKRFIHRDLAA--------RNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL  172 (257)
T ss_pred             HHHHHHHHHHHHHHhCCccccccCc--------ccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHh
Confidence            3567899999999999999999999        999999999999999999877644221 1222334466789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++++++| .|..||......+....+....    .. .......+..+.+++.+||..+|++||
T Consensus       173 ~~~~~~~~~Di~slG~~l~el~t-~g~~p~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp  246 (257)
T cd05040         173 RTRTFSHASDVWMFGVTLWEMFT-YGEEPWAGLSGSQILKKIDKEG----ER-LERPEACPQDIYNVMLQCWAHNPADRP  246 (257)
T ss_pred             cccCcCchhhhHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHhcC----Cc-CCCCccCCHHHHHHHHHHCCCCcccCC
Confidence            88889999999999999999995 2778998777666555544211    11 111234578999999999999999999


Q ss_pred             CHHHHHHHHH
Q psy4332         167 SFTEIHLFLQ  176 (188)
Q Consensus       167 s~~el~~~l~  176 (188)
                      ++.++...|.
T Consensus       247 s~~~~~~~l~  256 (257)
T cd05040         247 TFAALREFLP  256 (257)
T ss_pred             CHHHHHHHhc
Confidence            9999988764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.95  E-value=1.4e-28  Score=186.37  Aligned_cols=143  Identities=18%  Similarity=0.252  Sum_probs=117.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.++.|+|++||+||||||        +||+++.++.+||+|||++.......  .......|++.|+|||.+.+
T Consensus       101 ~~~qi~~~L~~lH~~giiHrDlkp--------~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05602         101 YAAEIASALGYLHSLNIVYRDLKP--------ENILLDSQGHIVLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHK  170 (325)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCH--------HHeEECCCCCEEEccCCCCcccccCC--CCcccccCCccccCHHHHcC
Confidence            567899999999999999999999        99999999999999999987543222  12234457889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+....       ....+..+..+.+++.+||+.+|.+|+++
T Consensus       171 ~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~  241 (325)
T cd05602         171 QPYDRTVDWWCLGAVLYEML--YGLPPFYSRNTAEMYDNILNKP-------LQLKPNITNSARHLLEGLLQKDRTKRLGA  241 (325)
T ss_pred             CCCCCccccccccHHHHHHh--cCCCCCCCCCHHHHHHHHHhCC-------cCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            88999999999999999999  6789999887766666554321       11224567899999999999999999987


Q ss_pred             HH
Q psy4332         169 TE  170 (188)
Q Consensus       169 ~e  170 (188)
                      .+
T Consensus       242 ~~  243 (325)
T cd05602         242 KD  243 (325)
T ss_pred             CC
Confidence            63

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.4e-29  Score=190.09  Aligned_cols=152  Identities=18%  Similarity=0.284  Sum_probs=119.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.++|+|||++.......  .......|+..|+|||.+.
T Consensus       100 ~~~~qil~al~~LH~~~ivHrDlkp--------~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  169 (330)
T cd05586         100 FYIAELVLALEHLHKYDIVYRDLKP--------ENILLDATGHIALCDFGLSKANLTDN--KTTNTFCGTTEYLAPEVLL  169 (330)
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCCH--------HHeEECCCCCEEEecCCcCcCCCCCC--CCccCccCCccccCHHHHc
Confidence            3567899999999999999999999        99999999999999999986543322  1223455888999999987


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +. .++.++||||+|+++|+|+  +|..||.+....+....+.....      ..+....+.++.+++.+||..||++||
T Consensus       170 ~~~~~~~~~DvwslGvil~ell--tG~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~li~~~L~~~P~~R~  241 (330)
T cd05586         170 DEKGYTKHVDFWSLGVLVFEMC--CGWSPFYAEDTQQMYRNIAFGKV------RFPKNVLSDEGRQFVKGLLNRNPQHRL  241 (330)
T ss_pred             CCCCCCCccceeccccEEEEec--cCCCCCCCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHHHcCCCHHHCC
Confidence            54 4788999999999999999  56789988776666555543211      222334678999999999999999998


Q ss_pred             ----CHHHH--HHHHHh
Q psy4332         167 ----SFTEI--HLFLQR  177 (188)
Q Consensus       167 ----s~~el--~~~l~~  177 (188)
                          ++.++  |+||.+
T Consensus       242 ~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         242 GAHRDAVELKEHPFFAD  258 (330)
T ss_pred             CCCCCHHHHhcCccccC
Confidence                57777  667754

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.95  E-value=1.4e-28  Score=189.39  Aligned_cols=155  Identities=20%  Similarity=0.288  Sum_probs=122.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||++........ .......|++.|+|||.+.+
T Consensus       147 ~~~qi~~aL~~LH~~~ivHrDLkp--------~NILl~~~~~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         147 YTAEVVLALDAIHSMGFIHRDVKP--------DNMLLDKSGHLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCH--------HHEEEcCCCCEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhcc
Confidence            456889999999999999999999        999999999999999999876543221 12234568899999999865


Q ss_pred             C----CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          89 R----KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        89 ~----~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .    .++.++||||+||++|+++  +|..||.+.........+.....   ..........+.++.+++.+||..+|++
T Consensus       218 ~~~~~~~~~~~DiwSlGvilyell--tG~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~~p~r  292 (370)
T cd05596         218 QGGDGYYGRECDWWSVGVFLYEML--VGDTPFYADSLVGTYSKIMDHKN---SLTFPDDIEISKQAKDLICAFLTDREVR  292 (370)
T ss_pred             CCCCCCCCCceeeeehhHHHHHHH--hCCCCcCCCCHHHHHHHHHcCCC---cCCCCCcCCCCHHHHHHHHHHccChhhc
Confidence            3    3788999999999999999  57899998877666666643211   1112222356889999999999999987


Q ss_pred             --CCCHHHH--HHHHHh
Q psy4332         165 --RPSFTEI--HLFLQR  177 (188)
Q Consensus       165 --Rps~~el--~~~l~~  177 (188)
                        |++++++  |+||+.
T Consensus       293 ~~R~s~~ell~h~~~~~  309 (370)
T cd05596         293 LGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             cCCCCHHHHhcCcccCC
Confidence              9999999  788765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=1.4e-28  Score=185.65  Aligned_cols=157  Identities=17%  Similarity=0.180  Sum_probs=109.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE----cCcceEEEccCCCCccCCCCcc-ccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV----GKKFEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill----~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~   82 (188)
                      .++.+++.|+.|+|++||+||||||        +||++    +..+.+||+|||+++....... ........+|+.|+|
T Consensus       112 ~i~~qi~~al~~LH~~~ivHrDlkp--------~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07868         112 SLLYQILDGIHYLHANWVLHRDLKP--------ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             HHHHHHHHHHHHHHhCCEEcCCCCH--------HHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccC
Confidence            4578899999999999999999999        99998    4557899999999876643321 112234567889999


Q ss_pred             hhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH---------HHHHHHhhcccCCCCC---------------
Q psy4332          83 WESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTD---------LEVLENISHLHADDGE---------------  137 (188)
Q Consensus        83 Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~---------~~~~~~~~~~~~~~~~---------------  137 (188)
                      ||.+.+. .++.++||||+||++++++  +|..||.....         ......+.........               
T Consensus       184 PE~~~~~~~~~~~~DiwslG~il~el~--~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T cd07868         184 PELLLGARHYTKAIDIWAIGCIFAELL--TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  261 (317)
T ss_pred             CHHHcCCCCcCchhhHHHHHHHHHHHH--hCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhh
Confidence            9999764 4788999999999999999  55678754321         1111111110000000               


Q ss_pred             ----------------cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHH
Q psy4332         138 ----------------FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLF  174 (188)
Q Consensus       138 ----------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~  174 (188)
                                      .........+.++.+++.+||..||++|||++|+  |+|
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~  316 (317)
T cd07868         262 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY  316 (317)
T ss_pred             hhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence                            0000011224568899999999999999999998  444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.95  E-value=1.2e-27  Score=175.53  Aligned_cols=154  Identities=26%  Similarity=0.546  Sum_probs=120.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++|++|+|+||        .||+++.++.+||+|||.++...... ........++..|++||.+
T Consensus       103 ~~~~~~i~~~l~~lH~~~i~H~dl~p--------~nili~~~~~~kl~d~g~~~~~~~~~-~~~~~~~~~~~~y~~pe~~  173 (256)
T cd05113         103 LEMCKDVCEGMAYLESKQFIHRDLAA--------RNCLVDDQGCVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL  173 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccccCc--------ceEEEcCCCCEEECCCccceecCCCc-eeecCCCccChhhCCHHHH
Confidence            34677889999999999999999999        99999999999999999887654332 1122233455679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|+++| .|..||......+....+.....     . ......+..+.+++.+||..+|++||
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~~-~g~~p~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~li~~cl~~~p~~Rp  246 (256)
T cd05113         174 LYSKFSSKSDVWAFGVLMWEVYS-LGKMPYERFNNSETVEKVSQGLR-----L-YRPHLASEKVYAIMYSCWHEKAEERP  246 (256)
T ss_pred             hcCcccchhHHHHHHHHHHHHhc-CCCCCcCcCCHHHHHHHHhcCCC-----C-CCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            88888999999999999999995 26789988776665555543221     1 11234578999999999999999999


Q ss_pred             CHHHHHHHHH
Q psy4332         167 SFTEIHLFLQ  176 (188)
Q Consensus       167 s~~el~~~l~  176 (188)
                      ++.+++..|+
T Consensus       247 ~~~~ll~~~~  256 (256)
T cd05113         247 TFQQLLSSIE  256 (256)
T ss_pred             CHHHHHHhhC
Confidence            9999977653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.9e-28  Score=182.49  Aligned_cols=153  Identities=17%  Similarity=0.235  Sum_probs=118.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++.......   ......++..|++||++.+
T Consensus       107 ~~~qi~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         107 YAAEITCGLEDLHRERIVYRDLKP--------ENILLDDYGHIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             HHHHHHHHHHHHHHCCcEecCCCH--------HHEEECCCCCEEEeeCCCceecCCCC---ccccccCCCCccCcHHhcC
Confidence            467888999999999999999999        99999999999999999987654322   1123457888999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++||||+|+++|+++  .|..||.+.......+.+.....   .........++..+.+++.+||..||++||  
T Consensus       176 ~~~~~~~Diws~G~~l~el~--~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05605         176 ERYTFSPDWWGLGCLIYEMI--EGKSPFRQRKEKVKREEVERRVK---EDQEEYSEKFSEAARSICRQLLTKDPGFRLGC  250 (285)
T ss_pred             CCCCccccchhHHHHHHHHH--HCCCCCCCCchhhHHHHHHHHhh---hcccccCcccCHHHHHHHHHHccCCHHHhcCC
Confidence            88899999999999999999  56789987665443333322111   111112245678999999999999999999  


Q ss_pred             ---CHHHH--HHHHHh
Q psy4332         167 ---SFTEI--HLFLQR  177 (188)
Q Consensus       167 ---s~~el--~~~l~~  177 (188)
                         +++++  |+||..
T Consensus       251 ~~~~~~~l~~~~~~~~  266 (285)
T cd05605         251 RGEGAEEVKAHPFFRT  266 (285)
T ss_pred             CCCCHHHHhcCcCccC
Confidence               88898  666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.6e-27  Score=174.71  Aligned_cols=152  Identities=31%  Similarity=0.650  Sum_probs=118.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.+|++|||+++...+... .......++..|+|||.+.
T Consensus       104 ~i~~qi~~~l~~lH~~~i~H~dl~p--------~ni~i~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~  174 (256)
T cd05059         104 DMCSDVCEAMEYLESNGFIHRDLAA--------RNCLVGEDNVVKVSDFGLARYVLDDQY-TSSQGTKFPVKWAPPEVFD  174 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccccccH--------hhEEECCCCcEEECCcccceecccccc-cccCCCCCCccccCHHHhc
Confidence            4567888999999999999999999        999999999999999998876543211 1112222345799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++| .+..||......+....+....     ... .....+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Di~slG~il~~l~~-~g~~p~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt  247 (256)
T cd05059         175 YSRFSSKSDVWSFGVLMWEVFS-EGKMPYERFSNSEVVESVSAGY-----RLY-RPKLAPTEVYTIMYSCWHEKPEDRPA  247 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHhc-cCCCCCCCCCHHHHHHHHHcCC-----cCC-CCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            8888999999999999999995 2678998776666555543221     111 12346789999999999999999999


Q ss_pred             HHHHHHHH
Q psy4332         168 FTEIHLFL  175 (188)
Q Consensus       168 ~~el~~~l  175 (188)
                      +.++...|
T Consensus       248 ~~~~l~~l  255 (256)
T cd05059         248 FKKLLSQL  255 (256)
T ss_pred             HHHHHHHh
Confidence            99998776

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=1.5e-27  Score=176.25  Aligned_cols=153  Identities=35%  Similarity=0.572  Sum_probs=118.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++|++|+|+||        +||+++.++.+|++|||++......   ........+..|++||++.
T Consensus       116 ~~~~~i~~al~~lH~~~i~H~dikp--------~nili~~~~~~kl~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~  184 (270)
T cd05047         116 HFAADVARGMDYLSQKQFIHRDLAA--------RNILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLN  184 (270)
T ss_pred             HHHHHHHHHHHHHHHCCEeeccccc--------ceEEEcCCCeEEECCCCCccccchh---hhccCCCCccccCChHHHc
Confidence            4556788999999999999999999        9999999999999999997533211   1111222355799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||||+++++++| .|..||.+....+....+....     . .......+.++.+++.+||..+|.+||+
T Consensus       185 ~~~~~~~~Di~slG~il~el~~-~g~~pf~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rps  257 (270)
T cd05047         185 YSVYTTNSDVWSYGVLLWEIVS-LGGTPYCGMTCAELYEKLPQGY-----R-LEKPLNCDDEVYDLMRQCWREKPYERPS  257 (270)
T ss_pred             cCCCCchhhHHHHHHHHHHHHc-CCCCCccccCHHHHHHHHhCCC-----C-CCCCCcCCHHHHHHHHHHcccChhhCCC
Confidence            8888999999999999999995 2678998776655555443211     1 1112345678999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       258 ~~~il~~l~~~  268 (270)
T cd05047         258 FAQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHHHh
Confidence            99999888765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.95  E-value=1.9e-27  Score=174.35  Aligned_cols=152  Identities=28%  Similarity=0.588  Sum_probs=119.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++++|||.+........ .......++..|+|||.+.
T Consensus       104 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  174 (256)
T cd05114         104 SMCQDVCEGMEYLERNSFIHRDLAA--------RNCLVSSTGVVKVSDFGMTRYVLDDEY-TSSSGAKFPVKWSPPEVFN  174 (256)
T ss_pred             HHHHHHHHHHHHHHHCCccccccCc--------ceEEEcCCCeEEECCCCCccccCCCce-eccCCCCCchhhCChhhcc
Confidence            3566788999999999999999999        999999999999999998876543221 1112233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|++++++++ .|..||......+....+.....     . ......+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Di~s~G~~l~el~~-~g~~p~~~~~~~~~~~~i~~~~~-----~-~~~~~~~~~~~~li~~c~~~~p~~Rps  247 (256)
T cd05114         175 FSKYSSKSDVWSFGVLMWEVFT-EGKMPFEKKSNYEVVEMISRGFR-----L-YRPKLASMTVYEVMYSCWHEKPEGRPT  247 (256)
T ss_pred             cCccchhhhhHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHCCCC-----C-CCCCCCCHHHHHHHHHHccCCcccCcC
Confidence            8888999999999999999995 26789988877666666654221     1 112335678999999999999999999


Q ss_pred             HHHHHHHH
Q psy4332         168 FTEIHLFL  175 (188)
Q Consensus       168 ~~el~~~l  175 (188)
                      +++++..|
T Consensus       248 ~~~l~~~l  255 (256)
T cd05114         248 FAELLRAI  255 (256)
T ss_pred             HHHHHHhh
Confidence            99998765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.95  E-value=1e-28  Score=187.12  Aligned_cols=151  Identities=19%  Similarity=0.278  Sum_probs=120.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.++.|+|++||+|+||||        +||+++.++.+||+|||+++......  .......+++.|+|||.+.
T Consensus       100 ~~~~qi~~al~~lH~~givH~Dlkp--------~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  169 (325)
T cd05604         100 FYAAEIASALGYLHSINIVYRDLKP--------ENILLDSQGHVVLTDFGLCKEGIAQS--DTTTTFCGTPEYLAPEVIR  169 (325)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCH--------HHeEECCCCCEEEeecCCcccCCCCC--CCcccccCChhhCCHHHHc
Confidence            3567899999999999999999999        99999999999999999986542221  1223445788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+|+  .|..||.+.+..+....+....       ....+..+..+.+++.+|++.+|++||+
T Consensus       170 ~~~~~~~~DvwslG~il~el~--~G~~pf~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~ll~~~p~~R~~  240 (325)
T cd05604         170 KQPYDNTVDWWCLGAVLYEML--YGLPPFYCRDVAEMYDNILHKP-------LVLRPGASLTAWSILEELLEKDRQRRLG  240 (325)
T ss_pred             CCCCCCcCccccccceehhhh--cCCCCCCCCCHHHHHHHHHcCC-------ccCCCCCCHHHHHHHHHHhccCHHhcCC
Confidence            888999999999999999999  6778998887766666554321       1112346788999999999999999998


Q ss_pred             HH----HH--HHHHHh
Q psy4332         168 FT----EI--HLFLQR  177 (188)
Q Consensus       168 ~~----el--~~~l~~  177 (188)
                      +.    ++  |+||+.
T Consensus       241 ~~~~~~~i~~h~~f~~  256 (325)
T cd05604         241 AKEDFLEIQEHPFFES  256 (325)
T ss_pred             CCCCHHHHhcCCCcCC
Confidence            74    55  556654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=4.2e-28  Score=193.08  Aligned_cols=161  Identities=16%  Similarity=0.108  Sum_probs=116.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++..+..... .......|+..|++||++.
T Consensus       271 ~i~~ql~~aL~yLH~~gIiHrDLKP--------~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~  341 (501)
T PHA03210        271 AIMKQLLCAVEYIHDKKLIHRDIKL--------ENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILA  341 (501)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhc
Confidence            4677899999999999999999999        999999999999999999877643321 1222356788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCC-CCCc------------------------cc
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHAD-DGEF------------------------IY  140 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~-~~~~------------------------~~  140 (188)
                      +..++.++||||+||++|||+++ +..|+....  ......++...... ....                        ..
T Consensus       342 ~~~~~~~~DiwSlGvil~ell~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~  420 (501)
T PHA03210        342 GDGYCEITDIWSCGLILLDMLSH-DFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPL  420 (501)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHC-CCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhH
Confidence            88899999999999999999964 345554322  22222221111000 0000                        00


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ......+.++.+++.+||..||++||++.|+  |+||...
T Consensus       421 ~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        421 IRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             HHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            0111245678888999999999999999999  7888653

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.95  E-value=2e-28  Score=185.24  Aligned_cols=142  Identities=18%  Similarity=0.210  Sum_probs=114.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+|+.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.+
T Consensus       101 ~~~qi~~~L~~lH~~~ivH~Dlkp--------~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  170 (321)
T cd05603         101 YAAEVASAIGYLHSLNIIYRDLKP--------ENILLDSQGHVVLTDFGLCKEGVEPE--ETTSTFCGTPEYLAPEVLRK  170 (321)
T ss_pred             HHHHHHHHHHHHHHCCeEeccCCH--------HHeEECCCCCEEEccCCCCccCCCCC--CccccccCCcccCCHHHhcC
Confidence            567899999999999999999999        99999999999999999976532221  12234457889999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++  .|..||.+.+.......+....       .......+.++.+++.+||+.||++|+++
T Consensus       171 ~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~  241 (321)
T cd05603         171 EPYDRTVDWWCLGAVLYEML--YGLPPFYSRDVSQMYDNILHKP-------LQLPGGKTVAACDLLVGLLHKDQRRRLGA  241 (321)
T ss_pred             CCCCCcCcccccchhhhhhh--cCCCCCCCCCHHHHHHHHhcCC-------CCCCCCCCHHHHHHHHHHccCCHhhcCCC
Confidence            88999999999999999999  6788998887666665554321       11123457789999999999999999975


Q ss_pred             H
Q psy4332         169 T  169 (188)
Q Consensus       169 ~  169 (188)
                      .
T Consensus       242 ~  242 (321)
T cd05603         242 K  242 (321)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=8.5e-28  Score=180.43  Aligned_cols=155  Identities=34%  Similarity=0.552  Sum_probs=118.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+|+||        +||+++.++.+||+|||++......   ........+..|++||.+.
T Consensus       128 ~~~~qi~~al~~LH~~gi~H~dlkp--------~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~  196 (303)
T cd05088         128 HFAADVARGMDYLSQKQFIHRDLAA--------RNILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLN  196 (303)
T ss_pred             HHHHHHHHHHHHHHhCCccccccch--------heEEecCCCcEEeCccccCcccchh---hhcccCCCcccccCHHHHh
Confidence            3566889999999999999999999        9999999999999999997543211   1112223356799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++++++| .|..||.+....+....+....     . .......+.++.+++.+||..+|++||+
T Consensus       197 ~~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~  269 (303)
T cd05088         197 YSVYTTNSDVWSYGVLLWEIVS-LGGTPYCGMTCAELYEKLPQGY-----R-LEKPLNCDDEVYDLMRQCWREKPYERPS  269 (303)
T ss_pred             ccCCcccccchhhhhHHHHHHh-cCCCCcccCChHHHHHHHhcCC-----c-CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            7778899999999999999996 2678998776655554442211     1 1111335678999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +++++..++++..
T Consensus       270 ~~~il~~l~~~~~  282 (303)
T cd05088         270 FAQILVSLNRMLE  282 (303)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999887776543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=1.8e-27  Score=175.73  Aligned_cols=158  Identities=32%  Similarity=0.548  Sum_probs=115.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++++|||++................++..|+|||++.
T Consensus       104 ~~~~qi~~al~~lH~~~i~H~dlkp--------~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05087         104 RMACEIALGLLHLHKNNFIHSDLAL--------RNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVD  175 (269)
T ss_pred             HHHHHHHHHHHHHHHCCEeccccCc--------ceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhc
Confidence            3567889999999999999999999        99999999999999999986554332222223344667899999986


Q ss_pred             cC-------CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          88 LR-------KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        88 ~~-------~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      +.       .++.++|+||+|++++++++ .|..||......+........... ...........+..+.+++.+|| .
T Consensus       176 ~~~~~~~~~~~~~~~DiwslG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~c~-~  252 (269)
T cd05087         176 EVHGNLLVVDQTKESNVWSLGVTIWELFE-LGSQPYRHLSDEQVLTYTVREQQL-KLPKPRLKLPLSDRWYEVMQFCW-L  252 (269)
T ss_pred             cccccccccCCCccchhHHHHHHHHHHHh-CCCCCCCCCChHHHHHHHhhcccC-CCCCCccCCCCChHHHHHHHHHh-c
Confidence            32       34779999999999999995 267899877655544332221110 01111111235678999999999 6


Q ss_pred             CCCCCCCHHHHHHHHH
Q psy4332         161 SPTERPSFTEIHLFLQ  176 (188)
Q Consensus       161 dp~~Rps~~el~~~l~  176 (188)
                      +|++||++++++..|+
T Consensus       253 ~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         253 QPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CcccCCCHHHHHHHhc
Confidence            8999999999998775

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=6.6e-28  Score=178.08  Aligned_cols=146  Identities=20%  Similarity=0.309  Sum_probs=113.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++|+|+|+||        .||+++.++.++|+|||++.......  .......++..|++||++.+
T Consensus       116 ~~~qi~~~l~~LH~~~ivh~dl~~--------~nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~  185 (272)
T cd06637         116 ICREILRGLSHLHQHKVIHRDIKG--------QNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIAC  185 (272)
T ss_pred             HHHHHHHHHHHHHHCCCccCCCCH--------HHEEECCCCCEEEccCCCceeccccc--ccCCcccccccccCHhHhcc
Confidence            567899999999999999999999        99999999999999999987653321  12234557788999999862


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           ..++.++|+||+|+++|+++  .|..||..............     ...........+.++.+++.+||..+|.
T Consensus       186 ~~~~~~~~~~~~Dv~slGv~l~el~--~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~  258 (272)
T cd06637         186 DENPDATYDFKSDLWSLGITAIEMA--EGAPPLCDMHPMRALFLIPR-----NPAPRLKSKKWSKKFQSFIESCLVKNHS  258 (272)
T ss_pred             ccCcCCCCCchhhHHHHHHHHHHHH--hCCCCccccCHHHHHHHHhc-----CCCCCCCCCCcCHHHHHHHHHHcCCChh
Confidence                 34778999999999999999  56778876654443333221     1111223345678999999999999999


Q ss_pred             CCCCHHHH
Q psy4332         164 ERPSFTEI  171 (188)
Q Consensus       164 ~Rps~~el  171 (188)
                      +||++.++
T Consensus       259 ~Rpt~~~i  266 (272)
T cd06637         259 QRPTTEQL  266 (272)
T ss_pred             hCCCHHHH
Confidence            99999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=1.1e-27  Score=179.18  Aligned_cols=156  Identities=23%  Similarity=0.325  Sum_probs=120.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++.......  .......+++.|++||.+.
T Consensus       120 ~i~~ql~~aL~~LH~~gi~H~dLkp--------~Nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  189 (296)
T cd06654         120 AVCRECLQALEFLHSNQVIHRDIKS--------DNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVT  189 (296)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEEcCCCCEEECccccchhccccc--cccCcccCCccccCHHHHc
Confidence            4566889999999999999999999        99999999999999999876543221  1122345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++  .|..||....+..........    ...........+..+.+++.+||..+|++||+
T Consensus       190 ~~~~~~~~Dv~s~Gvil~~l~--~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  263 (296)
T cd06654         190 RKAYGPKVDIWSLGIMAIEMI--EGEPPYLNENPLRALYLIATN----GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS  263 (296)
T ss_pred             CCCCCccchHHHHHHHHHHHH--hCCCCCCCCCHHHhHHHHhcC----CCCCCCCccccCHHHHHHHHHHCcCCcccCcC
Confidence            888889999999999999999  567899877654433322211    11111122446778999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      +.++  ++|+....
T Consensus       264 ~~eil~~~~~~~~~  277 (296)
T cd06654         264 AKELLQHQFLKIAK  277 (296)
T ss_pred             HHHHhhChhhhccC
Confidence            9999  67777553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0603|consensus

Probab=99.95  E-value=3.4e-28  Score=189.12  Aligned_cols=144  Identities=25%  Similarity=0.390  Sum_probs=119.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE-cCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV-GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+|+.++.|||++|++|||+||        +|||+ ++.++++|+|||.++.....     .....-|..|.|||++
T Consensus       419 ~w~~~lv~Av~~LH~~gvvhRDLkp--------~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl  485 (612)
T KOG0603|consen  419 QWAAELVSAVDYLHEQGVVHRDLKP--------GNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVL  485 (612)
T ss_pred             HHHHHHHHHHHHHHhcCeeecCCCh--------hheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhh
Confidence            4577889999999999999999999        99999 68899999999998776433     2344556789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ....++..+|+||+|+++|+|+  +|..||...+.. ++..++....     .    ....+++++++++.||+.||.+|
T Consensus       486 ~~~~yt~acD~WSLGvlLy~ML--~G~tp~~~~P~~~ei~~~i~~~~-----~----s~~vS~~AKdLl~~LL~~dP~~R  554 (612)
T KOG0603|consen  486 AIQEYTEACDWWSLGVLLYEML--TGRTLFAAHPAGIEIHTRIQMPK-----F----SECVSDEAKDLLQQLLQVDPALR  554 (612)
T ss_pred             ccCCCCcchhhHHHHHHHHHHH--hCCCccccCCchHHHHHhhcCCc-----c----ccccCHHHHHHHHHhccCChhhC
Confidence            9888999999999999999999  677899876544 4444443211     1    14568899999999999999999


Q ss_pred             CCHHHH--HHHH
Q psy4332         166 PSFTEI--HLFL  175 (188)
Q Consensus       166 ps~~el--~~~l  175 (188)
                      +++.++  |+|+
T Consensus       555 l~~~~i~~h~w~  566 (612)
T KOG0603|consen  555 LGADEIGAHPWF  566 (612)
T ss_pred             cChhhhccCcch
Confidence            999999  8888

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=1.7e-27  Score=178.24  Aligned_cols=157  Identities=23%  Similarity=0.314  Sum_probs=122.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++|++|+|+||        +||+++.++.++|+|||++........  ......++..|++||.+.
T Consensus       119 ~i~~~l~~al~~LH~~~i~H~dL~p--------~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  188 (296)
T cd06655         119 AVCRECLQALEFLHANQVIHRDIKS--------DNVLLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVT  188 (296)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEccCccchhcccccc--cCCCcCCCccccCcchhc
Confidence            4556788999999999999999999        999999999999999998776533221  123345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++  +|..||...........+...    ...........+..+.+++.+||..||++||+
T Consensus       189 ~~~~~~~~Dv~slGvil~~ll--tg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt  262 (296)
T cd06655         189 RKAYGPKVDIWSLGIMAIEMV--EGEPPYLNENPLRALYLIATN----GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS  262 (296)
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhc----CCcccCCcccCCHHHHHHHHHHhhcChhhCCC
Confidence            888899999999999999999  567899887654444333211    11111122456788999999999999999999


Q ss_pred             HHHH--HHHHHhccC
Q psy4332         168 FTEI--HLFLQRKNL  180 (188)
Q Consensus       168 ~~el--~~~l~~~~~  180 (188)
                      +.++  |+|++....
T Consensus       263 ~~~il~~~~~~~~~~  277 (296)
T cd06655         263 AKELLQHPFLKLAKP  277 (296)
T ss_pred             HHHHhhChHhhhccc
Confidence            9999  889987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0577|consensus

Probab=99.95  E-value=1.9e-28  Score=189.67  Aligned_cols=150  Identities=24%  Similarity=0.368  Sum_probs=129.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh-
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   87 (188)
                      ++.+.+.||.|||+.+.||||||.        .|||+++.|.+||+|||++......      .++.|||.|||||++. 
T Consensus       131 i~~gaL~gLaYLHS~~~IHRDiKA--------GNILLse~g~VKLaDFGSAsi~~PA------nsFvGTPywMAPEVILA  196 (948)
T KOG0577|consen  131 ITHGALQGLAYLHSHNRIHRDIKA--------GNILLSEPGLVKLADFGSASIMAPA------NSFVGTPYWMAPEVILA  196 (948)
T ss_pred             HHHHHHHHHHHHHHhhHHhhhccc--------cceEecCCCeeeeccccchhhcCch------hcccCCccccchhHhee
Confidence            456677899999999999999999        9999999999999999998766443      4678999999999996 


Q ss_pred             --cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 --LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 --~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                        .+.++-++||||+|+.+.|+.  .+.+|+..++.....+.|..     +..+....+..++.+++|+..||++-|.+|
T Consensus       197 MDEGqYdgkvDvWSLGITCIELA--ERkPPlFnMNAMSALYHIAQ-----NesPtLqs~eWS~~F~~Fvd~CLqKipqeR  269 (948)
T KOG0577|consen  197 MDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQ-----NESPTLQSNEWSDYFRNFVDSCLQKIPQER  269 (948)
T ss_pred             ccccccCCccceeeccchhhhhh--hcCCCccCchHHHHHHHHHh-----cCCCCCCCchhHHHHHHHHHHHHhhCcccC
Confidence              356899999999999999999  89999999998888877753     444555667889999999999999999999


Q ss_pred             CCHHHH--HHHHHhcc
Q psy4332         166 PSFTEI--HLFLQRKN  179 (188)
Q Consensus       166 ps~~el--~~~l~~~~  179 (188)
                      ||.+++  |+|+.+.+
T Consensus       270 ptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  270 PTSEELLKHRFVLRER  285 (948)
T ss_pred             CcHHHHhhcchhccCC
Confidence            999998  67766543

>KOG0579|consensus

Probab=99.95  E-value=3.2e-28  Score=190.00  Aligned_cols=157  Identities=24%  Similarity=0.353  Sum_probs=129.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      -+|.+++.||.|||++.|||||||.        .|||++.+|.++|+|||.+......  ........||++|||||+..
T Consensus       134 vvc~q~ldALn~LHs~~iIHRDLKA--------GNiL~TldGdirLADFGVSAKn~~t--~qkRDsFIGTPYWMAPEVvm  203 (1187)
T KOG0579|consen  134 VVCYQVLDALNWLHSQNIIHRDLKA--------GNILLTLDGDIRLADFGVSAKNKST--RQKRDSFIGTPYWMAPEVVM  203 (1187)
T ss_pred             HHHHHHHHHHHHHhhcchhhhhccc--------cceEEEecCcEeeecccccccchhH--HhhhccccCCcccccchhee
Confidence            3567888999999999999999999        9999999999999999986544222  12346788999999999864


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                           ..+|.+++||||||+.+.||.  .+.+|....++...+-++...    .......++..+..+.+|+.+||..||
T Consensus       204 CET~KD~PYDykaDiWSlGITLIEMA--qiEPPHhelnpMRVllKiaKS----ePPTLlqPS~Ws~~F~DfLk~cL~Knp  277 (1187)
T KOG0579|consen  204 CETFKDQPYDYKADIWSLGITLIEMA--QIEPPHHELNPMRVLLKIAKS----EPPTLLQPSHWSRSFSDFLKRCLVKNP  277 (1187)
T ss_pred             eccccCCCchhhhhHHhhhhHHHHHh--ccCCCccccchHHHHHHHhhc----CCCcccCcchhhhHHHHHHHHHHhcCC
Confidence                 567899999999999999999  888999999988888777542    122223345678899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccC
Q psy4332         163 TERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~  180 (188)
                      ..||++.++  |+|++.+.+
T Consensus       278 ~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  278 RNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             ccCCCHHHHhhCcccccCCc
Confidence            999999999  889886654

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.7e-27  Score=175.63  Aligned_cols=157  Identities=28%  Similarity=0.494  Sum_probs=123.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        .||+++.++.+||+|||++................++..|++||.+.
T Consensus       113 ~~~~qi~~~l~~LH~~~i~H~di~p--------~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05057         113 NWCVQIAKGMSYLEEKRLVHRDLAA--------RNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL  184 (279)
T ss_pred             HHHHHHHHHHHHHHhCCEEecccCc--------ceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhh
Confidence            4567889999999999999999999        99999999999999999987665332211112222356799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ...++.++|+||+|+++++++| .|..||.+....+....+....     . .......+.++.+++.+||..+|+.||+
T Consensus       185 ~~~~~~~~Di~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~l~~~p~~Rp~  257 (279)
T cd05057         185 HRIYTHKSDVWSYGVTVWELMT-FGAKPYEGIPAVEIPDLLEKGE-----R-LPQPPICTIDVYMVLVKCWMIDAESRPT  257 (279)
T ss_pred             cCCcCchhhHHHHHHHHHHHhc-CCCCCCCCCCHHHHHHHHhCCC-----C-CCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence            7888999999999999999995 2788998887766665554321     1 1112345678999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++...|.++-
T Consensus       258 ~~~l~~~l~~~~  269 (279)
T cd05057         258 FKELINEFSKMA  269 (279)
T ss_pred             HHHHHHHHHHHH
Confidence            999998888763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.95  E-value=4.2e-29  Score=189.37  Aligned_cols=153  Identities=17%  Similarity=0.269  Sum_probs=115.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||+++......  .......|++.|+|||.+.
T Consensus       100 ~~~~qi~~al~~lH~~~ivHrDlkp--------~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  169 (327)
T cd05617         100 FYAAEICIALNFLHERGIIYRDLKL--------DNVLLDADGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILR  169 (327)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCH--------HHEEEeCCCCEEEeccccceeccCCC--CceecccCCcccCCHHHHC
Confidence            4677899999999999999999999        99999999999999999986532221  1223456788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC------CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGL------TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +..++.++||||+|+++|+++  +|..||...      ...+........     .. .......+..+.+++.+||..|
T Consensus       170 ~~~~~~~~DiwslGvil~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~-~~~p~~~~~~~~~li~~~L~~d  241 (327)
T cd05617         170 GEEYGFSVDWWALGVLMFEMM--AGRSPFDIITDNPDMNTEDYLFQVILE-----KP-IRIPRFLSVKASHVLKGFLNKD  241 (327)
T ss_pred             CCCCCchheeehhHHHHHHHH--hCCCCCCccCCCcccccHHHHHHHHHh-----CC-CCCCCCCCHHHHHHHHHHhccC
Confidence            888999999999999999999  567888532      111222222111     01 1112346788999999999999


Q ss_pred             CCCCCCH------HHH--HHHHHhc
Q psy4332         162 PTERPSF------TEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rps~------~el--~~~l~~~  178 (188)
                      |++|+++      +++  |+||+.+
T Consensus       242 P~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         242 PKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            9999985      577  7777654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.95  E-value=9.7e-28  Score=182.36  Aligned_cols=158  Identities=21%  Similarity=0.337  Sum_probs=116.7

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+++.++.|+|+ ++|+|+||||        +||+++.++.+||+|||++......    ......++..|+|||++
T Consensus       107 ~~~~~l~~~l~~lH~~~~ivH~dlkp--------~Nili~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~  174 (333)
T cd06650         107 KVSIAVIKGLTYLREKHKIMHRDVKP--------SNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL  174 (333)
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCCh--------hhEEEcCCCCEEEeeCCcchhhhhh----ccccCCCCccccCHHHh
Confidence            455678899999997 4799999999        9999999999999999998655322    12234577889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC--------------------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD--------------------------------  134 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~--------------------------------  134 (188)
                      .+..++.++|+||+||++|+++  .|..||...........+......                                
T Consensus       175 ~~~~~~~~~DvwslG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (333)
T cd06650         175 QGTHYSVQSDIWSMGLSLVEMA--IGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIF  252 (333)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHH--HCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHH
Confidence            8888899999999999999999  567788765443332211100000                                


Q ss_pred             -------CCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         135 -------DGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       135 -------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                             .......+...++.++.+++.+||+.||++||+++|+  |+||+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         253 ELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             HHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                   0000011112356789999999999999999999999  88998653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=2e-27  Score=173.56  Aligned_cols=153  Identities=32%  Similarity=0.560  Sum_probs=118.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++++|+|+||        +||+++.++.++|+|||++.................+..|+|||.+.+
T Consensus        98 ~~~~~~~~l~~lH~~~i~h~di~p--------~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  169 (251)
T cd05041          98 MSLDAAAGMEYLESKNCIHRDLAA--------RNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY  169 (251)
T ss_pred             HHHHHHHHHHHHHhCCEehhhcCc--------ceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhcc
Confidence            456778899999999999999999        999999999999999999876542211111122233566999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++++++|+ +..||...........+....     . .......+.++.+++.+||..+|++||++
T Consensus       170 ~~~~~~~Di~slG~i~~~l~t~-~~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  242 (251)
T cd05041         170 GRYTSESDVWSYGILLWETFSL-GDTPYPGMSNQQTRERIESGY-----R-MPAPQLCPEEIYRLMLQCWAYDPENRPSF  242 (251)
T ss_pred             CCCCcchhHHHHHHHHHHHHhc-cCCCCccCCHHHHHHHHhcCC-----C-CCCCccCCHHHHHHHHHHhccChhhCcCH
Confidence            8889999999999999999963 678888877655555443211     1 11123457899999999999999999999


Q ss_pred             HHHHHHHH
Q psy4332         169 TEIHLFLQ  176 (188)
Q Consensus       169 ~el~~~l~  176 (188)
                      .|+...|+
T Consensus       243 ~ell~~l~  250 (251)
T cd05041         243 SEIYNELQ  250 (251)
T ss_pred             HHHHHHhh
Confidence            99988775

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=8.8e-28  Score=180.10  Aligned_cols=161  Identities=19%  Similarity=0.228  Sum_probs=119.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++.......  .......+++.|++||.+.+
T Consensus       109 ~~~qi~~aL~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~  178 (301)
T cd07873         109 FLFQLLRGLNYCHRRKVLHRDLKP--------QNLLINERGELKLADFGLARAKSIPT--KTYSNEVVTLWYRPPDILLG  178 (301)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCCH--------HHEEECCCCcEEECcCcchhccCCCC--CcccccceeecccCcHHHhC
Confidence            567889999999999999999999        99999999999999999986543322  12223445778999999865


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----------cc------------cCCCC
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----------FI------------YLPTP  144 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~------------~~~~~  144 (188)
                      . .++.++||||+|+++++++  +|..||.+.+..+....+.........           ..            .....
T Consensus       179 ~~~~~~~~Dv~slG~~l~el~--tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (301)
T cd07873         179 STDYSTQIDMWGVGCIFYEMS--TGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAP  256 (301)
T ss_pred             CCCCccHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcC
Confidence            4 4788999999999999999  567888877655444333221110000           00            00113


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ..+.++.+++.+||..||++|||++|+  |+||+.+.+.
T Consensus       257 ~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~  295 (301)
T cd07873         257 RLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER  295 (301)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence            457789999999999999999999999  7899877643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=8.7e-28  Score=178.90  Aligned_cols=155  Identities=16%  Similarity=0.257  Sum_probs=119.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++.......   ......++..|+|||.+.
T Consensus       106 ~~~~ql~~~l~~lH~~~iiH~dikp--------~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~  174 (285)
T cd05632         106 FYAAEILCGLEDLHRENTVYRDLKP--------ENILLDDYGHIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLN  174 (285)
T ss_pred             HHHHHHHHHHHHHHhCCeeecCCCH--------HHEEECCCCCEEEecCCcceecCCCC---cccCCCCCcCccChHHhc
Confidence            3567889999999999999999999        99999999999999999886553322   122345788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  +|..||.+.........+........   .......+.++.+++.+||+.||++||+
T Consensus       175 ~~~~~~~~Di~slG~~l~~l~--~g~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05632         175 NQRYTLSPDYWGLGCLIYEMI--EGQSPFRGRKEKVKREEVDRRVLETE---EVYSAKFSEEAKSICKMLLTKDPKQRLG  249 (285)
T ss_pred             CCCCCcccchHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhhhccc---cccCccCCHHHHHHHHHHccCCHhHcCC
Confidence            888999999999999999999  56789987765443333322111111   1122456778999999999999999999


Q ss_pred             -----HHHH--HHHHHhc
Q psy4332         168 -----FTEI--HLFLQRK  178 (188)
Q Consensus       168 -----~~el--~~~l~~~  178 (188)
                           +.++  |+||.+.
T Consensus       250 ~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         250 CQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             CcccChHHHHcChhhhcC
Confidence                 6777  6777654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.95  E-value=2.4e-28  Score=185.39  Aligned_cols=152  Identities=16%  Similarity=0.280  Sum_probs=114.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||+++......  .......|+..|+|||.+.
T Consensus       100 ~i~~qi~~~l~~lH~~~ivH~Dikp--------~Nili~~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~  169 (329)
T cd05618         100 FYSAEISLALNYLHERGIIYRDLKL--------DNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILR  169 (329)
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCH--------HHEEECCCCCEEEeeCCccccccCCC--CccccccCCccccCHHHHc
Confidence            3567899999999999999999999        99999999999999999986543222  1223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--------HHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--------DLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      +..++.++|+||+|+++|+++  +|..||....        ... ....+...      . .......+.++.+++.+||
T Consensus       170 ~~~~~~~~DiwslG~il~el~--~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~------~-~~~p~~~~~~~~~ll~~~L  240 (329)
T cd05618         170 GEDYGFSVDWWALGVLMFEMM--AGRSPFDIVGSSDNPDQNTEDYLFQVILEK------Q-IRIPRSLSVKAASVLKSFL  240 (329)
T ss_pred             CCCCCCccceecccHHHHHHh--hCCCCCccCCCcCCcccccHHHHHHHHhcC------C-CCCCCCCCHHHHHHHHHHh
Confidence            888999999999999999999  5678885211        111 12222111      1 1112456788999999999


Q ss_pred             ccCCCCCCCH------HHH--HHHHHhc
Q psy4332         159 KRSPTERPSF------TEI--HLFLQRK  178 (188)
Q Consensus       159 ~~dp~~Rps~------~el--~~~l~~~  178 (188)
                      ..||++||++      .++  |+||+..
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         241 NKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             cCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            9999999984      677  7777543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.95  E-value=4.1e-28  Score=187.52  Aligned_cols=157  Identities=20%  Similarity=0.269  Sum_probs=118.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--------------------
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--------------------   68 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--------------------   68 (188)
                      .+.+|+.++.|+|++||+||||||        +||+++.++.+||+|||++.........                    
T Consensus       106 ~~~qi~~aL~~LH~~givHrDlKp--------~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (381)
T cd05626         106 YIAELTLAIESVHKMGFIHRDIKP--------DNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLW  177 (381)
T ss_pred             HHHHHHHHHHHHHhCCeeecCCcH--------HHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccc
Confidence            456888999999999999999999        9999999999999999987543110000                    


Q ss_pred             -------------------------cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy4332          69 -------------------------RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE  123 (188)
Q Consensus        69 -------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~  123 (188)
                                               .......||+.|+|||.+.+..++.++||||+||++|+++  +|..||......+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ell--tG~~Pf~~~~~~~  255 (381)
T cd05626         178 DDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEML--VGQPPFLAPTPTE  255 (381)
T ss_pred             ccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHH--hCCCCCcCCCHHH
Confidence                                     0011345889999999998888999999999999999999  5678998877665


Q ss_pred             HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh--ccCCCCCCCHHHH--HHHHHhc
Q psy4332         124 VLENISHLHADDGEFIYLPTPQTTKDILDLMNECW--KRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl--~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ....+..+..   ..........+.++.+++.+|+  ..++..|+++.++  |+||++.
T Consensus       256 ~~~~i~~~~~---~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         256 TQLKVINWEN---TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             HHHHHHcccc---ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            5555443221   1112223356789999999854  5566669999999  8888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.95  E-value=2.9e-28  Score=184.95  Aligned_cols=151  Identities=17%  Similarity=0.292  Sum_probs=114.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||+++.......  ......|++.|+|||.+.
T Consensus       100 ~~~~qi~~~l~~lH~~~ivH~dlkp--------~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~  169 (329)
T cd05588         100 FYSAEISLALNFLHERGIIYRDLKL--------DNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILR  169 (329)
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCH--------HHeEECCCCCEEECcCccccccccCCC--ccccccCCccccCHHHHc
Confidence            3567889999999999999999999        999999999999999999865322221  223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--------HHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--------DLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      +..++.++|+||+|+++|+++  +|..||....        ..+ ....+...      . .......+.++.+++.+||
T Consensus       170 ~~~~~~~~DiwslG~~l~el~--~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~p~~~~~~~~~li~~~L  240 (329)
T cd05588         170 GEDYGFSVDWWALGVLMFEMM--AGRSPFDIVGMSDNPDQNTEDYLFQVILEK------Q-IRIPRSLSVKASSVLKGFL  240 (329)
T ss_pred             CCCCCCccceechHHHHHHHH--HCCCCcccccccccccccchHHHHHHHHcC------C-CCCCCCCCHHHHHHHHHHh
Confidence            888999999999999999999  5678885321        111 12222211      1 1112456788999999999


Q ss_pred             ccCCCCCCC------HHHH--HHHHHh
Q psy4332         159 KRSPTERPS------FTEI--HLFLQR  177 (188)
Q Consensus       159 ~~dp~~Rps------~~el--~~~l~~  177 (188)
                      ..||++|++      ++++  |+||..
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         241 NKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             ccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            999999997      5777  677764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0589|consensus

Probab=99.95  E-value=4.1e-28  Score=184.37  Aligned_cols=145  Identities=20%  Similarity=0.280  Sum_probs=126.2

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      ..+++.|+.|+|++.|+|||+|+        .||+++.++.+||.|||+++......  .......||+.|++||.+.+-
T Consensus       112 ~~Q~~~av~ylH~~~iLHRDlK~--------~Nifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~  181 (426)
T KOG0589|consen  112 FVQILLAVNYLHENRVLHRDLKC--------ANIFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDI  181 (426)
T ss_pred             HHHHHHHHHHHHhhhhhcccchh--------hhhhccccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCC
Confidence            35788999999999999999999        99999999999999999999886542  244567799999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHH
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFT  169 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  169 (188)
                      ++..|+||||+||++||++  +-..+|.+.+...+..++....      ..+.....+.+++.++..|+..+|+.||++.
T Consensus       182 pYn~KSDiWsLGC~~yEm~--~lk~aF~a~~m~~Li~ki~~~~------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~  253 (426)
T KOG0589|consen  182 PYNEKSDIWSLGCCLYEMC--TLKPAFKASNMSELILKINRGL------YSPLPSMYSSELRSLVKSMLRKNPEHRPSAL  253 (426)
T ss_pred             CCCccCcchhhcchHHHHH--hcccccCccchHHHHHHHhhcc------CCCCCccccHHHHHHHHHHhhcCCccCCCHH
Confidence            9999999999999999999  5578999999888888887543      2233356688999999999999999999999


Q ss_pred             HHH
Q psy4332         170 EIH  172 (188)
Q Consensus       170 el~  172 (188)
                      +++
T Consensus       254 ~LL  256 (426)
T KOG0589|consen  254 ELL  256 (426)
T ss_pred             HHh
Confidence            993

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.95  E-value=1.7e-27  Score=181.75  Aligned_cols=156  Identities=29%  Similarity=0.515  Sum_probs=119.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        .||+++.++.+|++|||++................++..|++||.+.+
T Consensus       184 ~~~qi~~al~~lH~~~i~H~dikp--------~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  255 (343)
T cd05103         184 YSFQVAKGMEFLASRKCIHRDLAA--------RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  255 (343)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCcc--------CeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC
Confidence            567899999999999999999999        999999999999999999876543322222223345567999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ..++.++||||+|++++++++ .|..||....... ....+...     .... .....++++.+++.+||..||++||+
T Consensus       256 ~~~~~~~Di~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~cl~~~p~~Rps  328 (343)
T cd05103         256 RVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDEEFCRRLKEG-----TRMR-APDYTTPEMYQTMLDCWHGEPSQRPT  328 (343)
T ss_pred             CCCCchhhHHHHHHHHHHHHH-CCCCCCCCccccHHHHHHHhcc-----CCCC-CCCCCCHHHHHHHHHHccCChhhCcC
Confidence            888999999999999999996 3677887654322 22222211     1111 11235678999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++...|+++-
T Consensus       329 ~~eil~~l~~~~  340 (343)
T cd05103         329 FSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHHHHHHH
Confidence            999988888763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=2.5e-27  Score=181.42  Aligned_cols=157  Identities=17%  Similarity=0.188  Sum_probs=117.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......++..|+|||.+.+
T Consensus       123 ~~~ql~~aL~~LH~~gi~H~dlkp--------~Nil~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~  191 (353)
T cd07850         123 LLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILG  191 (353)
T ss_pred             HHHHHHHHHHHHHhCCeeeCCCCH--------HHEEECCCCCEEEccCccceeCCCCC---CCCCCcccccccCHHHHhC
Confidence            567889999999999999999999        99999999999999999987654322   1223346778999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC--------------------C-----------
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG--------------------E-----------  137 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~--------------------~-----------  137 (188)
                      ..++.++||||+|+++++++  .|..||...+.......+......+.                    .           
T Consensus       192 ~~~~~~~DvwslG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (353)
T cd07850         192 MGYKENVDIWSVGCIMGEMI--RGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPD  269 (353)
T ss_pred             CCCCCchhhHhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcc
Confidence            88999999999999999999  46678876654433333221111000                    0           


Q ss_pred             cc-----cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         138 FI-----YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       138 ~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ..     .......+.++.+++.+||..||++||+++|+  |+||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         270 VLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             cccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence            00     00011235678999999999999999999999  7888754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0196|consensus

Probab=99.95  E-value=1.2e-28  Score=195.29  Aligned_cols=160  Identities=27%  Similarity=0.487  Sum_probs=135.7

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc-ccccCCCCCCccccc
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWMA   82 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~   82 (188)
                      ++.-.|.++|+.+..||-+.+++||||-.        .|||++.+..+|++|||+++...+..+ .-.....+.+.+|.|
T Consensus       731 iQLVgMLrGIAsGMkYLsdm~YVHRDLAA--------RNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTA  802 (996)
T KOG0196|consen  731 IQLVGMLRGIASGMKYLSDMNYVHRDLAA--------RNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTA  802 (996)
T ss_pred             ehHHHHHHHHHHHhHHHhhcCchhhhhhh--------hheeeccceEEEeccccceeecccCCCccccccCCccceeecC
Confidence            45566788999999999999999999999        999999999999999999987754431 122233345688999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||.|...+++..+||||+|++++|+++ .|.-||.++...+.+..+....      ..+++..++..+..||..||++|-
T Consensus       803 PEAIa~RKFTsASDVWSyGIVmWEVmS-yGERPYWdmSNQdVIkaIe~gy------RLPpPmDCP~aL~qLMldCWqkdR  875 (996)
T KOG0196|consen  803 PEAIAYRKFTSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEQGY------RLPPPMDCPAALYQLMLDCWQKDR  875 (996)
T ss_pred             hhHhhhcccCchhhccccceEEEEecc-cCCCcccccchHHHHHHHHhcc------CCCCCCCCcHHHHHHHHHHHHHHh
Confidence            999999999999999999999999998 6899999999888888775422      233446789999999999999999


Q ss_pred             CCCCCHHHHHHHHHhc
Q psy4332         163 TERPSFTEIHLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el~~~l~~~  178 (188)
                      .+||+|.+++..|.++
T Consensus       876 ~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  876 NRRPKFAQIVSTLDKL  891 (996)
T ss_pred             hcCCCHHHHHHHHHHH
Confidence            9999999998888766

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.95  E-value=2.7e-27  Score=173.83  Aligned_cols=153  Identities=31%  Similarity=0.574  Sum_probs=120.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+.|++|+|+||        .||+++.++.++++|||++....... ........++..|++||.+.+
T Consensus       107 i~~~i~~al~~LH~~~i~H~dl~p--------~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~~pe~~~~  177 (260)
T cd05067         107 MAAQIAEGMAFIERKNYIHRDLRA--------ANILVSETLCCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINY  177 (260)
T ss_pred             HHHHHHHHHHHHhcCCeecccccH--------HhEEEcCCCCEEEccCcceeecCCCC-cccccCCcccccccCHHHhcc
Confidence            466888999999999999999999        99999999999999999986654221 111223334567999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|++++++++. |..||.+....+....+.....      .......+.++.+++.+||..+|++||++
T Consensus       178 ~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05067         178 GTFTIKSDVWSFGILLTEIVTY-GRIPYPGMTNPEVIQNLERGYR------MPRPDNCPEELYELMRLCWKEKPEERPTF  250 (260)
T ss_pred             CCcCcccchHHHHHHHHHHHhC-CCCCCCCCChHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            8889999999999999999952 7889988776665555432211      11123457899999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      +++..+|+.
T Consensus       251 ~~l~~~l~~  259 (260)
T cd05067         251 EYLRSVLED  259 (260)
T ss_pred             HHHHHHhhc
Confidence            999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.8e-28  Score=186.58  Aligned_cols=157  Identities=21%  Similarity=0.245  Sum_probs=121.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc------------------
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR------------------   69 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~------------------   69 (188)
                      ..+.+++.|+.|+|++||+|+||||        +||+++.++.++|+|||++..........                  
T Consensus       105 ~~~~qi~~aL~~lH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (364)
T cd05599         105 FYIAETILAIDSIHKLGYIHRDIKP--------DNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFIS  176 (364)
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCCH--------HHeEECCCCCEEEeecccceecccccccccccccccccccccccccc
Confidence            3567889999999999999999999        99999999999999999886543211000                  


Q ss_pred             ------------------ccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcc
Q psy4332          70 ------------------VHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHL  131 (188)
Q Consensus        70 ------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~  131 (188)
                                        ......||+.|+|||++.+..++.++||||+||++|+++  .|..||.+....+....+..+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~--~G~~Pf~~~~~~~~~~~i~~~  254 (364)
T cd05599         177 KPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML--VGYPPFCSDNPQETYRKIINW  254 (364)
T ss_pred             ccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh--cCCCCCCCCCHHHHHHHHHcC
Confidence                              011235889999999998888999999999999999999  678999988777666655543


Q ss_pred             cCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC---HHHH--HHHHHhc
Q psy4332         132 HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS---FTEI--HLFLQRK  178 (188)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~el--~~~l~~~  178 (188)
                      ..   ..........++++.+++.+|+. +|.+|++   +.++  |+||+..
T Consensus       255 ~~---~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         255 KE---TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CC---ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            21   11122223567899999999996 9999998   9998  7777543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.95  E-value=3.9e-27  Score=173.69  Aligned_cols=157  Identities=29%  Similarity=0.512  Sum_probs=121.5

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++.......... .......+..|++||.
T Consensus       110 ~~~~~~l~~al~~lH~~~i~H~dlkp--------~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  181 (268)
T cd05063         110 VGMLRGIAAGMKYLSDMNYVHRDLAA--------RNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA  181 (268)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccch--------hhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHH
Confidence            34567888999999999999999999        99999999999999999987654322111 1111223456999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++|+||+|+++|++++ .|..||......+....+....      ........+.++.+++.+||..+|++|
T Consensus       182 ~~~~~~~~~~Dv~slG~il~ell~-~g~~p~~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~~li~~c~~~~p~~R  254 (268)
T cd05063         182 IAYRKFTSASDVWSFGIVMWEVMS-FGERPYWDMSNHEVMKAINDGF------RLPAPMDCPSAVYQLMLQCWQQDRARR  254 (268)
T ss_pred             hhcCCcChHhHHHHHHHHHHHHHh-CCCCCCCcCCHHHHHHHHhcCC------CCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            988888999999999999999985 3678998777666665554321      111123457889999999999999999


Q ss_pred             CCHHHHHHHHHhc
Q psy4332         166 PSFTEIHLFLQRK  178 (188)
Q Consensus       166 ps~~el~~~l~~~  178 (188)
                      |++.++...|+++
T Consensus       255 p~~~~i~~~l~~~  267 (268)
T cd05063         255 PRFVDIVNLLDKL  267 (268)
T ss_pred             cCHHHHHHHHHhh
Confidence            9999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.3e-27  Score=172.96  Aligned_cols=151  Identities=28%  Similarity=0.528  Sum_probs=121.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||.+.......     .....+..|++||.+.
T Consensus       106 ~~~~qi~~~l~~lh~~~i~H~di~p--------~Nili~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~~  172 (256)
T cd05039         106 GFALDVCEGMEYLEEKNFVHRDLAA--------RNVLVSEDLVAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEALR  172 (256)
T ss_pred             HHHHHHHHHHHHHHhCCccchhccc--------ceEEEeCCCCEEEccccccccccccc-----ccCCCcccccCchhhc
Confidence            4567889999999999999999999        99999999999999999987763321     1223455799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|++++++++ .|..||......+....+....     . .......++++.+++.+||..+|++||+
T Consensus       173 ~~~~~~~~Di~slG~il~~l~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~  245 (256)
T cd05039         173 EKKFSTKSDVWSFGILLWEIYS-FGRVPYPRIPLKDVVPHVEKGY-----R-MEAPEGCPPEVYKVMKDCWELDPAKRPT  245 (256)
T ss_pred             CCcCCcHHHHHHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHhcCC-----C-CCCccCCCHHHHHHHHHHhccChhhCcC
Confidence            8888999999999999999995 3678988877666655544321     1 1112345789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      ++++...|+++
T Consensus       246 ~~~l~~~l~~~  256 (256)
T cd05039         246 FKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHhcC
Confidence            99999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=5.3e-28  Score=180.09  Aligned_cols=154  Identities=19%  Similarity=0.254  Sum_probs=117.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++.......   ......++..|+|||.+.+
T Consensus       107 ~~~qi~~~l~~lH~~~iiH~dikp--------~Nil~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05630         107 YAAEICCGLEDLHQERIVYRDLKP--------ENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             HHHHHHHHHHHHHhCCEEeCCCCH--------HHEEECCCCCEEEeeccceeecCCCc---cccCCCCCccccChHHHcC
Confidence            467889999999999999999999        99999999999999999986553322   1123457888999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC-
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS-  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-  167 (188)
                      ..++.++|+||+|+++|+++  .|..||....................   ......++.++.+++.+||+.||++||+ 
T Consensus       176 ~~~~~~~DiwslG~~l~~l~--~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~s~  250 (285)
T cd05630         176 ERYTFSPDWWALGCLLYEMI--AGQSPFQQRKKKIKREEVERLVKEVQ---EEYSEKFSPDARSLCKMLLCKDPKERLGC  250 (285)
T ss_pred             CCCCCccccHHHHHHHHHHH--hCCCCCCCCCccchHHHHHhhhhhhh---hhcCccCCHHHHHHHHHHhhcCHHHccCC
Confidence            88999999999999999999  56789986543211111111000000   1122456788999999999999999999 


Q ss_pred             ----HHHH--HHHHHhc
Q psy4332         168 ----FTEI--HLFLQRK  178 (188)
Q Consensus       168 ----~~el--~~~l~~~  178 (188)
                          ++|+  |+|+++.
T Consensus       251 ~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         251 QGGGAREVKEHPLFKQI  267 (285)
T ss_pred             CCCchHHHHcChhhhcc
Confidence                8898  7888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.95  E-value=1.2e-27  Score=175.19  Aligned_cols=147  Identities=16%  Similarity=0.224  Sum_probs=116.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++||+|+|+||        +||+++.++.++|+|||++.......  .......+++.|+|||.+.
T Consensus       106 ~~~~~l~~~l~~lH~~~i~H~di~p--------~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  175 (257)
T cd08223         106 EWFVQIAMALQYLHEKHILHRDLKT--------QNVFLTRTNIIKVGDLGIARVLENQC--DMASTLIGTPYYMSPELFS  175 (257)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCc--------hhEEEecCCcEEEecccceEEecccC--CccccccCCcCccChhHhc
Confidence            4567888999999999999999999        99999999999999999987653322  1223345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .+..||...+.......+.....      .......+.++.+++.+||+.+|++||+
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~--~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~  247 (257)
T cd08223         176 NKPYNYKSDVWALGCCVYEMA--TLKHAFNAKDMNSLVYRIIEGKL------PPMPKDYSPELGELIATMLSKRPEKRPS  247 (257)
T ss_pred             CCCCCchhhhHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHHhcCC------CCCccccCHHHHHHHHHHhccCcccCCC
Confidence            888899999999999999999  45678877665554444432211      1122456789999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.+++
T Consensus       248 ~~~~l  252 (257)
T cd08223         248 VKSIL  252 (257)
T ss_pred             HHHHh
Confidence            99983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=1.1e-28  Score=186.47  Aligned_cols=144  Identities=24%  Similarity=0.321  Sum_probs=116.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|++||.+.
T Consensus       102 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~  171 (318)
T cd05582         102 FYLAELALALDHLHSLGIIYRDLKP--------ENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVN  171 (318)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCH--------HHeEECCCCcEEEeeccCCcccCCCC--CceecccCChhhcCHHHHc
Confidence            3567899999999999999999999        99999999999999999987654331  1223456788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  +|..||......+....+.....      . .....+.++.+++.+||+.||++||+
T Consensus       172 ~~~~~~~~DiwslG~il~el~--tg~~p~~~~~~~~~~~~i~~~~~------~-~p~~~~~~~~~li~~~l~~~P~~R~~  242 (318)
T cd05582         172 RRGHTQSADWWSFGVLMFEML--TGSLPFQGKDRKETMTMILKAKL------G-MPQFLSPEAQSLLRALFKRNPANRLG  242 (318)
T ss_pred             CCCCCCccceeccceEeeeec--cCCCCCCCCCHHHHHHHHHcCCC------C-CCCCCCHHHHHHHHHHhhcCHhHcCC
Confidence            888899999999999999999  57889988877666665543211      1 12346789999999999999999999


Q ss_pred             HHH
Q psy4332         168 FTE  170 (188)
Q Consensus       168 ~~e  170 (188)
                      +.+
T Consensus       243 a~~  245 (318)
T cd05582         243 AGP  245 (318)
T ss_pred             CCC
Confidence            443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0611|consensus

Probab=99.95  E-value=3.3e-28  Score=181.40  Aligned_cols=149  Identities=23%  Similarity=0.329  Sum_probs=126.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      |+..++|..|+.|+|+++++|||+|.        +|||+++++.+||+|||++..+....   -....+|++-|++||.+
T Consensus       156 RhfFRQIvSAVhYCHknrVvHRDLKL--------ENILLD~N~NiKIADFGLSNly~~~k---fLqTFCGSPLYASPEIv  224 (668)
T KOG0611|consen  156 RHFFRQIVSAVHYCHKNRVVHRDLKL--------ENILLDQNNNIKIADFGLSNLYADKK---FLQTFCGSPLYASPEIV  224 (668)
T ss_pred             HHHHHHHHHHHHHHhhccceecccch--------hheeecCCCCeeeeccchhhhhcccc---HHHHhcCCcccCCcccc
Confidence            45567899999999999999999999        99999999999999999988775543   23467888999999999


Q ss_pred             hcCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ++..+ ...+|.||+|+++|.+.  .|.+||.+.+...+..++..+.+.+        +..+.+...+|++||..+|++|
T Consensus       225 NG~PY~GPEVDsWsLGvLLYtLV--yGtMPFDG~Dhk~lvrQIs~GaYrE--------P~~PSdA~gLIRwmLmVNP~RR  294 (668)
T KOG0611|consen  225 NGTPYKGPEVDSWSLGVLLYTLV--YGTMPFDGRDHKRLVRQISRGAYRE--------PETPSDASGLIRWMLMVNPERR  294 (668)
T ss_pred             CCCCCCCCccchhhHHHHHHHHh--hcccccCCchHHHHHHHhhcccccC--------CCCCchHHHHHHHHHhcCcccc
Confidence            98776 45799999999999999  7889999999888888887655433        3345688999999999999999


Q ss_pred             CCHHHH--HHHHH
Q psy4332         166 PSFTEI--HLFLQ  176 (188)
Q Consensus       166 ps~~el--~~~l~  176 (188)
                      .|++++  |.|+.
T Consensus       295 ATieDiAsHWWvN  307 (668)
T KOG0611|consen  295 ATIEDIASHWWVN  307 (668)
T ss_pred             hhHHHHhhhheee
Confidence            999999  66654

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=5.1e-28  Score=182.45  Aligned_cols=154  Identities=18%  Similarity=0.170  Sum_probs=107.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE----cCcceEEEccCCCCccCCCCccc-cccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV----GKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill----~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~   82 (188)
                      .++.+++.|+.|+|++||+|+||||        +||++    +.++.+||+|||+++........ .......++..|+|
T Consensus       112 ~i~~qi~~aL~~lH~~~ivH~Dlkp--------~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         112 SLLYQILDGIHYLHANWVLHRDLKP--------ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             HHHHHHHHHHHHHHhCCEEcCCCCH--------HHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence            4567899999999999999999999        99998    45678999999998766433211 11233456888999


Q ss_pred             hhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH---------HHHHHhhcccCCCC-----------C----
Q psy4332          83 WESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL---------EVLENISHLHADDG-----------E----  137 (188)
Q Consensus        83 Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~---------~~~~~~~~~~~~~~-----------~----  137 (188)
                      ||.+.+. .++.++||||+|+++|+++  +|..||......         .....+........           .    
T Consensus       184 PE~~~~~~~~~~~~DiwSlG~il~el~--tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T cd07867         184 PELLLGARHYTKAIDIWAIGCIFAELL--TSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTL  261 (317)
T ss_pred             cHHhcCCCccCcHHHHHhHHHHHHHHH--hCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhh
Confidence            9998764 4788999999999999999  456787643211         01111110000000           0    


Q ss_pred             ----------------cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         138 ----------------FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       138 ----------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                                      .........+..+.+++.+||+.||++|||++|+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~  311 (317)
T cd07867         262 QKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQA  311 (317)
T ss_pred             hhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHH
Confidence                            0000011234568899999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.2e-27  Score=175.80  Aligned_cols=151  Identities=18%  Similarity=0.254  Sum_probs=116.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccc-cCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV-HDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|+.||+|+|++|        .||+++.++.++|+|||++........... .....++..|+|||.+
T Consensus       108 ~~~~~l~~~l~~lH~~~i~H~dl~p--------~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (263)
T cd06625         108 KYTRQILEGVEYLHSNMIVHRDIKG--------ANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI  179 (263)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCccee
Confidence            4567889999999999999999999        999999999999999999865533211111 1234466789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+...+.++||||+|+++|+++  .|..||................    .. .......+..+.+++.+||..+|++||
T Consensus       180 ~~~~~~~~~Di~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (263)
T cd06625         180 SGEGYGRKADVWSVGCTVVEML--TEKPPWAEFEAMAAIFKIATQP----TN-PQLPSHVSPDARNFLRRTFVENAKKRP  252 (263)
T ss_pred             ccCCCCchhhhHHHHHHHHHHH--hCCCCccccchHHHHHHHhccC----CC-CCCCccCCHHHHHHHHHHhhcCcccCC
Confidence            9888899999999999999999  5678988765544443332211    11 112235678999999999999999999


Q ss_pred             CHHHHHH
Q psy4332         167 SFTEIHL  173 (188)
Q Consensus       167 s~~el~~  173 (188)
                      ++.+++.
T Consensus       253 t~~~ll~  259 (263)
T cd06625         253 SAEELLR  259 (263)
T ss_pred             CHHHHhh
Confidence            9999943

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=1.4e-27  Score=177.87  Aligned_cols=158  Identities=21%  Similarity=0.367  Sum_probs=117.1

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+ .+++|+|+||        +||+++.++.++|+|||++.......   ......++..|++||.+
T Consensus       111 ~i~~~i~~~l~~lh~~~~i~H~dlkp--------~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~  179 (288)
T cd06616         111 KIAVATVKALNYLKEELKIIHRDVKP--------SNILLDRNGNIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERI  179 (288)
T ss_pred             HHHHHHHHHHHHHhhcCCeeccCCCH--------HHEEEccCCcEEEeecchhHHhccCC---ccccccCccCccCHHHh
Confidence            356678889999997 5999999999        99999999999999999986654322   12334567789999999


Q ss_pred             hcC---CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC-CCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          87 RLR---KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD-GEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        87 ~~~---~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .+.   .++.++||||+|+++++++  .|..||.....  ....+....... ..........++.++.+++.+||..+|
T Consensus       180 ~~~~~~~~~~~~Di~slG~il~el~--~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  255 (288)
T cd06616         180 DPSARDGYDVRSDVWSLGITLYEVA--TGKFPYPKWNS--VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDE  255 (288)
T ss_pred             ccccccCCcchhhhhHHHHHHHHHH--hCCCCchhcch--HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCCh
Confidence            765   5788999999999999999  56788876542  222221111111 111111113467899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccC
Q psy4332         163 TERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~  180 (188)
                      ++||+++++  ++||++...
T Consensus       256 ~~Rpt~~~i~~~~~~~~~~~  275 (288)
T cd06616         256 SKRPKYKELLEHPFIKDYEE  275 (288)
T ss_pred             hhCcCHHHHhcChhhhchhh
Confidence            999999999  788876543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=1.8e-27  Score=176.88  Aligned_cols=162  Identities=25%  Similarity=0.399  Sum_probs=117.5

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++......... .......++..|++||.
T Consensus       110 ~~i~~~l~~~l~~lH~~~i~H~dlkp--------~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  181 (283)
T cd05080         110 LLFAQQICEGMAYLHSQHYIHRDLAA--------RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVEC  181 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccCh--------heEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhH
Confidence            34567899999999999999999999        9999999999999999998766433221 11222334567999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhccc--CC--------CCCcccCCCCCChHHHHHHHH
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLH--AD--------DGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~li~  155 (188)
                      +.+..++.++||||+|+++++++|  |..||...... .........  ..        ............+.++.+++.
T Consensus       182 ~~~~~~~~~~Di~slG~~l~el~t--g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  258 (283)
T cd05080         182 LKENKFSYASDVWSFGVTLYELLT--HCDSKQSPPKK-FEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMK  258 (283)
T ss_pred             hcccCCCcccccHHHHHHHHHHHh--CCCCCCCCcch-hhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHH
Confidence            988888999999999999999995  55676543211 000000000  00        000001112446789999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhcc
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                      +||..+|++||+++++...|+++.
T Consensus       259 ~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         259 NCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             HHhccChhhCCCHHHHHHHHHHhh
Confidence            999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0032|consensus

Probab=99.95  E-value=1.4e-27  Score=182.53  Aligned_cols=157  Identities=22%  Similarity=0.280  Sum_probs=133.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc----ceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK----FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      ...++++.++.|+|+.||+|||+||        +|+|+...    +.+|++|||++......   .......||+.|+||
T Consensus       139 ~~~~~il~av~~lH~~gvvHrDlKp--------EN~L~~~~~~~~~~ik~~DFGla~~~~~~---~~~~~~~Gtp~y~AP  207 (382)
T KOG0032|consen  139 GIIRQILEAVKYLHSLGVVHRDLKP--------ENLLLASKDEGSGRIKLIDFGLAKFIKPG---ERLHTIVGTPEYVAP  207 (382)
T ss_pred             HHHHHHHHHHHHHHhCCceeccCCH--------HHeeeccccCCCCcEEEeeCCCceEccCC---ceEeeecCCccccCc
Confidence            4567888999999999999999999        99888644    47999999999887652   345677899999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |++.+..++..+||||+|++.|.|+  +|..||.+.........+.....   .....+....+..+.+++.+|+..||.
T Consensus       208 Evl~~~~y~~~~DiWS~Gvi~yiLL--~G~~PF~~~~~~~~~~~i~~~~~---~f~~~~w~~is~~akd~i~~ll~~dp~  282 (382)
T KOG0032|consen  208 EVLGGRPYGDEVDVWSIGVILYILL--SGVPPFWGETEFEIFLAILRGDF---DFTSEPWDDISESAKDFIRKLLEFDPR  282 (382)
T ss_pred             hhhcCCCCCcccchhHHHHHHHHHh--hCCCCCcCCChhHHHHHHHcCCC---CCCCCCccccCHHHHHHHHHhcccCcc
Confidence            9999889999999999999999999  88999999988887777765443   333445566789999999999999999


Q ss_pred             CCCCHHHH--HHHHHhccC
Q psy4332         164 ERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~~  180 (188)
                      +|+++.++  |+|++....
T Consensus       283 ~R~ta~~~L~HpWi~~~~~  301 (382)
T KOG0032|consen  283 KRLTAAQALQHPWIKSIGE  301 (382)
T ss_pred             cCCCHHHHhcCccccCCcc
Confidence            99999999  889887633

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=5e-28  Score=179.64  Aligned_cols=155  Identities=24%  Similarity=0.404  Sum_probs=120.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        +||+++.++.++|+|||++......    ......++..|+|||.+.
T Consensus        99 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nill~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~  166 (279)
T cd06619          99 RIAVAVVKGLTYLWSLKILHRDVKP--------SNMLVNTRGQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERIS  166 (279)
T ss_pred             HHHHHHHHHHHHHHHCCEeeCCCCH--------HHEEECCCCCEEEeeCCcceecccc----cccCCCCChhhcCceeec
Confidence            4677899999999999999999999        9999999999999999998765432    223445778899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-------HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-------LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      +..++.++|+||+|+++|+++  +|..||.....       ......+...     .....+....+.++.+++.+||..
T Consensus       167 ~~~~~~~~DvwslG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~  239 (279)
T cd06619         167 GEQYGIHSDVWSLGISFMELA--LGRFPYPQIQKNQGSLMPLQLLQCIVDE-----DPPVLPVGQFSEKFVHFITQCMRK  239 (279)
T ss_pred             CCCCCCcchHHHHHHHHHHHH--hCCCCchhhcccccccchHHHHHHHhcc-----CCCCCCCCcCCHHHHHHHHHHhhC
Confidence            888999999999999999999  56788865321       1122222111     111222344677899999999999


Q ss_pred             CCCCCCCHHHH--HHHHHhccCC
Q psy4332         161 SPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      +|++||+++++  ++||++.+.+
T Consensus       240 ~P~~Rp~~~eil~~~~~~~~~~~  262 (279)
T cd06619         240 QPKERPAPENLMDHPFIVQYNDG  262 (279)
T ss_pred             ChhhCCCHHHHhcCcccccccCc
Confidence            99999999999  7888776544

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=3.2e-27  Score=179.38  Aligned_cols=167  Identities=23%  Similarity=0.217  Sum_probs=122.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++..........  ......++..|++||.
T Consensus       109 ~~~~qi~~aL~~LH~~givH~dlkp--------~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~  180 (332)
T cd07857         109 SFIYQILCGLKYIHSANVLHRDLKP--------GNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI  180 (332)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHH
Confidence            4567899999999999999999999        99999999999999999987654322111  1123457888999998


Q ss_pred             hhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC------------------------CCccc
Q psy4332          86 VRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD------------------------GEFIY  140 (188)
Q Consensus        86 ~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~~~  140 (188)
                      +.+ ..++.++|+||+|+++++++  .|..||...........+.......                        .....
T Consensus       181 ~~~~~~~~~~~Di~slGv~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (332)
T cd07857         181 MLSFQSYTKAIDVWSVGCILAELL--GRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFE  258 (332)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHH--hCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchH
Confidence            865 35788999999999999999  5678887665443333222111100                        00001


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCC
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVP  184 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~  184 (188)
                      ...+..+..+.+++.+||..||++||++.++  ++|+++.++....
T Consensus       259 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~  304 (332)
T cd07857         259 SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDE  304 (332)
T ss_pred             hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCcccc
Confidence            1123346789999999999999999999999  8999887665433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0194|consensus

Probab=99.95  E-value=2.9e-28  Score=188.16  Aligned_cols=164  Identities=31%  Similarity=0.526  Sum_probs=133.6

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccC-CCCCCccccc
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHD-NTSLPIRWMA   82 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~-~~~~~~~~~~   82 (188)
                      .++...+.+.++|+.|||+++++||||-.        +|+|++.++.+||+|||+++.-.   .+.... ....+..|+|
T Consensus       262 ~ek~~~~~~AA~Gl~YLh~k~~IHRDIAA--------RNcL~~~~~~vKISDFGLs~~~~---~~~~~~~~~klPirWLA  330 (474)
T KOG0194|consen  262 LEKLRFCYDAARGLEYLHSKNCIHRDIAA--------RNCLYSKKGVVKISDFGLSRAGS---QYVMKKFLKKLPIRWLA  330 (474)
T ss_pred             HHHHHHHHHHHhHHHHHHHCCCcchhHhH--------HHheecCCCeEEeCccccccCCc---ceeeccccccCcceecC
Confidence            34556778889999999999999999999        99999999999999999976543   223333 3456778999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||.+....++.++||||||+++||+++ .|..||.+....++..++....    .+... ....+.++..++.+||..+|
T Consensus       331 PEtl~~~~~s~kTDV~sfGV~~~Eif~-~g~~Py~g~~~~~v~~kI~~~~----~r~~~-~~~~p~~~~~~~~~c~~~~p  404 (474)
T KOG0194|consen  331 PETLNTGIFSFKTDVWSFGVLLWEIFE-NGAEPYPGMKNYEVKAKIVKNG----YRMPI-PSKTPKELAKVMKQCWKKDP  404 (474)
T ss_pred             hhhhccCccccccchhheeeeEEeeec-cCCCCCCCCCHHHHHHHHHhcC----ccCCC-CCCCHHHHHHHHHHhccCCh
Confidence            999999999999999999999999997 3567999999988888884321    12122 23667889999999999999


Q ss_pred             CCCCCHHHHHHHHHhccCCCCC
Q psy4332         163 TERPSFTEIHLFLQRKNLGYVP  184 (188)
Q Consensus       163 ~~Rps~~el~~~l~~~~~~~~~  184 (188)
                      +.||++.++.++++.+.....+
T Consensus       405 ~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  405 EDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             hhccCHHHHHHHHHHHHhcccc
Confidence            9999999999999887665443

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.95  E-value=4.7e-27  Score=173.50  Aligned_cols=157  Identities=31%  Similarity=0.572  Sum_probs=123.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++......... ......++..|+|||.+.
T Consensus       111 ~~~~~l~~~l~~lH~~~~~H~dl~p--------~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~  181 (270)
T cd05056         111 LYSYQLSTALAYLESKRFVHRDIAA--------RNVLVSSPDCVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESIN  181 (270)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccCh--------heEEEecCCCeEEccCceeeecccccce-ecCCCCccccccChhhhc
Confidence            3567899999999999999999999        9999999999999999998765433211 112223445799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ...++.++||||+|++++++++ .|..||.+....+....+....     . .......+.++.+++.+|+..+|++||+
T Consensus       182 ~~~~~~~~Di~slG~il~el~~-~g~~pf~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt  254 (270)
T cd05056         182 FRRFTSASDVWMFGVCMWEILM-LGVKPFQGVKNNDVIGRIENGE-----R-LPMPPNCPPTLYSLMTKCWAYDPSKRPR  254 (270)
T ss_pred             cCCCCchhhhHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHcCC-----c-CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            7888999999999999999885 4778998877655554443221     1 1122456789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +.++...|+++..
T Consensus       255 ~~~~~~~l~~~~~  267 (270)
T cd05056         255 FTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999988887644

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=4.6e-27  Score=172.60  Aligned_cols=155  Identities=34%  Similarity=0.603  Sum_probs=121.7

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++|++|+|+||        +||+++.++.++++|||++....... .........+..|++||.+
T Consensus       106 ~~~~~~i~~al~~lh~~~i~h~di~p--------~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~  176 (261)
T cd05034         106 VDMAAQIAEGMAYLESRNYIHRDLAA--------RNILVGENLVCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAA  176 (261)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCcch--------heEEEcCCCCEEECccccceeccchh-hhhhhccCCCccccCHHHh
Confidence            34667888999999999999999999        99999999999999999987664321 1111222344679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+...+.++|+||+|+++++++| .|..||.+.........+.....      .......+.++.+++.+||..+|++||
T Consensus       177 ~~~~~~~~~Di~slG~il~~l~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp  249 (261)
T cd05034         177 NYGRFTIKSDVWSFGILLTEIVT-YGRVPYPGMTNREVLEQVERGYR------MPRPPNCPEELYDLMLQCWDKDPEERP  249 (261)
T ss_pred             ccCCcCchhHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcccCcccCC
Confidence            88888999999999999999996 26789988776665555543211      111233477999999999999999999


Q ss_pred             CHHHHHHHHHh
Q psy4332         167 SFTEIHLFLQR  177 (188)
Q Consensus       167 s~~el~~~l~~  177 (188)
                      +++++...|++
T Consensus       250 ~~~~l~~~l~~  260 (261)
T cd05034         250 TFEYLQSFLED  260 (261)
T ss_pred             CHHHHHHHHhc
Confidence            99999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.95  E-value=3.4e-27  Score=183.08  Aligned_cols=156  Identities=29%  Similarity=0.483  Sum_probs=120.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++++|+|+||        .||+++.++.+||+|||+++...............++..|++||.+.+
T Consensus       244 ~~~qi~~aL~~LH~~~ivHrdlkp--------~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  315 (401)
T cd05107         244 FSYQVANGMEFLASKNCVHRDLAA--------RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN  315 (401)
T ss_pred             HHHHHHHHHHHHhcCCcCcccCCc--------ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC
Confidence            456899999999999999999999        999999999999999999876533222122233445678999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|++++|+++. +..||......+.........    ... ......+.++.+++.+||..+|++||++
T Consensus       316 ~~~~~~~DvwslGvil~e~l~~-g~~P~~~~~~~~~~~~~~~~~----~~~-~~p~~~~~~l~~li~~cl~~~P~~RPs~  389 (401)
T cd05107         316 NLYTTLSDVWSFGILLWEIFTL-GGTPYPELPMNEQFYNAIKRG----YRM-AKPAHASDEIYEIMQKCWEEKFEIRPDF  389 (401)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHc-CCCCCCCCCchHHHHHHHHcC----CCC-CCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence            8889999999999999999962 567887765444333322211    111 1123457899999999999999999999


Q ss_pred             HHHHHHHHhc
Q psy4332         169 TEIHLFLQRK  178 (188)
Q Consensus       169 ~el~~~l~~~  178 (188)
                      ++++..|+++
T Consensus       390 ~ell~~L~~~  399 (401)
T cd05107         390 SQLVHLVGDL  399 (401)
T ss_pred             HHHHHHHHHH
Confidence            9999888764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0690|consensus

Probab=99.95  E-value=8.6e-28  Score=174.75  Aligned_cols=154  Identities=19%  Similarity=0.243  Sum_probs=129.5

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .|....+|+.|+-|||+++|++||+|.        +|.+++.+|++||+|||+++.-...+  ......+||+.|+|||+
T Consensus       270 tRFYGaEIvsAL~YLHs~~ivYRDlKL--------ENLlLDkDGHIKitDFGLCKE~I~~g--~t~kTFCGTPEYLAPEV  339 (516)
T KOG0690|consen  270 TRFYGAEIVSALGYLHSRNIVYRDLKL--------ENLLLDKDGHIKITDFGLCKEEIKYG--DTTKTFCGTPEYLAPEV  339 (516)
T ss_pred             hhhhhHHHHHHhhhhhhCCeeeeechh--------hhheeccCCceEeeecccchhccccc--ceeccccCChhhcCchh
Confidence            345567899999999999999999999        99999999999999999988654443  34567889999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +....+...+|.|.+|+++|||+  +|..||...+...+.+-+.-..       ...+...+++...++..+|.+||.+|
T Consensus       340 leDnDYgraVDWWG~GVVMYEMm--CGRLPFyn~dh~kLFeLIl~ed-------~kFPr~ls~eAktLLsGLL~kdP~kR  410 (516)
T KOG0690|consen  340 LEDNDYGRAVDWWGVGVVMYEMM--CGRLPFYNKDHEKLFELILMED-------LKFPRTLSPEAKTLLSGLLKKDPKKR  410 (516)
T ss_pred             hccccccceeehhhhhHHHHHHH--hccCcccccchhHHHHHHHhhh-------ccCCccCCHHHHHHHHHHhhcChHhh
Confidence            99999999999999999999999  8999999988777776654321       12235677899999999999999999


Q ss_pred             CC-----HHHH--HHHHHhc
Q psy4332         166 PS-----FTEI--HLFLQRK  178 (188)
Q Consensus       166 ps-----~~el--~~~l~~~  178 (188)
                      ..     +.|+  |++|..+
T Consensus       411 LGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  411 LGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             cCCCchhHHHHHhhhhhccC
Confidence            73     6677  7777755

>KOG0667|consensus

Probab=99.95  E-value=4e-28  Score=189.17  Aligned_cols=158  Identities=23%  Similarity=0.291  Sum_probs=121.3

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc--eEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF--EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .|.++.+|+.+|..||+.||||+||||        +||||.+.+  .+||+|||+|+......    . .-..+..|.||
T Consensus       291 ir~~~~Qil~~L~~L~~l~IIHcDLKP--------ENILL~~~~r~~vKVIDFGSSc~~~q~v----y-tYiQSRfYRAP  357 (586)
T KOG0667|consen  291 VRKFAQQILTALLFLHELGIIHCDLKP--------ENILLKDPKRSRIKVIDFGSSCFESQRV----Y-TYIQSRFYRAP  357 (586)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCCh--------hheeeccCCcCceeEEecccccccCCcc----e-eeeeccccccc
Confidence            456789999999999999999999999        888876543  58999999998775432    2 44556679999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc-------------------------
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF-------------------------  138 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------  138 (188)
                      |++.+..+..+.|||||||+++||+  .|.+-|.+.+..++...+.+....++..                         
T Consensus       358 EVILGlpY~~~IDmWSLGCIlAEL~--tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~  435 (586)
T KOG0667|consen  358 EVILGLPYDTAIDMWSLGCILAELF--TGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET  435 (586)
T ss_pred             hhhccCCCCCccceeehhhhHHhHh--cCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence            9999999999999999999999999  5677788877777666654322211000                         


Q ss_pred             -------------------cc--CC-C--------C-CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         139 -------------------IY--LP-T--------P-QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       139 -------------------~~--~~-~--------~-~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                                         ..  .+ .        . .....+.+|+.+||+.||.+|+|..++  |+||...
T Consensus       436 ~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  436 SAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             cccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                               00  00 0        0 113458999999999999999999998  8999854

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=5.5e-28  Score=177.17  Aligned_cols=157  Identities=24%  Similarity=0.387  Sum_probs=115.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.++|++||+|+||||        +||+++.++.++|+|||.+.......  .......++..|+|||..
T Consensus       101 ~~~~~qi~~~L~~Lh~~~i~H~dikp--------~NIl~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~  170 (260)
T PF00069_consen  101 LKIAYQILEALAYLHSKGIVHRDIKP--------ENILLDENGEVKLIDFGSSVKLSENN--ENFNPFVGTPEYMAPEVL  170 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEESSBSG--------GGEEESTTSEEEESSGTTTEESTSTT--SEBSSSSSSGGGSCHHHH
T ss_pred             cccccccccccccccccccccccccc--------cccccccccccccccccccccccccc--cccccccccccccccccc
Confidence            34567889999999999999999999        99999999999999999986541111  233456678889999999


Q ss_pred             h-cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 R-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~-~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      . +...+.++|+||+|++++++++  +..||...........+....................++.+++.+||..||++|
T Consensus       171 ~~~~~~~~~~Di~slG~il~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  248 (260)
T PF00069_consen  171 QQGKKYTRKSDIWSLGIILYELLT--GKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQR  248 (260)
T ss_dssp             TTTSSBSTHHHHHHHHHHHHHHHH--SSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGS
T ss_pred             cccccccccccccccccccccccc--cccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHC
Confidence            8 7788999999999999999994  668888773222222221111100111111112224799999999999999999


Q ss_pred             CCHHHH--HHHH
Q psy4332         166 PSFTEI--HLFL  175 (188)
Q Consensus       166 ps~~el--~~~l  175 (188)
                      |++.++  |+||
T Consensus       249 ~~~~~l~~~~~~  260 (260)
T PF00069_consen  249 PSAEELLKHPWF  260 (260)
T ss_dssp             TTHHHHHTSGGG
T ss_pred             cCHHHHhcCCCC
Confidence            999999  4543

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=1.4e-27  Score=181.62  Aligned_cols=168  Identities=20%  Similarity=0.201  Sum_probs=120.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~~   87 (188)
                      ++.+++.++.++|++||+|+||||        .||+++.++.++|+|||++.......... ......++..|+|||.+.
T Consensus       111 i~~ql~~aL~~LH~~~ivH~dlkp--------~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (336)
T cd07849         111 FLYQILRGLKYIHSANVLHRDLKP--------SNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML  182 (336)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCH--------HHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhh
Confidence            456888999999999999999999        99999999999999999987654322111 112345678899999876


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC--------------------CCcccC----C
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD--------------------GEFIYL----P  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~----~  142 (188)
                      + ..++.++||||+|++++++++  |..||.+.........+.......                    ......    .
T Consensus       183 ~~~~~~~~~DvwslGvil~el~~--G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (336)
T cd07849         183 NSKGYTKAIDIWSVGCILAEMLS--NRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKL  260 (336)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHH
Confidence            4 457889999999999999994  567887654333222221110000                    000000    1


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPM  186 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~~  186 (188)
                      .+..+.++.+++.+||+.+|++||++.++  |+||++.......|.
T Consensus       261 ~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~  306 (336)
T cd07849         261 FPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPV  306 (336)
T ss_pred             hcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCccc
Confidence            13356789999999999999999999999  889998766544444

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG1187|consensus

Probab=99.95  E-value=5.4e-28  Score=184.25  Aligned_cols=164  Identities=23%  Similarity=0.257  Sum_probs=115.0

Q ss_pred             cCCccccchhhhhhhhcccc---cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCC-CCCccc
Q psy4332           5 RHRPQASNLAVVPLLRNKNG---VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT-SLPIRW   80 (188)
Q Consensus         5 ~~~~~~~~~~~~~~~lh~~~---i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~   80 (188)
                      ++.++|.++|.|+.|||...   |+|||||+        .|||+|.++.+||+|||+++...... . ..... .||.+|
T Consensus       175 ~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs--------sNILLD~~~~aKlsDFGLa~~~~~~~-~-~~~~~~~gt~gY  244 (361)
T KOG1187|consen  175 TRLKIALGAARGLAYLHEGCPPPIIHRDIKS--------SNILLDEDFNAKLSDFGLAKLGPEGD-T-SVSTTVMGTFGY  244 (361)
T ss_pred             HHHHHHHHHHHHHHHHccCCCCCEecCCCCH--------HHeeECCCCCEEccCccCcccCCccc-c-ceeeecCCCCcc
Confidence            35578999999999999744   99999999        99999999999999999996554311 1 11112 789999


Q ss_pred             cchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC------CHHHHHHH-hhcccCC---CCCcccCCCC--CChH
Q psy4332          81 MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL------TDLEVLEN-ISHLHAD---DGEFIYLPTP--QTTK  148 (188)
Q Consensus        81 ~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~------~~~~~~~~-~~~~~~~---~~~~~~~~~~--~~~~  148 (188)
                      ++||+...+..+.|+||||||++++|++||.  .+....      ...++... +......   .+........  ....
T Consensus       245 ~~PEy~~~g~lt~KsDVySFGVvllElitgr--~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~  322 (361)
T KOG1187|consen  245 LAPEYASTGKLTEKSDVYSFGVVLLELITGR--KAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVK  322 (361)
T ss_pred             CChhhhccCCcCcccccccchHHHHHHHhCC--cccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHH
Confidence            9999999889999999999999999999654  333321      11121111 1111000   0000000111  2234


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         149 DILDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       149 ~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .+..++.+|++.+|+.||++.||+..|+.+..
T Consensus       323 ~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  323 KLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            47788999999999999999999888866543

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.95  E-value=4.6e-27  Score=172.09  Aligned_cols=149  Identities=32%  Similarity=0.531  Sum_probs=119.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++......     ......+..|++||.+.+
T Consensus       105 ~~~qi~~al~~lH~~~~~H~dl~p--------~nili~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~~~~  171 (254)
T cd05083         105 FSLDVAEGMEYLESKKLVHRDLAA--------RNILVSEDGVAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEALKH  171 (254)
T ss_pred             HHHHHHHHHHHHHhCCeeccccCc--------ceEEEcCCCcEEECCCccceecccc-----CCCCCCCceecCHHHhcc
Confidence            466889999999999999999999        9999999999999999987654321     112233457999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|++++++++ .|..||......+....+....     . ..+....+..+.+++.+||..+|++||++
T Consensus       172 ~~~~~~~Dv~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  244 (254)
T cd05083         172 KKFSSKSDVWSYGVLLWEVFS-YGRAPYPKMSLKEVKECVEKGY-----R-MEPPEGCPADVYVLMTSCWETEPKKRPSF  244 (254)
T ss_pred             CCcCchhhHHHHHHHHHHHHh-CCCCCCccCCHHHHHHHHhCCC-----C-CCCCCcCCHHHHHHHHHHcCCChhhCcCH
Confidence            889999999999999999995 3678998877666555443211     1 11224567899999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      +++...|++
T Consensus       245 ~~l~~~l~~  253 (254)
T cd05083         245 HKLREKLEK  253 (254)
T ss_pred             HHHHHHHcc
Confidence            999888764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=6.8e-28  Score=185.54  Aligned_cols=157  Identities=19%  Similarity=0.273  Sum_probs=121.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++........ .......||+.|+|||.+.
T Consensus       146 ~~~~qil~aL~~LH~~~IvHrDLKp--------~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~  216 (370)
T cd05621         146 FYTAEVVLALDAIHSMGLIHRDVKP--------DNMLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLK  216 (370)
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCH--------HHEEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCHHHHh
Confidence            3567899999999999999999999        999999999999999999876643321 1223456889999999997


Q ss_pred             cCC----CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 LRK----FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~~~----~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      +..    ++.++|+||+|+++|+++  +|..||.+.........+.....   ..........+..+.+++.+|+..++.
T Consensus       217 ~~~~~~~~~~~~DiwSlG~ilyell--~G~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~s~~~~~li~~~L~~~~~  291 (370)
T cd05621         217 SQGGDGYYGRECDWWSVGVFLFEML--VGDTPFYADSLVGTYSKIMDHKN---SLNFPEDVEISKHAKNLICAFLTDREV  291 (370)
T ss_pred             ccCCCCCCCcccCEEeehHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCc---ccCCCCcccCCHHHHHHHHHHccCchh
Confidence            543    678999999999999999  67899988877666666653221   111122234678899999999975554


Q ss_pred             C--CCCHHHH--HHHHHhc
Q psy4332         164 E--RPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~--Rps~~el--~~~l~~~  178 (188)
                      +  |+++.|+  |+|++..
T Consensus       292 r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         292 RLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             ccCCCCHHHHhcCcccCCC
Confidence            3  8899999  8888753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.95  E-value=3.5e-27  Score=173.80  Aligned_cols=154  Identities=21%  Similarity=0.311  Sum_probs=118.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++++|||++........  ......++..|++||.+.
T Consensus       110 ~~~~~i~~~l~~LH~~~i~H~dl~p--------~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~  179 (267)
T cd08229         110 KYFVQLCSALEHMHSRRVMHRDIKP--------ANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEEcCCCCEEECcchhhhccccCCc--ccccccCCcCccCHHHhc
Confidence            3466888999999999999999999        999999999999999998766543221  112345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH--HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD--LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..++.++|+||+|+++++++  .|..||.+...  ......+...     .....+....+.++.+++.+||..+|++|
T Consensus       180 ~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~R  252 (267)
T cd08229         180 ENGYNFKSDIWSLGCLLYEMA--ALQSPFYGDKMNLYSLCKKIEQC-----DYPPLPSDHYSEELRQLVNMCINPDPEKR  252 (267)
T ss_pred             CCCccchhhHHHHHHHHHHHH--hCCCCcccccchHHHHhhhhhcC-----CCCCCCcccccHHHHHHHHHhcCCCcccC
Confidence            888899999999999999999  56678865532  2222222211     11122234567899999999999999999


Q ss_pred             CCHHHHHHHHHhc
Q psy4332         166 PSFTEIHLFLQRK  178 (188)
Q Consensus       166 ps~~el~~~l~~~  178 (188)
                      ||+.++.+.++++
T Consensus       253 pt~~~i~~~~~~~  265 (267)
T cd08229         253 PDITYVYDVAKRM  265 (267)
T ss_pred             CCHHHHHHHHhhh
Confidence            9999998888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=8.5e-27  Score=170.19  Aligned_cols=153  Identities=29%  Similarity=0.549  Sum_probs=118.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .+..+++.++.|+|++|++|+|+||        +||+++.++.++++|||++....... ........++..|++||++.
T Consensus        97 ~~~~~i~~~l~~lH~~~~~H~dl~p--------~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  167 (250)
T cd05085          97 KFALDAAAGMAYLESKNCIHRDLAA--------RNCLVGENNVLKISDFGMSRQEDDGI-YSSSGLKQIPIKWTAPEALN  167 (250)
T ss_pred             HHHHHHHHHHHHHHhCCeeecccCh--------heEEEcCCCeEEECCCccceeccccc-cccCCCCCCcccccCHHHhc
Confidence            3456788899999999999999999        99999999999999999986543221 11112233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|++++ .|..||.+.........+....     ... .....+.++.+++.+||..+|++||+
T Consensus       168 ~~~~~~~~Di~slG~ll~~~~~-~g~~p~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~  240 (250)
T cd05085         168 YGRYSSESDVWSYGILLWETFS-LGVCPYPGMTNQQAREQVEKGY-----RMS-CPQKCPDDVYKVMQRCWDYKPENRPK  240 (250)
T ss_pred             cCCCCchhHHHHHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHcCC-----CCC-CCCCCCHHHHHHHHHHcccCcccCCC
Confidence            8888999999999999999995 2678998876655554443211     111 12346789999999999999999999


Q ss_pred             HHHHHHHHH
Q psy4332         168 FTEIHLFLQ  176 (188)
Q Consensus       168 ~~el~~~l~  176 (188)
                      +.++.+.|.
T Consensus       241 ~~~l~~~l~  249 (250)
T cd05085         241 FSELQKELA  249 (250)
T ss_pred             HHHHHHHhc
Confidence            999987764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=1e-27  Score=184.66  Aligned_cols=156  Identities=20%  Similarity=0.295  Sum_probs=119.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++........ .......||+.|+|||++.
T Consensus       146 ~~~~qi~~aL~~LH~~~ivHrDLkp--------~NIll~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~  216 (371)
T cd05622         146 FYTAEVVLALDAIHSMGFIHRDVKP--------DNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLK  216 (371)
T ss_pred             HHHHHHHHHHHHHHHCCEEeCCCCH--------HHEEECCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHh
Confidence            3467889999999999999999999        999999999999999999876643321 1223456889999999997


Q ss_pred             cCC----CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 LRK----FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~~~----~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      +..    ++.++||||+||++|+|+  .|..||.+.........+.....   ..........+..+.+++.+|+..++.
T Consensus       217 ~~~~~~~~~~~~DiwSlGvilyell--~G~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~~~~  291 (371)
T cd05622         217 SQGGDGYYGRECDWWSVGVFLYEML--VGDTPFYADSLVGTYSKIMNHKN---SLTFPDDNDISKEAKNLICAFLTDREV  291 (371)
T ss_pred             ccCCCccCCCccceeehhHHHHHHH--hCCCCCCCCCHHHHHHHHHcCCC---cccCCCcCCCCHHHHHHHHHHcCChhh
Confidence            543    678999999999999999  57899998877666666653221   111222345788999999999984443


Q ss_pred             C--CCCHHHH--HHHHHh
Q psy4332         164 E--RPSFTEI--HLFLQR  177 (188)
Q Consensus       164 ~--Rps~~el--~~~l~~  177 (188)
                      +  |++++++  |+|+++
T Consensus       292 r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         292 RLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             hcCCCCHHHHhcCcccCC
Confidence            3  7799998  667764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.95  E-value=5.6e-28  Score=186.80  Aligned_cols=156  Identities=23%  Similarity=0.317  Sum_probs=118.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc---------------------
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY---------------------   67 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~---------------------   67 (188)
                      .+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++........                     
T Consensus       106 ~~~qi~~al~~lH~~~ivHrDlKp--------~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (382)
T cd05625         106 YIAELTCAVESVHKMGFIHRDIKP--------DNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW  177 (382)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccc
Confidence            356788999999999999999999        999999999999999998753210000                     


Q ss_pred             ------------------------ccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy4332          68 ------------------------YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE  123 (188)
Q Consensus        68 ------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~  123 (188)
                                              ........||+.|+|||++.+..++.++||||+||++|+|+  +|..||.+..+.+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ell--tG~~Pf~~~~~~~  255 (382)
T cd05625         178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML--VGQPPFLAQTPLE  255 (382)
T ss_pred             cccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHH--hCCCCCCCCCHHH
Confidence                                    00011235788999999998888999999999999999999  5789999887666


Q ss_pred             HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC---HHHH--HHHHHhc
Q psy4332         124 VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS---FTEI--HLFLQRK  178 (188)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~el--~~~l~~~  178 (188)
                      ....+..+..   ..........+.++.+++.+|+ .+|++|++   ++++  |+||+.+
T Consensus       256 ~~~~i~~~~~---~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         256 TQMKVINWQT---SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             HHHHHHccCC---CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            5555543221   1112223456789999999976 59999997   8888  7777654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.95  E-value=6.7e-27  Score=171.82  Aligned_cols=154  Identities=29%  Similarity=0.552  Sum_probs=121.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++|++|+|+||        +||+++.++.++|+|||.+....... ........++..|++||.+.
T Consensus       106 ~~~~~l~~aL~~lH~~~i~H~dl~p--------~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  176 (260)
T cd05073         106 DFSAQIAEGMAFIEQRNYIHRDLRA--------ANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             HHHHHHHHHHHHHHhCCccccccCc--------ceEEEcCCCcEEECCCcceeeccCCC-cccccCCcccccccCHhHhc
Confidence            3567899999999999999999999        99999999999999999886654322 11222233456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++|+ |..||.+.........+....      ........+.++.+++.+||..+|++||+
T Consensus       177 ~~~~~~~~Di~slG~~l~~l~t~-g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  249 (260)
T cd05073         177 FGSFTIKSDVWSFGILLMEIVTY-GRIPYPGMSNPEVIRALERGY------RMPRPENCPEELYNIMMRCWKNRPEERPT  249 (260)
T ss_pred             cCCcCccccchHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHhCCC------CCCCcccCCHHHHHHHHHHcccCcccCcC
Confidence            88889999999999999999962 678998877655555443211      11122456789999999999999999999


Q ss_pred             HHHHHHHHHh
Q psy4332         168 FTEIHLFLQR  177 (188)
Q Consensus       168 ~~el~~~l~~  177 (188)
                      +.++...|++
T Consensus       250 ~~~l~~~L~~  259 (260)
T cd05073         250 FEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHhc
Confidence            9999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=1.6e-27  Score=177.11  Aligned_cols=151  Identities=21%  Similarity=0.268  Sum_probs=111.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+|+|+||        +||+++.++.++|+|||++.......  .......+++.|+|||.+.+
T Consensus       106 ~~~qi~~~L~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  175 (285)
T cd07861         106 YLYQILQGILFCHSRRVLHRDLKP--------QNLLIDNKGVIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLG  175 (285)
T ss_pred             HHHHHHHHHHHHHhCCeeecCCCH--------HHEEEcCCCcEEECcccceeecCCCc--ccccCCcccccccChHHhcC
Confidence            467899999999999999999999        99999999999999999987553322  12233456778999999865


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC----------------------CCCcccCCCCC
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD----------------------DGEFIYLPTPQ  145 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~  145 (188)
                      . .++.++|+||+|+++++++|  |..||.+................                      ...........
T Consensus       176 ~~~~~~~~Dv~slG~il~~l~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (285)
T cd07861         176 SPRYSTPVDIWSIGTIFAEMAT--KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKN  253 (285)
T ss_pred             CCCcCcHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCC
Confidence            4 46889999999999999995  56788766543322221110000                      00000111234


Q ss_pred             ChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         146 TTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       146 ~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      .+.++.+++.+||..||++|||++++
T Consensus       254 ~~~~~~~li~~~l~~dP~~Rpt~~~l  279 (285)
T cd07861         254 LDEDGLDLLEKMLIYDPAKRISAKKA  279 (285)
T ss_pred             CCHHHHHHHHHHhcCChhhCCCHHHH
Confidence            67889999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.95  E-value=3.3e-27  Score=176.43  Aligned_cols=157  Identities=20%  Similarity=0.280  Sum_probs=120.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.++.|+|++||+|+|+||        .||+++.++.++|+|||++.......  .......++..|+|||.+.
T Consensus       122 ~~~~qi~~~l~~LH~~~ivH~dlkp--------~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  191 (292)
T cd06658         122 TVCLSVLRALSYLHNQGVIHRDIKS--------DSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSLVGTPYWMAPEVIS  191 (292)
T ss_pred             HHHHHHHHHHHHHHHCCEeecCCCH--------HHEEEcCCCCEEEccCcchhhccccc--ccCceeecCccccCHHHHc
Confidence            4567888999999999999999999        99999999999999999876543222  1122344677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||...........+....    ..........+..+.+++.+||..||++||+
T Consensus       192 ~~~~~~~~Dv~slGvil~el~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt  265 (292)
T cd06658         192 RLPYGTEVDIWSLGIMVIEMI--DGEPPYFNEPPLQAMRRIRDNL----PPRVKDSHKVSSVLRGFLDLMLVREPSQRAT  265 (292)
T ss_pred             cCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhcC----CCccccccccCHHHHHHHHHHccCChhHCcC
Confidence            878899999999999999999  5678888776555444332211    0111112345778999999999999999999


Q ss_pred             HHHH--HHHHHhccC
Q psy4332         168 FTEI--HLFLQRKNL  180 (188)
Q Consensus       168 ~~el--~~~l~~~~~  180 (188)
                      ++++  ++||.....
T Consensus       266 ~~~il~~~~~~~~~~  280 (292)
T cd06658         266 AQELLQHPFLKLAGP  280 (292)
T ss_pred             HHHHhhChhhhccCC
Confidence            9999  677876544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=2e-27  Score=176.57  Aligned_cols=152  Identities=22%  Similarity=0.252  Sum_probs=109.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+|+|+||        +||+++.++.++|+|||++.......  .......++..|+|||.+.
T Consensus       103 ~~~~qi~~al~~LH~~~i~H~dl~~--------~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  172 (284)
T cd07839         103 SFMFQLLKGLAFCHSHNVLHRDLKP--------QNLLINKNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLF  172 (284)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCH--------HHEEEcCCCcEEECccchhhccCCCC--CCcCCCccccCCcChHHHh
Confidence            4567899999999999999999999        99999999999999999987653322  1223345677899999987


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHhCCCCCC-CCCCCHHHHHHHhhcccCCC--------------CCcc--------cCCC
Q psy4332          88 LRK-FTTKSDVWSFGVTLWEILNLARHRP-YEGLTDLEVLENISHLHADD--------------GEFI--------YLPT  143 (188)
Q Consensus        88 ~~~-~~~~~di~slG~~~~~l~t~~~~~p-~~~~~~~~~~~~~~~~~~~~--------------~~~~--------~~~~  143 (188)
                      +.. ++.++||||+|+++++++|  |..| |.+.+..+....+.......              ....        ....
T Consensus       173 ~~~~~~~~~DiwslG~il~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (284)
T cd07839         173 GAKLYSTSIDMWSAGCIFAELAN--AGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVV  250 (284)
T ss_pred             CCcccCcHHHHHHHHHHHHHHHh--cCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhc
Confidence            644 6889999999999999996  4455 44444333332221110000              0000        0112


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      +..+.++.+++.+||..||.+|||++++
T Consensus       251 ~~~~~~~~~li~~~l~~~P~~R~t~~~i  278 (284)
T cd07839         251 PKLNSTGRDLLQNLLVCNPVQRISAEEA  278 (284)
T ss_pred             ccCCHHHHHHHHHHhcCChhhcCCHHHH
Confidence            3457889999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.95  E-value=6.1e-27  Score=172.81  Aligned_cols=157  Identities=27%  Similarity=0.510  Sum_probs=120.5

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCC-C--CCCccccch
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDN-T--SLPIRWMAW   83 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~-~--~~~~~~~~P   83 (188)
                      ..++.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++.............. .  ..+..|++|
T Consensus       109 ~~i~~~l~~al~~lH~~g~~H~dl~p--------~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~P  180 (269)
T cd05065         109 VGMLRGIAAGMKYLSEMNYVHRDLAA--------RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP  180 (269)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccCh--------heEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCH
Confidence            34567888999999999999999999        999999999999999998765543221111111 1  123579999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++||||+|++++|+++ .|..||.+....+....+...      .........+..+.+++.+||..+|+
T Consensus       181 E~~~~~~~~~~~DvwslG~~l~e~l~-~g~~p~~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~~li~~~l~~~p~  253 (269)
T cd05065         181 EAIAYRKFTSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVINAIEQD------YRLPPPMDCPTALHQLMLDCWQKDRN  253 (269)
T ss_pred             hHhccCcccchhhhhhhHHHHHHHhc-CCCCCCCCCCHHHHHHHHHcC------CcCCCcccCCHHHHHHHHHHcCCChh
Confidence            99988888999999999999999885 367899887766655554321      11112245678899999999999999


Q ss_pred             CCCCHHHHHHHHHhc
Q psy4332         164 ERPSFTEIHLFLQRK  178 (188)
Q Consensus       164 ~Rps~~el~~~l~~~  178 (188)
                      +||+++++...|+++
T Consensus       254 ~Rp~~~~i~~~l~~~  268 (269)
T cd05065         254 ARPKFGQIVSTLDKM  268 (269)
T ss_pred             hCcCHHHHHHHHHhh
Confidence            999999998887753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=4.9e-27  Score=171.87  Aligned_cols=148  Identities=16%  Similarity=0.242  Sum_probs=117.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++++|||++........  ......++..|+|||++.
T Consensus       105 ~i~~~l~~al~~lH~~~i~h~dl~~--------~nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  174 (256)
T cd08529         105 RFFIQILLGLAHLHSKKILHRDIKS--------LNLFLDAYDNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCE  174 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCc--------ceEEEeCCCCEEEcccccceeccCccc--hhhccccCccccCHHHhc
Confidence            3567889999999999999999999        999999999999999999876644322  122345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||||+++++++  +|..||...........+....     ... .....+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~  246 (256)
T cd08529         175 DKPYNEKSDVWALGVVLYECC--TGKHPFDANNQGALILKIIRGV-----FPP-VSQMYSQQLAQLIDQCLTKDYRQRPD  246 (256)
T ss_pred             CCCCCCccchHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCC-----CCC-CccccCHHHHHHHHHHccCCcccCcC
Confidence            888899999999999999999  5678998877655555544321     111 11246789999999999999999999


Q ss_pred             HHHHHH
Q psy4332         168 FTEIHL  173 (188)
Q Consensus       168 ~~el~~  173 (188)
                      +.++++
T Consensus       247 ~~~ll~  252 (256)
T cd08529         247 TFQLLR  252 (256)
T ss_pred             HHHHhh
Confidence            999843

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=4.1e-28  Score=186.23  Aligned_cols=156  Identities=20%  Similarity=0.281  Sum_probs=120.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--------------------
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--------------------   68 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--------------------   68 (188)
                      .+.+++.++.|+|++||+||||||        +||+++.++.++|+|||++.........                    
T Consensus       106 ~~~qi~~~L~~lH~~givHrDLkp--------~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (360)
T cd05627         106 YIAETVLAIDAIHQLGFIHRDIKP--------DNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMN  177 (360)
T ss_pred             HHHHHHHHHHHHHHCCeEccCCCH--------HHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccc
Confidence            467888999999999999999999        9999999999999999997654321100                    


Q ss_pred             -------------cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC
Q psy4332          69 -------------RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD  135 (188)
Q Consensus        69 -------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~  135 (188)
                                   .......||+.|+|||++.+..++.++|+||+||++|+|+  +|..||.+.........+..+..  
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~--tG~~Pf~~~~~~~~~~~i~~~~~--  253 (360)
T cd05627         178 SKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML--IGYPPFCSETPQETYRKVMNWKE--  253 (360)
T ss_pred             cccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecc--cCCCCCCCCCHHHHHHHHHcCCC--
Confidence                         0011345889999999999888999999999999999999  67889998887777666654321  


Q ss_pred             CCcccCCCCCChHHHHHHHHHHhccCCCCCCC---HHHH--HHHHHhc
Q psy4332         136 GEFIYLPTPQTTKDILDLMNECWKRSPTERPS---FTEI--HLFLQRK  178 (188)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~el--~~~l~~~  178 (188)
                       .....+....+.++.+++.+|+ .+|++|++   +.++  |+||+.+
T Consensus       254 -~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         254 -TLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             -ceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence             1111222346789999999977 49999984   7788  8888754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.7e-27  Score=174.36  Aligned_cols=157  Identities=24%  Similarity=0.371  Sum_probs=123.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|+++++|+|++|        +||+++.++.++++|||++.......  .......++..|++||.+
T Consensus       101 ~~~~~ql~~~l~~lh~~~i~h~dl~p--------~ni~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~  170 (274)
T cd06609         101 AFILREVLLGLEYLHEEGKIHRDIKA--------ANILLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVI  170 (274)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCH--------HHEEECCCCCEEEcccccceeecccc--cccccccCCccccChhhh
Confidence            34567888999999999999999999        99999999999999999987765432  122334566789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+||+|+++|+++  +|..||....+......+...     .........++.++.+++.+||..+|++||
T Consensus       171 ~~~~~~~~sDv~slG~il~~l~--tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rp  243 (274)
T cd06609         171 KQSGYDEKADIWSLGITAIELA--KGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVSLCLNKDPKERP  243 (274)
T ss_pred             ccCCCCchhhHHHHHHHHHHHH--hCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHHHHhhCChhhCc
Confidence            8888999999999999999999  567899876655544433321     111112222678999999999999999999


Q ss_pred             CHHHH--HHHHHhccC
Q psy4332         167 SFTEI--HLFLQRKNL  180 (188)
Q Consensus       167 s~~el--~~~l~~~~~  180 (188)
                      +++++  |+||++..+
T Consensus       244 t~~~il~~~~~~~~~~  259 (274)
T cd06609         244 SAKELLKHKFIKKAKK  259 (274)
T ss_pred             CHHHHhhChhhcCCCc
Confidence            99999  788876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=2.7e-27  Score=173.37  Aligned_cols=147  Identities=19%  Similarity=0.273  Sum_probs=117.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.++|++||+|+|+||        +||+++.++.++++|||++........  ......++..|+|||.+.+
T Consensus       105 ~~~~i~~al~~lH~~~i~H~dl~p--------~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~  174 (255)
T cd08219         105 WFVQMCLGVQHIHEKRVLHRDIKS--------KNIFLTQNGKVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWEN  174 (255)
T ss_pred             HHHHHHHHHHHHhhCCcccCCCCc--------ceEEECCCCcEEEcccCcceeeccccc--ccccccCCccccCHHHHcc
Confidence            467899999999999999999999        999999999999999999876643321  1223456778999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ...+.++|+||+|+++++++  .|..||...........+....     . .......+..+.+++.+||+.||++||++
T Consensus       175 ~~~~~~~Dv~slG~i~~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  246 (255)
T cd08219         175 MPYNNKSDIWSLGCILYELC--TLKHPFQANSWKNLILKVCQGS-----Y-KPLPSHYSYELRSLIKQMFKRNPRSRPSA  246 (255)
T ss_pred             CCcCchhhhhhhchhheehh--hccCCCCCCCHHHHHHHHhcCC-----C-CCCCcccCHHHHHHHHHHHhCCcccCCCH
Confidence            88899999999999999999  5678998876655554443221     1 11123457789999999999999999999


Q ss_pred             HHHHH
Q psy4332         169 TEIHL  173 (188)
Q Consensus       169 ~el~~  173 (188)
                      .++..
T Consensus       247 ~~il~  251 (255)
T cd08219         247 TTILS  251 (255)
T ss_pred             HHHhh
Confidence            99854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.9e-28  Score=186.39  Aligned_cols=155  Identities=19%  Similarity=0.259  Sum_probs=117.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc-------------c-------
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY-------------Y-------   68 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~-------------~-------   68 (188)
                      .+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++.......             .       
T Consensus       106 ~~~ql~~aL~~LH~~givHrDlkp--------~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (377)
T cd05629         106 YMAECVLAIEAVHKLGFIHRDIKP--------DNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRN  177 (377)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCH--------HHEEECCCCCEEEeeccccccccccccccccccccccccccccccccc
Confidence            467899999999999999999999        999999999999999999863311000             0       


Q ss_pred             -------------------------cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH
Q psy4332          69 -------------------------RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE  123 (188)
Q Consensus        69 -------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~  123 (188)
                                               .......||+.|+|||++.+..++.++||||+||++|+++  +|..||.+....+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell--tG~~Pf~~~~~~~  255 (377)
T cd05629         178 SVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECL--IGWPPFCSENSHE  255 (377)
T ss_pred             ccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhh--cCCCCCCCCCHHH
Confidence                                     0001235888999999998888999999999999999999  6788998877766


Q ss_pred             HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC---CCHHHH--HHHHHh
Q psy4332         124 VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER---PSFTEI--HLFLQR  177 (188)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R---ps~~el--~~~l~~  177 (188)
                      ....+..+...   .........+.++.+++.+|+. +|.+|   +++.++  |+||+.
T Consensus       256 ~~~~i~~~~~~---~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         256 TYRKIINWRET---LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             HHHHHHccCCc---cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            66555433211   1111223467899999999997 66665   599998  777764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.94  E-value=2.3e-27  Score=176.17  Aligned_cols=155  Identities=24%  Similarity=0.322  Sum_probs=118.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++.......  .......++..|++||.+.
T Consensus       107 ~~~~qi~~~L~~LH~~~i~H~dlkp--------~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         107 VVCKQTLEALNYLHENKIIHRDLKA--------GNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCc--------ccEEEccCCCEEEccccccccccccc--cccccccccccccCHhhcc
Confidence            3567889999999999999999999        99999999999999999986653321  1223345778899999984


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                           +..++.++|+||+|+++++++  .|..||......+....+.....   .. ......++.++.+++.+||..+|
T Consensus       177 ~~~~~~~~~~~~~Dv~slGvil~el~--~g~~p~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~li~~~l~~~p  250 (282)
T cd06643         177 CETSKDRPYDYKADVWSLGITLIEMA--QIEPPHHELNPMRVLLKIAKSEP---PT-LAQPSRWSSEFKDFLKKCLEKNV  250 (282)
T ss_pred             ccCCCCCCCCccchhhhHHHHHHHHc--cCCCCccccCHHHHHHHHhhcCC---CC-CCCccccCHHHHHHHHHHccCCh
Confidence                 334678999999999999999  56789887765554444432211   11 11123467899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhc
Q psy4332         163 TERPSFTEI--HLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~  178 (188)
                      ++||+++++  |+|+...
T Consensus       251 ~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         251 DARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             hhCcCHHHHhcCCCEecc
Confidence            999999999  6666543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4278|consensus

Probab=99.94  E-value=3.1e-27  Score=184.25  Aligned_cols=155  Identities=34%  Similarity=0.604  Sum_probs=129.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .||.+|+.+..||.++.+|||||-.        .|+|++++..+|++|||+++.+. +..|..+....-+..|.|||.+.
T Consensus       369 yMAtQIsSaMeYLEkknFIHRDLAA--------RNCLVgEnhiVKvADFGLsRlMt-gDTYTAHAGAKFPIKWTAPEsLA  439 (1157)
T KOG4278|consen  369 YMATQISSAMEYLEKKNFIHRDLAA--------RNCLVGENHIVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA  439 (1157)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhh--------hhccccccceEEeeccchhhhhc-CCceecccCccCcccccCccccc
Confidence            5789999999999999999999999        99999999999999999988774 33444445555667899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      .+.++-|+|||+||+++||+.| +|-.||.+.+..+...-+.+.     .+.. ....+++.+.+||+.||...|.+||+
T Consensus       440 yNtFSiKSDVWAFGVLLWEIAT-YGMsPYPGidlSqVY~LLEkg-----yRM~-~PeGCPpkVYeLMraCW~WsPsDRPs  512 (1157)
T KOG4278|consen  440 YNTFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYGLLEKG-----YRMD-GPEGCPPKVYELMRACWNWSPSDRPS  512 (1157)
T ss_pred             ccccccchhhHHHHHHHHHHHh-cCCCCCCCccHHHHHHHHhcc-----cccc-CCCCCCHHHHHHHHHHhcCCcccCcc
Confidence            9999999999999999999999 578999998866655444322     2211 12567889999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      |.|+|+.|+.+
T Consensus       513 FaeiHqafEtm  523 (1157)
T KOG4278|consen  513 FAEIHQAFETM  523 (1157)
T ss_pred             HHHHHHHHHHH
Confidence            99999888754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.94  E-value=1.7e-27  Score=176.86  Aligned_cols=147  Identities=20%  Similarity=0.290  Sum_probs=113.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh-
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   87 (188)
                      ++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++.......  .......++..|+|||.+. 
T Consensus       126 ~~~qi~~al~~LH~~~ivH~dl~~--------~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~  195 (282)
T cd06636         126 ICREILRGLAHLHAHKVIHRDIKG--------QNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIAC  195 (282)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCc
Confidence            456789999999999999999999        99999999999999999977553221  1223445778899999985 


Q ss_pred             ----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 ----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                          ...++.++|+||+|+++|+++  +|..||....+......+...     .........++.++.+++.+||..||.
T Consensus       196 ~~~~~~~~~~~~DvwslG~~l~el~--~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~  268 (282)
T cd06636         196 DENPDATYDYRSDIWSLGITAIEMA--EGAPPLCDMHPMRALFLIPRN-----PPPKLKSKKWSKKFIDFIEGCLVKNYL  268 (282)
T ss_pred             ccCcCcCCCcccchhHHHHHHHHHH--hCCCCccccCHHhhhhhHhhC-----CCCCCcccccCHHHHHHHHHHhCCChh
Confidence                245778999999999999999  567898776544433332211     111222345678999999999999999


Q ss_pred             CCCCHHHHH
Q psy4332         164 ERPSFTEIH  172 (188)
Q Consensus       164 ~Rps~~el~  172 (188)
                      +||++.|++
T Consensus       269 ~Rp~~~ell  277 (282)
T cd06636         269 SRPSTEQLL  277 (282)
T ss_pred             hCcCHHHHh
Confidence            999999983

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=6.7e-27  Score=173.33  Aligned_cols=154  Identities=21%  Similarity=0.334  Sum_probs=120.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|++|        +||+++.++.++++|||++........  ......++..|++||.+.
T Consensus       105 ~~~~~i~~~l~~lH~~~ivH~dl~p--------~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  174 (277)
T cd06642         105 TILREILKGLDYLHSERKIHRDIKA--------ANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             HHHHHHHHHHHHHhcCCeeccCCCh--------heEEEeCCCCEEEccccccccccCcch--hhhcccCcccccCHHHhC
Confidence            4677889999999999999999999        999999999999999999876643321  122334677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  +|..||....+......+....     . .......+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Dv~slG~il~el~--tg~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~  246 (277)
T cd06642         175 QSAYDFKADIWSLGITAIELA--KGEPPNSDLHPMRVLFLIPKNS-----P-PTLEGQYSKPFKEFVEACLNKDPRFRPT  246 (277)
T ss_pred             cCCCchhhhHHHHHHHHHHHH--hCCCCCcccchhhHHhhhhcCC-----C-CCCCcccCHHHHHHHHHHccCCcccCcC
Confidence            888899999999999999999  5678887665444433322111     1 1112345778999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      +.++  |+|++...
T Consensus       247 ~~~il~~~~~~~~~  260 (277)
T cd06642         247 AKELLKHKFITRYT  260 (277)
T ss_pred             HHHHHHhHHHHHHh
Confidence            9999  67887543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.94  E-value=1.1e-26  Score=171.30  Aligned_cols=156  Identities=28%  Similarity=0.509  Sum_probs=122.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|++|++|+|+||        .||+++.++.++++|||++.......... ......++..|++||.+
T Consensus       110 ~i~~~i~~~l~~lH~~~i~h~dlkp--------~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~  181 (267)
T cd05066         110 GMLRGIASGMKYLSDMGYVHRDLAA--------RNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI  181 (267)
T ss_pred             HHHHHHHHHHHHHHHCCEeehhhch--------hcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHh
Confidence            4567888999999999999999999        99999999999999999987765432211 11122234579999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+|++|++++++++ .|..||.+....+....+....     . .......+..+.+++.+||+.+|++||
T Consensus       182 ~~~~~~~~~Dv~slG~~l~ell~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (267)
T cd05066         182 AYRKFTSASDVWSYGIVMWEVMS-YGERPYWEMSNQDVIKAIEEGY-----R-LPAPMDCPAALHQLMLDCWQKDRNERP  254 (267)
T ss_pred             ccCccCchhhhHHHHHHHHHHhc-CCCCCcccCCHHHHHHHHhCCC-----c-CCCCCCCCHHHHHHHHHHcccCchhCC
Confidence            88889999999999999999885 3778998877666555544321     1 111234678999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.++++.|+++
T Consensus       255 ~~~~i~~~l~~~  266 (267)
T cd05066         255 KFEQIVSILDKL  266 (267)
T ss_pred             CHHHHHHHHHhh
Confidence            999999888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.94  E-value=4.2e-28  Score=187.15  Aligned_cols=156  Identities=21%  Similarity=0.255  Sum_probs=119.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc----------------------
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD----------------------   66 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~----------------------   66 (188)
                      .+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++..+....                      
T Consensus       106 ~~~qi~~al~~lH~~~ivHrDlkp--------~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (376)
T cd05598         106 YIAELTCAIESVHKMGFIHRDIKP--------DNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW  177 (376)
T ss_pred             HHHHHHHHHHHHHHCCeEeCCCCH--------HHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccc
Confidence            456889999999999999999999        99999999999999999875321000                      


Q ss_pred             -------------------cccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH
Q psy4332          67 -------------------YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN  127 (188)
Q Consensus        67 -------------------~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~  127 (188)
                                         .........||+.|+|||++.+..++.++||||+||++|+|+  +|..||.+....+....
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell--~G~~Pf~~~~~~~~~~~  255 (376)
T cd05598         178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML--VGQPPFLADTPAETQLK  255 (376)
T ss_pred             cccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh--hCCCCCCCCCHHHHHHH
Confidence                               000011245889999999999888999999999999999999  67889998877666555


Q ss_pred             hhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC---CHHHH--HHHHHhc
Q psy4332         128 ISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP---SFTEI--HLFLQRK  178 (188)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---s~~el--~~~l~~~  178 (188)
                      +..+..   ..........+.++.+++.+|+ .+|.+|+   ++.++  |+||+.+
T Consensus       256 i~~~~~---~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         256 VINWET---TLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             HhccCc---cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            543221   1112223456788999999976 5999999   89999  7787654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=2.8e-27  Score=177.17  Aligned_cols=160  Identities=23%  Similarity=0.304  Sum_probs=121.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+.|++|+||||        +||+++.++.++|+|||++.......  .......+++.|++||.+.
T Consensus       119 ~~~~~l~~~L~~LH~~~i~H~dL~p--------~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  188 (297)
T cd06656         119 AVCRECLQALDFLHSNQVIHRDIKS--------DNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVT  188 (297)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEECcCccceEccCCc--cCcCcccCCccccCHHHHc
Confidence            3566788999999999999999999        99999999999999999876553322  1122345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++  .|..||.+............    .+..........+..+.+++.+||..+|++||+
T Consensus       189 ~~~~~~~~Di~slGvil~~l~--tg~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  262 (297)
T cd06656         189 RKAYGPKVDIWSLGIMAIEMV--EGEPPYLNENPLRALYLIAT----NGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS  262 (297)
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCcchheeeecc----CCCCCCCCccccCHHHHHHHHHHccCChhhCcC
Confidence            888899999999999999999  56789877654332221111    111111222445778999999999999999999


Q ss_pred             HHHH--HHHHHhccCCCC
Q psy4332         168 FTEI--HLFLQRKNLGYV  183 (188)
Q Consensus       168 ~~el--~~~l~~~~~~~~  183 (188)
                      ++++  |+||+.......
T Consensus       263 ~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         263 AKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHHHhcCchhcccccccc
Confidence            9999  778886655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=3.8e-27  Score=173.57  Aligned_cols=149  Identities=23%  Similarity=0.358  Sum_probs=115.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc----cccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY----RVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.++.++|++|++|+|++|        +||+++.++.++|+|||+++........    .......++..|++|
T Consensus       110 ~~~~~l~~~l~~lH~~~ivH~di~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p  181 (267)
T cd06628         110 NFVRQILKGLNYLHNRGIIHRDIKG--------ANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP  181 (267)
T ss_pred             HHHHHHHHHHHHHHhcCcccccCCH--------HHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccCh
Confidence            4567888999999999999999999        9999999999999999998766422110    011223467789999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++|+||+|+++++++  +|..||.+.........+...     .. .......+.++.+++.+||+.||+
T Consensus       182 e~~~~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~li~~~l~~~p~  253 (267)
T cd06628         182 EVVKQTSYTRKADIWSLGCLVVEML--TGKHPFPDCTQLQAIFKIGEN-----AS-PEIPSNISSEAIDFLEKTFEIDHN  253 (267)
T ss_pred             hHhccCCCCchhhhHHHHHHHHHHh--hCCCCCCCccHHHHHHHHhcc-----CC-CcCCcccCHHHHHHHHHHccCCch
Confidence            9998888889999999999999999  567899876554433333221     11 112245678999999999999999


Q ss_pred             CCCCHHHHH
Q psy4332         164 ERPSFTEIH  172 (188)
Q Consensus       164 ~Rps~~el~  172 (188)
                      +||++.++.
T Consensus       254 ~Rp~~~~il  262 (267)
T cd06628         254 KRPTAAELL  262 (267)
T ss_pred             hCcCHHHHh
Confidence            999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=5.9e-27  Score=176.23  Aligned_cols=166  Identities=25%  Similarity=0.248  Sum_probs=124.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++|++|+||||        +||+++.++.++|+|||++........  .......+..|+|||.+
T Consensus       111 ~~~~~qi~~~l~~lH~~~i~H~dl~p--------~nil~~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~  180 (309)
T cd07845         111 KCLMLQLLRGLQYLHENFIIHRDLKV--------SNLLLTDKGCLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELL  180 (309)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCCEEECccceeeecCCccC--CCCcccccccccChhhh
Confidence            34678899999999999999999999        999999999999999999876643321  11223346679999998


Q ss_pred             hc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-------------cC----------C
Q psy4332          87 RL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-------------YL----------P  142 (188)
Q Consensus        87 ~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------~~----------~  142 (188)
                      .+ ..++.++||||+|+++|+++  .|..||.+....+....+...........             ..          .
T Consensus       181 ~~~~~~~~~~DvwslG~il~el~--~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (309)
T cd07845         181 LGCTTYTTAIDMWAVGCILAELL--AHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHK  258 (309)
T ss_pred             cCCCCcCchHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHh
Confidence            75 34788999999999999999  56789988776666555443211110000             00          0


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVP  184 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~  184 (188)
                      ....+.++.+++.+||..||++||+++++  |+||++..-...+
T Consensus       259 ~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~  302 (309)
T cd07845         259 FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEP  302 (309)
T ss_pred             ccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCC
Confidence            11246788999999999999999999999  8999876655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0604|consensus

Probab=99.94  E-value=3.9e-28  Score=174.40  Aligned_cols=155  Identities=19%  Similarity=0.282  Sum_probs=123.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      +.++|..|+.|||+.+|+|||+||        +|+|...   +..+||+|||+++.....+   .....+.|+.|.|||+
T Consensus       166 I~~qI~~Av~~lH~~nIAHRDlKp--------ENLLyt~t~~na~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPev  234 (400)
T KOG0604|consen  166 IMKQIGLAVRYLHSMNIAHRDLKP--------ENLLYTTTSPNAPLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEV  234 (400)
T ss_pred             HHHHHHHHHHHHHhcchhhccCCh--------hheeeecCCCCcceEecccccccccCCCc---cccCCcccccccCHHH
Confidence            456788999999999999999999        8888764   4558999999998876543   3345667899999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH----HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD----LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +-..++...+|+||+|+++|-++  +|..||.+...    .....++..+..   .++.......+++..++|+++|..+
T Consensus       235 lg~eKydkscdmwSlgVimYIlL--CGyPPFYS~hg~aispgMk~rI~~gqy---~FP~pEWs~VSe~aKdlIR~LLkt~  309 (400)
T KOG0604|consen  235 LGPEKYDKSCDMWSLGVIMYILL--CGYPPFYSNHGLAISPGMKRRIRTGQY---EFPEPEWSCVSEAAKDLIRKLLKTE  309 (400)
T ss_pred             hCchhcCCCCCccchhHHHHHhh--cCCCcccccCCccCChhHHhHhhccCc---cCCChhHhHHHHHHHHHHHHHhcCC
Confidence            98888999999999999999999  88999976432    234444443332   2233344667899999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhcc
Q psy4332         162 PTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~  179 (188)
                      |.+|.+++++  |+|+.+-.
T Consensus       310 PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  310 PTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             chhheeHHHhhcCchhcccc
Confidence            9999999999  88987654

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=5.2e-27  Score=174.75  Aligned_cols=157  Identities=19%  Similarity=0.292  Sum_probs=122.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++||+|+||+|        .||+++.++.++++|||.+.......  .......++..|++||.+.
T Consensus       119 ~~~~ql~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  188 (285)
T cd06648         119 TVCLAVLKALSFLHAQGVIHRDIKS--------DSILLTSDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVIS  188 (285)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCh--------hhEEEcCCCcEEEcccccchhhccCC--cccccccCCccccCHHHhc
Confidence            4667889999999999999999999        99999999999999999876543321  1223345778899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||.+.........+....    ..........+..+.+++.+||..+|++||+
T Consensus       189 ~~~~~~~~Dv~slGv~l~ell--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  262 (285)
T cd06648         189 RLPYGTEVDIWSLGIMVIEMV--DGEPPYFNEPPLQAMKRIRDNL----PPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT  262 (285)
T ss_pred             CCCCCCcccHHHHHHHHHHHH--hCCCCCcCCCHHHHHHHHHhcC----CCCCcccccCCHHHHHHHHHHcccChhhCcC
Confidence            878899999999999999999  5677888776655555444321    1111112236779999999999999999999


Q ss_pred             HHHH--HHHHHhccC
Q psy4332         168 FTEI--HLFLQRKNL  180 (188)
Q Consensus       168 ~~el--~~~l~~~~~  180 (188)
                      ++++  |+|+++...
T Consensus       263 ~~~il~~~~~~~~~~  277 (285)
T cd06648         263 AAELLNHPFLAKAGP  277 (285)
T ss_pred             HHHHccCcccccCCC
Confidence            9999  788877653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=3.6e-27  Score=173.77  Aligned_cols=153  Identities=20%  Similarity=0.276  Sum_probs=115.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+++|+|+|+||        +||+++.++.++|+|||++.......... ......++..|+|||.+
T Consensus       110 ~~~~qi~~~l~~LH~~~i~H~~l~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (266)
T cd06651         110 KYTRQILEGMSYLHSNMIVHRDIKG--------ANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVI  181 (266)
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCH--------HHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHh
Confidence            3577899999999999999999999        99999999999999999987653321111 11233467789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+||+|+++++++  +|..||................    .. .......+..+.+++ +||..+|++||
T Consensus       182 ~~~~~~~~~Dv~slG~i~~el~--~g~~pf~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~li-~~~~~~p~~Rp  253 (266)
T cd06651         182 SGEGYGRKADVWSLGCTVVEML--TEKPPWAEYEAMAAIFKIATQP----TN-PQLPSHISEHARDFL-GCIFVEARHRP  253 (266)
T ss_pred             CCCCCCchhhhHHHHHHHHHHH--HCCCCccccchHHHHHHHhcCC----CC-CCCchhcCHHHHHHH-HHhcCChhhCc
Confidence            8888899999999999999999  4678998775544443332211    11 111233466788888 68889999999


Q ss_pred             CHHHH--HHHHH
Q psy4332         167 SFTEI--HLFLQ  176 (188)
Q Consensus       167 s~~el--~~~l~  176 (188)
                      +++|+  |++|+
T Consensus       254 ~~~eil~hp~~~  265 (266)
T cd06651         254 SAEELLRHPFAQ  265 (266)
T ss_pred             CHHHHhcCcccc
Confidence            99999  67764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=5.3e-27  Score=175.69  Aligned_cols=155  Identities=19%  Similarity=0.309  Sum_probs=120.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++|++|+|+||        .||+++.++.++|+|||++.......  .......++..|+|||.+.
T Consensus       121 ~~~~qi~~~L~~LH~~~ivH~dl~p--------~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  190 (297)
T cd06659         121 TVCESVLQALCYLHSQGVIHRDIKS--------DSILLTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVIS  190 (297)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHeEEccCCcEEEeechhHhhccccc--ccccceecCccccCHHHHc
Confidence            4567889999999999999999999        99999999999999999876553322  1123345778899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||......+....+....    ..........+..+.+++.+||..+|++||+
T Consensus       191 ~~~~~~~~Dv~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps  264 (297)
T cd06659         191 RTPYGTEVDIWSLGIMVIEMV--DGEPPYFSDSPVQAMKRLRDSP----PPKLKNAHKISPVLRDFLERMLTREPQERAT  264 (297)
T ss_pred             cCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhccC----CCCccccCCCCHHHHHHHHHHhcCCcccCcC
Confidence            888899999999999999999  5678988776555444433211    1111122346778999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      ++++  ++++.+.
T Consensus       265 ~~~ll~~~~~~~~  277 (297)
T cd06659         265 AQELLDHPFLLQT  277 (297)
T ss_pred             HHHHhhChhhccC
Confidence            9999  5676644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=5.1e-27  Score=178.01  Aligned_cols=164  Identities=20%  Similarity=0.242  Sum_probs=125.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|++||+|+|+||        .||+++.++.++|+|||++......... .......++..|++||.+
T Consensus       107 ~i~~~l~~~l~~LH~~gi~H~dlkp--------~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  178 (330)
T cd07834         107 YFLYQILRGLKYLHSANVIHRDLKP--------SNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL  178 (330)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceee
Confidence            3677899999999999999999999        9999999999999999998766443210 112234467789999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc------------------------ccC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF------------------------IYL  141 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~  141 (188)
                      .+. ..+.++|+||+|+++++++  +|..||.+....+....+..........                        ...
T Consensus       179 ~~~~~~~~~sDi~slG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (330)
T cd07834         179 LSSSRYTKAIDIWSVGCIFAELL--TRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSK  256 (330)
T ss_pred             ecccCCCcchhHHHHHHHHHHHH--cCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHH
Confidence            877 7889999999999999999  6688998877655544443321111100                        000


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ..+..+.++.+++.+||+.+|++||+++++  |+||++.+..
T Consensus       257 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         257 LFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             hcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            113357789999999999999999999999  7899987654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=4.2e-27  Score=172.21  Aligned_cols=149  Identities=19%  Similarity=0.298  Sum_probs=115.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+.+++|+|++|        .||+++.++.++|+|||++........  ......++..|++||.+.
T Consensus       103 ~~~~~l~~~l~~lh~~~i~H~dl~~--------~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~  172 (256)
T cd06612         103 AILYQTLKGLEYLHSNKKIHRDIKA--------GNILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQ  172 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCc--------ceEEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHh
Confidence            4667888999999999999999999        999999999999999999877654321  122334667899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++  .|..||...........+....    ..........+.++.+++.+||+.+|++||+
T Consensus       173 ~~~~~~~~Di~s~G~il~~l~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps  246 (256)
T cd06612         173 EIGYNNKADIWSLGITAIEMA--EGKPPYSDIHPMRAIFMIPNKP----PPTLSDPEKWSPEFNDFVKKCLVKDPEERPS  246 (256)
T ss_pred             cCCCCchhhHHHHHHHHHHHH--hCCCCCCCcchhhhhhhhccCC----CCCCCchhhcCHHHHHHHHHHHhcChhhCcC
Confidence            888899999999999999999  5677887765544333322111    1111112345678999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      ++++.
T Consensus       247 ~~~il  251 (256)
T cd06612         247 AIQLL  251 (256)
T ss_pred             HHHHh
Confidence            99983

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=3e-27  Score=173.89  Aligned_cols=154  Identities=22%  Similarity=0.323  Sum_probs=117.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~   85 (188)
                      ..+.+++.++.++|++|++|+|+||        +||+++.++.++|+|||++..........  ......++..|++||.
T Consensus       106 ~~~~ql~~al~~lh~~~i~h~~l~p--------~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~  177 (267)
T cd06610         106 TVLKEVLKGLEYLHSNGQIHRDIKA--------GNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEV  177 (267)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHH
Confidence            3467889999999999999999999        99999999999999999987665433221  2233456788999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          86 VRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        86 ~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      +... .++.++|+||+|+++++++  .|..||......+...+...... ...........++.++.+++.+||..||++
T Consensus       178 ~~~~~~~~~~~Dv~slG~i~~~l~--~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  254 (267)
T cd06610         178 MEQVHGYDFKADIWSFGITAIELA--TGAAPYSKYPPMKVLMLTLQNDP-PSLETGADYKKYSKSFRKMISLCLQKDPSK  254 (267)
T ss_pred             HccccCcCcccchHhHhHHHHHHH--hCCCCccccChhhhHHHHhcCCC-CCcCCccccccccHHHHHHHHHHcCCChhh
Confidence            8766 6888999999999999999  56789987766554444432211 111111112356789999999999999999


Q ss_pred             CCCHHHHH
Q psy4332         165 RPSFTEIH  172 (188)
Q Consensus       165 Rps~~el~  172 (188)
                      ||+++++.
T Consensus       255 Rp~~~~ll  262 (267)
T cd06610         255 RPTAEELL  262 (267)
T ss_pred             CcCHHHHh
Confidence            99999983

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.94  E-value=1.5e-26  Score=169.36  Aligned_cols=152  Identities=40%  Similarity=0.727  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.++|++|++|+|+||        +||+++.++.++++|||++............ ...++..|++||.+.
T Consensus       107 ~~~~ql~~~l~~lh~~~~~h~dl~~--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~  177 (258)
T smart00219      107 SFALQIARGMEYLESKNFIHRDLAA--------RNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLK  177 (258)
T ss_pred             HHHHHHHHHHHHHhcCCeeeccccc--------ceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhc
Confidence            4567888999999999999999999        9999999999999999998766544222211 223567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+|++|++++++++ .+..||.........+.+.....      .......+.++.+++.+||..+|++|||
T Consensus       178 ~~~~~~~~Di~slG~i~~~l~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt  250 (258)
T smart00219      178 DGKFTSKSDVWSFGVLLWEIFT-LGESPYPGMSNEEVLEYLKKGYR------LPKPENCPPEIYKLMLQCWAEDPEDRPT  250 (258)
T ss_pred             cCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHhcCCC------CCCCCcCCHHHHHHHHHHCcCChhhCcC
Confidence            7788999999999999999996 35788888776666665543221      1112346789999999999999999999


Q ss_pred             HHHHHHHH
Q psy4332         168 FTEIHLFL  175 (188)
Q Consensus       168 ~~el~~~l  175 (188)
                      +.++...|
T Consensus       251 ~~~ll~~l  258 (258)
T smart00219      251 FSELVEIL  258 (258)
T ss_pred             HHHHHhhC
Confidence            99987654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=7.4e-27  Score=177.78  Aligned_cols=165  Identities=21%  Similarity=0.217  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++++|+|+||        +||+++.++.+||+|||++........  ......++..|+|||.+.
T Consensus       112 ~i~~qi~~aL~~LH~~~i~H~dlkp--------~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  181 (337)
T cd07858         112 YFLYQLLRGLKYIHSANVLHRDLKP--------SNLLLNANCDLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPELLL  181 (337)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCH--------HHEEEcCCCCEEECcCccccccCCCcc--cccccccccCccChHHHh
Confidence            3567889999999999999999999        999999999999999999876643321  112334677899999886


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC------------------------CCCcccCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD------------------------DGEFIYLP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~  142 (188)
                      + ..++.++|+||+|+++++++  .|..||.+.+.......+......                        ........
T Consensus       182 ~~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (337)
T cd07858         182 NCSEYTTAIDVWSVGCIFAELL--GRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARL  259 (337)
T ss_pred             cCCCCCCcccHHHHHHHHHHHH--cCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHH
Confidence            4 45888999999999999999  567888765433222221110000                        00000011


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVP  184 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~  184 (188)
                      .+..+.++.+++.+||..+|++||+++++  |+||+.++.....
T Consensus       260 ~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~  303 (337)
T cd07858         260 FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE  303 (337)
T ss_pred             cccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence            23467889999999999999999999999  8899887554433

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.94  E-value=6.5e-27  Score=177.38  Aligned_cols=163  Identities=17%  Similarity=0.251  Sum_probs=115.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-----ccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-----VHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~   82 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.++++||+........+...     ......++..|+|
T Consensus       105 ~i~~qi~~~L~~LH~~~iiH~dlkp--------~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (327)
T cd08227         105 YILQGVLKALDYIHHMGYVHRSVKA--------SHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLS  176 (327)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCh--------hhEEEecCCcEEEcccchhhccccccccccccccccccccceecccC
Confidence            4567889999999999999999999        99999999999999998644332211100     0112235667999


Q ss_pred             hhhhhc--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC------------------------
Q psy4332          83 WESVRL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG------------------------  136 (188)
Q Consensus        83 Pe~~~~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------  136 (188)
                      ||.+.+  ..++.++||||+|+++++++  .|..||....................                        
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T cd08227         177 PEVLQQNLQGYDAKSDIYSVGITACELA--NGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGL  254 (327)
T ss_pred             hHHhhcccCCCCchhhHHHHHHHHHHHH--HCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCC
Confidence            999975  35788999999999999999  56789876554332222211100000                        


Q ss_pred             ---C------------cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         137 ---E------------FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       137 ---~------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                         .            .........+.++.+++.+||+.||++|||++++  |+||+++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~  315 (327)
T cd08227         255 GESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  315 (327)
T ss_pred             CcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcch
Confidence               0            0000112245689999999999999999999999  789988754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG2345|consensus

Probab=99.94  E-value=1.3e-27  Score=167.46  Aligned_cols=158  Identities=15%  Similarity=0.197  Sum_probs=115.6

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-------ccCCCCCCc
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-------VHDNTSLPI   78 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~   78 (188)
                      .+..++..|+.++|+..  ++|+|+||        .||++++.+.+++.|||++....-....+       .......|.
T Consensus       131 ~if~gic~gL~~lH~~~~~yAH~DiKP--------~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~  202 (302)
T KOG2345|consen  131 WIFLGICRGLEALHEKEPPYAHRDIKP--------ANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTI  202 (302)
T ss_pred             HHHHHHHHHHHHHhccCCcccccCCCc--------ceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCC
Confidence            34567889999999999  99999999        99999999999999999987664221111       112344677


Q ss_pred             cccchhhhh---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          79 RWMAWESVR---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        79 ~~~~Pe~~~---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      .|.|||.+.   +...+.++|||||||++|.++  .+..||.......  ..+ ....-......+..+.+++.+.+++.
T Consensus       203 pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m--f~~sPfe~~~~~G--gSl-aLAv~n~q~s~P~~~~yse~l~~lik  277 (302)
T KOG2345|consen  203 PYRAPELFNVKSHCTITERTDIWSLGCTLYAMM--FGESPFERIYQQG--GSL-ALAVQNAQISIPNSSRYSEALHQLIK  277 (302)
T ss_pred             cccCchheecccCcccccccchhhhhHHHHHHH--HcCCcchHHhhcC--CeE-EEeeeccccccCCCCCccHHHHHHHH
Confidence            899999986   345788999999999999999  6777876432110  000 00000111222333458899999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhc
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      +|++.||.+||++.++...++.+
T Consensus       278 ~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  278 SMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHhcCCcccCCCHHHHHHHHHhh
Confidence            99999999999999997776654

>KOG0614|consensus

Probab=99.94  E-value=2.7e-27  Score=180.44  Aligned_cols=153  Identities=19%  Similarity=0.254  Sum_probs=130.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|||++||++||+||        +|.+++.+|.+||.|||+++.+..+.   .....+||+-|.|||.+.
T Consensus       524 F~~acv~EAfeYLH~k~iIYRDLKP--------ENllLd~~Gy~KLVDFGFAKki~~g~---KTwTFcGTpEYVAPEIIL  592 (732)
T KOG0614|consen  524 FYVACVLEAFEYLHRKGIIYRDLKP--------ENLLLDNRGYLKLVDFGFAKKIGSGR---KTWTFCGTPEYVAPEIIL  592 (732)
T ss_pred             hhHHHHHHHHHHHHhcCceeccCCh--------hheeeccCCceEEeehhhHHHhccCC---ceeeecCCcccccchhhh
Confidence            3455677899999999999999999        99999999999999999999987764   457889999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..-..++|.|++|+++||++  .|.+||++.++......+..+...     ...+..++....+++++++..+|.+|..
T Consensus       593 nKGHD~avDyWaLGIli~ELL--~G~pPFs~~dpmktYn~ILkGid~-----i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  593 NKGHDRAVDYWALGILIYELL--TGSPPFSGVDPMKTYNLILKGIDK-----IEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             ccCcchhhHHHHHHHHHHHHH--cCCCCCCCCchHHHHHHHHhhhhh-----hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            888899999999999999999  678999999999888877654321     1122556778999999999999999986


Q ss_pred             -----HHHH--HHHHHhc
Q psy4332         168 -----FTEI--HLFLQRK  178 (188)
Q Consensus       168 -----~~el--~~~l~~~  178 (188)
                           +.++  |.||...
T Consensus       666 ~~~~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  666 YQKGGINDIKKHRWFEGF  683 (732)
T ss_pred             cccCChHHHHhhhhhhcC
Confidence                 6777  8888754

>KOG0200|consensus

Probab=99.94  E-value=1.4e-26  Score=187.45  Aligned_cols=156  Identities=38%  Similarity=0.696  Sum_probs=127.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCC-CCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT-SLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~Pe~   85 (188)
                      ...+.||+.|..||.+++++|||+-.        .|||+..+..+||+|||+++.......+...... ..+..|||||.
T Consensus       421 lsfa~QIa~GMe~L~~~~~vHRDLAa--------RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEs  492 (609)
T KOG0200|consen  421 LSFAYQIANGMEYLASVPCVHRDLAA--------RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPES  492 (609)
T ss_pred             HHHHHHHHHHHHHHhhCCccchhhhh--------hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHH
Confidence            34578999999999999999999999        9999999999999999999877665555433222 14567999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      +....++.++||||||+++||++|. |..||.+.. ..+..+.+..     +.+...| ..++.++.++|+.||..+|++
T Consensus       493 l~~~~ft~kSDVWSfGI~L~EifsL-G~~PYp~~~~~~~l~~~l~~-----G~r~~~P-~~c~~eiY~iM~~CW~~~p~~  565 (609)
T KOG0200|consen  493 LFDRVFTSKSDVWSFGILLWEIFTL-GGTPYPGIPPTEELLEFLKE-----GNRMEQP-EHCSDEIYDLMKSCWNADPED  565 (609)
T ss_pred             hccCcccccchhhHHHHHHHHHhhC-CCCCCCCCCcHHHHHHHHhc-----CCCCCCC-CCCCHHHHHHHHHHhCCCccc
Confidence            9998999999999999999999984 789999865 5555554432     2222222 345889999999999999999


Q ss_pred             CCCHHHHHHHHHh
Q psy4332         165 RPSFTEIHLFLQR  177 (188)
Q Consensus       165 Rps~~el~~~l~~  177 (188)
                      ||++.++.++|..
T Consensus       566 RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  566 RPTFSECVEFFEK  578 (609)
T ss_pred             CCCHHHHHHHHHH
Confidence            9999999888876

>KOG4257|consensus

Probab=99.94  E-value=2.6e-27  Score=184.39  Aligned_cols=153  Identities=33%  Similarity=0.676  Sum_probs=127.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .|.+|..++.|||++..+||||-.        .|||+.+..++|++|||+++.+.+..-+.. +....+..||+||.++.
T Consensus       496 y~~Qi~talaYLeSkrfVHRDIAa--------RNiLVsSp~CVKLaDFGLSR~~ed~~yYka-S~~kLPIKWmaPESINf  566 (974)
T KOG4257|consen  496 YCYQICTALAYLESKRFVHRDIAA--------RNILVSSPQCVKLADFGLSRYLEDDAYYKA-SRGKLPIKWMAPESINF  566 (974)
T ss_pred             HHHHHHHHHHHHHhhchhhhhhhh--------hheeecCcceeeecccchhhhccccchhhc-cccccceeecCccccch
Confidence            356788899999999999999999        999999999999999999999977665543 34556778999999999


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++..+|||=||+++||+++ -|..||++....+.+-.+.     .+.+.+. ++.++..+..++.+||+.||.+||.+
T Consensus       567 RrFTtASDVWMFgVCmWEIl~-lGvkPfqgvkNsDVI~~iE-----nGeRlP~-P~nCPp~LYslmskcWayeP~kRPrf  639 (974)
T KOG4257|consen  567 RRFTTASDVWMFGVCMWEILS-LGVKPFQGVKNSDVIGHIE-----NGERLPC-PPNCPPALYSLMSKCWAYEPSKRPRF  639 (974)
T ss_pred             hcccchhhHHHHHHHHHHHHH-hcCCccccccccceEEEec-----CCCCCCC-CCCCChHHHHHHHHHhccCcccCCcH
Confidence            999999999999999999987 5789999987666554332     3344333 36788999999999999999999999


Q ss_pred             HHHHHHHHh
Q psy4332         169 TEIHLFLQR  177 (188)
Q Consensus       169 ~el~~~l~~  177 (188)
                      .++...|.+
T Consensus       640 tei~~~lsd  648 (974)
T KOG4257|consen  640 TEIKAILSD  648 (974)
T ss_pred             HHHHHHHHH
Confidence            999554443

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.94  E-value=1.6e-26  Score=169.24  Aligned_cols=153  Identities=31%  Similarity=0.611  Sum_probs=119.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|+++++|+|+||        .||+++.++.++|+|||.+....... .........+..|++||.+.
T Consensus       104 ~~~~~l~~~l~~lH~~~i~h~dl~p--------~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~  174 (256)
T cd05112         104 GMCLDVCEGMAYLESSNVIHRDLAA--------RNCLVGENQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFS  174 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccccccc--------ceEEEcCCCeEEECCCcceeecccCc-ccccCCCccchhhcCHhHhc
Confidence            3556778899999999999999999        99999999999999999876553321 11122333456799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|++++ .|..||...........+....     . .......+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Dv~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~l~~~~l~~~p~~Rp~  247 (256)
T cd05112         175 FSKYSSKSDVWSFGVLMWEVFS-EGKTPYENRSNSEVVETINAGF-----R-LYKPRLASQSVYELMQHCWKERPEDRPS  247 (256)
T ss_pred             cCCcChHHHHHHHHHHHHHHHc-CCCCCCCcCCHHHHHHHHhCCC-----C-CCCCCCCCHHHHHHHHHHcccChhhCCC
Confidence            8888999999999999999995 3678998877666665543221     1 1112335789999999999999999999


Q ss_pred             HHHHHHHHH
Q psy4332         168 FTEIHLFLQ  176 (188)
Q Consensus       168 ~~el~~~l~  176 (188)
                      +.++++.|+
T Consensus       248 ~~~~l~~l~  256 (256)
T cd05112         248 FSLLLHQLA  256 (256)
T ss_pred             HHHHHHhhC
Confidence            999988763

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=5.6e-27  Score=175.08  Aligned_cols=156  Identities=24%  Similarity=0.300  Sum_probs=114.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.++.|+|++||+|+|+||        .||+++. ++.+||+|||++.......  .......+++.|+|||.+
T Consensus       114 ~~~~qi~~~L~~LH~~~i~H~dl~~--------~nil~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~  183 (295)
T cd07837         114 SFMYQLLKGVAHCHKHGVMHRDLKP--------QNLLVDKQKGLLKIADLGLGRAFSIPV--KSYTHEIVTLWYRAPEVL  183 (295)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCh--------HHEEEecCCCeEEEeecccceecCCCc--cccCCcccccCCCChHHh
Confidence            3577889999999999999999999        9999998 8899999999887553221  112233456779999988


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc---------------------ccCCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF---------------------IYLPTP  144 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~  144 (188)
                      .+. .++.++|+||+|+++|+++  +|..||.+.........+..........                     .....+
T Consensus       184 ~~~~~~~~~~Di~slG~~l~~l~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (295)
T cd07837         184 LGSTHYSTPVDIWSVGCIFAEMS--RKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVP  261 (295)
T ss_pred             hCCCCCCchHHHHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhcc
Confidence            653 4688999999999999999  5678888766544433332211100000                     000113


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHH
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFL  175 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l  175 (188)
                      ..+.++.+++.+||..+|++||+++|+  |+||
T Consensus       262 ~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~  294 (295)
T cd07837         262 DLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF  294 (295)
T ss_pred             ccCHHHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence            467889999999999999999999999  6665

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.94  E-value=1.6e-26  Score=170.15  Aligned_cols=155  Identities=18%  Similarity=0.305  Sum_probs=119.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.++|+.||+|+|++|        +||+++.++.++++|||++.......  .......++..|++||.+.
T Consensus       110 ~~~~~l~~~l~~lh~~~i~h~dl~p--------~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~  179 (267)
T cd08224         110 KYFVQLCSALEHMHSKRIMHRDIKP--------ANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCcCh--------hhEEECCCCcEEEeccceeeeccCCC--cccceecCCccccCHHHhc
Confidence            3466788999999999999999999        99999999999999999876653321  1122344677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..++.++|+||+|++++++++  |..||....  .......+..     ......+....+.++.+++.+||..+|++|
T Consensus       180 ~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~cl~~~p~~R  252 (267)
T cd08224         180 ENGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLYSLCKKIEK-----CDYPPLPADHYSEELRDLVSRCINPDPEKR  252 (267)
T ss_pred             cCCCCchhcHHHHHHHHHHHHH--CCCCcccCCccHHHHHhhhhc-----CCCCCCChhhcCHHHHHHHHHHcCCCcccC
Confidence            8888999999999999999995  567875543  2223322221     112222333567899999999999999999


Q ss_pred             CCHHHHHHHHHhcc
Q psy4332         166 PSFTEIHLFLQRKN  179 (188)
Q Consensus       166 ps~~el~~~l~~~~  179 (188)
                      |++.++.+.|+++.
T Consensus       253 p~~~~il~~~~~~~  266 (267)
T cd08224         253 PDISYVLQVAKEMH  266 (267)
T ss_pred             CCHHHHHHHHHHhc
Confidence            99999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=7.2e-27  Score=174.43  Aligned_cols=158  Identities=22%  Similarity=0.311  Sum_probs=118.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++.......  .......++..|++||++.
T Consensus       114 ~~~~ql~~~l~~lH~~~i~H~dlkp--------~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         114 VICRQMLEALQYLHSMKIIHRDLKA--------GNVLLTLDGDIKLADFGVSAKNVKTL--QRRDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             HHHHHHHHHHHHHhcCCeeecCCCc--------ceEEEcCCCCEEEccCccceeccccc--cccceecCCccccCceeec
Confidence            3567888999999999999999999        99999999999999999876543221  1223344677899999985


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                           ...++.++|+||+|+++|+++  +|..||...........+....    ..........+.++.+++.+||..+|
T Consensus       184 ~~~~~~~~~~~~~Dv~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p  257 (292)
T cd06644         184 CETMKDTPYDYKADIWSLGITLIEMA--QIEPPHHELNPMRVLLKIAKSE----PPTLSQPSKWSMEFRDFLKTALDKHP  257 (292)
T ss_pred             cccccCCCCCchhhhHhHHHHHHHHh--cCCCCCccccHHHHHHHHhcCC----CccCCCCcccCHHHHHHHHHHhcCCc
Confidence                 234677899999999999999  5678887766544443332211    11111223457789999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccCC
Q psy4332         163 TERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~~  181 (188)
                      ++||+++++  |+++..+..+
T Consensus       258 ~~Rp~~~~il~~~~~~~~~~~  278 (292)
T cd06644         258 ETRPSAAQLLEHPFVSSVTSN  278 (292)
T ss_pred             ccCcCHHHHhcCccccccccc
Confidence            999999999  7788766543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.94  E-value=5.6e-27  Score=178.21  Aligned_cols=167  Identities=23%  Similarity=0.241  Sum_probs=122.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++||+|+|+||        +||+++.++.+||+|||++..........  ......++..|++||.
T Consensus       111 ~i~~qi~~aL~~LH~~~ivH~dlkp--------~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  182 (334)
T cd07855         111 YFLYQLLRGLKYIHSANVIHRDLKP--------SNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPEL  182 (334)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHH
Confidence            4567899999999999999999999        99999999999999999987654332211  1123356778999999


Q ss_pred             hhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC--------------------CCcccC---
Q psy4332          86 VRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD--------------------GEFIYL---  141 (188)
Q Consensus        86 ~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~---  141 (188)
                      +.+ ..++.++||||+|+++|+++  .|..||.+.+.......+.......                    ......   
T Consensus       183 ~~~~~~~~~~~Di~slG~~l~el~--~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (334)
T cd07855         183 LLSLPEYTTAIDMWSVGCIFAEML--GRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWS  260 (334)
T ss_pred             hcCCcccccccchHHHHHHHHHHH--cCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHH
Confidence            865 35788999999999999999  6778997765443332222111100                    000000   


Q ss_pred             -CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCC
Q psy4332         142 -PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVP  184 (188)
Q Consensus       142 -~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~  184 (188)
                       ..+..+.++.+++.+||+.+|++||+++++  |+||++.......
T Consensus       261 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~  306 (334)
T cd07855         261 KIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDE  306 (334)
T ss_pred             HHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCccc
Confidence             013457889999999999999999999998  8899877665443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG1024|consensus

Probab=99.94  E-value=1e-26  Score=172.47  Aligned_cols=159  Identities=29%  Similarity=0.599  Sum_probs=133.7

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .-.+|.+++.|+.|+|++|++|.||-.        .|+++++..++||+|-.+++......-.........+..||+||.
T Consensus       398 lV~masQla~am~hlh~~~ViHkDiAa--------RNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEa  469 (563)
T KOG1024|consen  398 LVLMASQLAMAMEHLHNHGVIHKDIAA--------RNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEA  469 (563)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccchhhh--------hcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHH
Confidence            345789999999999999999999999        999999999999999999988765432223334556678999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++..+|+||||+++||++| -|..||.+.++.+....+..+..      ...+-++++++..+|.-||+..|++|
T Consensus       470 l~n~~yssasDvWsfGVllWELmt-lg~~PyaeIDPfEm~~ylkdGyR------laQP~NCPDeLf~vMacCWallpeeR  542 (563)
T KOG1024|consen  470 LQNSHYSSASDVWSFGVLLWELMT-LGKLPYAEIDPFEMEHYLKDGYR------LAQPFNCPDELFTVMACCWALLPEER  542 (563)
T ss_pred             HhhhhhcchhhhHHHHHHHHHHHh-cCCCCccccCHHHHHHHHhccce------ecCCCCCcHHHHHHHHHHHhcCcccC
Confidence            999999999999999999999999 47899999999998887765432      22235789999999999999999999


Q ss_pred             CCHHHHHHHHHhcc
Q psy4332         166 PSFTEIHLFLQRKN  179 (188)
Q Consensus       166 ps~~el~~~l~~~~  179 (188)
                      |+++|++.-|.+..
T Consensus       543 Psf~Qlv~cLseF~  556 (563)
T KOG1024|consen  543 PSFSQLVICLSEFH  556 (563)
T ss_pred             CCHHHHHHHHHHHH
Confidence            99999976665543

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=1.1e-26  Score=171.04  Aligned_cols=146  Identities=27%  Similarity=0.372  Sum_probs=109.7

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce-------EEEccCCCCccCCCCccccccCCCCCCcc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE-------IKISDFATDSDMFSSDYYRVHDNTSLPIR   79 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~-------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~   79 (188)
                      ..++.+++.|+.|+|++||+|+|+||        +||+++.++.       ++++|||++......      ....++..
T Consensus       108 ~~i~~qi~~~l~~lH~~~ivH~dlkp--------~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~  173 (262)
T cd05077         108 FKVAKQLASALSYLEDKDLVHGNVCT--------KNILLAREGIDGECGPFIKLSDPGIPITVLSR------QECVERIP  173 (262)
T ss_pred             HHHHHHHHHHHHHhhhCCeECCCCCc--------ccEEEecCCccCCCCceeEeCCCCCCccccCc------cccccccc
Confidence            34678999999999999999999999        9999976553       899999987654322      23345677


Q ss_pred             ccchhhhh-cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          80 WMAWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        80 ~~~Pe~~~-~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      |+|||.+. +..++.++||||||+++|++++ .+..||......+... ....    ...   .....+.++.+++.+||
T Consensus       174 y~aPE~~~~~~~~~~~~DiwslG~~l~el~~-~~~~p~~~~~~~~~~~-~~~~----~~~---~~~~~~~~~~~li~~cl  244 (262)
T cd05077         174 WIAPECVEDSKNLSIAADKWSFGTTLWEICY-NGEIPLKDKTLAEKER-FYEG----QCM---LVTPSCKELADLMTHCM  244 (262)
T ss_pred             ccChhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCcchhHHHH-HHhc----Ccc---CCCCChHHHHHHHHHHc
Confidence            99999986 4568889999999999999975 3567887665433322 1111    011   11223568999999999


Q ss_pred             ccCCCCCCCHHHHHHHH
Q psy4332         159 KRSPTERPSFTEIHLFL  175 (188)
Q Consensus       159 ~~dp~~Rps~~el~~~l  175 (188)
                      ..||++||++.++...|
T Consensus       245 ~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         245 NYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCChhhCcCHHHHHHhc
Confidence            99999999999997665

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.94  E-value=1.8e-26  Score=170.25  Aligned_cols=151  Identities=19%  Similarity=0.335  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|+ +|++|+|++|        .||+++.++.++|+|||.+.......   ......++..|++||.+
T Consensus       117 ~~~~~l~~~l~~lh~~~~i~H~dl~~--------~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~  185 (269)
T cd08528         117 NIFVQMVLALRYLHKEKRIVHRDLTP--------NNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIV  185 (269)
T ss_pred             HHHHHHHHHHHHhccCCceeecCCCH--------HHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhh
Confidence            345688999999995 7899999999        99999999999999999987654332   22344567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+||+|+++|+++  .|..||...........+.....     ........+..+.+++.+||..||++||
T Consensus       186 ~~~~~~~~~Dv~slG~ll~~l~--~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rp  258 (269)
T cd08528         186 KNEPYGEKADVWAFGCILYQMC--TLQPPFYSTNMLSLATKIVEAVY-----EPLPEGMYSEDVTDVITSCLTPDAEARP  258 (269)
T ss_pred             cCCCCchHHHHHHHHHHHHHHH--hCCCcccccCHHHHHHHHhhccC-----CcCCcccCCHHHHHHHHHHCCCCCccCC
Confidence            8888899999999999999999  55789887765555544432211     1222235678999999999999999999


Q ss_pred             CHHHHHHHHH
Q psy4332         167 SFTEIHLFLQ  176 (188)
Q Consensus       167 s~~el~~~l~  176 (188)
                      ++.|+...+.
T Consensus       259 ~~~e~~~~~~  268 (269)
T cd08528         259 DIIQVSAMIS  268 (269)
T ss_pred             CHHHHHHHhc
Confidence            9999987764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=8.8e-27  Score=175.74  Aligned_cols=155  Identities=21%  Similarity=0.276  Sum_probs=120.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-------------------
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-------------------   69 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-------------------   69 (188)
                      ++.+++.++.|+|++|++|+||||        +||+++.++.++|+|||++..........                   
T Consensus       108 ~~~qi~~~l~~lH~~~i~H~dlkp--------~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (316)
T cd05574         108 YAAEVLLALEYLHLLGIVYRDLKP--------ENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSE  179 (316)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCh--------HHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchh
Confidence            456889999999999999999999        99999999999999999876543211000                   


Q ss_pred             --------ccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccC
Q psy4332          70 --------VHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL  141 (188)
Q Consensus        70 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (188)
                              ......++..|++||.+.+..++.++||||+|+++|+++  +|..||.+.........+....     ....
T Consensus       180 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~--~g~~pf~~~~~~~~~~~~~~~~-----~~~~  252 (316)
T cd05574         180 TFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEML--YGTTPFKGSNRDETFSNILKKE-----VTFP  252 (316)
T ss_pred             hhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHh--hCCCCCCCCchHHHHHHHhcCC-----ccCC
Confidence                    011234677899999998888899999999999999999  6788998877665555443211     1111


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCC----HHHH--HHHHHhc
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPS----FTEI--HLFLQRK  178 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps----~~el--~~~l~~~  178 (188)
                      .....+.++.+++.+||..+|++||+    ++++  |+||+..
T Consensus       253 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         253 GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence            12236789999999999999999999    9998  7788765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0580|consensus

Probab=99.94  E-value=1.2e-26  Score=161.84  Aligned_cols=148  Identities=25%  Similarity=0.348  Sum_probs=127.1

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      -.+++.|+.|+|.++++|||+||        +|+|++..+..|++|||-+.... .   +.....+||.-|++||...+.
T Consensus       130 i~q~A~Al~y~h~k~VIhRdiKp--------enlLlg~~~~lkiAdfGwsV~~p-~---~kR~tlcgt~dyl~pEmv~~~  197 (281)
T KOG0580|consen  130 IKQLANALLYCHLKRVIHRDIKP--------ENLLLGSAGELKIADFGWSVHAP-S---NKRKTLCGTLDYLPPEMVEGR  197 (281)
T ss_pred             HHHHHHHHHHhccCCcccCCCCH--------HHhccCCCCCeeccCCCceeecC-C---CCceeeecccccCCHhhcCCC
Confidence            35788999999999999999999        99999999999999999865443 2   244577899999999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHH
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFT  169 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  169 (188)
                      ..+..+|+|++|++.||++  -|..||.+....+...++.......       ...++.++.++|.+|+..+|.+|.+..
T Consensus       198 ~hd~~Vd~w~lgvl~yefl--vg~ppFes~~~~etYkrI~k~~~~~-------p~~is~~a~dlI~~ll~~~p~~r~~l~  268 (281)
T KOG0580|consen  198 GHDKFVDLWSLGVLCYEFL--VGLPPFESQSHSETYKRIRKVDLKF-------PSTISGGAADLISRLLVKNPIERLALT  268 (281)
T ss_pred             CccchhhHHHHHHHHHHHH--hcCCchhhhhhHHHHHHHHHccccC-------CcccChhHHHHHHHHhccCccccccHH
Confidence            9999999999999999999  6789999988778888776543211       256788999999999999999999999


Q ss_pred             HH--HHHHHhc
Q psy4332         170 EI--HLFLQRK  178 (188)
Q Consensus       170 el--~~~l~~~  178 (188)
                      |+  |+|+...
T Consensus       269 ~v~~hpwI~a~  279 (281)
T KOG0580|consen  269 EVMDHPWIVAN  279 (281)
T ss_pred             HHhhhHHHHhc
Confidence            99  8888754

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.94  E-value=1e-26  Score=176.91  Aligned_cols=164  Identities=21%  Similarity=0.254  Sum_probs=120.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc---cccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY---RVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.+||+|||++.........   .......++..|++||
T Consensus       111 ~i~~qi~~~L~~LH~~~i~H~dl~p--------~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  182 (337)
T cd07852         111 YIMYQLLKALKYIHSGNVIHRDLKP--------SNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE  182 (337)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCce
Confidence            3577889999999999999999999        9999999999999999988766433211   1112334677899999


Q ss_pred             hhhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC------------------------CCCcc
Q psy4332          85 SVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD------------------------DGEFI  139 (188)
Q Consensus        85 ~~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~------------------------~~~~~  139 (188)
                      .+.+ ..++.++|+||+|+++++++  +|..||.+........++......                        .....
T Consensus       183 ~~~~~~~~~~~sDi~slG~~l~el~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (337)
T cd07852         183 ILLGSTRYTKGVDMWSVGCILGEML--LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPL  260 (337)
T ss_pred             eeeccccccccchHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccch
Confidence            8764 34788999999999999999  557888766544433332211100                        00000


Q ss_pred             cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ....+..+.++.+++.+||+.+|++||++.++  ++|+++....
T Consensus       261 ~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~  304 (337)
T cd07852         261 DELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP  304 (337)
T ss_pred             hhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence            11123357889999999999999999999999  7889877554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=8e-27  Score=174.04  Aligned_cols=151  Identities=21%  Similarity=0.315  Sum_probs=114.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.++|++||+|+|+||        +||+++.++.++|+|||++........  ......++..|++||.+..
T Consensus       133 ~~~qi~~al~~lH~~~ivH~dlkp--------~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~  202 (291)
T cd06639         133 ILYGALLGLQHLHNNRIIHRDVKG--------NNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIAC  202 (291)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCH--------HHEEEcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcC
Confidence            567788999999999999999999        999999999999999999776543221  1123456778999999854


Q ss_pred             C-----CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 R-----KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 ~-----~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .     .++.++|+||+|+++++++  .|..||...........+....   ... .......+..+.+++.+||..+|+
T Consensus       203 ~~~~~~~~~~~~Di~slGvi~~el~--~g~~p~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~l~~li~~~l~~~p~  276 (291)
T cd06639         203 EQQYDYSYDARCDVWSLGITAIELG--DGDPPLFDMHPVKTLFKIPRNP---PPT-LLHPEKWCRSFNHFISQCLIKDFE  276 (291)
T ss_pred             CCCcccccCCccchHHHHHHHHHHh--hCCCCCCCCcHHHHHHHHhcCC---CCC-CCcccccCHHHHHHHHHHhhcChh
Confidence            3     2578999999999999999  5678988776544443332211   111 111234567899999999999999


Q ss_pred             CCCCHHHH--HHHH
Q psy4332         164 ERPSFTEI--HLFL  175 (188)
Q Consensus       164 ~Rps~~el--~~~l  175 (188)
                      +||++.++  |+||
T Consensus       277 ~Rps~~~il~~~~~  290 (291)
T cd06639         277 ARPSVTHLLEHPFI  290 (291)
T ss_pred             hCcCHHHHhcCccc
Confidence            99999998  5665

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=1.7e-26  Score=171.73  Aligned_cols=160  Identities=28%  Similarity=0.440  Sum_probs=113.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+|+||        +||+++.++.++|+|||++.......... ......++..|++||.+
T Consensus       112 ~~~~~l~~aL~~LH~~~i~H~dlkp--------~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  183 (284)
T cd05081         112 LYASQICKGMEYLGSKRYVHRDLAT--------RNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESL  183 (284)
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCH--------hhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHh
Confidence            3567889999999999999999999        99999999999999999987664332211 11122234469999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccC-----------CCCCcccCCCCCChHHHHHHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-----------DDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      .+..++.++|+||+|++++|++++.  .++..... ...........           .............+.++.+++.
T Consensus       184 ~~~~~~~~~Di~slG~~l~el~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  260 (284)
T cd05081         184 TESKFSVASDVWSFGVVLYELFTYS--DKSCSPPA-EFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMK  260 (284)
T ss_pred             ccCCcChHHHHHHHHHHHHHHhhcC--CcCCCcch-hhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHH
Confidence            8888899999999999999999643  33322211 11111000000           0000111223456789999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhc
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      +||..+|++|||+.++...|+.+
T Consensus       261 ~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         261 ECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHccCChhhCCCHHHHHHHHHhc
Confidence            99999999999999999988865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1e-26  Score=177.38  Aligned_cols=157  Identities=20%  Similarity=0.253  Sum_probs=118.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+|+||        .||+++.++.++|+|||++......     .....++..|+|||.+.+
T Consensus       122 ~~~qi~~aL~~LH~~~i~H~dlkp--------~NIll~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         122 LVYQMLCGLKYIHSAGIIHRDLKP--------GNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEeeCCCCcCCCCC-----CCCceeeecccChhhhcC
Confidence            567888999999999999999999        9999999999999999997654321     123345677999999875


Q ss_pred             -CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC------------------------CcccCCC
Q psy4332          89 -RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG------------------------EFIYLPT  143 (188)
Q Consensus        89 -~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~  143 (188)
                       ..++.++|+||+|+++++++  .|..||.+.........+........                        .......
T Consensus       189 ~~~~~~~~Dv~slGvil~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (342)
T cd07879         189 WMHYNQTVDIWSVGCIMAEML--TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLF  266 (342)
T ss_pred             ccccCchHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHh
Confidence             35788999999999999999  56789987665444333322111000                        0000001


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      +..+.++.+++.+||+.||++||+++++  |+||+....
T Consensus       267 ~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         267 PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            2356788999999999999999999999  789988754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=1.3e-26  Score=173.40  Aligned_cols=165  Identities=20%  Similarity=0.205  Sum_probs=120.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++........  ......++..|+|||.+
T Consensus       105 ~~~~~qi~~al~~lH~~~i~H~dl~p--------~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~  174 (298)
T cd07841         105 KSYMLMTLRGLEYLHSNWILHRDLKP--------NNLLIASDGVLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELL  174 (298)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecCCCh--------hhEEEcCCCCEEEccceeeeeccCCCc--cccccccceeeeCHHHH
Confidence            34678899999999999999999999        999999999999999999876644321  12233456779999998


Q ss_pred             hc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC---------------------cccCCCC
Q psy4332          87 RL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE---------------------FIYLPTP  144 (188)
Q Consensus        87 ~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~  144 (188)
                      .+ ..++.++|+||+|++++++++  |..+|.+....+...++.........                     .......
T Consensus       175 ~~~~~~~~~~Dv~slG~il~e~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (298)
T cd07841         175 FGARHYGVGVDMWSVGCIFAELLL--RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFP  252 (298)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHc--CCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcc
Confidence            64 346889999999999999994  56677666544433333211100000                     0000012


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCC
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYV  183 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~  183 (188)
                      ..+..+.+++.+||..+|++||+++|+  ++||++......
T Consensus       253 ~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~  293 (298)
T cd07841         253 AASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP  293 (298)
T ss_pred             cccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence            346789999999999999999999999  788987655544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=1.7e-26  Score=169.27  Aligned_cols=146  Identities=29%  Similarity=0.402  Sum_probs=111.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-------eEEEccCCCCccCCCCccccccCCCCCCcc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-------EIKISDFATDSDMFSSDYYRVHDNTSLPIR   79 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~   79 (188)
                      ..++.+++.++.|+|++||+|+||||        .||+++.++       .+|++|||++......      ....++..
T Consensus       104 ~~~~~~i~~~l~~LH~~~i~H~dlkp--------~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~  169 (259)
T cd05037         104 LDVAKQLASALHYLEDKKLVHGNVCG--------KNILVARYGLNEGYVPFIKLSDPGIPITVLSR------EERVERIP  169 (259)
T ss_pred             HHHHHHHHHHHHHHhhCCeecccCcc--------ceEEEecCccccCCceeEEeCCCCcccccccc------cccccCCC
Confidence            34567999999999999999999999        999999887       7999999998765431      22334567


Q ss_pred             ccchhhhhcC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHH
Q psy4332          80 WMAWESVRLR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        80 ~~~Pe~~~~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  157 (188)
                      |++||++.+.  ..+.++|+||+|+++++++++ +..||......+.......     ......   ....++.+++.+|
T Consensus       170 y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~-~~~p~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~li~~~  240 (259)
T cd05037         170 WIAPECIRNGQASLTIAADKWSFGTTLLEICSN-GEEPLSTLSSSEKERFYQD-----QHRLPM---PDCAELANLINQC  240 (259)
T ss_pred             ccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC-CCCCcccCCchhHHHHHhc-----CCCCCC---CCchHHHHHHHHH
Confidence            9999999866  688899999999999999964 5778877653333322221     111111   1126899999999


Q ss_pred             hccCCCCCCCHHHHHHHH
Q psy4332         158 WKRSPTERPSFTEIHLFL  175 (188)
Q Consensus       158 l~~dp~~Rps~~el~~~l  175 (188)
                      |..+|.+||++.++.+.|
T Consensus       241 l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         241 WTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             hccChhhCCCHHHHHHhc
Confidence            999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG4279|consensus

Probab=99.94  E-value=1.3e-27  Score=188.10  Aligned_cols=159  Identities=21%  Similarity=0.344  Sum_probs=124.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..++|+.|+.|||++.|+|||||.        +|||++. .|.+||+|||.+++..-.+  .......||.-|||||++-
T Consensus       680 YtkQILeGLkYLHen~IVHRDIKG--------DNVLvNTySGvlKISDFGTsKRLAgin--P~TETFTGTLQYMAPEvID  749 (1226)
T KOG4279|consen  680 YTKQILEGLKYLHENKIVHRDIKG--------DNVLVNTYSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEVID  749 (1226)
T ss_pred             HHHHHHHHhhhhhhcceeeccccC--------CcEEEeeccceEEecccccchhhccCC--ccccccccchhhhChHhhc
Confidence            357899999999999999999999        9999985 4889999999999885443  3567788999999999998


Q ss_pred             cC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 LR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+  .+...+|||||||.+.||.  +|.+||-.....+ ..-++.-     -+..+.-+...+.+..+||.+|+++||.+
T Consensus       750 qG~RGYG~aADIWS~GCT~vEMA--TGrPPF~ElgspqAAMFkVGm-----yKvHP~iPeelsaeak~FilrcFepd~~~  822 (1226)
T KOG4279|consen  750 QGPRGYGKAADIWSFGCTMVEMA--TGRPPFVELGSPQAAMFKVGM-----YKVHPPIPEELSAEAKNFILRCFEPDPCD  822 (1226)
T ss_pred             cCCcCCCchhhhhhccceeEeec--cCCCCeeecCChhHhhhhhcc-----eecCCCCcHHHHHHHHHHHHHHcCCCccc
Confidence            65  4788999999999999999  6789998775332 2222211     11112223456888999999999999999


Q ss_pred             CCCHHHHH--HHHHhccCCCCC
Q psy4332         165 RPSFTEIH--LFLQRKNLGYVP  184 (188)
Q Consensus       165 Rps~~el~--~~l~~~~~~~~~  184 (188)
                      ||++++++  +||+.-+....|
T Consensus       823 R~sA~~LL~DpFlq~~~kk~r~  844 (1226)
T KOG4279|consen  823 RPSAKDLLQDPFLQHNNKKPRP  844 (1226)
T ss_pred             CccHHHhccCcccccCCCCCCC
Confidence            99999994  678766443333

>KOG1989|consensus

Probab=99.94  E-value=5e-27  Score=188.02  Aligned_cols=155  Identities=19%  Similarity=0.267  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc------ccc-CCCCCCc
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY------RVH-DNTSLPI   78 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~-~~~~~~~   78 (188)
                      ++..+++.|+.++|...  |||||||-        +|||++.+|..||||||.+.........      ... -...-|+
T Consensus       148 kIf~dv~~AVa~mH~~~pPiIHRDLKi--------ENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp  219 (738)
T KOG1989|consen  148 KIFYDVCEAVAAMHYLKPPIIHRDLKI--------ENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP  219 (738)
T ss_pred             HHHHHHHHHHHHHhcCCCccchhhhhh--------hheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence            35567888999999766  99999999        9999999999999999987654332210      011 1233467


Q ss_pred             cccchhhhh---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          79 RWMAWESVR---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        79 ~~~~Pe~~~---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      -|++||.+.   +...+.|+|||+|||++|.|+  ....||.+.....+.    +     +....++.+..+..+.+||+
T Consensus       220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC--y~t~PFe~sg~laIl----n-----g~Y~~P~~p~ys~~l~~LI~  288 (738)
T KOG1989|consen  220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC--YFTTPFEESGKLAIL----N-----GNYSFPPFPNYSDRLKDLIR  288 (738)
T ss_pred             cccChHHHhhhcCCCCcchhHHHHHHHHHHHHH--HhCCCcCcCcceeEE----e-----ccccCCCCccHHHHHHHHHH
Confidence            899999985   456899999999999999999  677899886433322    2     22233344688999999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      .||+.||++||++.++...+.++...
T Consensus       289 ~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  289 TMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             HHhccCcccCCCHHHHHHHHHHHhcC
Confidence            99999999999999998887777543

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.5e-26  Score=171.62  Aligned_cols=156  Identities=24%  Similarity=0.353  Sum_probs=120.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|++||+|+|+||        +||+++.++.++|+|||++........  ......++..|++||.+
T Consensus       106 ~~~~~ql~~~l~~lh~~~i~h~dl~p--------~nili~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~  175 (280)
T cd06611         106 RYVCRQMLEALNFLHSHKVIHRDLKA--------GNILLTLDGDVKLADFGVSAKNKSTLQ--KRDTFIGTPYWMAPEVV  175 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCh--------hhEEECCCCCEEEccCccchhhccccc--ccceeecchhhcCHHHH
Confidence            34678899999999999999999999        999999999999999998765533221  12234467789999998


Q ss_pred             hc-----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 RL-----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~~-----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      ..     ..++.++|+||+|+++|+++  .|..||.+.........+....    .........++.++.+++.+||..+
T Consensus       176 ~~~~~~~~~~~~~sDi~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~  249 (280)
T cd06611         176 ACETFKDNPYDYKADIWSLGITLIELA--QMEPPHHELNPMRVLLKILKSE----PPTLDQPSKWSSSFNDFLKSCLVKD  249 (280)
T ss_pred             hhcccCCCCCCccccHHHHHHHHHHHH--hCCCCcccCCHHHHHHHHhcCC----CCCcCCcccCCHHHHHHHHHHhccC
Confidence            52     34677899999999999999  5678998876655544443211    1111122356789999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhc
Q psy4332         162 PTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~  178 (188)
                      |++||+++++  |+|+.+.
T Consensus       250 p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         250 PDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             hhhCcCHHHHhcChhhccc
Confidence            9999999999  7888765

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.6e-26  Score=169.73  Aligned_cols=153  Identities=21%  Similarity=0.278  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++++|+|++|        .||+++.++.++|+|||++.....      .....++..|++||.+.
T Consensus       101 ~i~~qi~~aL~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~  166 (260)
T cd05611         101 QYIAEVVLGVEDLHQRGIIHRDIKP--------ENLLIDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETIL  166 (260)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHeEECCCCcEEEeecccceeccc------cccCCCCcCccChhhhc
Confidence            4567889999999999999999999        999999999999999998765432      12334667799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++||||+|+++|+++  .|..||...........+......   ........++.++.+++.+||..+|++||+
T Consensus       167 ~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  241 (260)
T cd05611         167 GVGDDKMSDWWSLGCVIFEFL--FGYPPFHAETPDAVFDNILSRRIN---WPEEVKEFCSPEAVDLINRLLCMDPAKRLG  241 (260)
T ss_pred             CCCCcchhhhHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhcccC---CCCcccccCCHHHHHHHHHHccCCHHHccC
Confidence            777889999999999999999  567899887766666555432211   111122356789999999999999999996


Q ss_pred             H---HHH--HHHHHhcc
Q psy4332         168 F---TEI--HLFLQRKN  179 (188)
Q Consensus       168 ~---~el--~~~l~~~~  179 (188)
                      +   +|+  |+||++++
T Consensus       242 ~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         242 ANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             CCcHHHHHcChHhhcCC
Confidence            5   576  78887654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0671|consensus

Probab=99.94  E-value=4.7e-28  Score=178.46  Aligned_cols=167  Identities=20%  Similarity=0.229  Sum_probs=121.0

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEE------------cCcceEEEccCCCCccCCCCccccccCC
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV------------GKKFEIKISDFATDSDMFSSDYYRVHDN   73 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~   73 (188)
                      .+.++.|++.++.+||+.+++|.|+||.||++.+++.+..            ..+..+++.|||.+......     +..
T Consensus       194 ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~  268 (415)
T KOG0671|consen  194 IRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HST  268 (415)
T ss_pred             HHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC-----cce
Confidence            3567889999999999999999999998888776654422            12345899999997655332     245


Q ss_pred             CCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc--------------
Q psy4332          74 TSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI--------------  139 (188)
Q Consensus        74 ~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------  139 (188)
                      ...|..|.|||++.+.+|+..+||||+||+++|++  .|..-|+..+..+-..+.....+..+...              
T Consensus       269 iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely--tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~r  346 (415)
T KOG0671|consen  269 IVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY--TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGR  346 (415)
T ss_pred             eeeccccCCchheeccCcCCccCceeeeeEEEEee--ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhccc
Confidence            55778899999999999999999999999999999  55677776654442222211111110000              


Q ss_pred             -c------------------------CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         140 -Y------------------------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       140 -~------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                       .                        ........++.+|+++||..||.+|+|+.|+  |+||....
T Consensus       347 ldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  347 LDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             ccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence             0                        0011124569999999999999999999999  89998764

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=3.4e-26  Score=169.25  Aligned_cols=154  Identities=33%  Similarity=0.604  Sum_probs=119.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|+++|+|+|+||        +||+++.++.++++|||++....... ........++..|++||.+.
T Consensus       121 ~~~~~l~~~l~~LH~~~i~H~dlkp--------~Nili~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~  191 (275)
T cd05046         121 ALCTQIALGMDHLSNARFVHRDLAA--------RNCLVSSQREVKVSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQ  191 (275)
T ss_pred             HHHHHHHHHHHHhhhcCcccCcCcc--------ceEEEeCCCcEEEcccccccccCccc-ccccCCceeEEeecChhhhc
Confidence            3567889999999999999999999        99999999999999999876543221 11222334566799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++||||+|++++++++ .+..||.................     .......++..+.+++.+||..+|++||+
T Consensus       192 ~~~~~~~~Di~slG~~l~~l~~-~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~  265 (275)
T cd05046         192 EDDFSTKSDVWSFGVLMWEVFT-QGELPFYGLSDEEVLNRLQAGKL-----ELPVPEGCPSRLYKLMTRCWAVNPKDRPS  265 (275)
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCCccccchHHHHHHHHcCCc-----CCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence            8888899999999999999996 36789987665555554432211     11122456789999999999999999999


Q ss_pred             HHHHHHHHH
Q psy4332         168 FTEIHLFLQ  176 (188)
Q Consensus       168 ~~el~~~l~  176 (188)
                      +.++...|+
T Consensus       266 ~~~~l~~l~  274 (275)
T cd05046         266 FSELVSALG  274 (275)
T ss_pred             HHHHHHHhc
Confidence            999988775

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=4.5e-27  Score=172.94  Aligned_cols=152  Identities=27%  Similarity=0.421  Sum_probs=116.9

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|+ .|++|+|+||        +||+++.++.++|+|||.+........    ....++..|++||.+
T Consensus       104 ~~~~~l~~~l~~lH~~~~i~H~dl~~--------~ni~~~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~  171 (265)
T cd06605         104 KIAVAVLKGLTYLHEKHKIIHRDVKP--------SNILVNSRGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERI  171 (265)
T ss_pred             HHHHHHHHHHHHHcCCCCeecCCCCH--------HHEEECCCCCEEEeecccchhhHHHHh----hcccCChhccCHHHH
Confidence            456788899999999 9999999999        999999999999999998765532211    125567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-----HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-----DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      .+..++.++|+||+|+++++++  +|..||....     ..+....+...     .....+....+.++.+++.+||..+
T Consensus       172 ~~~~~~~~~Dv~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         172 QGNDYSVKSDIWSLGLSLIELA--TGRFPYPPENDPPDGIFELLQYIVNE-----PPPRLPSGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             cCCCCCchhhHHHHHHHHHHHH--hCCCCCCccccccccHHHHHHHHhcC-----CCCCCChhhcCHHHHHHHHHHcCCC
Confidence            8888899999999999999999  5677886542     22222222211     1111222226788999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhc
Q psy4332         162 PTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~  178 (188)
                      |++||++.++  ++||++-
T Consensus       245 p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         245 PRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             chhCcCHHHHhhCchhhcc
Confidence            9999999999  7888753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2e-26  Score=171.70  Aligned_cols=160  Identities=21%  Similarity=0.321  Sum_probs=118.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+.|++|+|++|        +||+++.++.++|+|||++.......    .....++..|++||.+.
T Consensus       109 ~i~~~i~~~L~~lH~~~i~H~dl~~--------~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~  176 (287)
T cd06621         109 KIAESVLKGLSYLHSRKIIHRDIKP--------SNILLTRKGQVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQ  176 (287)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEEecCCeEEEeeccccccccccc----cccccCCccccCHHHhc
Confidence            4677899999999999999999999        99999999999999999976554322    12334567799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-----CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-----TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      +..++.++|+|++|+++|+++  .|..||...     ...+....+..................++++.+++.+||..+|
T Consensus       177 ~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  254 (287)
T cd06621         177 GKPYSITSDVWSLGLTLLEVA--QNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDP  254 (287)
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCc
Confidence            888899999999999999999  567788754     2233333332211111111111112346789999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccCC
Q psy4332         163 TERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~~  181 (188)
                      ++||++.|+  ++|+++....
T Consensus       255 ~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         255 TRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             ccCCCHHHHHhCccccccccc
Confidence            999999999  6788665443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=8.8e-27  Score=171.71  Aligned_cols=152  Identities=16%  Similarity=0.209  Sum_probs=111.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++.......  .......++..|++||.+.
T Consensus       110 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         110 YVCRETLQGLAYLHSKGKMHRDIKG--------ANILLTDNGDVKLADFGVAAKITATI--AKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCH--------HHEEECCCCCEEECcCccceeecccc--cccCccccCccccCHhHcc
Confidence            3567889999999999999999999        99999999999999999987664322  1123345677899999985


Q ss_pred             ---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 ---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                         ...++.++|+||+|+++++++  ++..||....+.+....+.......  .........+..+.+++.+||..+|++
T Consensus       180 ~~~~~~~~~~~Dvws~G~il~el~--~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~  255 (267)
T cd06646         180 VEKNGGYNQLCDIWAVGITAIELA--ELQPPMFDLHPMRALFLMSKSNFQP--PKLKDKTKWSSTFHNFVKISLTKNPKK  255 (267)
T ss_pred             cccCCCCcchhhHHHHHHHHHHHH--hCCCCccccchhhhheeeecCCCCC--CCCccccccCHHHHHHHHHHhhCChhh
Confidence               334678999999999999999  4567876554333222111111000  011112345789999999999999999


Q ss_pred             CCCHHHHHH
Q psy4332         165 RPSFTEIHL  173 (188)
Q Consensus       165 Rps~~el~~  173 (188)
                      ||++++++.
T Consensus       256 Rp~~~~il~  264 (267)
T cd06646         256 RPTAERLLT  264 (267)
T ss_pred             CcCHHHHhc
Confidence            999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.94  E-value=1.2e-26  Score=170.92  Aligned_cols=151  Identities=15%  Similarity=0.217  Sum_probs=111.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++.......  .......++..|+|||.+.
T Consensus       110 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         110 YVSRETLQGLYYLHSKGKMHRDIKG--------ANILLTDNGHVKLADFGVSAQITATI--AKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCCEEECcceeeeEccCcc--cccccccCcccccChhhhc
Confidence            4567889999999999999999999        99999999999999999876553221  1223445778899999974


Q ss_pred             ---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 ---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                         ...++.++|+||+|+++|+++  .+..||....+...............  .......++..+.+++.+||..+|++
T Consensus       180 ~~~~~~~~~~~DvwSlG~il~~l~--~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~  255 (267)
T cd06645         180 VERKGGYNQLCDIWAVGITAIELA--ELQPPMFDLHPMRALFLMTKSNFQPP--KLKDKMKWSNSFHHFVKMALTKNPKK  255 (267)
T ss_pred             cccCCCCCchhhhHHHHHHHHHHh--cCCCCcccccchhhHHhhhccCCCCC--cccccCCCCHHHHHHHHHHccCCchh
Confidence               345788999999999999999  55678766544333322221111111  11111245678999999999999999


Q ss_pred             CCCHHHHH
Q psy4332         165 RPSFTEIH  172 (188)
Q Consensus       165 Rps~~el~  172 (188)
                      ||+++++.
T Consensus       256 R~~~~~ll  263 (267)
T cd06645         256 RPTAEKLL  263 (267)
T ss_pred             CcCHHHHh
Confidence            99999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=1.1e-26  Score=172.40  Aligned_cols=152  Identities=20%  Similarity=0.334  Sum_probs=112.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ...+.+++.++.|+|++|++|+|+||        +||+++. +.+||+|||++.........   ....++..|++||.+
T Consensus       103 ~~~~~qi~~~L~~LH~~~i~H~dl~p--------~ni~l~~-~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~  170 (282)
T cd07831         103 KSYMYQLLKSLDHMHRNGIFHRDIKP--------ENILIKD-DILKLADFGSCRGIYSKPPY---TEYISTRWYRAPECL  170 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCceecccCH--------HHEEEcC-CCeEEEecccccccccCCCc---CCCCCCcccCChhHh
Confidence            34667889999999999999999999        9999999 99999999998766433221   223467789999987


Q ss_pred             hc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-------------ccc---------CCC
Q psy4332          87 RL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-------------FIY---------LPT  143 (188)
Q Consensus        87 ~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------~~~---------~~~  143 (188)
                      .. ...+.++|+||+|+++++++  .+..||.+.+..+....+.........             ...         ...
T Consensus       171 ~~~~~~~~~~Di~slGv~l~el~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (282)
T cd07831         171 LTDGYYGPKMDIWAVGCVFFEIL--SLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLL  248 (282)
T ss_pred             hcCCCCCcchhHHHHHHHHHHHH--cCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHc
Confidence            54 44688999999999999999  567899877655544333221111000             000         001


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ...+.++.+++.+||..+|++||+++++.
T Consensus       249 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l  277 (282)
T cd07831         249 PNASAEGLDLLKKLLAYDPDERITAKQAL  277 (282)
T ss_pred             ccccHHHHHHHHHHhccCcccccCHHHHh
Confidence            24578999999999999999999999983

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=1.8e-26  Score=169.87  Aligned_cols=149  Identities=21%  Similarity=0.299  Sum_probs=114.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc----cccccCCCCCCccccchh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD----YYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~Pe   84 (188)
                      .+.+++.++.++|+.+|+|+|++|        .||+++.++.++|+|||++.......    .........++..|++||
T Consensus       107 ~~~qi~~~l~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  178 (265)
T cd06631         107 YTKQILDGVAYLHNNCVVHRDIKG--------NNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE  178 (265)
T ss_pred             HHHHHHHHHHHHHhCCcccCCcCH--------HhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChh
Confidence            456888999999999999999999        99999999999999999876543211    111122345677899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+...+.++|+||+|+++++++  .|..||...........+....    ..........+.++.+++++||..+|++
T Consensus       179 ~~~~~~~~~~~Dv~slG~~~~~l~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~  252 (265)
T cd06631         179 VINESGYGRKSDIWSIGCTVFEMA--TGKPPLASMDRLAAMFYIGAHR----GLMPRLPDSFSAAAIDFVTSCLTRDQHE  252 (265)
T ss_pred             hhcCCCCcchhhHHHHHHHHHHHH--hCCCccccCChHHHHHHhhhcc----CCCCCCCCCCCHHHHHHHHHHhcCCccc
Confidence            998888889999999999999999  5678998765444333322111    1111123456789999999999999999


Q ss_pred             CCCHHHH
Q psy4332         165 RPSFTEI  171 (188)
Q Consensus       165 Rps~~el  171 (188)
                      ||++.++
T Consensus       253 Rp~~~~~  259 (265)
T cd06631         253 RPSALQL  259 (265)
T ss_pred             CCCHHHH
Confidence            9999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-26  Score=171.33  Aligned_cols=148  Identities=23%  Similarity=0.311  Sum_probs=112.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++|++|+|++|        +||+++.++.++|+|||++.......  .......++..|+|||.+..
T Consensus       118 ~~~ql~~al~~lH~~~i~H~~l~p--------~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  187 (275)
T cd06608         118 ILRETLRGLAYLHENKVIHRDIKG--------QNILLTKNAEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIAC  187 (275)
T ss_pred             HHHHHHHHHHHHhcCCcccCCCCH--------HHEEEccCCeEEECCCccceecccch--hhhcCccccccccCHhHhcc
Confidence            566889999999999999999999        99999999999999999876553322  12233457778999998753


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           ..++.++||||+|+++++++  +|..||...........+....    ..........+.++.+++.+||..||+
T Consensus       188 ~~~~~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~dp~  261 (275)
T cd06608         188 DEQPDASYDARSDVWSLGITAIELA--DGKPPLCDMHPMRALFKIPRNP----PPTLKSPENWSKKFNDFISECLIKNYE  261 (275)
T ss_pred             cccccCCccccccHHHhHHHHHHHH--hCCCCccccchHHHHHHhhccC----CCCCCchhhcCHHHHHHHHHHhhcChh
Confidence                 23677899999999999999  5678988765544444433211    111111123577899999999999999


Q ss_pred             CCCCHHHHH
Q psy4332         164 ERPSFTEIH  172 (188)
Q Consensus       164 ~Rps~~el~  172 (188)
                      +|||+.+++
T Consensus       262 ~Rpt~~~ll  270 (275)
T cd06608         262 QRPFMEELL  270 (275)
T ss_pred             hCcCHHHHh
Confidence            999999983

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.94  E-value=9e-27  Score=172.99  Aligned_cols=151  Identities=17%  Similarity=0.243  Sum_probs=114.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+|+||        +||+++.++.++++|||++.......    .....++..|++||.+.
T Consensus       101 ~i~~qi~~al~~lH~~~ivH~dikp--------~Nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~  168 (279)
T cd05633         101 FYATEIILGLEHMHNRFVVYRDLKP--------ANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQ  168 (279)
T ss_pred             HHHHHHHHHHHHHHHCCcCCCCCCH--------HHEEECCCCCEEEccCCcceeccccC----ccCcCCCcCccCHHHhc
Confidence            3567889999999999999999999        99999999999999999986553321    12345788899999986


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH--HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL--EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      . ..++.++|+||+|+++++++  .|..||......  .......   ..   .........+.++.+++.+||..||++
T Consensus       169 ~~~~~~~~~Di~slG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~li~~~l~~~p~~  240 (279)
T cd05633         169 KGTAYDSSADWFSLGCMLFKLL--RGHSPFRQHKTKDKHEIDRMT---LT---VNVELPDSFSPELKSLLEGLLQRDVSK  240 (279)
T ss_pred             CCCCCCchhhhHHHHHHHHHHH--hCCCCcCCCCCcCHHHHHHHh---hc---CCcCCccccCHHHHHHHHHHhcCCHHH
Confidence            4 45788999999999999999  567888754321  1111111   10   011122446789999999999999999


Q ss_pred             CC-----CHHHH--HHHHHhc
Q psy4332         165 RP-----SFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rp-----s~~el--~~~l~~~  178 (188)
                      |+     +++++  |+|++.+
T Consensus       241 R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         241 RLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             hcCCCCCCHHHHHhCccccCC
Confidence            99     59999  6677653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.94  E-value=5.9e-27  Score=178.00  Aligned_cols=157  Identities=15%  Similarity=0.216  Sum_probs=118.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+||||||        +||+++.++.+||+|||++........ .......|++.|+|||++..
T Consensus       107 ~~~qi~~al~~lH~~~iiHrDlkp--------~Nili~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~  177 (332)
T cd05623         107 YLAEMVIAIDSVHQLHYVHRDIKP--------DNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQA  177 (332)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCH--------HHEEECCCCCEEEeecchheecccCCc-ceecccccCccccCHHHHhc
Confidence            456888999999999999999999        999999999999999999876543221 12233468889999999862


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           ..++.++||||+|+++|+++  .|..||......+....+.......  .........+.++.+++.+|+..+++
T Consensus       178 ~~~~~~~~~~~~DvwSlGvil~ell--~g~~Pf~~~~~~~~~~~i~~~~~~~--~~p~~~~~~s~~~~~li~~ll~~~~~  253 (332)
T cd05623         178 MEDGKGKYGPECDWWSLGVCMYEML--YGETPFYAESLVETYGKIMNHKERF--QFPAQVTDVSEDAKDLIRRLICSREH  253 (332)
T ss_pred             cccCCCCCCCcCCEEeeHHHHHHHh--cCCCCCCCCCHHHHHHHHhCCCccc--cCCCccccCCHHHHHHHHHHccChhh
Confidence                 35788999999999999999  6789999887767666654322111  11111234688999999999965444


Q ss_pred             C--CCCHHHH--HHHHHhc
Q psy4332         164 E--RPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~--Rps~~el--~~~l~~~  178 (188)
                      +  |++++++  |+||+.+
T Consensus       254 r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         254 RLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             hcCCCCHHHHhCCCCcCCC
Confidence            4  7899999  7777654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3e-26  Score=169.75  Aligned_cols=154  Identities=23%  Similarity=0.356  Sum_probs=118.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+.||+|+|++|        +||+++.++.++++|||++........  ......++..|++||.+.+
T Consensus       106 i~~~i~~~l~~lh~~~i~H~dl~p--------~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917         106 IIREVLVALKYIHKVGVIHRDIKA--------ANILVTNTGNVKLCDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             HHHHHHHHHHHHHhCCcccCCcCH--------HHEEEcCCCCEEEccCCceeecCCCcc--ccccccCCcceeCHHHhcc
Confidence            456788999999999999999999        999999999999999999876644321  1233457778999999865


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      + .++.++|+||+|+++|+++  .|..||.+.........+...     ..........+.++.+++.+||..||++||+
T Consensus       176 ~~~~~~~~Dv~slG~~l~~ll--~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  248 (277)
T cd06917         176 GKYYDTKADIWSLGITIYEMA--TGNPPYSDVDAFRAMMLIPKS-----KPPRLEDNGYSKLLREFVAACLDEEPKERLS  248 (277)
T ss_pred             CCccccchhHHHHHHHHHHHH--hCCCCCCCCChhhhhhccccC-----CCCCCCcccCCHHHHHHHHHHcCCCcccCcC
Confidence            4 4688999999999999999  567899877654433322111     1112222236789999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      +.++  ++|+++..
T Consensus       249 ~~~il~~~~~~~~~  262 (277)
T cd06917         249 AEELLKSKWIKAHS  262 (277)
T ss_pred             HHHHhhChHhhccc
Confidence            9999  78887654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=2.6e-26  Score=168.74  Aligned_cols=152  Identities=20%  Similarity=0.286  Sum_probs=119.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|+++++|+|++|        +||+++.++.++|+|||++.......   ......++..|++||.+.+
T Consensus        98 ~~~~i~~~l~~lH~~~~~h~dl~~--------~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~  166 (262)
T cd05572          98 YIACVVLAFEYLHNRGIIYRDLKP--------ENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILN  166 (262)
T ss_pred             HHHHHHHHHHHHhhCCcccCCCCH--------HHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcC
Confidence            456788999999999999999999        99999999999999999987664432   1223456778999999987


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      ..++.++|+|++|+++|+++  .|..||....  ..+....+....    ..... ....+.++.+++.+||..+|++||
T Consensus       167 ~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         167 KGYDFSVDYWSLGILLYELL--TGRPPFGEDDEDPMEIYNDILKGN----GKLEF-PNYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             CCCCChhhhhhhHHHHHHHH--hCCCCcCCCCCCHHHHHHHHhccC----CCCCC-CcccCHHHHHHHHHHccCChhhCc
Confidence            78899999999999999999  5678987765  444444443211    11111 123378999999999999999999


Q ss_pred             C-----HHHH--HHHHHhc
Q psy4332         167 S-----FTEI--HLFLQRK  178 (188)
Q Consensus       167 s-----~~el--~~~l~~~  178 (188)
                      +     ++|+  |+||++.
T Consensus       240 ~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         240 GNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CCcccCHHHHhcChhhhCC
Confidence            9     8998  7888864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=1.6e-26  Score=174.21  Aligned_cols=164  Identities=18%  Similarity=0.284  Sum_probs=117.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-----cccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-----RVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~   82 (188)
                      .++.+++.|+.|+|+++|+|+|+||        +||+++.++.++++||+.+.........     .......++..|++
T Consensus       105 ~~~~~l~~~L~~LH~~~ivH~dlk~--------~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (314)
T cd08216         105 FILKDVLNALDYIHSKGFIHRSVKA--------SHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLS  176 (314)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCc--------ceEEEecCCceEEecCccceeeccccccccccccccccccccccccC
Confidence            4567899999999999999999999        9999999999999999987655322211     01122335667999


Q ss_pred             hhhhhcC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHH-HHhhcccCC-------------CC----------
Q psy4332          83 WESVRLR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL-ENISHLHAD-------------DG----------  136 (188)
Q Consensus        83 Pe~~~~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~-~~~~~~~~~-------------~~----------  136 (188)
                      ||.+.+.  .++.++|+||+|+++++++  .|..||......... +++......             ..          
T Consensus       177 PE~~~~~~~~~~~~~Diws~G~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (314)
T cd08216         177 PEVLQQNLQGYNEKSDIYSVGITACELA--NGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPN  254 (314)
T ss_pred             HHHhcCCCCCCCcchhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccc
Confidence            9998753  4788999999999999999  567899876543322 221100000             00          


Q ss_pred             ---CcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         137 ---EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       137 ---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                         .........++.++.+++.+||..||++||+++++  |+||+++++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~  304 (314)
T cd08216         255 NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR  304 (314)
T ss_pred             hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence               00000011235678999999999999999999999  8899988643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=1.8e-26  Score=171.45  Aligned_cols=153  Identities=22%  Similarity=0.265  Sum_probs=112.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ...+.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++........  ......++..|++||.+
T Consensus       103 ~~~~~ql~~~l~~LH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~  172 (286)
T cd07847         103 KKIIWQTLQAVNFCHKHNCIHRDVKP--------ENILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELL  172 (286)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCh--------hhEEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHH
Confidence            34567889999999999999999999        999999999999999999876644321  11233456779999998


Q ss_pred             hc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC---------------CCcccC---------
Q psy4332          87 RL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD---------------GEFIYL---------  141 (188)
Q Consensus        87 ~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~---------------~~~~~~---------  141 (188)
                      .+ ..++.++|+||+|+++++++  .|..||.+....+....+.......               ......         
T Consensus       173 ~~~~~~~~~~Di~slG~i~~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (286)
T cd07847         173 VGDTQYGPPVDVWAIGCVFAELL--TGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLES  250 (286)
T ss_pred             hCCCCcCchhhhHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHH
Confidence            75 34688999999999999999  5678998766544333221100000               000000         


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      ..+..+..+.+++.+||..+|++||++.|+
T Consensus       251 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei  280 (286)
T cd07847         251 KFPNISSPALSFLKGCLQMDPTERLSCEEL  280 (286)
T ss_pred             HhccCCHHHHHHHHHHhcCCccccCCHHHH
Confidence            012346789999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=1.8e-26  Score=171.45  Aligned_cols=152  Identities=21%  Similarity=0.252  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|+++++|+|++|        .||+++.++.++|+|||++........   .....++..|++||.+.
T Consensus       111 ~~~~~i~~al~~LH~~~i~h~~l~~--------~nili~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~  179 (287)
T cd07838         111 DLMRQLLRGVDFLHSHRIVHRDLKP--------QNILVTSDGQVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLL  179 (287)
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCh--------hhEEEccCCCEEEeccCcceeccCCcc---cccccccccccChHHhc
Confidence            4677889999999999999999999        999999999999999998876643321   12234567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC----------------ccc----CCCCCCh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE----------------FIY----LPTPQTT  147 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~----~~~~~~~  147 (188)
                      +..++.++|+||+|+++++++  ++..||.+....+...++.........                ...    ...+..+
T Consensus       180 ~~~~~~~~Di~s~G~~l~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (287)
T cd07838         180 QSSYATPVDMWSVGCIFAELF--RRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC  257 (287)
T ss_pred             cCCCCCcchhhhHHHHHHHHH--hCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh
Confidence            888899999999999999999  457888877766555544321110000                000    0011235


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ..+.+++.+||..||++||+++++.
T Consensus       258 ~~~~~li~~~l~~dp~~Rp~~~~il  282 (287)
T cd07838         258 EEGLDLLKKMLTFNPHKRISAFEAL  282 (287)
T ss_pred             HHHHHHHHHHhccCCccCCCHHHHh
Confidence            6788999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=3.3e-26  Score=170.25  Aligned_cols=158  Identities=21%  Similarity=0.374  Sum_probs=118.0

Q ss_pred             Cccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ...+.+++.++.|+|+ .+|+|+||||        +||+++.++.++|+|||++......    ......++..|++||.
T Consensus       105 ~~~~~~i~~~l~~LH~~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~  172 (286)
T cd06622         105 RRITYAVVKGLKFLKEEHNIIHRDVKP--------TNVLVNGNGQVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPER  172 (286)
T ss_pred             HHHHHHHHHHHHHHHhcCCEeeCCCCH--------HHEEECCCCCEEEeecCCcccccCC----ccccCCCccCccCcch
Confidence            4456788899999996 6999999999        9999999999999999988665322    1123346678999999


Q ss_pred             hhcCC------CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhc
Q psy4332          86 VRLRK------FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK  159 (188)
Q Consensus        86 ~~~~~------~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  159 (188)
                      +.+..      ++.++|+||+|+++++++  .|..||...........+......  .... ....++.++.+++.+||.
T Consensus       173 ~~~~~~~~~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~li~~~l~  247 (286)
T cd06622         173 IKSGGPNQNPTYTVQSDVWSLGLSILEMA--LGRYPYPPETYANIFAQLSAIVDG--DPPT-LPSGYSDDAQDFVAKCLN  247 (286)
T ss_pred             hcCCCCCccCCCCcccchHhHHHHHHHHH--hCCCCCCCcchhhHHHHHHHHhhc--CCCC-CCcccCHHHHHHHHHHcc
Confidence            86443      477999999999999999  567898765544433332221111  1111 123478899999999999


Q ss_pred             cCCCCCCCHHHH--HHHHHhccCC
Q psy4332         160 RSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       160 ~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      .+|++||+++++  ++|+......
T Consensus       248 ~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         248 KIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             cCcccCCCHHHHhcChhhhhccCC
Confidence            999999999999  7888776544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=1.3e-26  Score=171.89  Aligned_cols=154  Identities=20%  Similarity=0.259  Sum_probs=114.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.|+|+++|+|+|+||        +||+++.++.++|+|||.+.......  .......++..|++||.+
T Consensus       101 ~~~~~~i~~~l~~LH~~~i~H~dl~p--------~nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~  170 (283)
T cd05118         101 KSYLYQLLQGLAFCHSHGILHRDLKP--------ENLLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELL  170 (283)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCcCH--------HHEEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHH
Confidence            34677899999999999999999999        99999999999999999876664432  122234466789999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc-----------------------ccCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF-----------------------IYLP  142 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~  142 (188)
                      .+. ..+.++|+||+|+++++++|  |..||.+....+....+..........                       ....
T Consensus       171 ~~~~~~~~~~Di~slG~~l~~l~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (283)
T cd05118         171 LGDKGYSTPVDIWSVGCIFAELLS--RRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKL  248 (283)
T ss_pred             hcCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHh
Confidence            766 67889999999999999995  567887766544443332211110000                       0001


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      .+..+.++.+++.+||..||.+||++++++
T Consensus       249 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll  278 (283)
T cd05118         249 FPNASPQALDLLSQMLHYDPHKRITAEQAL  278 (283)
T ss_pred             hhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence            123567899999999999999999999983

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.94  E-value=1.9e-26  Score=172.42  Aligned_cols=156  Identities=23%  Similarity=0.330  Sum_probs=119.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++........  ......++..|++||.+.
T Consensus       119 ~i~~~l~~al~~LH~~gi~H~dL~p--------~Nili~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~  188 (293)
T cd06647         119 AVCRECLQALEFLHSNQVIHRDIKS--------DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVT  188 (293)
T ss_pred             HHHHHHHHHHHHHHhCCEeeccCCH--------HHEEEcCCCCEEEccCcceeccccccc--ccccccCChhhcCchhhc
Confidence            3566788999999999999999999        999999999999999998765543321  222345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ...++.++|+||+|+++++++  .|..||...........+..    .+..........+..+.+++++||..+|++||+
T Consensus       189 ~~~~~~~~Dv~slG~ll~~ll--~g~~pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~  262 (293)
T cd06647         189 RKAYGPKVDIWSLGIMAIEMV--EGEPPYLNENPLRALYLIAT----NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS  262 (293)
T ss_pred             cCCCCchhhHHHHHHHHHHHH--hCCCCCCCCChhhheeehhc----CCCCCCCCccccCHHHHHHHHHHccCChhhCcC
Confidence            888899999999999999999  56789977654332221111    111111122345678999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      +.++  |+||+..+
T Consensus       263 ~~~il~h~~~~~~~  276 (293)
T cd06647         263 AKELLQHPFLKIAK  276 (293)
T ss_pred             HHHHhcCHHHhcCc
Confidence            9999  88888665

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.94  E-value=3.3e-26  Score=172.19  Aligned_cols=157  Identities=22%  Similarity=0.368  Sum_probs=116.4

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+ .+++|+|+||        +||+++.++.++|+|||++......    ......++..|++||.+
T Consensus       103 ~~~~~i~~~l~~lH~~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~  170 (308)
T cd06615         103 KISIAVLRGLTYLREKHKIMHRDVKP--------SNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL  170 (308)
T ss_pred             HHHHHHHHHHHHHHhhCCEEECCCCh--------HHEEEecCCcEEEccCCCccccccc----ccccCCCCcCccChhHh
Confidence            456788899999997 6999999999        9999999999999999987655332    12334567889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC-------------------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD-------------------------------  135 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~-------------------------------  135 (188)
                      .+..++.++|+||+|+++++++  .|..||...........+.......                               
T Consensus       171 ~~~~~~~~~DiwslG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (308)
T cd06615         171 QGTHYTVQSDIWSLGLSLVEMA--IGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVN  248 (308)
T ss_pred             cCCCCCccchHHHHHHHHHHHH--hCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhc
Confidence            8777889999999999999999  5567876554333222221100000                               


Q ss_pred             CCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         136 GEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ......+...++.++.+++.+||..+|++||+++++  ++||.+.
T Consensus       249 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         249 EPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             CCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence            000111122356789999999999999999999999  8888865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=2.8e-26  Score=169.43  Aligned_cols=154  Identities=21%  Similarity=0.302  Sum_probs=114.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|+++++|+|++|        +||+++.++.++++|||++................++..|++||.+.
T Consensus       112 ~~~~qi~~~l~~lH~~~i~H~dl~~--------~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  183 (272)
T cd06629         112 FFTEQVLEGLAYLHSKGILHRDLKA--------DNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIH  183 (272)
T ss_pred             HHHHHHHHHHHHHhhCCeeecCCCh--------hhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhc
Confidence            3567889999999999999999999        99999999999999999987654322111223345678899999987


Q ss_pred             cCC--CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRK--FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~--~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..  ++.++|+||+|+++++++  .|..||......+....+..... ...........++.++.+++.+||..+|++|
T Consensus       184 ~~~~~~~~~~Dv~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  260 (272)
T cd06629         184 SYSQGYSAKVDIWSLGCVVLEMF--AGRRPWSDEEAIAAMFKLGNKRS-APPIPPDVSMNLSPVALDFLNACFTINPDNR  260 (272)
T ss_pred             cccCCCCccchhHHHHHHHHHHH--hCCCCCcCcchHHHHHHhhcccc-CCcCCccccccCCHHHHHHHHHHhcCChhhC
Confidence            654  788999999999999999  56788876554433332221111 0111111123467899999999999999999


Q ss_pred             CCHHHHH
Q psy4332         166 PSFTEIH  172 (188)
Q Consensus       166 ps~~el~  172 (188)
                      |++++++
T Consensus       261 ps~~~il  267 (272)
T cd06629         261 PTARELL  267 (272)
T ss_pred             CCHHHHh
Confidence            9999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=3.8e-26  Score=170.64  Aligned_cols=161  Identities=17%  Similarity=0.248  Sum_probs=117.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+|+.|+.|+|++|++|+||+|        .||+++. ++.+|++|||++.......  .......+++.|++||++
T Consensus       106 ~~~~qi~~aL~~LH~~~i~H~dl~p--------~nill~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~  175 (294)
T PLN00009        106 TYLYQILRGIAYCHSHRVLHRDLKP--------QNLLIDRRTNALKLADFGLARAFGIPV--RTFTHEVVTLWYRAPEIL  175 (294)
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCc--------ceEEEECCCCEEEEcccccccccCCCc--cccccCceeecccCHHHH
Confidence            3567899999999999999999999        9999985 5678999999986553221  112233457789999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC----------------------cccCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE----------------------FIYLPT  143 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~  143 (188)
                      .+. .++.++|+||+|+++++++  +|..||......+...++......+..                      ......
T Consensus       176 ~~~~~~~~~~Dv~slG~i~~~l~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (294)
T PLN00009        176 LGSRHYSTPVDIWSVGCIFAEMV--NQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVV  253 (294)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhC
Confidence            754 4688999999999999999  567888876654444333211110000                      000012


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      +..+.++.+++.+|+..+|++||++.++  ++||++...
T Consensus       254 ~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        254 PTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD  292 (294)
T ss_pred             cCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence            3457789999999999999999999999  788887643

>KOG0199|consensus

Probab=99.94  E-value=2.3e-26  Score=180.92  Aligned_cols=150  Identities=31%  Similarity=0.614  Sum_probs=129.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCC-ccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..|.+|+.|+.||.++++|||||-.        .|+++...-.+||+|||+.+.+... ..|.+.........|-|||.+
T Consensus       216 dya~QiA~aM~YLeskrlvHRDLAA--------RNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsL  287 (1039)
T KOG0199|consen  216 DYAMQIAKAMQYLESKRLVHRDLAA--------RNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESL  287 (1039)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhh--------hhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHh
Confidence            4577899999999999999999999        9999988889999999999888644 345555667778889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      ....|+.++|||.||+.+|||+| +|..||.+....++++.+..     +++.. ....+++++.+++..||..+|++||
T Consensus       288 rh~kFShaSDvWmyGVTiWEMFt-yGEePW~G~~g~qIL~~iD~-----~erLp-RPk~csedIY~imk~cWah~paDRp  360 (1039)
T KOG0199|consen  288 RHRKFSHASDVWMYGVTIWEMFT-YGEEPWVGCRGIQILKNIDA-----GERLP-RPKYCSEDIYQIMKNCWAHNPADRP  360 (1039)
T ss_pred             ccccccccchhhhhhhhHHhhhc-cCCCCCCCCCHHHHHHhccc-----cccCC-CCCCChHHHHHHHHHhccCCccccc
Confidence            99999999999999999999999 58999999999998887763     22222 2356799999999999999999999


Q ss_pred             CHHHHH
Q psy4332         167 SFTEIH  172 (188)
Q Consensus       167 s~~el~  172 (188)
                      +|..+.
T Consensus       361 tFsair  366 (1039)
T KOG0199|consen  361 TFSAIR  366 (1039)
T ss_pred             cHHHHH
Confidence            999995

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=3.5e-26  Score=171.08  Aligned_cols=156  Identities=22%  Similarity=0.405  Sum_probs=117.4

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+ +||+|+|++|        +||+++.++.++|+|||++.......   ......++..|++||.+
T Consensus       118 ~i~~~i~~~l~~lH~~~~i~H~dl~p--------~nill~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~  186 (296)
T cd06618         118 KMTVAIVKALHYLKEKHGVIHRDVKP--------SNILLDASGNVKLCDFGISGRLVDSK---AKTRSAGCAAYMAPERI  186 (296)
T ss_pred             HHHHHHHHHHHHHHhhCCEecCCCcH--------HHEEEcCCCCEEECccccchhccCCC---cccCCCCCccccCHhhc
Confidence            578889999999997 6999999999        99999999999999999987654322   11233466789999998


Q ss_pred             hcCC----CCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 RLRK----FTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~~~~----~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      .+..    ++.++|+||+|+++|+++  +|..||..... .+....+....    .........++.++.+++.+||..|
T Consensus       187 ~~~~~~~~~~~~~Di~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~  260 (296)
T cd06618         187 DPPDPNPKYDIRADVWSLGISLVELA--TGQFPYKNCKTEFEVLTKILQEE----PPSLPPNEGFSPDFCSFVDLCLTKD  260 (296)
T ss_pred             CCCCCccccccchhHHHHHHHHHHHH--hCCCCCCcchhHHHHHHHHhcCC----CCCCCCCCCCCHHHHHHHHHHccCC
Confidence            7543    678999999999999999  56788876432 23333332211    1111111246789999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhccC
Q psy4332         162 PTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~~  180 (188)
                      |++||+++++  ++|++....
T Consensus       261 p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         261 HRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             hhhCCCHHHHhcChhhhccch
Confidence            9999999999  788876543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.1e-26  Score=177.15  Aligned_cols=161  Identities=19%  Similarity=0.212  Sum_probs=121.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++|+|||++......     .....++..|++||.+.
T Consensus       122 ~~~~ql~~aL~~LH~~gi~H~dlkp--------~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~  188 (343)
T cd07851         122 FLVYQILRGLKYIHSAGIIHRDLKP--------SNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML  188 (343)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHeEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHh
Confidence            4567889999999999999999999        9999999999999999998765432     12334567799999986


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC--------------------c----ccCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE--------------------F----IYLP  142 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~----~~~~  142 (188)
                      +. ..+.++||||+|+++++++  +|..||.+.........+.........                    .    ....
T Consensus       189 ~~~~~~~~~DvwslGv~l~ell--tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (343)
T cd07851         189 NWMHYNQTVDIWSVGCIMAELL--TGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV  266 (343)
T ss_pred             CCCCCCchHhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH
Confidence            53 5788999999999999999  467888776655544444332111100                    0    0000


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYV  183 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~  183 (188)
                      ....+.++.+++.+||..+|++|||+.++  |+||++......
T Consensus       267 ~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~  309 (343)
T cd07851         267 FSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPED  309 (343)
T ss_pred             hccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcc
Confidence            12347789999999999999999999999  789987755433

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=3.6e-26  Score=169.46  Aligned_cols=154  Identities=20%  Similarity=0.349  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|+++++|+|++|        .||+++.++.++++|||++.......  .......++..|+|||.+.
T Consensus       105 ~~~~~l~~~l~~lh~~~ivH~dl~p--------~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~apE~~~  174 (277)
T cd06640         105 TMLKEILKGLDYLHSEKKIHRDIKA--------ANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQ  174 (277)
T ss_pred             HHHHHHHHHHHHHHhCCccCcCCCh--------hhEEEcCCCCEEEcccccceeccCCc--cccccccCcccccCHhHhc
Confidence            3566888999999999999999999        99999999999999999986654322  1122334667899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++  +|..||....+......+....      ........+..+.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Dv~slG~il~el~--tg~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  246 (277)
T cd06640         175 QSAYDSKADIWSLGITAIELA--KGEPPNSDMHPMRVLFLIPKNN------PPTLTGEFSKPFKEFIDACLNKDPSFRPT  246 (277)
T ss_pred             cCCCccHHHHHHHHHHHHHHH--HCCCCCCCcChHhHhhhhhcCC------CCCCchhhhHHHHHHHHHHcccCcccCcC
Confidence            888899999999999999999  5678988776555443332111      11112345778999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      ++++  |+++.+..
T Consensus       247 ~~~il~~~~~~~~~  260 (277)
T cd06640         247 AKELLKHKFIVKNA  260 (277)
T ss_pred             HHHHHhChHhhhcc
Confidence            9999  77776553

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=2.3e-26  Score=168.82  Aligned_cols=156  Identities=21%  Similarity=0.314  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc------ccccCCCCCCcccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY------YRVHDNTSLPIRWM   81 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~~   81 (188)
                      .++.+++.++.++|++|++|+|++|        +||+++.++.++|+|||++........      ........++..|+
T Consensus        97 ~i~~qi~~~L~~lH~~~i~H~di~~--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (265)
T cd05579          97 IYIAEIVLALEYLHSNGIIHRDLKP--------DNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI  168 (265)
T ss_pred             HHHHHHHHHHHHHHHcCeecCCCCH--------HHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCcccc
Confidence            3567899999999999999999999        999999999999999998765433211      01223344667899


Q ss_pred             chhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        82 ~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +||.......+.++|+||+|+++++++  +|..||......+....+....     .........+..+.+++.+||+.+
T Consensus       169 ~Pe~~~~~~~~~~~Dv~slG~~~~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~  241 (265)
T cd05579         169 APEVILGQGHSKTVDWWSLGCILYEFL--VGIPPFHGETPEEIFQNILNGK-----IEWPEDVEVSDEAIDLISKLLVPD  241 (265)
T ss_pred             CHHHhcCCCCCcchhhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhcCC-----cCCCccccCCHHHHHHHHHHhcCC
Confidence            999998888889999999999999999  5678998877666665554311     111111224789999999999999


Q ss_pred             CCCCCCH---HHH--HHHHHhc
Q psy4332         162 PTERPSF---TEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rps~---~el--~~~l~~~  178 (188)
                      |++||++   .++  ++||+++
T Consensus       242 p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         242 PEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             HhhcCCCccHHHHhcCccccCC
Confidence            9999999   666  6666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=5.4e-26  Score=169.08  Aligned_cols=155  Identities=26%  Similarity=0.451  Sum_probs=113.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++......... .......++..|+|||.+
T Consensus       113 ~i~~~i~~aL~~lH~~gi~H~dlkp--------~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~  184 (284)
T cd05079         113 KYAVQICKGMDYLGSRQYVHRDLAA--------RNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL  184 (284)
T ss_pred             HHHHHHHHHHHHHHHCCeeecccch--------heEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHh
Confidence            4567889999999999999999999        9999999999999999998766433221 112234456679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-C--------------HHHHHHHhhcccCCCCCcccCCCCCChHHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-T--------------DLEVLENISHLHADDGEFIYLPTPQTTKDIL  151 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (188)
                      .+..++.++||||+|+++|+++|+.  .|+... .              .......+..     ... ......++.++.
T Consensus       185 ~~~~~~~~~Di~slG~il~ellt~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~  256 (284)
T cd05079         185 IQSKFYIASDVWSFGVTLYELLTYC--DSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE-----GKR-LPRPPNCPEEVY  256 (284)
T ss_pred             ccCCCCccccchhhhhhhhhhhcCC--CCCccccchhhhhcccccccccHHHHHHHHHc-----Ccc-CCCCCCCCHHHH
Confidence            8888899999999999999999642  222110 0              0011111110     111 112245678999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         152 DLMNECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       152 ~li~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      +++.+||..+|++||+++++...|+++
T Consensus       257 ~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         257 QLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            999999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=1.9e-26  Score=171.25  Aligned_cols=155  Identities=24%  Similarity=0.412  Sum_probs=117.1

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++ +++|+|+||        +||+++.++.+||+|||++.......   ......++..|++||.+
T Consensus       107 ~~~~qi~~~l~~lH~~~~i~h~dlkp--------~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~  175 (283)
T cd06617         107 KIAVSIVKALEYLHSKLSVIHRDVKP--------SNVLINRNGQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERI  175 (283)
T ss_pred             HHHHHHHHHHHHHhhcCCeecCCCCH--------HHEEECCCCCEEEeeccccccccccc---ccccccCCccccChhhc
Confidence            4567889999999997 999999999        99999999999999999987654321   11234467789999988


Q ss_pred             hc----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 RL----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~~----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      .+    ..++.++|+|++|+++++++  +|..||.... ..+.......     ......+...++.++.+++.+||..+
T Consensus       176 ~~~~~~~~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~~  248 (283)
T cd06617         176 NPELNQKGYDVKSDVWSLGITMIELA--TGRFPYDSWKTPFQQLKQVVE-----EPSPQLPAEKFSPEFQDFVNKCLKKN  248 (283)
T ss_pred             CCcccccccCccccchhhHHHHHHHH--hCCCCCCccccCHHHHHHHHh-----cCCCCCCccccCHHHHHHHHHHccCC
Confidence            64    34578999999999999999  5678886532 2222222221     11112223346789999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhccC
Q psy4332         162 PTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~~  180 (188)
                      |++||++.++  |+||+....
T Consensus       249 p~~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         249 YKERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             hhhCcCHHHHhcCchhhhccc
Confidence            9999999999  788887653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3e-26  Score=174.95  Aligned_cols=162  Identities=17%  Similarity=0.174  Sum_probs=119.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+|+||        .||+++.++.++|+|||++......     .....++..|+|||.+.+
T Consensus       125 i~~qi~~aL~~LH~~~ivH~dlkp--------~NIll~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         125 LIYQILRGLKYIHSADIIHRDLKP--------SNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCh--------HHEEEcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhC
Confidence            567889999999999999999999        9999999999999999997754322     123346778999999865


Q ss_pred             -CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC------------------------CcccCCC
Q psy4332          89 -RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG------------------------EFIYLPT  143 (188)
Q Consensus        89 -~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~  143 (188)
                       ..++.++||||+|+++++++  +|..||...........+........                        .......
T Consensus       192 ~~~~~~~~DvwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (345)
T cd07877         192 WMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF  269 (345)
T ss_pred             ccCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhc
Confidence             45788999999999999999  45678876554433332221111000                        0000001


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP  185 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~  185 (188)
                      ...+.++.+++.+|+..||++||++.++  |+||++.......|
T Consensus       270 ~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~  313 (345)
T cd07877         270 IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP  313 (345)
T ss_pred             CCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccc
Confidence            1346789999999999999999999999  88999876655544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=1.6e-26  Score=171.80  Aligned_cols=157  Identities=24%  Similarity=0.301  Sum_probs=115.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.++++|||++........ .......++..|+|||.+.
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07832         103 SYMRMLLKGVAYMHANGIMHRDLKP--------ANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLY  173 (286)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCcCH--------HHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeee
Confidence            4567899999999999999999999        999999999999999999876644321 1223445778899999986


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC----------------c-------ccCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE----------------F-------IYLPT  143 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------~-------~~~~~  143 (188)
                      +. ..+.++||||+|+++++++|  |..+|.+.........+.........                .       .....
T Consensus       174 ~~~~~~~~~Di~slG~~l~~l~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (286)
T cd07832         174 GARKYDPGVDLWAVGCIFAELLN--GSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIF  251 (286)
T ss_pred             ccccCCchhHHHHHHHHHHHHHc--CCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhC
Confidence            54 35889999999999999995  46777766654444333221110000                0       00001


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFL  175 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l  175 (188)
                      +..+.++.+++.+||..+|++||+++++  |+||
T Consensus       252 ~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~  285 (286)
T cd07832         252 PDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF  285 (286)
T ss_pred             CCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence            2346789999999999999999999999  5554

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=2.5e-26  Score=171.35  Aligned_cols=148  Identities=19%  Similarity=0.235  Sum_probs=119.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.++|++||+|+|++|        .||+++.++.+||+|||++......     .....+++.|++||.+.+
T Consensus       106 ~~~qil~~l~~lH~~~i~H~dl~p--------~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~  172 (290)
T cd05580         106 YAAQVVLALEYLHSLDIVYRDLKP--------ENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILS  172 (290)
T ss_pred             HHHHHHHHHHHHHHCCEecCCCCH--------HHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcC
Confidence            567889999999999999999999        9999999999999999998766433     234457788999999987


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ...+.++|+||+|+++++++  +|..||...........+.....       ......+..+.+++.+||..||.+|+  
T Consensus       173 ~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~R~~~  243 (290)
T cd05580         173 KGYGKAVDWWALGILIYEML--AGYPPFFDDNPIQIYEKILEGKV-------RFPSFFSPDAKDLIRNLLQVDLTKRLGN  243 (290)
T ss_pred             CCCCccccHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhcCCc-------cCCccCCHHHHHHHHHHccCCHHHccCc
Confidence            78889999999999999999  56789987775555554442211       11234578999999999999999999  


Q ss_pred             ---CHHHH--HHHHHhc
Q psy4332         167 ---SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ---s~~el--~~~l~~~  178 (188)
                         +++|+  |+|+++.
T Consensus       244 ~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         244 LKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             ccCCHHHHHcCcccccC
Confidence               88888  6766544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.1e-26  Score=168.13  Aligned_cols=151  Identities=19%  Similarity=0.278  Sum_probs=115.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++|+|+|+||        +||+++.++.++|+|||++........  ......++..|++||.+.
T Consensus       105 ~~~~ql~~~l~~lh~~~i~h~dl~p--------~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~  174 (262)
T cd06613         105 YVCRETLKGLAYLHETGKIHRDIKG--------ANILLTEDGDVKLADFGVSAQLTATIA--KRKSFIGTPYWMAPEVAA  174 (262)
T ss_pred             HHHHHHHHHHHHHHhCCceecCCCh--------hhEEECCCCCEEECccccchhhhhhhh--ccccccCCccccCchhhc
Confidence            3567889999999999999999999        999999999999999999876543321  223345677899999987


Q ss_pred             cC---CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 LR---KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ~~---~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      +.   .++.++|+||+|+++++++  +|..||.+.................  .........+.++.+++.+||..+|.+
T Consensus       175 ~~~~~~~~~~~Di~slG~~l~~~~--tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~  250 (262)
T cd06613         175 VERKGGYDGKCDIWALGITAIELA--ELQPPMFDLHPMRALFLISKSNFPP--PKLKDKEKWSPVFHDFIKKCLTKDPKK  250 (262)
T ss_pred             ccccCCcCchhhhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhccCCC--ccccchhhhhHHHHHHHHHHcCCChhh
Confidence            66   7888999999999999999  5678988776555444333211111  111112345678999999999999999


Q ss_pred             CCCHHHHH
Q psy4332         165 RPSFTEIH  172 (188)
Q Consensus       165 Rps~~el~  172 (188)
                      ||++++++
T Consensus       251 Rpt~~~il  258 (262)
T cd06613         251 RPTATKLL  258 (262)
T ss_pred             CCCHHHHh
Confidence            99999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=5.3e-26  Score=169.90  Aligned_cols=156  Identities=19%  Similarity=0.294  Sum_probs=121.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++|++|+|++|        .||+++.++.++++|||++.......  .......++..|++||.+.
T Consensus       120 ~~~~ql~~~l~~lH~~givH~dl~p--------~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~  189 (292)
T cd06657         120 AVCLAVLKALSVLHAQGVIHRDIKS--------DSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELIS  189 (292)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCCEEEcccccceeccccc--ccccccccCccccCHHHhc
Confidence            4677889999999999999999999        99999999999999999876554322  1223345678899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||.+....+....+.....   . ........+..+.+++.+||..+|.+||+
T Consensus       190 ~~~~~~~~Dv~slGvil~el~--tg~~p~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~li~~~l~~~P~~R~~  263 (292)
T cd06657         190 RLPYGPEVDIWSLGIMVIEMV--DGEPPYFNEPPLKAMKMIRDNLP---P-KLKNLHKVSPSLKGFLDRLLVRDPAQRAT  263 (292)
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhhCC---c-ccCCcccCCHHHHHHHHHHHhCCcccCcC
Confidence            778899999999999999999  56778887765554444332111   1 11112345778999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      +.++  |+||.+..
T Consensus       264 ~~~ll~~~~~~~~~  277 (292)
T cd06657         264 AAELLKHPFLAKAG  277 (292)
T ss_pred             HHHHhcChHHhccC
Confidence            9999  78888765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=2.7e-26  Score=171.39  Aligned_cols=153  Identities=22%  Similarity=0.271  Sum_probs=113.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||++|++|+||||        +||+++.++.++|+|||++.......  .......++..|++||.+.
T Consensus       110 ~i~~qi~~aL~~LH~~~i~H~dl~p--------~nili~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~  179 (293)
T cd07843         110 CLMLQLLSGVAHLHDNWILHRDLKT--------SNLLLNNRGILKICDFGLAREYGSPL--KPYTQLVVTLWYRAPELLL  179 (293)
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCH--------HHEEECCCCcEEEeecCceeeccCCc--cccccccccccccCchhhc
Confidence            4677899999999999999999999        99999999999999999987665432  1222344567899999987


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC------------------------CCc-ccC
Q psy4332          88 LRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD------------------------GEF-IYL  141 (188)
Q Consensus        88 ~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~-~~~  141 (188)
                      +.. .+.++|+||+|+++++++  .|..||..........++.......                        ... ...
T Consensus       180 ~~~~~~~~~Di~slG~~l~~l~--~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (293)
T cd07843         180 GAKEYSTAIDMWSVGCIFAELL--TKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKF  257 (293)
T ss_pred             CCccccchhhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccc
Confidence            543 588999999999999999  5678888776554444332111000                        000 001


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      +....+..+.+++.+||..+|++||++.|++
T Consensus       258 ~~~~~~~~~~~li~~~l~~~p~~R~t~~ell  288 (293)
T cd07843         258 PALSLSDNGFDLLNRLLTYDPAKRISAEDAL  288 (293)
T ss_pred             cccCCChHHHHHHHHHhccCccccCCHHHHh
Confidence            1111477899999999999999999999983

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0696|consensus

Probab=99.93  E-value=3.7e-26  Score=170.85  Aligned_cols=152  Identities=22%  Similarity=0.354  Sum_probs=127.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..|.+|+.+|.+||++||++||||.        +||+++..|++||+|||+++.-...+  ......+||+.|+|||.+.
T Consensus       454 FYAaEiaigLFFLh~kgIiYRDLKL--------DNvmLd~eGHiKi~DFGmcKEni~~~--~TTkTFCGTPdYiAPEIi~  523 (683)
T KOG0696|consen  454 FYAAEIAIGLFFLHSKGIIYRDLKL--------DNVMLDSEGHIKIADFGMCKENIFDG--VTTKTFCGTPDYIAPEIIA  523 (683)
T ss_pred             hhhHHHHHHhhhhhcCCeeeeeccc--------cceEeccCCceEeeecccccccccCC--cceeeecCCCcccccceEE
Confidence            3578899999999999999999999        99999999999999999987543332  2345678999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      .+.+..++|.|++|+++|||+  .|..||.+.+..++...+.....       ..+..++.+..++....+.+.|.+|..
T Consensus       524 YqPYgksvDWWa~GVLLyEml--aGQpPFdGeDE~elF~aI~ehnv-------syPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  524 YQPYGKSVDWWAFGVLLYEML--AGQPPFDGEDEDELFQAIMEHNV-------SYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             ecccccchhHHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHHHccC-------cCcccccHHHHHHHHHHhhcCCccccC
Confidence            999999999999999999999  78999999999999988875332       122345789999999999999999986


Q ss_pred             HH-----HH--HHHHHhc
Q psy4332         168 FT-----EI--HLFLQRK  178 (188)
Q Consensus       168 ~~-----el--~~~l~~~  178 (188)
                      +.     ++  |++|+.+
T Consensus       595 cg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  595 CGPEGERDIREHPFFRRI  612 (683)
T ss_pred             CCCccccchhhCcchhhc
Confidence            53     34  6777655

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=3.9e-26  Score=171.69  Aligned_cols=150  Identities=23%  Similarity=0.350  Sum_probs=116.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|++|        .||+++.++.++|+|||++......      ....++..|+|||.+.
T Consensus       119 ~~~~ql~~~L~~LH~~~i~H~dl~p--------~nIl~~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~  184 (307)
T cd06607         119 AICHGALQGLAYLHSHERIHRDIKA--------GNILLTEPGTVKLADFGSASLVSPA------NSFVGTPYWMAPEVIL  184 (307)
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCc--------ccEEECCCCCEEEeecCcceecCCC------CCccCCccccCceeee
Confidence            3567889999999999999999999        9999999999999999987654322      2334667799999874


Q ss_pred             ---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 ---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                         ...++.++||||+|+++|+++  +|..||.+.........+...     ..........+.++.+++.+||..+|++
T Consensus       185 ~~~~~~~~~~sDv~s~G~il~el~--tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~  257 (307)
T cd06607         185 AMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQN-----DSPTLSSNDWSDYFRNFVDSCLQKIPQD  257 (307)
T ss_pred             ccCCCCCCcccchHHHHHHHHHHH--cCCCCCCCccHHHHHHHHhcC-----CCCCCCchhhCHHHHHHHHHHhcCChhh
Confidence               345788999999999999999  567888877655544443321     1112222345778999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      ||++.++  ++|+.+.
T Consensus       258 Rp~~~~il~~~~~~~~  273 (307)
T cd06607         258 RPSSEELLKHRFVLRE  273 (307)
T ss_pred             CcCHHHHhcChhhccc
Confidence            9999999  6676643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=2.3e-26  Score=168.46  Aligned_cols=147  Identities=20%  Similarity=0.284  Sum_probs=116.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++|++|+|++|        +||+++.++.++++|||++........  ......++..|++||.+.
T Consensus       105 ~~~~~l~~~l~~lh~~~i~h~~l~~--------~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~  174 (256)
T cd08218         105 DWFVQICLALKHVHDRKILHRDIKS--------QNIFLTKDGTIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICE  174 (256)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCH--------HHEEEcCCCCEEEeeccceeecCcchh--hhhhccCCccccCHHHhC
Confidence            3467889999999999999999999        999999999999999998876543221  112334677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++|+||+|+++++++  .|..||......+....+.....      .......+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Dv~slG~i~~~l~--~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~  246 (256)
T cd08218         175 NRPYNNKSDIWALGCVLYEMC--TLKHAFEAGNMKNLVLKIIRGSY------PPVSSHYSYDLRNLVSQLFKRNPRDRPS  246 (256)
T ss_pred             CCCCCCccchhHHHHHHHHHH--cCCCCccCCCHHHHHHHHhcCCC------CCCcccCCHHHHHHHHHHhhCChhhCcC
Confidence            888889999999999999999  56788887766665555543211      1122456789999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.+++
T Consensus       247 ~~~vl  251 (256)
T cd08218         247 VNSIL  251 (256)
T ss_pred             HHHHh
Confidence            99994

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=3.3e-26  Score=170.23  Aligned_cols=149  Identities=19%  Similarity=0.281  Sum_probs=112.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++|+|+|+||        +||+++.++.++++|||++.......  .......++..|+|||.+..
T Consensus       129 ~~~~i~~~l~~lH~~~i~H~dlkp--------~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~  198 (286)
T cd06638         129 ILHEALMGLQHLHVNKTIHRDVKG--------NNILLTTEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIAC  198 (286)
T ss_pred             HHHHHHHHHHHHHhCCccccCCCH--------HhEEECCCCCEEEccCCceeecccCC--CccccccCCCcccChhhhch
Confidence            567788999999999999999999        99999999999999999987654321  11223457788999998753


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           ..++.++|+||+|+++++++  +|..||...............    ...........+.++.+++.+||..||+
T Consensus       199 ~~~~~~~~~~~~Dv~slGvi~~el~--~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~  272 (286)
T cd06638         199 EQQLDSTYDARCDVWSLGITAIELG--DGDPPLADLHPMRALFKIPRN----PPPTLHQPELWSNEFNDFIRKCLTKDYE  272 (286)
T ss_pred             hhhccccccchhhhhhHHHHHHHHh--cCCCCCCCCchhHHHhhcccc----CCCcccCCCCcCHHHHHHHHHHccCCcc
Confidence                 34688999999999999999  567888776544433322211    1111111223467899999999999999


Q ss_pred             CCCCHHHHHH
Q psy4332         164 ERPSFTEIHL  173 (188)
Q Consensus       164 ~Rps~~el~~  173 (188)
                      +||++.|++.
T Consensus       273 ~Rps~~ell~  282 (286)
T cd06638         273 KRPTVSDLLQ  282 (286)
T ss_pred             cCCCHHHHhh
Confidence            9999999843

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=4.7e-26  Score=188.98  Aligned_cols=154  Identities=18%  Similarity=0.247  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhccc-------ccccccchhhhhccccccceEEcC-----------------cceEEEccCCCCccCC
Q psy4332           8 PQASNLAVVPLLRNKN-------GVEHSSLKKKCIKIFDFKNCLVGK-----------------KFEIKISDFATDSDMF   63 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-------~i~h~~lk~~~i~~~~~~nill~~-----------------~~~~kl~dfg~~~~~~   63 (188)
                      .++.+|+.||.|||+.       +|+|+||||        +|||++.                 .+.+||+|||++....
T Consensus       122 ~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP--------eNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~  193 (1021)
T PTZ00266        122 DITRQLLHALAYCHNLKDGPNGERVLHRDLKP--------QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG  193 (1021)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCceeccCcH--------HHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence            4577899999999984       599999999        7777643                 3458999999987654


Q ss_pred             CCccccccCCCCCCccccchhhhhcC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHH-HHHhhcccCCCCCccc
Q psy4332          64 SSDYYRVHDNTSLPIRWMAWESVRLR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV-LENISHLHADDGEFIY  140 (188)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~  140 (188)
                      ...   ......+++.|+|||++.+.  .++.++|||||||++|+|+  +|..||........ ...+...       ..
T Consensus       194 ~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELL--TGk~PF~~~~~~~qli~~lk~~-------p~  261 (1021)
T PTZ00266        194 IES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC--SGKTPFHKANNFSQLISELKRG-------PD  261 (1021)
T ss_pred             ccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHH--HCCCCCCcCCcHHHHHHHHhcC-------CC
Confidence            322   22345678899999998643  4788999999999999999  56789976654332 2222211       12


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      .+....+.++.+||..||..+|.+||++.++  +++++.+...
T Consensus       262 lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p  304 (1021)
T PTZ00266        262 LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPP  304 (1021)
T ss_pred             CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence            2224457899999999999999999999999  6888866543

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.93  E-value=2.6e-26  Score=170.25  Aligned_cols=154  Identities=18%  Similarity=0.227  Sum_probs=115.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++|++|+||+|        +||+++.++.++|+|||.+.......   ......++..|++||.+.+
T Consensus       100 ~~~ql~~~l~~lH~~~i~H~di~p--------~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~~PE~~~~  168 (277)
T cd05577         100 YAAQIICGLEHLHQRRIVYRDLKP--------ENVLLDDHGNVRISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQG  168 (277)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCH--------HHEEECCCCCEEEccCcchhhhccCC---ccccccCCCCcCCHHHhcC
Confidence            456888999999999999999999        99999999999999999876553321   1123345678999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++|+||+|+++++++  .|..||...........+.....   .........++.++.+++.+||+.+|++||  
T Consensus       169 ~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  243 (277)
T cd05577         169 EVYDFSVDWFALGCTLYEMI--AGRSPFRQRKEKVEKEELKRRTL---EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGC  243 (277)
T ss_pred             CCCCchhhhHHHHHHHHHHh--hCCCCCCCCcccccHHHHHhccc---cccccCCccCCHHHHHHHHHHccCChhHccCC
Confidence            78899999999999999999  56789876543222222211111   011112244688999999999999999999  


Q ss_pred             ---CHHHH--HHHHHhc
Q psy4332         167 ---SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ---s~~el--~~~l~~~  178 (188)
                         ++.++  |+||.++
T Consensus       244 ~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         244 RGGSADEVREHPLFKDL  260 (277)
T ss_pred             CcccHHHHHhChhhhcC
Confidence               77778  7777654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG4717|consensus

Probab=99.93  E-value=2.4e-26  Score=175.88  Aligned_cols=155  Identities=22%  Similarity=0.315  Sum_probs=132.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceE-EcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCL-VGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nil-l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ...+|+.|+.|+|+-.++|||+||        +||+ +..-|.+||+|||++..+..+.   .....+|+..|-|||.+.
T Consensus       123 YF~QI~~AI~YCHqLHVVHRDLKP--------ENVVFFEKlGlVKLTDFGFSNkf~PG~---kL~TsCGSLAYSAPEILL  191 (864)
T KOG4717|consen  123 YFAQIVHAISYCHQLHVVHRDLKP--------ENVVFFEKLGLVKLTDFGFSNKFQPGK---KLTTSCGSLAYSAPEILL  191 (864)
T ss_pred             HHHHHHHHHHHHhhhhhhcccCCc--------ceeEEeeecCceEeeeccccccCCCcc---hhhcccchhhccCchhhh
Confidence            346788999999999999999999        9985 5566899999999998886654   335678899999999999


Q ss_pred             cCCCCC-hhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTT-KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~-~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..+.. .+||||+|+++|-+.  +|..||+..++.+...++....++-       +...+.+++++|..||..||.+|.
T Consensus       192 GDsYDAPAVDiWSLGVILyMLV--CGq~PFqeANDSETLTmImDCKYtv-------PshvS~eCrdLI~sMLvRdPkkRA  262 (864)
T KOG4717|consen  192 GDSYDAPAVDIWSLGVILYMLV--CGQPPFQEANDSETLTMIMDCKYTV-------PSHVSKECRDLIQSMLVRDPKKRA  262 (864)
T ss_pred             cCccCCcchhhhHHHHHHHHHH--hCCCccccccchhhhhhhhcccccC-------chhhhHHHHHHHHHHHhcCchhhc
Confidence            888754 799999999999999  8999999999999999888655422       245678999999999999999999


Q ss_pred             CHHHH--HHHHHhccCCCC
Q psy4332         167 SFTEI--HLFLQRKNLGYV  183 (188)
Q Consensus       167 s~~el--~~~l~~~~~~~~  183 (188)
                      +.+++  +.|||.+..+..
T Consensus       263 slEeI~s~~Wlq~~D~~~s  281 (864)
T KOG4717|consen  263 SLEEIVSTSWLQAGDRGLS  281 (864)
T ss_pred             cHHHHhccccccCCCCCcc
Confidence            99999  789998876544

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.93  E-value=3.2e-26  Score=171.95  Aligned_cols=154  Identities=19%  Similarity=0.196  Sum_probs=110.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.++.|+|++|++|+|+||        +||+++.++.+||+|||++.........  .......++..|+|||.
T Consensus       123 ~i~~qi~~al~~lH~~~i~H~dl~p--------~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (310)
T cd07865         123 KVMKMLLNGLYYIHRNKILHRDMKA--------ANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPEL  194 (310)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCH--------HHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHH
Confidence            4567899999999999999999999        9999999999999999998765432211  11123345678999998


Q ss_pred             hhcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-------------------------
Q psy4332          86 VRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-------------------------  139 (188)
Q Consensus        86 ~~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  139 (188)
                      +.+.. ++.++|+||+|+++++++|  |..||.+.........+...........                         
T Consensus       195 ~~~~~~~~~~~Di~slG~~l~el~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (310)
T cd07865         195 LLGERDYGPPIDMWGAGCIMAEMWT--RSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKE  272 (310)
T ss_pred             hcCCcccCchhhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHH
Confidence            86543 6789999999999999994  5678877665443333222111000000                         


Q ss_pred             cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      .......+..+.+++.+||..||++||+++++
T Consensus       273 ~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~  304 (310)
T cd07865         273 RLKPYVKDPHALDLIDKLLVLDPAKRIDADTA  304 (310)
T ss_pred             hcccccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence            00011124567899999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-26  Score=175.19  Aligned_cols=158  Identities=16%  Similarity=0.249  Sum_probs=117.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......+++.|+|||++.
T Consensus       106 ~~~~qi~~~l~~lH~~~ivH~dlkp--------~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         106 FYLAEMVLAIDSVHQLGYVHRDIKP--------DNVLLDKNGHIRLADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             HHHHHHHHHHHHHHhCCeEECCCCH--------HHEEECCCCCEEEEECCceeecCCCCC-ccccceeccccccCHHHHh
Confidence            3456889999999999999999999        999999999999999999866543321 1112345788999999986


Q ss_pred             c-----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 L-----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 ~-----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .     ..++.++||||+||++|+++  .|..||.+....+....+......  ..........+.++.+++.+|+..++
T Consensus       177 ~~~~~~~~~~~~~DiwslG~~l~el~--~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~li~~ll~~~~  252 (331)
T cd05597         177 AMEDGKGRYGPECDWWSLGVCMYEML--YGETPFYAESLVETYGKIMNHKEH--FQFPPDVTDVSEEAKDLIRRLICSPE  252 (331)
T ss_pred             hccccccCCCCcceeehhhhHHHHHh--hCCCCCCCCCHHHHHHHHHcCCCc--ccCCCccCCCCHHHHHHHHHHccCcc
Confidence            3     34677999999999999999  578899887766665555432111  11111223468899999999886544


Q ss_pred             C--CCCCHHHH--HHHHHhc
Q psy4332         163 T--ERPSFTEI--HLFLQRK  178 (188)
Q Consensus       163 ~--~Rps~~el--~~~l~~~  178 (188)
                      +  .|++++++  |+||...
T Consensus       253 ~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         253 TRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             cccCCCCHHHHhcCCCCCCC
Confidence            3  37899999  7787643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.93  E-value=4.4e-26  Score=167.33  Aligned_cols=147  Identities=19%  Similarity=0.276  Sum_probs=117.4

Q ss_pred             ccccchhhhhhhhc-----ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRN-----KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh-----~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      .++.+++.++.++|     +.+++|+|+||        +||+++.++.+|++|||++........  ......++..|++
T Consensus       109 ~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p--------~nili~~~~~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~  178 (265)
T cd08217         109 RILTQLLLALYECHNRSDPGNTVLHRDLKP--------ANIFLDANNNVKLGDFGLAKILGHDSS--FAKTYVGTPYYMS  178 (265)
T ss_pred             HHHHHHHHHHHHHhcCccccCcceecCCCH--------HHEEEecCCCEEEecccccccccCCcc--cccccccCCCccC
Confidence            35678899999999     99999999999        999999999999999999877644321  1223456778999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||.+.+...+.++|+|++|+++++++  .|..||...........+.....      .......+.++.+++.+||..+|
T Consensus       179 pE~~~~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~p  250 (265)
T cd08217         179 PEQLNHMSYDEKSDIWSLGCLIYELC--ALSPPFTARNQLQLASKIKEGKF------RRIPYRYSSELNEVIKSMLNVDP  250 (265)
T ss_pred             hhhhcCCCCCchhHHHHHHHHHHHHH--HCCCcccCcCHHHHHHHHhcCCC------CCCccccCHHHHHHHHHHccCCc
Confidence            99998888899999999999999999  56788887765555544432211      11224567899999999999999


Q ss_pred             CCCCCHHHHH
Q psy4332         163 TERPSFTEIH  172 (188)
Q Consensus       163 ~~Rps~~el~  172 (188)
                      ++||++.+++
T Consensus       251 ~~Rp~~~~il  260 (265)
T cd08217         251 DKRPSTEELL  260 (265)
T ss_pred             ccCCCHHHHh
Confidence            9999999994

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.93  E-value=7.6e-26  Score=165.70  Aligned_cols=147  Identities=20%  Similarity=0.299  Sum_probs=117.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+.|++|+|++|        +||+++.++.+||+|||++........  ......+++.|++||.+.+
T Consensus       106 ~~~~l~~~l~~lh~~~i~h~dl~p--------~ni~~~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~  175 (256)
T cd08221         106 YLFQIVSAVSYIHKAGILHRDIKT--------LNIFLTKAGLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQG  175 (256)
T ss_pred             HHHHHHHHHHHHHhCCccccCCCh--------HhEEEeCCCCEEECcCcceEEcccccc--cccccCCCccccCHhhcCC
Confidence            456788999999999999999999        999999999999999998776543321  2234457788999999987


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++++++  .+..||......+....+.....      .......+.++.+++.+||..+|++||++
T Consensus       176 ~~~~~~~Dv~slG~i~~~l~--~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~R~s~  247 (256)
T cd08221         176 VKYNFKSDIWALGCVLYELL--TLKRTFDATNPLNLVVKIVQGNY------TPVVSVYSSELISLVHSLLQQDPEKRPTA  247 (256)
T ss_pred             CCCCCcchhHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHcCCC------CCCccccCHHHHHHHHHHcccCcccCCCH
Confidence            77889999999999999999  45678887766666555543211      11124567899999999999999999999


Q ss_pred             HHHHH
Q psy4332         169 TEIHL  173 (188)
Q Consensus       169 ~el~~  173 (188)
                      +++..
T Consensus       248 ~~ll~  252 (256)
T cd08221         248 DEVLD  252 (256)
T ss_pred             HHHhh
Confidence            99854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=8e-26  Score=166.06  Aligned_cols=155  Identities=22%  Similarity=0.348  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|+ +|++|+|++|        +||+++.++.++|+|||++........  ......++..|++||.+
T Consensus       103 ~~~~~l~~~l~~lh~~~~~~H~~l~~--------~ni~~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~pE~~  172 (264)
T cd06623         103 YIARQILKGLDYLHTKRHIIHRDIKP--------SNLLINSKGEVKIADFGISKVLENTLD--QCNTFVGTVTYMSPERI  172 (264)
T ss_pred             HHHHHHHHHHHHHhccCCCccCCCCH--------HHEEECCCCCEEEccCccceecccCCC--cccceeecccccCHhhh
Confidence            456788999999999 9999999999        999999999999999998876643321  11233466789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+...+.++|+|+||+++|+++  +|..||....   ..+....+...     .....+....+..+.+++.+||..+|+
T Consensus       173 ~~~~~~~~~Dv~slG~il~~l~--tg~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         173 QGESYSYAADIWSLGLTLLECA--LGKFPFLPPGQPSFFELMQAICDG-----PPPSLPAEEFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             CCCCCCchhhHHHHHHHHHHHH--hCCCCCccccccCHHHHHHHHhcC-----CCCCCCcccCCHHHHHHHHHHccCChh
Confidence            8888899999999999999999  5678887763   33333333311     111112222678999999999999999


Q ss_pred             CCCCHHHH--HHHHHhcc
Q psy4332         164 ERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~  179 (188)
                      +||++.++  ++|+++.+
T Consensus       246 ~R~~~~~ll~~~~~~~~~  263 (264)
T cd06623         246 KRPSAAELLQHPFIKKAD  263 (264)
T ss_pred             hCCCHHHHHhCHHHHhcc
Confidence            99999999  78888764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=2.4e-26  Score=169.69  Aligned_cols=149  Identities=19%  Similarity=0.275  Sum_probs=114.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+++.++.++|++|++|+|+||        .||+++.++ .++++|||++......      ....++..|+|||++
T Consensus       113 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~nil~~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~  178 (267)
T PHA03390        113 KIIRQLVEALNDLHKHNIIHNDIKL--------ENVLYDRAKDRIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKI  178 (267)
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCH--------HHEEEeCCCCeEEEecCccceecCCC------ccCCCCCcccChhhh
Confidence            4677899999999999999999999        999999988 9999999987665322      223467789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHH-HHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV-LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      .+..++.++|+||+|+++++++  .|..||........ ...+... .  .. ........+..+.+++.+||+.+|.+|
T Consensus       179 ~~~~~~~~~DvwslG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~li~~~l~~~p~~R  252 (267)
T PHA03390        179 KGHNYDVSFDWWAVGVLTYELL--TGKHPFKEDEDEELDLESLLKR-Q--QK-KLPFIKNVSKNANDFVQSMLKYNINYR  252 (267)
T ss_pred             cCCCCCchhhHHHHHHHHHHHH--HCCCCCCCCCcchhhHHHHHHh-h--cc-cCCcccccCHHHHHHHHHHhccChhhC
Confidence            8888899999999999999999  46788875543221 1111111 1  11 111223578899999999999999999


Q ss_pred             CC-HHHH--HHHHH
Q psy4332         166 PS-FTEI--HLFLQ  176 (188)
Q Consensus       166 ps-~~el--~~~l~  176 (188)
                      |+ ++++  |+||+
T Consensus       253 ~~~~~~~l~h~~~~  266 (267)
T PHA03390        253 LTNYNEIIKHPFLK  266 (267)
T ss_pred             CchHHHHhcCCccc
Confidence            95 6998  67764

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=2.3e-26  Score=170.86  Aligned_cols=152  Identities=22%  Similarity=0.254  Sum_probs=110.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++|++|+|++|        .||+++.++.+|++|||++.......  .......++..|++||.+.
T Consensus       104 ~~~~~i~~~l~~lh~~~i~H~~l~p--------~nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  173 (284)
T cd07860         104 SYLFQLLQGLAFCHSHRVLHRDLKP--------QNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILL  173 (284)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCCEEEeeccchhhcccCc--cccccccccccccCCeEEe
Confidence            3466788999999999999999999        99999999999999999876553321  1122334567899999886


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC----------------------cccCCCC
Q psy4332          88 LRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE----------------------FIYLPTP  144 (188)
Q Consensus        88 ~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~  144 (188)
                      +.. .+.++|+||+|+++|+++|  |..||.+........++.........                      ......+
T Consensus       174 ~~~~~~~~~Dv~slG~il~~l~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd07860         174 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVP  251 (284)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcc
Confidence            544 5788999999999999995  56788766544333332211110000                      0000012


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      ..+.++.+++.+||..||++||+++++
T Consensus       252 ~~~~~~~~li~~~l~~~P~~Rpt~~~~  278 (284)
T cd07860         252 PLDEDGRDLLSQMLHYDPNKRISAKAA  278 (284)
T ss_pred             cCCHHHHHHHHHhcCCCcccCCCHHHH
Confidence            356788999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.93  E-value=3.5e-26  Score=168.65  Aligned_cols=148  Identities=18%  Similarity=0.276  Sum_probs=108.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ++.+++.++.|+|++||+|+|+||        .||+++. ++.++|+|||++........  ......++..|++||.+.
T Consensus       113 ~~~qi~~al~~lH~~~i~h~dl~p--------~nil~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~  182 (268)
T cd06624         113 YTKQILEGLKYLHDNQIVHRDIKG--------DNVLVNTYSGVVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVID  182 (268)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCH--------HHEEEcCCCCeEEEecchhheecccCCC--ccccCCCCccccChhhhc
Confidence            456899999999999999999999        9999976 67899999998776533221  122334677899999986


Q ss_pred             cCC--CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRK--FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~--~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ...  ++.++|+||+|+++++++  .|..||................   ... .......++++.+++.+||..+|++|
T Consensus       183 ~~~~~~~~~~Dv~slGvvl~~l~--~g~~p~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~li~~~l~~~p~~R  256 (268)
T cd06624         183 KGPRGYGAPADIWSLGCTIVEMA--TGKPPFIELGEPQAAMFKVGMF---KIH-PEIPESLSAEAKNFILRCFEPDPDKR  256 (268)
T ss_pred             cccccCCchhhhHHHHHHHHHHH--hCCCCCccccChhhhHhhhhhh---ccC-CCCCcccCHHHHHHHHHHcCCCchhC
Confidence            543  678999999999999999  5678887643222111111000   011 11123467789999999999999999


Q ss_pred             CCHHHHH
Q psy4332         166 PSFTEIH  172 (188)
Q Consensus       166 ps~~el~  172 (188)
                      |++++++
T Consensus       257 pt~~~ll  263 (268)
T cd06624         257 ASAHDLL  263 (268)
T ss_pred             CCHHHHH
Confidence            9999983

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.93  E-value=5.5e-26  Score=173.32  Aligned_cols=163  Identities=17%  Similarity=0.190  Sum_probs=115.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~   85 (188)
                      ..+.+++.|+.|+|++||+|+||||        .||+++. ++.++++|||++.......... ......++..|+|||.
T Consensus       118 ~~~~qi~~aL~~LH~~givH~dikp--------~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  189 (342)
T cd07854         118 LFMYQLLRGLKYIHSANVLHRDLKP--------ANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRL  189 (342)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHH
Confidence            4567899999999999999999999        9999974 5678999999987653221111 1122345778999998


Q ss_pred             hhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC----------------------CC-CcccC
Q psy4332          86 VRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD----------------------DG-EFIYL  141 (188)
Q Consensus        86 ~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~----------------------~~-~~~~~  141 (188)
                      +.+ ..++.++||||+|+++++++  +|..||.+..+.+...........                      .. .....
T Consensus       190 ~~~~~~~~~~~DiwSlGvil~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (342)
T cd07854         190 LLSPNNYTKAIDMWAAGCIFAEML--TGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRD  267 (342)
T ss_pred             HhCccccCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHH
Confidence            754 45778999999999999999  567898776544433322211000                      00 00000


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ..+..+.++.+++.+||..||++||+++++  |+||+....
T Consensus       268 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~  308 (342)
T cd07854         268 LLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSC  308 (342)
T ss_pred             HccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccC
Confidence            123467789999999999999999999999  789986543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.93  E-value=4.5e-26  Score=188.18  Aligned_cols=156  Identities=18%  Similarity=0.170  Sum_probs=115.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc----------------ccccC
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY----------------YRVHD   72 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~----------------~~~~~   72 (188)
                      ++.+++.|+.|+|++||+||||||        +||+++.++.++|+|||++........                .....
T Consensus       118 I~~QIa~AL~yLHs~GIIHRDLKP--------eNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g  189 (932)
T PRK13184        118 IFHKICATIEYVHSKGVLHRDLKP--------DNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPG  189 (932)
T ss_pred             HHHHHHHHHHHHHHCCccccCCch--------heEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCC
Confidence            456888999999999999999999        999999999999999999876521100                00112


Q ss_pred             CCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHH
Q psy4332          73 NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD  152 (188)
Q Consensus        73 ~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (188)
                      ...||+.|+|||.+.+..++.++||||+||++++++  +|..||............. .   .......+....+..+.+
T Consensus       190 ~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELL--TG~~PF~~~~~~ki~~~~~-i---~~P~~~~p~~~iP~~L~~  263 (932)
T PRK13184        190 KIVGTPDYMAPERLLGVPASESTDIYALGVILYQML--TLSFPYRRKKGRKISYRDV-I---LSPIEVAPYREIPPFLSQ  263 (932)
T ss_pred             CCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHH--HCCCCCCCcchhhhhhhhh-c---cChhhccccccCCHHHHH
Confidence            245889999999999888999999999999999999  5678997755433322111 0   111111223456788999


Q ss_pred             HHHHHhccCCCCCCC-HHHHHHHHHhc
Q psy4332         153 LMNECWKRSPTERPS-FTEIHLFLQRK  178 (188)
Q Consensus       153 li~~cl~~dp~~Rps-~~el~~~l~~~  178 (188)
                      ++.+|+..||++|++ ++++...|++.
T Consensus       264 LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999975 66666555544

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=3.3e-26  Score=169.86  Aligned_cols=160  Identities=31%  Similarity=0.493  Sum_probs=116.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.++.|+|++|++|+|+||        .||+++.++.++++|||.+......... .......++..|++||.
T Consensus       112 ~~~~~~l~~aL~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~  183 (284)
T cd05038         112 LLFSSQICKGMDYLGSQRYIHRDLAA--------RNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPEC  183 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCH--------HhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHH
Confidence            34677899999999999999999999        9999999999999999998776533221 11112234456999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-----------HHHHhhcccCCCCCcccCCCCCChHHHHHHH
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-----------VLENISHLHADDGEFIYLPTPQTTKDILDLM  154 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  154 (188)
                      +.+..++.++|+||+|+++++++|  |..|+.......           ....+...... ... ......++.++.+++
T Consensus       184 ~~~~~~~~~~Di~slG~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~li  259 (284)
T cd05038         184 LRTSKFSSASDVWSFGVTLYELFT--YGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE-GER-LPRPPSCPDEVYDLM  259 (284)
T ss_pred             HccCCCCcccchHHHhhhhheeec--cCCCcccccchhccccccccccccHHHHHHHHHc-CCc-CCCCccCCHHHHHHH
Confidence            988888999999999999999995  456665432111           01111111100 111 112234568899999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         155 NECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       155 ~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      .+||..+|++||++.|+.+.|+++
T Consensus       260 ~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         260 KLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHhccChhhCCCHHHHHHHHhhc
Confidence            999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.93  E-value=3.7e-26  Score=169.69  Aligned_cols=153  Identities=20%  Similarity=0.253  Sum_probs=112.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|+++++|+|++|        .||+++.++.++|+|||++.......  .......++..|+|||.+.
T Consensus       103 ~~~~~i~~~L~~lH~~~~~H~dl~p--------~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~  172 (283)
T cd07835         103 SYLYQLLQGIAYCHSHRVLHRDLKP--------QNLLIDREGALKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILL  172 (283)
T ss_pred             HHHHHHHHHHHHHHHCCeeCCCCCH--------HHEEEcCCCcEEEeecccccccCCCc--cccCccccccCCCCCceee
Confidence            3567889999999999999999999        99999999999999999986553221  1122334567899999886


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC----------------------CcccCCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG----------------------EFIYLPTP  144 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~  144 (188)
                      +. .++.++|+||+|+++|+++  +|..||...........+........                      .......+
T Consensus       173 ~~~~~~~~~Di~slG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (283)
T cd07835         173 GSRQYSTPVDIWSIGCIFAEMV--NRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVP  250 (283)
T ss_pred             cCcccCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcC
Confidence            54 4688999999999999999  55788877655433332221110000                      00001123


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ..+.++.+++.+||+.+|++||+++|+.
T Consensus       251 ~~~~~~~~li~~~l~~~P~~Rpt~~~il  278 (283)
T cd07835         251 NLDEDGLDLLSKMLVYDPAKRISAKAAL  278 (283)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence            4567899999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=7.6e-26  Score=166.09  Aligned_cols=145  Identities=27%  Similarity=0.412  Sum_probs=108.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce--------EEEccCCCCccCCCCccccccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE--------IKISDFATDSDMFSSDYYRVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~   79 (188)
                      ..+.+++.++.|+|++||+|+|+||        .||+++.++.        ++++|||++......      ....++..
T Consensus       104 ~~~~qi~~~l~~lH~~~iiH~dlkp--------~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~  169 (258)
T cd05078         104 EVAKQLAWALHFLEDKGLTHGNVCA--------KNVLLIREEDRKTGNPPFIKLSDPGISITVLPK------EILLERIP  169 (258)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCcc--------ceEEEecccccccCCCceEEecccccccccCCc------hhccccCC
Confidence            3567899999999999999999999        8888876654        699999987654321      22345677


Q ss_pred             ccchhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          80 WMAWESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        80 ~~~Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      |++||++.+. .++.++|+||+|+++|+++++ +..||..............       .... ....+.++.+++.+||
T Consensus       170 y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g-~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~li~~~l  240 (258)
T cd05078         170 WVPPECIENPQNLSLAADKWSFGTTLWEIFSG-GDKPLSALDSQKKLQFYED-------RHQL-PAPKWTELANLINQCM  240 (258)
T ss_pred             ccCchhccCCCCCCchhhHHHHHHHHHHHHcC-CCCChhhccHHHHHHHHHc-------cccC-CCCCcHHHHHHHHHHh
Confidence            9999999763 478899999999999999953 3567666554433222111       0011 1234568999999999


Q ss_pred             ccCCCCCCCHHHHHHHH
Q psy4332         159 KRSPTERPSFTEIHLFL  175 (188)
Q Consensus       159 ~~dp~~Rps~~el~~~l  175 (188)
                      +.||++||+++++++.|
T Consensus       241 ~~~p~~Rps~~~il~~l  257 (258)
T cd05078         241 DYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             ccChhhCCCHHHHHHhc
Confidence            99999999999997765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=1.2e-25  Score=166.71  Aligned_cols=153  Identities=22%  Similarity=0.337  Sum_probs=120.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++|++|+|+||        .||+++.++.++++|||++.......  .......++..|++||.+.
T Consensus       105 ~~~~~l~~~l~~lh~~~i~h~dl~p--------~Ni~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~  174 (277)
T cd06641         105 TILREILKGLDYLHSEKKIHRDIKA--------ANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIK  174 (277)
T ss_pred             HHHHHHHHHHHHHccCCeecCCCCH--------HhEEECCCCCEEEeecccceecccch--hhhccccCCccccChhhhc
Confidence            4567888999999999999999999        99999999999999999877654322  1122345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||...........+....     . .......+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~Dv~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  246 (277)
T cd06641         175 QSAYDSKADIWSLGITAIELA--KGEPPHSELHPMKVLFLIPKNN-----P-PTLEGNYSKPLKEFVEACLNKEPSFRPT  246 (277)
T ss_pred             cCCCCchhhHHHHHHHHHHHH--cCCCCCCccchHHHHHHHhcCC-----C-CCCCcccCHHHHHHHHHHccCChhhCcC
Confidence            778889999999999999999  5678998776555444432211     1 1122345788999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      +.++  |++|.+.
T Consensus       247 ~~~~l~~~~~~~~  259 (277)
T cd06641         247 AKELLKHKFIVRF  259 (277)
T ss_pred             HHHHHhCHHHhhh
Confidence            9999  6677643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=7.7e-26  Score=166.22  Aligned_cols=149  Identities=19%  Similarity=0.308  Sum_probs=112.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccc--cCCCCCCccccchhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV--HDNTSLPIRWMAWESV   86 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~Pe~~   86 (188)
                      ++.+++.++.|+|++||+|+|++|        +||+++.++.+||+|||++...........  .....++..|++||.+
T Consensus       104 i~~~i~~~l~~lh~~~i~H~dl~~--------~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~  175 (264)
T cd06626         104 YTLQLLEGLAYLHSHGIVHRDIKP--------ANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI  175 (264)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhc
Confidence            567889999999999999999999        999999999999999999877644322111  1134467789999999


Q ss_pred             hcCC---CCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          87 RLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        87 ~~~~---~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .+..   .+.++|||++|+++++++  .|..||.+... ......+..    ............+..+.+++.+||..+|
T Consensus       176 ~~~~~~~~~~~~Dv~s~G~il~~l~--~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p  249 (264)
T cd06626         176 TGGKGKGHGRAADIWSLGCVVLEMA--TGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLSPEGKDFLDRCLESDP  249 (264)
T ss_pred             cCCCCCCCCcccchHHHHHHHHHHH--hCCCCccCCcchHHHHHHHhc----CCCCCCCcccccCHHHHHHHHHHccCCc
Confidence            8665   788999999999999999  56789876532 222222221    1111112223347789999999999999


Q ss_pred             CCCCCHHHH
Q psy4332         163 TERPSFTEI  171 (188)
Q Consensus       163 ~~Rps~~el  171 (188)
                      .+||++.++
T Consensus       250 ~~R~~~~~i  258 (264)
T cd06626         250 KKRPTASEL  258 (264)
T ss_pred             ccCCCHHHH
Confidence            999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.93  E-value=4.7e-26  Score=171.13  Aligned_cols=154  Identities=19%  Similarity=0.194  Sum_probs=111.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc---------ccCCCCCCc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR---------VHDNTSLPI   78 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~   78 (188)
                      .++.+++.++.|+|++||+|+|+||        +||+++.++.++|+|||++..........         ......+++
T Consensus       119 ~i~~~l~~al~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (311)
T cd07866         119 CYMLQLLEGINYLHENHILHRDIKA--------ANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTR  190 (311)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceecc
Confidence            3567889999999999999999999        99999999999999999887654322111         112234567


Q ss_pred             cccchhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-----------------c
Q psy4332          79 RWMAWESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-----------------Y  140 (188)
Q Consensus        79 ~~~~Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------~  140 (188)
                      .|+|||.+.+. .++.++||||+|+++|+++  .|..||.+.......+.+...........                 .
T Consensus       191 ~y~aPE~~~~~~~~~~~~Dv~slG~il~el~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (311)
T cd07866         191 WYRPPELLLGERRYTTAVDIWGIGCVFAEMF--TRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTN  268 (311)
T ss_pred             CcCChHHhhCCCccCchhHhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCC
Confidence            79999988654 4788999999999999999  56788887765554444332111000000                 0


Q ss_pred             ------CCCCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         141 ------LPTPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       141 ------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                            .........+.+++.+||..||++||++.++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el  305 (311)
T cd07866         269 YPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA  305 (311)
T ss_pred             CCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence                  0012234678899999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.93  E-value=3.7e-26  Score=170.49  Aligned_cols=152  Identities=18%  Similarity=0.216  Sum_probs=108.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++........  ......++..|++||.+.
T Consensus       107 ~~~~qi~~~L~~lH~~~i~H~dlkp--------~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  176 (291)
T cd07870         107 LFMFQLLRGLAYIHGQHILHRDLKP--------QNLLISYLGELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLL  176 (291)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCh--------HHEEEcCCCcEEEeccccccccCCCCC--CCCCccccccccCCceee
Confidence            3567889999999999999999999        999999999999999998865433221  122334577899999987


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCC---------------CCccc----------
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADD---------------GEFIY----------  140 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~---------------~~~~~----------  140 (188)
                      +. .++.++|+||+|+++++++  +|..||.+.... +...+.......+               .....          
T Consensus       177 ~~~~~~~~~Dv~slG~~l~~l~--~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (291)
T cd07870         177 GATDYSSALDIWGAGCIFIEML--QGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVV  254 (291)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhh
Confidence            53 4788999999999999999  567788765431 2222211100000               00000          


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      ...-..+.++.+++.+|+..||++|||++|+
T Consensus       255 ~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~  285 (291)
T cd07870         255 WKRLSRPPKAEDLASQMLMMFPKDRISAQDA  285 (291)
T ss_pred             ccccCCChHHHHHHHHHhCcCcccCcCHHHH
Confidence            0001125678999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=4e-26  Score=169.81  Aligned_cols=153  Identities=20%  Similarity=0.252  Sum_probs=112.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++++|+|++|        +||+++.++.+||+|||++........ .......++..|+|||.+.+
T Consensus       105 ~~~~i~~~l~~LH~~~i~H~dl~~--------~ni~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~  175 (288)
T cd07833         105 YIWQLLQAIAYCHSHNIIHRDIKP--------ENILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVG  175 (288)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCH--------HHeEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcC
Confidence            466889999999999999999999        999999999999999999876644322 12223445677999999987


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC---------------C-Cc---------ccCC
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD---------------G-EF---------IYLP  142 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~---------------~-~~---------~~~~  142 (188)
                      . .++.++|+||+|+++++++  .|..||.+....+....+.......               . ..         ....
T Consensus       176 ~~~~~~~~Dv~slG~~l~~l~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (288)
T cd07833         176 DTNYGKPVDVWAIGCIMAELL--DGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRY  253 (288)
T ss_pred             CCCcCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhc
Confidence            7 7889999999999999999  5567887665433222211100000               0 00         0011


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ...++.++.+++.+||..+|++||++++++
T Consensus       254 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il  283 (288)
T cd07833         254 PGKVSSPALDFLKACLRMDPKERLTCDELL  283 (288)
T ss_pred             CCccchHHHHHHHHHhccCchhcccHHHHh
Confidence            123478899999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=9.5e-26  Score=167.86  Aligned_cols=155  Identities=23%  Similarity=0.348  Sum_probs=120.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++||+|+|++|        .||+++.++.++|+|||++........  ......++..|++||.+.
T Consensus       120 ~i~~~i~~~L~~lH~~gi~H~dl~p--------~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~  189 (286)
T cd06614         120 YVCREVLQGLEYLHSQNVIHRDIKS--------DNILLSKDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIK  189 (286)
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCh--------hhEEEcCCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhc
Confidence            3677889999999999999999999        999999999999999998765533221  112334667899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+++  +|..||....+......+....    .........++..+.+++.+||+.+|.+||+
T Consensus       190 ~~~~~~~~Dv~slGvil~~l~--~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  263 (286)
T cd06614         190 RKDYGPKVDIWSLGIMCIEMA--EGEPPYLREPPLRALFLITTKG----IPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS  263 (286)
T ss_pred             CCCCCCccccHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhcC----CCCCcchhhCCHHHHHHHHHHhccChhhCcC
Confidence            888899999999999999999  5678888776554444333211    1111112236788999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      +.++  ++++++.
T Consensus       264 ~~~il~~~~~~~~  276 (286)
T cd06614         264 AEELLQHPFLKKA  276 (286)
T ss_pred             HHHHhhChHhhcc
Confidence            9999  6788873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=6.7e-26  Score=165.83  Aligned_cols=146  Identities=19%  Similarity=0.266  Sum_probs=113.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.+ +.++++|||++.......   ......++..|++||.+
T Consensus       105 ~~~~~i~~~l~~lh~~~i~h~dl~~--------~nil~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~  173 (256)
T cd08220         105 HFFVQILLALHHVHTKLILHRDLKT--------QNILLDKHKMVVKIGDFGISKILSSKS---KAYTVVGTPCYISPELC  173 (256)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEEccCCCceecCCCc---cccccccCCcccCchhc
Confidence            3456888999999999999999999        99999754 568999999987664332   11234467789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+...+.++|+||+|+++++++  ++..||.+.........+.....      .......+.++.+++.+||..+|++||
T Consensus       174 ~~~~~~~~~Dv~slG~~l~~l~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rp  245 (256)
T cd08220         174 EGKPYNQKSDIWALGCVLYELA--SLKRAFEAANLPALVLKIMSGTF------APISDRYSPDLRQLILSMLNLDPSKRP  245 (256)
T ss_pred             cCCCCCcccchHHHHHHHHHHH--hCCCCcccCchHHHHHHHHhcCC------CCCCCCcCHHHHHHHHHHccCChhhCC
Confidence            8888889999999999999999  55788887765555544432111      111234677999999999999999999


Q ss_pred             CHHHHH
Q psy4332         167 SFTEIH  172 (188)
Q Consensus       167 s~~el~  172 (188)
                      ++.|+.
T Consensus       246 t~~~ll  251 (256)
T cd08220         246 QLSQIM  251 (256)
T ss_pred             CHHHHh
Confidence            999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.93  E-value=1.7e-26  Score=175.43  Aligned_cols=156  Identities=15%  Similarity=0.220  Sum_probs=116.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......|++.|+|||.+.+
T Consensus       107 ~~~qi~~~L~~lH~~~iiHrDlkp--------~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         107 YIAEMVLAIHSIHQLHYVHRDIKP--------DNVLLDMNGHIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCch--------HHEEEcCCCCEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhc
Confidence            456888999999999999999999        999999999999999999876543321 11223458889999999875


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           ..++.++|+||+|+++|+++  +|..||.+....+....+........  ........+.++.+++.+|+..+++
T Consensus       178 ~~~~~~~~~~~~DiwSlGvil~ell--~g~~Pf~~~~~~~~~~~i~~~~~~~~--~p~~~~~~~~~~~~li~~ll~~~~~  253 (331)
T cd05624         178 MEDGMGKYGPECDWWSLGVCMYEML--YGETPFYAESLVETYGKIMNHEERFQ--FPSHITDVSEEAKDLIQRLICSRER  253 (331)
T ss_pred             cccCCCCCCCcccEEeeehhhhhhh--hCCCCccCCCHHHHHHHHHcCCCccc--CCCccccCCHHHHHHHHHHccCchh
Confidence                 45778999999999999999  57889988776666655543211111  1111134578999999999986554


Q ss_pred             C--CCCHHHH--HHHHHh
Q psy4332         164 E--RPSFTEI--HLFLQR  177 (188)
Q Consensus       164 ~--Rps~~el--~~~l~~  177 (188)
                      +  |++++++  |+||+.
T Consensus       254 ~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         254 RLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             hcCCCCHHHHhcCCCcCC
Confidence            4  5688888  667654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.93  E-value=5.3e-26  Score=182.65  Aligned_cols=160  Identities=15%  Similarity=0.149  Sum_probs=106.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+++|+||||||        +|||++. ++.+||+|||+++.......+ ......+++.|+|||.+
T Consensus       259 ~i~~qll~aL~yLH~~gIiHRDLKP--------~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~  329 (566)
T PLN03225        259 TIMRQILFALDGLHSTGIVHRDVKP--------QNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQY  329 (566)
T ss_pred             HHHHHHHHHHHHHHHCCEEeCcCCH--------HHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHh
Confidence            3567788999999999999999999        9999985 578999999998765433221 22345578899999976


Q ss_pred             hcC----------------------CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHh-hcccCCC-------C
Q psy4332          87 RLR----------------------KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI-SHLHADD-------G  136 (188)
Q Consensus        87 ~~~----------------------~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~-~~~~~~~-------~  136 (188)
                      ...                      .+..++||||+||++|||++  +..++..  ........ .......       .
T Consensus       330 ~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~--~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~  405 (566)
T PLN03225        330 IMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAF--PNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVE  405 (566)
T ss_pred             hccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHh--CcCCCch--HHHHHHHHHHhcCCcHHHHHHhhc
Confidence            422                      23345699999999999994  3344322  11111111 1000000       0


Q ss_pred             Cccc-------CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         137 EFIY-------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       137 ~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ....       ........+.++|+.+||+.||++|||++++  |+||++...
T Consensus       406 ~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        406 PRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             cccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            0000       0001123356699999999999999999999  899986544

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=1.6e-25  Score=165.92  Aligned_cols=145  Identities=30%  Similarity=0.382  Sum_probs=108.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-------eEEEccCCCCccCCCCccccccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-------EIKISDFATDSDMFSSDYYRVHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~   80 (188)
                      .++.+++.++.|+|++||+|+||||        .||+++..+       .++++|||++......      ....++..|
T Consensus       121 ~i~~qi~~~l~~lH~~~iiH~dlkp--------~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~  186 (274)
T cd05076         121 TVAQQLASALSYLEDKNLVHGNVCA--------KNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPW  186 (274)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCCCc--------ccEEEeccCcccCccceeeecCCccccccccc------cccccCCcc
Confidence            4577899999999999999999999        999886543       4799999986544221      123456679


Q ss_pred             cchhhhhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhc
Q psy4332          81 MAWESVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK  159 (188)
Q Consensus        81 ~~Pe~~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  159 (188)
                      ++||.+.+ ..++.++||||||+++|++++ .+..||......+.........       ..+ .....++.+++.+||+
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~li~~cl~  257 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICF-DGEVPLKERTPSEKERFYEKKH-------RLP-EPSCKELATLISQCLT  257 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCccccChHHHHHHHHhcc-------CCC-CCCChHHHHHHHHHcc
Confidence            99998865 457889999999999999864 4678888765544333221110       111 2234589999999999


Q ss_pred             cCCCCCCCHHHHHHHH
Q psy4332         160 RSPTERPSFTEIHLFL  175 (188)
Q Consensus       160 ~dp~~Rps~~el~~~l  175 (188)
                      .+|++||++.+++..|
T Consensus       258 ~~p~~Rps~~~il~~L  273 (274)
T cd05076         258 YEPTQRPSFRTILRDL  273 (274)
T ss_pred             cChhhCcCHHHHHHhh
Confidence            9999999999997765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.93  E-value=1e-25  Score=165.96  Aligned_cols=148  Identities=18%  Similarity=0.273  Sum_probs=112.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+++.++.++|+++++|+|+||        .||+++.++.++|+|||++......... .......++..|+|||.+
T Consensus       110 ~~~~~l~~~l~~lH~~~i~H~dl~p--------~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (265)
T cd06652         110 KYTRQILEGVSYLHSNMIVHRDIKG--------ANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVI  181 (265)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCH--------HHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhh
Confidence            4577889999999999999999999        9999999999999999988765322111 011233467789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+||||+++|+++  .|..||...............    ... .......+..+.+++.+|+. +|++||
T Consensus       182 ~~~~~~~~~Dv~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~~~l~-~p~~Rp  253 (265)
T cd06652         182 SGEGYGRKADIWSVGCTVVEML--TEKPPWAEFEAMAAIFKIATQ----PTN-PVLPPHVSDHCRDFLKRIFV-EAKLRP  253 (265)
T ss_pred             cCCCCCcchhHHHHHHHHHHHh--hCCCCCCccchHHHHHHHhcC----CCC-CCCchhhCHHHHHHHHHHhc-ChhhCC
Confidence            8888899999999999999999  567898876544444333211    111 11123456789999999995 999999


Q ss_pred             CHHHH
Q psy4332         167 SFTEI  171 (188)
Q Consensus       167 s~~el  171 (188)
                      +++++
T Consensus       254 ~~~~i  258 (265)
T cd06652         254 SADEL  258 (265)
T ss_pred             CHHHH
Confidence            99998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=1e-25  Score=164.99  Aligned_cols=146  Identities=20%  Similarity=0.342  Sum_probs=114.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.++|+.|++|+|++|        +||+++.++.+||+|||++.......   ......++..|++||.+..
T Consensus       107 ~~~~i~~~l~~lH~~~i~H~dl~~--------~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~  175 (258)
T cd06632         107 YTRQILLGLEYLHDRNTVHRDIKG--------ANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQ  175 (258)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcC
Confidence            467889999999999999999999        99999999999999999877654332   1234456778999999876


Q ss_pred             CC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      .. ++.++|+||+|+++++++  .|..||...........+....    .. .......+.++.+++.+||..+|++||+
T Consensus       176 ~~~~~~~~D~~slG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~  248 (258)
T cd06632         176 QGGYGLAADIWSLGCTVLEMA--TGKPPWSQLEGVAAVFKIGRSK----EL-PPIPDHLSDEAKDFILKCLQRDPSLRPT  248 (258)
T ss_pred             CCCCCchhhhHHHHHHHHHHH--hCCCCcccCcHHHHHHHHHhcc----cC-CCcCCCcCHHHHHHHHHHhhcCcccCcC
Confidence            66 889999999999999999  5678987766444443332211    11 1122456788999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.+++
T Consensus       249 ~~~~l  253 (258)
T cd06632         249 AAELL  253 (258)
T ss_pred             HHHHh
Confidence            99983

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=1.2e-25  Score=164.62  Aligned_cols=147  Identities=22%  Similarity=0.348  Sum_probs=114.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+++++|+|+||        .||+++.++ .++++|||.+........  ......++..|+|||.+
T Consensus       105 ~~~~~l~~~l~~lh~~~i~H~dl~~--------~nil~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~  174 (257)
T cd08225         105 SWFVQISLGLKHIHDRKILHRDIKS--------QNIFLSKNGMVAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEIC  174 (257)
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCH--------HHEEEcCCCCeEEecccccchhccCCcc--cccccCCCccccCHHHH
Confidence            3466888999999999999999999        999998875 469999998876643321  11234577789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+||+|+++++++  .+..||......+....+....     . ....+..+.++.+++.+||..+|++||
T Consensus       175 ~~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp  246 (257)
T cd08225         175 QNRPYNNKTDIWSLGCVLYELC--TLKHPFEGNNLHQLVLKICQGY-----F-APISPNFSRDLRSLISQLFKVSPRDRP  246 (257)
T ss_pred             cCCCCCchhhHHHHHHHHHHHH--hCCCCCCCccHHHHHHHHhccc-----C-CCCCCCCCHHHHHHHHHHhccChhhCc
Confidence            8888899999999999999999  5678888766555544433211     1 112245678999999999999999999


Q ss_pred             CHHHHH
Q psy4332         167 SFTEIH  172 (188)
Q Consensus       167 s~~el~  172 (188)
                      ++.++.
T Consensus       247 t~~~ll  252 (257)
T cd08225         247 SITSIL  252 (257)
T ss_pred             CHHHHh
Confidence            999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.93  E-value=5.9e-26  Score=171.01  Aligned_cols=154  Identities=21%  Similarity=0.183  Sum_probs=109.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC----cceEEEccCCCCccCCCCcc-ccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK----KFEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~----~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~   82 (188)
                      .++.+++.++.|+|+++|+|+||||        +||+++.    ++.+|++|||++........ ........++..|+|
T Consensus       112 ~i~~qi~~~l~~lH~~~i~h~dlkp--------~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  183 (316)
T cd07842         112 SLLWQILNGVHYLHSNWVLHRDLKP--------ANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRA  183 (316)
T ss_pred             HHHHHHHHHHHHHHhCCEeeCCCCH--------HHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccC
Confidence            3567889999999999999999999        9999999    89999999999876643322 111223456778999


Q ss_pred             hhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH---------HHHHhhcccCCC---------------C-
Q psy4332          83 WESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE---------VLENISHLHADD---------------G-  136 (188)
Q Consensus        83 Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~---------~~~~~~~~~~~~---------------~-  136 (188)
                      ||.+.+. .++.++|+||+|+++++++  ++..||.+.....         ....+.......               . 
T Consensus       184 PE~~~~~~~~~~~~Dv~slG~~l~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  261 (316)
T cd07842         184 PELLLGARHYTKAIDIWAIGCIFAELL--TLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTL  261 (316)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHH--hcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhh
Confidence            9988754 4788999999999999999  5567887543211         111111000000               0 


Q ss_pred             --CcccCCC------------CCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332         137 --EFIYLPT------------PQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       137 --~~~~~~~------------~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                        .......            ...+.++.+++.+||+.||++|||+.|+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei  310 (316)
T cd07842         262 MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA  310 (316)
T ss_pred             hhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence              0000000            1445689999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=8.6e-26  Score=167.47  Aligned_cols=156  Identities=18%  Similarity=0.251  Sum_probs=114.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.++.++|++||+|+|++|        +||+++.++.++|+|||++........  .......+..|+|||.+
T Consensus       101 ~~~~~~i~~~l~~LH~~~i~H~~l~~--------~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~  170 (282)
T cd07829         101 KSIMYQLLRGLAYCHSHRILHRDLKP--------QNILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEIL  170 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCh--------heEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHh
Confidence            34567889999999999999999999        999999999999999998876543321  12233345679999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC------------------CC----cccCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD------------------GE----FIYLPT  143 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~------------------~~----~~~~~~  143 (188)
                      .+. ..+.++|+|++|+++++++  .+..||.+....+....+.......                  ..    ......
T Consensus       171 ~~~~~~~~~~Dv~slG~~l~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (282)
T cd07829         171 LGSKHYSTAVDIWSVGCIFAEMI--TGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVL  248 (282)
T ss_pred             cCCcCCCccccHHHHHHHHHHHH--hCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhc
Confidence            766 6788999999999999999  4578887765444333322111000                  00    000111


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLF  174 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~  174 (188)
                      +..+..+.+++.+||+.+|++||+++++  ++|
T Consensus       249 ~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~  281 (282)
T cd07829         249 PRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY  281 (282)
T ss_pred             ccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence            2346789999999999999999999998  444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.93  E-value=1.6e-25  Score=168.16  Aligned_cols=153  Identities=21%  Similarity=0.248  Sum_probs=114.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-------------cccCCCC
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-------------RVHDNTS   75 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~   75 (188)
                      .+.+++.++.|+|++|++|+|+||        .||+++.++.++++|||+++........             .......
T Consensus       106 ~~~~i~~~l~~lH~~~i~H~dl~p--------~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (305)
T cd05609         106 YFAETVLALEYLHNYGIVHRDLKP--------DNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC  177 (305)
T ss_pred             HHHHHHHHHHHHHHCCccccCCch--------HHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCc
Confidence            456788999999999999999999        9999999999999999987632111000             0111234


Q ss_pred             CCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          76 LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        76 ~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      ++..|++||.+.+..++.++|+||+|+++++++  .|..||.+....+..........    .........+.++.+++.
T Consensus       178 ~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~--~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~  251 (305)
T cd05609         178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL--VGCVPFFGDTPEELFGQVISDDI----EWPEGDEALPADAQDLIS  251 (305)
T ss_pred             cCccccCchhccCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhccc----CCCCccccCCHHHHHHHH
Confidence            567899999998888899999999999999999  56789988776666655543211    111112256788999999


Q ss_pred             HHhccCCCCCCCH---HHH--HHHH
Q psy4332         156 ECWKRSPTERPSF---TEI--HLFL  175 (188)
Q Consensus       156 ~cl~~dp~~Rps~---~el--~~~l  175 (188)
                      +||..+|++||++   .++  ++|+
T Consensus       252 ~~l~~~P~~R~~~~~~~~ll~~~~~  276 (305)
T cd05609         252 RLLRQNPLERLGTGGAFEVKQHRFF  276 (305)
T ss_pred             HHhccChhhccCccCHHHHHhCccc
Confidence            9999999999984   444  4444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=7.1e-26  Score=168.37  Aligned_cols=153  Identities=20%  Similarity=0.285  Sum_probs=112.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|||++|++|+|++|        +||+++.++.++++|||++.......  .......++..|++||.+.
T Consensus       104 ~~~~~i~~~l~~LH~~~i~h~~l~p--------~ni~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07846         104 KYLFQILRGIEFCHSHNIIHRDIKP--------ENILVSQSGVVKLCDFGFARTLAAPG--EVYTDYVATRWYRAPELLV  173 (286)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCH--------HHEEECCCCcEEEEeeeeeeeccCCc--cccCcccceeeccCcHHhc
Confidence            3567889999999999999999999        99999999999999999987654332  1222344677899999986


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC--------------------C----CcccCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD--------------------G----EFIYLP  142 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~--------------------~----~~~~~~  142 (188)
                      +. ..+.++||||+|++++++++  |..||.+....+....+.......                    .    ......
T Consensus       174 ~~~~~~~~~Dv~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (286)
T cd07846         174 GDTKYGRAVDIWAVGCLVTEMLT--GEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKR  251 (286)
T ss_pred             cccccCchHhHHHHHHHHHHHHc--CCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHh
Confidence            53 46789999999999999995  567777655444333322110000                    0    000001


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      .+..+..+.+++.+||..+|++||++.+++
T Consensus       252 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il  281 (286)
T cd07846         252 FPKLSGLVLDLAKQCLRIDPDDRPSSSQLL  281 (286)
T ss_pred             CCCcCHHHHHHHHHHhcCCcccchhHHHHh
Confidence            234578899999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.93  E-value=1.4e-25  Score=168.77  Aligned_cols=149  Identities=23%  Similarity=0.346  Sum_probs=114.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|+++++|+|+||        .||+++.++.++++|||++......      ....++..|+|||.+.
T Consensus       119 ~~~~~l~~~l~~LH~~~i~H~dl~p--------~nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~  184 (308)
T cd06634         119 AVTHGALQGLAYLHSHNMIHRDVKA--------GNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVIL  184 (308)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HhEEECCCCcEEECCcccceeecCc------ccccCCccccCHHHHh
Confidence            3456788999999999999999999        9999999999999999987654322      2334667899999975


Q ss_pred             ---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 ---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                         +...+.++||||+|+++++++  .|..||...........+...     ..........+..+.+++.+||..+|++
T Consensus       185 ~~~~~~~~~~~Di~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~P~~  257 (308)
T cd06634         185 AMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQN-----ESPALQSGHWSEYFRNFVDSCLQKIPQD  257 (308)
T ss_pred             hcccCCCCcccchHHHHHHHHHHH--cCCCCCccccHHHHHHHHhhc-----CCCCcCcccccHHHHHHHHHHhhCCccc
Confidence               345788999999999999999  567788776654444433321     1112223356778999999999999999


Q ss_pred             CCCHHHH--HHHHHh
Q psy4332         165 RPSFTEI--HLFLQR  177 (188)
Q Consensus       165 Rps~~el--~~~l~~  177 (188)
                      ||+++++  ++++..
T Consensus       258 Rp~~~~ll~~~~~~~  272 (308)
T cd06634         258 RPTSEVLLKHRFVLR  272 (308)
T ss_pred             CCCHHHHhhCccccc
Confidence            9999999  555443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=1.3e-25  Score=170.68  Aligned_cols=163  Identities=21%  Similarity=0.240  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc------------ccccCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY------------YRVHDNTS   75 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~   75 (188)
                      .++.+++.++.++|++||+|+||+|        .||+++.++.++++|||.+........            ........
T Consensus       123 ~~~~ql~~aL~~LH~~~i~H~dl~~--------~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (335)
T PTZ00024        123 CILLQILNGLNVLHKWYFMHRDLSP--------ANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKV  194 (335)
T ss_pred             HHHHHHHHHHHHHHhCCeecccccH--------HHeEECCCCCEEECCccceeecccccccccccccccccccccccccc
Confidence            3567899999999999999999999        999999999999999998876541110            01112233


Q ss_pred             CCccccchhhhhcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc----------------
Q psy4332          76 LPIRWMAWESVRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF----------------  138 (188)
Q Consensus        76 ~~~~~~~Pe~~~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------  138 (188)
                      ++..|++||.+.+.. .+.++|+||+|+++++++|  |..||.+....+....+..........                
T Consensus       195 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (335)
T PTZ00024        195 VTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT--GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTP  272 (335)
T ss_pred             cccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCc
Confidence            567899999987543 6889999999999999994  678888877665554443211111100                


Q ss_pred             -----ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         139 -----IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       139 -----~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                           ........+.++.+++.+||+.+|++||+++++  |+||+...-
T Consensus       273 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        273 RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             CCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence                 000012346789999999999999999999999  788885533

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.93  E-value=1.1e-25  Score=166.98  Aligned_cols=150  Identities=18%  Similarity=0.216  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|+++|+|+|+||        .||+++.++.++|+|||++.......    .....++..|++||.+.
T Consensus       101 ~~~~ql~~~l~~lH~~~i~H~di~p--------~nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~  168 (278)
T cd05606         101 FYAAEIILGLEHMHNRFVVYRDLKP--------ANILLDEHGHVRISDLGLACDFSKKK----PHASVGTHGYMAPEVLQ  168 (278)
T ss_pred             HHHHHHHHHHHHHHHCCEEcCCCCH--------HHEEECCCCCEEEccCcCccccCccC----CcCcCCCcCCcCcHHhc
Confidence            3567888999999999999999999        99999999999999999987553321    12345778899999987


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH---HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      ++ .++.++|+||+|+++++++  .|..||.+...   .........      .... .....+.++.+++.+|+..+|+
T Consensus       169 ~~~~~~~~~Di~s~G~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~------~~~~-~~~~~s~~~~~li~~~l~~~p~  239 (278)
T cd05606         169 KGVAYDSSADWFSLGCMLFKLL--RGHSPFRQHKTKDKHEIDRMTLT------MAVE-LPDSFSPELRSLLEGLLQRDVN  239 (278)
T ss_pred             CCCCCCcccchHhHHHHHHHHH--hCCCCCCCCCccchHHHHHHhhc------cCCC-CCCcCCHHHHHHHHHHhhcCHH
Confidence            54 5788999999999999999  56789876532   222211111      0111 1234578999999999999999


Q ss_pred             CCC-----CHHHH--HHHHHhc
Q psy4332         164 ERP-----SFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rp-----s~~el--~~~l~~~  178 (188)
                      +||     ++.++  ++|+.+.
T Consensus       240 ~R~~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         240 RRLGCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             hccCCCCCCHHHHHhCccccCC
Confidence            999     99999  6777655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.93  E-value=9.8e-26  Score=171.02  Aligned_cols=163  Identities=16%  Similarity=0.245  Sum_probs=113.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-----ccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-----VHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~   82 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++++||+.+..........     ......++..|++
T Consensus       105 ~~~~qi~~aL~~lH~~~ivHrDlkp--------~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (328)
T cd08226         105 NILFGALRGLNYLHQNGYIHRNIKA--------SHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS  176 (328)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccC
Confidence            4567889999999999999999999        99999999999999997543222111000     0111224456999


Q ss_pred             hhhhhcC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC------------------------
Q psy4332          83 WESVRLR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG------------------------  136 (188)
Q Consensus        83 Pe~~~~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------  136 (188)
                      ||++.+.  .++.++||||+|+++++++  .|..||.+..................                        
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~~l~el~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (328)
T cd08226         177 PELLRQDLYGYNVKSDIYSVGITACELA--TGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGI  254 (328)
T ss_pred             hhhhcCCCCCCCchhhHHHHHHHHHHHH--hCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccc
Confidence            9999753  4688999999999999999  56789887654333222111100000                        


Q ss_pred             ----------------CcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         137 ----------------EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       137 ----------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                                      .........++.++.+++++||..||++|||+.|+  |+||+++..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         255 GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence                            00000112346789999999999999999999999  889987754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=8.8e-26  Score=167.72  Aligned_cols=154  Identities=21%  Similarity=0.247  Sum_probs=113.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.++|++|++|+|+||        .||+++.++.++++|||++........ .......++..|++||.+.
T Consensus       104 ~i~~~i~~al~~LH~~~~~h~dl~p--------~nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~  174 (287)
T cd07840         104 CYMKQLLEGLQYLHSNGILHRDIKG--------SNILINNDGVLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLL  174 (287)
T ss_pred             HHHHHHHHHHHHHHHCCceeccCcH--------HHeEEcCCCCEEEccccceeeccCCCc-ccccccccccccCCceeeE
Confidence            4567889999999999999999999        999999999999999999876644321 1122334567799999876


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc--c----------------------cCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF--I----------------------YLP  142 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~----------------------~~~  142 (188)
                      +. .++.++||||||+++++++  ++..||...........+..........  .                      ...
T Consensus       175 ~~~~~~~~~Dv~slG~~l~el~--t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T cd07840         175 GATRYGPEVDMWSVGCILAELF--LGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFF  252 (287)
T ss_pred             ccccCChHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHh
Confidence            43 4688999999999999999  5678888776555444433211100000  0                      000


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ....+.++.+++.+||..+|++||+++++.
T Consensus       253 ~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l  282 (287)
T cd07840         253 KHLIDPSALDLLDKLLTLDPKKRISADQAL  282 (287)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence            111377899999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.5e-25  Score=170.94  Aligned_cols=159  Identities=18%  Similarity=0.207  Sum_probs=119.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.++++|||++.......     ....++..|++||.+.
T Consensus       122 ~i~~qi~~al~~LH~~gi~H~dlkp--------~Nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~  188 (343)
T cd07880         122 FLVYQMLKGLKYIHAAGIIHRDLKP--------GNLAVNEDCELKILDFGLARQTDSEM-----TGYVVTRWYRAPEVIL  188 (343)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEeecccccccccCc-----cccccCCcccCHHHHh
Confidence            3567889999999999999999999        99999999999999999987653221     2334577899999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC------------------------CcccCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG------------------------EFIYLP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~  142 (188)
                      + ..++.++|+||+|+++++++  .|..||.+.........+........                        ......
T Consensus       189 ~~~~~~~~~Di~slG~ll~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (343)
T cd07880         189 NWMHYTQTVDIWSVGCIMAEML--TGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSL  266 (343)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHh
Confidence            5 34788999999999999999  56789987665443333222111000                        000011


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ....+.++.+++.+|+..||++||++.++  |+||+.....
T Consensus       267 ~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         267 LPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             ccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence            23456789999999999999999999999  7899877544

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=2.5e-25  Score=162.02  Aligned_cols=148  Identities=22%  Similarity=0.381  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++|++|+|++|        .||+++.++.++|+|||.+........   .....++..|++||.+.
T Consensus       102 ~i~~~i~~~l~~lh~~~i~h~dl~p--------~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~  170 (253)
T cd05122         102 YVCKELLKGLEYLHSNGIIHRDIKA--------ANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVIN  170 (253)
T ss_pred             HHHHHHHHHHHHhhcCCEecCCCCH--------HHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHc
Confidence            3567888999999999999999999        999999999999999998776644321   23445677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++|+||+|+++++++  .|..||...............    ...........+..+.+++.+||..||++||+
T Consensus       171 ~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t  244 (253)
T cd05122         171 GKPYDYKADIWSLGITAIELA--EGKPPYSELPPMKALFKIATN----GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT  244 (253)
T ss_pred             CCCCCccccHHHHHHHHHHHH--hCCCCCCCCchHHHHHHHHhc----CCCCcCcccccCHHHHHHHHHHccCChhhCCC
Confidence            888889999999999999999  466888877544444333221    11111112223778999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.+++
T Consensus       245 ~~~~l  249 (253)
T cd05122         245 AEQLL  249 (253)
T ss_pred             HHHHh
Confidence            99984

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.93  E-value=1.7e-25  Score=168.63  Aligned_cols=148  Identities=24%  Similarity=0.363  Sum_probs=115.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh-
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   87 (188)
                      ++.+++.++.|+|++|++|+|++|        .||+++.++.++|+|||++.....      .....++..|++||.+. 
T Consensus       126 ~~~qi~~al~~LH~~gi~H~dl~p--------~nili~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~  191 (313)
T cd06633         126 ITHGALQGLAYLHSHNMIHRDIKA--------GNILLTEPGQVKLADFGSASKSSP------ANSFVGTPYWMAPEVILA  191 (313)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCh--------hhEEECCCCCEEEeecCCCcccCC------CCCccccccccChhhccc
Confidence            566889999999999999999999        999999999999999998754321      12345677899999984 


Q ss_pred             --cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 --LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 --~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                        ...++.++|+||+|+++++++  .|..||.+.........+....     .........+..+.+++.+||+.+|++|
T Consensus       192 ~~~~~~~~~sDv~slGvil~el~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~P~~R  264 (313)
T cd06633         192 MDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQND-----SPTLQSNEWTDSFRGFVDYCLQKIPQER  264 (313)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHhcC-----CCCCCccccCHHHHHHHHHHccCChhhC
Confidence              345788999999999999999  5678888876555554443221     1112223456789999999999999999


Q ss_pred             CCHHHH--HHHHHh
Q psy4332         166 PSFTEI--HLFLQR  177 (188)
Q Consensus       166 ps~~el--~~~l~~  177 (188)
                      |++.++  +++++.
T Consensus       265 p~~~~~l~~~~~~~  278 (313)
T cd06633         265 PASAELLRHDFVRR  278 (313)
T ss_pred             cCHHHHhcCcccCC
Confidence            999999  666654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG4645|consensus

Probab=99.93  E-value=9.7e-27  Score=192.54  Aligned_cols=149  Identities=19%  Similarity=0.287  Sum_probs=117.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCccccchhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~   86 (188)
                      ...+++.++.|||++||+|||+||        .||+++.+|.+|++|||.+..+....+.  .......||+.|||||.+
T Consensus      1339 yt~qll~gla~LH~~gIVHRDIK~--------aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvi 1410 (1509)
T KOG4645|consen 1339 YTKQLLEGLAYLHEHGIVHRDIKP--------ANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVI 1410 (1509)
T ss_pred             HHHHHHHHHHHHHhcCceecCCCc--------cceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhh
Confidence            346788999999999999999999        9999999999999999999887654311  112356799999999999


Q ss_pred             hcCC---CCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          87 RLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        87 ~~~~---~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .+..   -...+||||+||++.||+  +|.-||...+. ..+..++.-     +..+..|.. .+.+-++|+.+||+.||
T Consensus      1411 t~t~~kG~~~A~DiWslGCVVlEM~--tGkrPW~~~dne~aIMy~V~~-----gh~Pq~P~~-ls~~g~dFle~Cl~~dP 1482 (1509)
T KOG4645|consen 1411 TGTKGKGHGGAADIWSLGCVVLEMA--TGKRPWAELDNEWAIMYHVAA-----GHKPQIPER-LSSEGRDFLEHCLEQDP 1482 (1509)
T ss_pred             cccccCCCCcchhhhcccceEEEee--cCCCchhhccchhHHHhHHhc-----cCCCCCchh-hhHhHHHHHHHHHhcCc
Confidence            8543   345799999999999999  56779988753 344444433     333334433 78899999999999999


Q ss_pred             CCCCCHHHHHH
Q psy4332         163 TERPSFTEIHL  173 (188)
Q Consensus       163 ~~Rps~~el~~  173 (188)
                      ++|.++.|+++
T Consensus      1483 ~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1483 KMRWTASQLLE 1493 (1509)
T ss_pred             hhhhHHHHHHH
Confidence            99999988843

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.93  E-value=3e-25  Score=167.61  Aligned_cols=143  Identities=21%  Similarity=0.326  Sum_probs=112.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh-
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   87 (188)
                      ++.+++.++.|+|++||+|+|++|        .||+++.++.++|+|||++......      ....++..|++||.+. 
T Consensus       130 i~~~i~~~l~~lH~~~i~H~dL~p--------~Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~  195 (317)
T cd06635         130 ITHGALQGLAYLHSHNMIHRDIKA--------GNILLTEPGQVKLADFGSASIASPA------NSFVGTPYWMAPEVILA  195 (317)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCc--------ccEEECCCCCEEEecCCCccccCCc------ccccCCccccChhhhhc
Confidence            567889999999999999999999        9999999999999999987654321      2334677899999974 


Q ss_pred             --cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 --LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 --~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                        ...++.++|+||+|+++++++  .|..||...........+....     .........+..+.+++.+||..+|.+|
T Consensus       196 ~~~~~~~~~~Dv~slGvil~el~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~R  268 (317)
T cd06635         196 MDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQNE-----SPTLQSNEWSDYFRNFVDSCLQKIPQDR  268 (317)
T ss_pred             CCCCCCCccccHHHHHHHHHHHH--hCCCCCCCccHHHHHHHHHhcc-----CCCCCCccccHHHHHHHHHHccCCcccC
Confidence              345788999999999999999  5678887776555554443221     1112223457789999999999999999


Q ss_pred             CCHHHHH
Q psy4332         166 PSFTEIH  172 (188)
Q Consensus       166 ps~~el~  172 (188)
                      |++.++.
T Consensus       269 pt~~~il  275 (317)
T cd06635         269 PTSEELL  275 (317)
T ss_pred             cCHHHHH
Confidence            9999994

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=1.4e-25  Score=167.98  Aligned_cols=154  Identities=22%  Similarity=0.241  Sum_probs=113.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||++||+|+|+||        .||+++.++.+||+|||++........ .......++..|++||.+.
T Consensus       120 ~i~~qi~~aL~~LH~~~i~H~dl~p--------~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~  190 (302)
T cd07864         120 SFMKQLLEGLNYCHKKNFLHRDIKC--------SNILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLL  190 (302)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhc
Confidence            4567889999999999999999999        999999999999999999876543321 1112233466799999886


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-----------------------cCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-----------------------YLPT  143 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~  143 (188)
                      +. ..+.++||||+|+++++++  .|..||......+....+...........                       ....
T Consensus       191 ~~~~~~~~~Di~slG~~~~el~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
T cd07864         191 GEERYGPAIDVWSCGCILGELF--TKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF  268 (302)
T ss_pred             CCCCCCchhHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhc
Confidence            43 4688999999999999999  46788887665544443332111110000                       0011


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ...+..+.+++.+||..+|++||++++++
T Consensus       269 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il  297 (302)
T cd07864         269 SFIPTPALDLLDHMLTLDPSKRCTAEEAL  297 (302)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            23578899999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.93  E-value=1.8e-25  Score=155.16  Aligned_cols=145  Identities=19%  Similarity=0.200  Sum_probs=105.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|+++      ||        +||+++.++.+|+  ||++......       ...+++.|+|||++
T Consensus        20 ~~i~~qi~~~L~~lH~~~------kp--------~Nil~~~~~~~~~--fG~~~~~~~~-------~~~g~~~y~aPE~~   76 (176)
T smart00750       20 WAVCLQCLRALRELHRQA------KS--------GNILLTWDGLLKL--DGSVAFKTPE-------QSRVDPYFMAPEVI   76 (176)
T ss_pred             HHHHHHHHHHHHHHHhcC------Cc--------ccEeEcCccceee--ccceEeeccc-------cCCCcccccChHHh
Confidence            356778999999999998      99        9999999999998  9987655332       22467889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChH--HHHHHHHHHhccCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTK--DILDLMNECWKRSPT  163 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~cl~~dp~  163 (188)
                      .+..++.++||||+|+++|+++  +|..||...... .....+..................+.  ++.+++.+||..+|+
T Consensus        77 ~~~~~~~~~DiwSlG~il~ell--tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~  154 (176)
T smart00750       77 QGQSYTEKADIYSLGITLYEAL--DYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQ  154 (176)
T ss_pred             cCCCCcchhhHHHHHHHHHHHH--hCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccc
Confidence            9888999999999999999999  567788765322 22222222111111100011112233  689999999999999


Q ss_pred             CCCCHHHHHHHHH
Q psy4332         164 ERPSFTEIHLFLQ  176 (188)
Q Consensus       164 ~Rps~~el~~~l~  176 (188)
                      +||++.++...+.
T Consensus       155 ~Rp~~~~ll~~~~  167 (176)
T smart00750      155 RREAANHYLAHCR  167 (176)
T ss_pred             cccCHHHHHHHHH
Confidence            9999999955443

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.93  E-value=1.8e-25  Score=169.61  Aligned_cols=162  Identities=20%  Similarity=0.214  Sum_probs=117.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+|++|        .||+++.++.++|+|||.+.......     ....++..|++||.+.+
T Consensus       113 ~~~ql~~aL~~LH~~~iiH~dl~p--------~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         113 FLYQILRGLKYVHSAGVVHRDLKP--------SNILINENCDLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCH--------HHEeECCCCCEEeCccccccccCCCc-----CCCcccccccCceeeec
Confidence            567888999999999999999999        99999999999999999876543211     22345677999998765


Q ss_pred             -CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC------------------------CCCcccCCC
Q psy4332          89 -RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD------------------------DGEFIYLPT  143 (188)
Q Consensus        89 -~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~  143 (188)
                       ..++.++|+||+|+++++++  +|..||...........+......                        .........
T Consensus       180 ~~~~~~~~Dv~slG~il~el~--tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (328)
T cd07856         180 WQKYDVEVDIWSAGCIFAEML--EGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKF  257 (328)
T ss_pred             cCCcCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHc
Confidence             45788999999999999999  456788765543222111110000                        000000011


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP  185 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~  185 (188)
                      +..+.++.+++.+||..+|++||+++++  ++|+++.......|
T Consensus       258 ~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~  301 (328)
T cd07856         258 KNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEP  301 (328)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcccc
Confidence            2456789999999999999999999999  78888776654443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1035|consensus

Probab=99.93  E-value=2.8e-25  Score=183.08  Aligned_cols=148  Identities=20%  Similarity=0.292  Sum_probs=108.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCC---C-------------CccccccC
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF---S-------------SDYYRVHD   72 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~---~-------------~~~~~~~~   72 (188)
                      +-++|+.|+.|+|++||||||+||        .||+++++..+||+|||++....   .             +......+
T Consensus       702 LFreIlEGLaYIH~~giIHRDLKP--------~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T  773 (1351)
T KOG1035|consen  702 LFREILEGLAYIHDQGIIHRDLKP--------RNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT  773 (1351)
T ss_pred             HHHHHHHHHHHHHhCceeeccCCc--------ceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence            346899999999999999999999        99999999999999999987621   0             01111234


Q ss_pred             CCCCCccccchhhhhcCC---CCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCCCCCcccCCCCCChH
Q psy4332          73 NTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTK  148 (188)
Q Consensus        73 ~~~~~~~~~~Pe~~~~~~---~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (188)
                      ...||.-|+|||++.+..   ++.|.|+||+|++++||+  .   ||... ........+..+..+..  ..+..+.+ +
T Consensus       774 s~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~--y---PF~TsMERa~iL~~LR~g~iP~~--~~f~~~~~-~  845 (1351)
T KOG1035|consen  774 SQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML--Y---PFGTSMERASILTNLRKGSIPEP--ADFFDPEH-P  845 (1351)
T ss_pred             cccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh--c---cCCchHHHHHHHHhcccCCCCCC--cccccccc-h
Confidence            566888999999997544   889999999999999998  3   55542 22333443332222111  11122333 3


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         149 DILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       149 ~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      .-..+|++|++.||++|||+.|++
T Consensus       846 ~e~slI~~Ll~hdP~kRPtA~eLL  869 (1351)
T KOG1035|consen  846 EEASLIRWLLSHDPSKRPTATELL  869 (1351)
T ss_pred             HHHHHHHHHhcCCCccCCCHHHHh
Confidence            567899999999999999999983

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=2.2e-25  Score=165.75  Aligned_cols=149  Identities=24%  Similarity=0.374  Sum_probs=111.7

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|+ ++++|+|+||        .||+++.++.++|+|||++.......    .....++..|++||.+
T Consensus       107 ~~~~~i~~~l~~LH~~~~i~H~dl~p--------~nil~~~~~~~~l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~  174 (284)
T cd06620         107 KIAVAVVEGLTYLYNVHRIMHRDIKP--------SNILVNSRGQIKLCDFGVSGELINSI----ADTFVGTSTYMSPERI  174 (284)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccCCCH--------HHEEECCCCcEEEccCCcccchhhhc----cCccccCcccCCHHHH
Confidence            456778889999996 6999999999        99999999999999999876543221    1234577889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH--------HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL--------EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      .+..++.++|+||+|+++++++  +|..||......        .....+....  .......+...++.++.+++.+||
T Consensus       175 ~~~~~~~~~Di~slG~~l~~l~--tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l  250 (284)
T cd06620         175 QGGKYTVKSDVWSLGISIIELA--LGKFPFAFSNIDDDGQDDPMGILDLLQQIV--QEPPPRLPSSDFPEDLRDFVDACL  250 (284)
T ss_pred             ccCCCCccchHHHHHHHHHHHH--hCCCCCcccchhhhhhhhhhHHHHHHHHHh--hccCCCCCchhcCHHHHHHHHHHh
Confidence            8888899999999999999999  567888765431        1111111111  111111222336778999999999


Q ss_pred             ccCCCCCCCHHHHH
Q psy4332         159 KRSPTERPSFTEIH  172 (188)
Q Consensus       159 ~~dp~~Rps~~el~  172 (188)
                      ..||++||++.|+.
T Consensus       251 ~~dp~~Rpt~~e~~  264 (284)
T cd06620         251 LKDPTERPTPQQLC  264 (284)
T ss_pred             cCCcccCcCHHHHh
Confidence            99999999999994

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.92  E-value=1.8e-25  Score=166.77  Aligned_cols=152  Identities=18%  Similarity=0.208  Sum_probs=106.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+|+||||        +||+++.++.++|+|||++........  ......++..|+|||.+.+
T Consensus       108 ~~~ql~~al~~lH~~~i~H~dl~p--------~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~  177 (291)
T cd07844         108 FLFQLLRGLAYCHQRRVLHRDLKP--------QNLLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             HHHHHHHHHHHHHhCCeecccCCH--------HHEEEcCCCCEEECccccccccCCCCc--cccccccccccCCcHHhhc
Confidence            356889999999999999999999        999999999999999998765432211  1122335677999999875


Q ss_pred             -CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHhhcccCCC--CC---------------------cccCCC
Q psy4332          89 -RKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADD--GE---------------------FIYLPT  143 (188)
Q Consensus        89 -~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-~~~~~~~~~~~~~~~--~~---------------------~~~~~~  143 (188)
                       ..++.++||||+|+++++++  +|..||.+.. ..+....+.......  ..                     ......
T Consensus       178 ~~~~~~~~Dv~slG~il~~l~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (291)
T cd07844         178 STEYSTSLDMWGVGCIFYEMA--TGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHA  255 (291)
T ss_pred             CcccCcHHHHHHHHHHHHHHH--hCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhC
Confidence             34788999999999999999  5677886654 222222111100000  00                     000000


Q ss_pred             CCCh--HHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         144 PQTT--KDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       144 ~~~~--~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ....  .++.+++.+||..+|++||++.++.
T Consensus       256 ~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l  286 (291)
T cd07844         256 PRLDRIPHGEELALKFLQYEPKKRISAAEAM  286 (291)
T ss_pred             cCCCCchhHHHHHHHHhccCcccccCHHHHh
Confidence            1222  6788999999999999999999983

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.8e-25  Score=162.23  Aligned_cols=147  Identities=22%  Similarity=0.359  Sum_probs=115.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++||+|+|+||        +||+++.++.++|+|||++........  ......++..|++||...
T Consensus       103 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~  172 (254)
T cd06627         103 VYVYQVLQGLAYLHEQGVIHRDIKA--------ANILTTKDGVVKLADFGVATKLNDVSK--DDASVVGTPYWMAPEVIE  172 (254)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCH--------HHEEECCCCCEEEeccccceecCCCcc--cccccccchhhcCHhhhc
Confidence            4567888999999999999999999        999999999999999999877654332  123345677899999988


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++|+|++|+++++++  +|..||...............     .. .......+..+.+++.+||..+|++||+
T Consensus       173 ~~~~~~~~Dv~~lG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~  244 (254)
T cd06627         173 MSGASTASDIWSLGCTVIELL--TGNPPYYDLNPMAALFRIVQD-----DH-PPLPEGISPELKDFLMQCFQKDPNLRPT  244 (254)
T ss_pred             CCCCCcchhHHHHHHHHHHHH--hCCCCCCCccHHHHHHHHhcc-----CC-CCCCCCCCHHHHHHHHHHHhCChhhCcC
Confidence            777888999999999999999  567888776654443333211     11 1122456789999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.++.
T Consensus       245 ~~~~l  249 (254)
T cd06627         245 AKQLL  249 (254)
T ss_pred             HHHHh
Confidence            99983

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.92  E-value=2.3e-25  Score=162.78  Aligned_cols=147  Identities=21%  Similarity=0.330  Sum_probs=117.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.++|++|++|+|++|        +||+++.++.++|+|||++.......  .......+++.|++||...
T Consensus       107 ~i~~~i~~~l~~lh~~~~~H~dl~~--------~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~  176 (258)
T cd08215         107 DWFVQLCLALKYLHSRKILHRDIKP--------QNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQ  176 (258)
T ss_pred             HHHHHHHHHHHHHHhCCEecccCCh--------HHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhc
Confidence            3566889999999999999999999        99999999999999999887654432  1223345677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+|++|+++++++  .+..||......+.........     . .......+.++.+++.+||..+|++||+
T Consensus       177 ~~~~~~~~Dv~slG~~~~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~  248 (258)
T cd08215         177 NKPYNYKSDIWSLGCVLYELC--TLKHPFEGENLLELALKILKGQ-----Y-PPIPSQYSSELRNLVSSLLQKDPEERPS  248 (258)
T ss_pred             cCCCCccccHHHHHHHHHHHH--cCCCCCCCCcHHHHHHHHhcCC-----C-CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            888899999999999999999  6678888776555555543221     1 1112356789999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.++.
T Consensus       249 ~~~ll  253 (258)
T cd08215         249 IAQIL  253 (258)
T ss_pred             HHHHh
Confidence            99983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=5.8e-25  Score=160.82  Aligned_cols=145  Identities=20%  Similarity=0.263  Sum_probs=116.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.++|++|++|+|++|        +||+++.++.+|++|||++......    ......++..|++||.+.
T Consensus       107 ~~~~~l~~al~~lh~~~i~h~~l~~--------~ni~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~  174 (256)
T cd08530         107 RIFIQLLRGLQALHEQKILHRDLKS--------ANILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWK  174 (256)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCc--------ceEEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHHHC
Confidence            4456788999999999999999999        9999999999999999988766433    122344677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++++++  .|..||......+....+....     .. ......+.++.+++.+||..+|++||+
T Consensus       175 ~~~~~~~~D~~slG~~~~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~  246 (256)
T cd08530         175 GRPYSYKSDIWSLGCLLYEMA--TFAPPFEARSMQDLRYKVQRGK-----YP-PIPPIYSQDLQNFIRSMLQVKPKLRPN  246 (256)
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhcCC-----CC-CCchhhCHHHHHHHHHHcCCCcccCCC
Confidence            888889999999999999999  5678998887665555443221     11 112356788999999999999999999


Q ss_pred             HHHHH
Q psy4332         168 FTEIH  172 (188)
Q Consensus       168 ~~el~  172 (188)
                      +.+++
T Consensus       247 ~~~~l  251 (256)
T cd08530         247 CDKIL  251 (256)
T ss_pred             HHHHh
Confidence            99984

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0665|consensus

Probab=99.92  E-value=8.7e-26  Score=163.35  Aligned_cols=156  Identities=17%  Similarity=0.207  Sum_probs=121.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .+.-++++|..|+|+.||+||||||        +||++..+..+||.|||+++.....   -+.+....+..|.|||++.
T Consensus       122 ~i~yq~~~~ik~lhs~~IihRdLkP--------snivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil  190 (369)
T KOG0665|consen  122 YILYQMLCGIKHLHSAGIIHRDLKP--------SNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVIL  190 (369)
T ss_pred             HHHHHHHHHHHHHHhcceeecccCc--------ccceecchhheeeccchhhcccCcc---cccCchhheeeccCchhee
Confidence            3456788999999999999999999        9999999999999999998765433   1334445667799999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-------------------------cCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-------------------------YLP  142 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~  142 (188)
                      +-.++..+||||+||++.||.  .|..-|.+.+..+.+.++......+....                         .++
T Consensus       191 ~~~~ke~vdiwSvGci~gEli--~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fp  268 (369)
T KOG0665|consen  191 GMGYKENVDIWSVGCIMGELI--LGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFP  268 (369)
T ss_pred             ccCCcccchhhhhhhHHHHHh--hceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCC
Confidence            888999999999999999999  56677777766666655554443332210                         011


Q ss_pred             C----------CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHH
Q psy4332         143 T----------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       143 ~----------~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~  176 (188)
                      +          +.-...+++++.+||..+|++|.+++++  |++++
T Consensus       269 D~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  269 DSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             cccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            1          1224568899999999999999999999  88887

>KOG0584|consensus

Probab=99.92  E-value=9.4e-26  Score=175.25  Aligned_cols=149  Identities=17%  Similarity=0.266  Sum_probs=121.4

Q ss_pred             cccchhhhhhhhc--ccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRN--KNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh--~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      -|++|+.||.|||  ...|+|||||-        +||+++.+ |.+||+|+|++.......    .....|||-|||||.
T Consensus       148 W~RQILkGL~yLHs~~PPIIHRDLKC--------DNIFinG~~G~VKIGDLGLAtl~r~s~----aksvIGTPEFMAPEm  215 (632)
T KOG0584|consen  148 WCRQILKGLVYLHSQDPPIIHRDLKC--------DNIFVNGNLGEVKIGDLGLATLLRKSH----AKSVIGTPEFMAPEM  215 (632)
T ss_pred             HHHHHHHHhhhhhcCCCCcccccccc--------ceEEEcCCcCceeecchhHHHHhhccc----cceeccCccccChHH
Confidence            3789999999999  46899999999        99999877 889999999988765432    234789999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .. ..|...+||||||++++||.  ++.+||+.- ++.++..++..+..+....     .--.+++++||.+|+.. .++
T Consensus       216 YE-E~YnE~VDVYaFGMCmLEMv--T~eYPYsEC~n~AQIYKKV~SGiKP~sl~-----kV~dPevr~fIekCl~~-~~~  286 (632)
T KOG0584|consen  216 YE-ENYNELVDVYAFGMCMLEMV--TSEYPYSECTNPAQIYKKVTSGIKPAALS-----KVKDPEVREFIEKCLAT-KSE  286 (632)
T ss_pred             Hh-hhcchhhhhhhhhHHHHHHH--hccCChhhhCCHHHHHHHHHcCCCHHHhh-----ccCCHHHHHHHHHHhcC-chh
Confidence            97 78999999999999999999  568999875 5667777776543322111     11256899999999999 999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      |+|+.|+  ++||+..
T Consensus       287 R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  287 RLSAKELLKDPFFDED  302 (632)
T ss_pred             ccCHHHHhhChhhccc
Confidence            9999999  6788765

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.92  E-value=2.9e-25  Score=162.29  Aligned_cols=150  Identities=21%  Similarity=0.338  Sum_probs=115.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|++|        +||+++.++.++|+|||.+................++..|++||.+.
T Consensus       105 ~~~~~l~~~l~~lh~~~~~h~dl~p--------~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606         105 KYTRQILEGLAYLHSNGIVHRDIKG--------ANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCH--------HHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhc
Confidence            3567888999999999999999999        99999999999999999887765443211123445677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +...+.++|+|++|+++++++  .|..||.... .......+..     ...........+..+.+++.+|+..+|++||
T Consensus       177 ~~~~~~~~Dv~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp  249 (260)
T cd06606         177 GEEYGRAADIWSLGCTVIEMA--TGKPPWSELGNPMAALYKIGS-----SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRP  249 (260)
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCchHHHHHhccc-----cCCCcCCCcccCHHHHHHHHHhCcCChhhCC
Confidence            888899999999999999999  5678887765 2222222221     1111112234478999999999999999999


Q ss_pred             CHHHHH
Q psy4332         167 SFTEIH  172 (188)
Q Consensus       167 s~~el~  172 (188)
                      ++.+++
T Consensus       250 ~~~~ll  255 (260)
T cd06606         250 TADELL  255 (260)
T ss_pred             CHHHHh
Confidence            999983

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.92  E-value=2e-25  Score=165.82  Aligned_cols=153  Identities=20%  Similarity=0.246  Sum_probs=112.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++.......  .......++..|++||.+.
T Consensus       104 ~~~~qi~~~l~~lH~~~i~h~dl~p--------~ni~~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~  173 (284)
T cd07836         104 SFTYQLLKGIAFCHENRVLHRDLKP--------QNLLINKRGELKLADFGLARAFGIPV--NTFSNEVVTLWYRAPDVLL  173 (284)
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCH--------HHEEECCCCcEEEeecchhhhhcCCc--cccccccccccccChHHhc
Confidence            3567889999999999999999999        99999999999999999986553321  1222334567899999986


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC------------cccC----------CCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE------------FIYL----------PTP  144 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~----------~~~  144 (188)
                      +. .++.++|+|++|+++++++  .|..||.+....+...++.........            ....          ..+
T Consensus       174 ~~~~~~~~~Dv~slG~~l~~l~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd07836         174 GSRTYSTSIDIWSVGCIMAEMI--TGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFP  251 (284)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhh
Confidence            54 4688999999999999999  467888876655444433221100000            0000          012


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ..+.++.+++.+|++.||++||++.+++
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l  279 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRISAHDAL  279 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence            3467889999999999999999999984

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG1027|consensus

Probab=99.92  E-value=3.2e-26  Score=182.56  Aligned_cols=149  Identities=23%  Similarity=0.321  Sum_probs=114.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---c--ceEEEccCCCCccCCCCcc-ccccCCCCCCcccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---K--FEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWM   81 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~--~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~   81 (188)
                      ....+++.|+.+||+-+|+|||+||        .||||+.   +  .+++|+|||+++....+.. ........||-+|+
T Consensus       610 ~~l~q~~~GlaHLHsl~iVHRDLkP--------QNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~  681 (903)
T KOG1027|consen  610 SVLSQIASGLAHLHSLKIVHRDLKP--------QNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQ  681 (903)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCC--------ceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCccccc
Confidence            3456778899999999999999999        9999976   2  5689999999998864322 23345677899999


Q ss_pred             chhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        82 ~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      |||.+.....+..+||||+||++|+++| .|..||.+....+  ..+.....   ...... +....+..++|.+|+.++
T Consensus       682 APE~L~~~~~~~avDiFslGCvfyYvlt-gG~HpFGd~~~R~--~NIl~~~~---~L~~L~-~~~d~eA~dLI~~ml~~d  754 (903)
T KOG1027|consen  682 APEQLREDRKTQAVDIFSLGCVFYYVLT-GGSHPFGDSLERQ--ANILTGNY---TLVHLE-PLPDCEAKDLISRMLNPD  754 (903)
T ss_pred             CHHHHhccccCcccchhhcCceEEEEec-CCccCCCchHHhh--hhhhcCcc---ceeeec-cCchHHHHHHHHHhcCCC
Confidence            9999998888889999999999999998 4789998865332  22322211   111111 122228999999999999


Q ss_pred             CCCCCCHHHH
Q psy4332         162 PTERPSFTEI  171 (188)
Q Consensus       162 p~~Rps~~el  171 (188)
                      |..||++.+|
T Consensus       755 P~~RPsa~~V  764 (903)
T KOG1027|consen  755 PQLRPSATDV  764 (903)
T ss_pred             cccCCCHHHH
Confidence            9999999999

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.92  E-value=3.2e-25  Score=163.31  Aligned_cols=156  Identities=19%  Similarity=0.278  Sum_probs=112.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCcccc--ccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe   84 (188)
                      ..+.+++.|+.++|++|++|+||+|        .||+++.++ .++|+|||++..........  ......++..|++||
T Consensus       107 ~~~~ql~~al~~LH~~~i~H~~i~~--------~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE  178 (268)
T cd06630         107 NYTEQLLRGLSYLHENQIIHRDVKG--------ANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE  178 (268)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHh
Confidence            3467899999999999999999999        999998765 58999999977664331111  112334677899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++|+|++|+++++++  .|..||...........+.....  ...........+.++.+++.+||..+|++
T Consensus       179 ~~~~~~~~~~~Dv~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  254 (268)
T cd06630         179 VLRGEQYGRSCDVWSVGCVIIEMA--TAKPPWNAEKHSNHLALIFKIAS--ATTAPSIPEHLSPGLRDVTLRCLELQPED  254 (268)
T ss_pred             HhccCCCCcccchHHHHHHHHHHH--hCCCCCCCCCCcchHHHHHHHhc--cCCCCCCchhhCHHHHHHHHHHcCCCccc
Confidence            998878899999999999999999  56788865432222211111100  01111122345778999999999999999


Q ss_pred             CCCHHHH--HHHH
Q psy4332         165 RPSFTEI--HLFL  175 (188)
Q Consensus       165 Rps~~el--~~~l  175 (188)
                      ||++.++  |++|
T Consensus       255 R~~~~~ll~~~~~  267 (268)
T cd06630         255 RPPSRELLKHPVF  267 (268)
T ss_pred             CcCHHHHhcCccc
Confidence            9999998  5554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=3.9e-25  Score=164.18  Aligned_cols=152  Identities=18%  Similarity=0.285  Sum_probs=110.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++|++|+|++|        +||+++.++.++|+|||++.......   ......++..|+|||.+.
T Consensus       103 ~~~~~l~~~l~~Lh~~~i~H~dl~~--------~ni~i~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~  171 (283)
T cd07830         103 SIIYQILQGLAHIHKHGFFHRDLKP--------ENLLVSGPEVVKIADFGLAREIRSRP---PYTDYVSTRWYRAPEILL  171 (283)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCh--------hhEEEcCCCCEEEeecccceeccCCC---CcCCCCCcccccCceeee
Confidence            3567889999999999999999999        99999999999999999987654332   122344667899999875


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----------------------cccCCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----------------------FIYLPT  143 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~  143 (188)
                      + ...+.++|+||||+++++++|  |..||......+...+..........                       ......
T Consensus       172 ~~~~~~~~~Di~s~G~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (283)
T cd07830         172 RSTSYSSPVDIWALGCIMAELYT--LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLI  249 (283)
T ss_pred             cCcCcCCccchhhHHHHHHHHHh--CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHc
Confidence            3 447889999999999999995  56788766544433322211110000                       000001


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      +..+.++.+++++||..+|++||+++|++
T Consensus       250 ~~~~~~~~~li~~cl~~~p~~Rpt~~ei~  278 (283)
T cd07830         250 PNASPEAIDLIKDMLRWDPKKRPTASQAL  278 (283)
T ss_pred             ccCCHHHHHHHHHhcccCcccCCCHHHHh
Confidence            12357899999999999999999999983

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=7.9e-25  Score=160.73  Aligned_cols=145  Identities=23%  Similarity=0.305  Sum_probs=111.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++|++|+|+||        +||+++. +.++++|||++........  ......++..|++||.+.+
T Consensus       111 ~~~~l~~~l~~lH~~~i~h~~l~~--------~nili~~-~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~  179 (260)
T cd08222         111 WFIQLLLGVHYMHQRRILHRDLKA--------KNIFLKN-NLLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKH  179 (260)
T ss_pred             HHHHHHHHHHHHHHcCccccCCCh--------hheEeec-CCEeecccCceeecCCCcc--cccCCCCCcCccCHHHHcc
Confidence            456788999999999999999999        9999975 4699999998776543321  2234456778999999887


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++|+||+|+++++++  .+..||.+.........+...     .. .......+.++.+++.+||..+|++||++
T Consensus       180 ~~~~~~~Dv~slG~~~~~l~--~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (260)
T cd08222         180 QGYDSKSDIWSLGCILYEMC--CLAHAFEGQNFLSVVLRIVEG-----PT-PSLPETYSRQLNSIMQSMLNKDPSLRPSA  251 (260)
T ss_pred             CCCCchhhHHHHHHHHHHHH--hCCCCCCCccHHHHHHHHHcC-----CC-CCCcchhcHHHHHHHHHHhcCChhhCcCH
Confidence            77888999999999999999  556788766554444443321     11 11123557799999999999999999999


Q ss_pred             HHHH
Q psy4332         169 TEIH  172 (188)
Q Consensus       169 ~el~  172 (188)
                      .+++
T Consensus       252 ~~il  255 (260)
T cd08222         252 AEIL  255 (260)
T ss_pred             HHHh
Confidence            9983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=2e-25  Score=186.35  Aligned_cols=153  Identities=12%  Similarity=0.070  Sum_probs=103.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-------------------cceEEEccCCCCccCCCCcc-
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-------------------KFEIKISDFATDSDMFSSDY-   67 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-------------------~~~~kl~dfg~~~~~~~~~~-   67 (188)
                      .+..+|+.|+.|+|++||+||||||        +|||++.                   ++.+|++|||+++....... 
T Consensus        84 ~i~~qi~~al~~lH~~gIvHrDlKP--------~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~  155 (793)
T PLN00181         84 HVFRQIVEIVNAAHSQGIVVHNVRP--------SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSER  155 (793)
T ss_pred             HHHHHHHHHHHHHHhCCeeeccCCc--------hhEEEcccCcEEEeeccccCcccccccCccccccccccccccccccc
Confidence            3456899999999999999999999        8888854                   34466667776653211000 


Q ss_pred             ----c---------cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC
Q psy4332          68 ----Y---------RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD  134 (188)
Q Consensus        68 ----~---------~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~  134 (188)
                          .         .......+|+.|+|||++.+..++.++|||||||++|||+  ++..|+....  .....+..... 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl--~~~~~~~~~~--~~~~~~~~~~~-  230 (793)
T PLN00181        156 RIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF--CPVSSREEKS--RTMSSLRHRVL-  230 (793)
T ss_pred             chhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh--hCCCchhhHH--HHHHHHHHhhc-
Confidence                0         0011234678899999999888999999999999999999  4455544321  12222211110 


Q ss_pred             CCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         135 DGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      .    ... .....+..+++.+||..+|.+||++.|+  |+||.+.
T Consensus       231 ~----~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        231 P----PQI-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             C----hhh-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            0    000 1123456789999999999999999999  7888653

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=5.7e-25  Score=162.80  Aligned_cols=148  Identities=23%  Similarity=0.375  Sum_probs=115.7

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc------------------
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY------------------   68 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~------------------   68 (188)
                      ..++.+++.++.++|++|++|+|++|        +||+++.++.++++|||++.........                  
T Consensus       105 ~~i~~ql~~~l~~Lh~~~~~H~dl~~--------~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (280)
T cd05581         105 RFYAAEILLALEYLHSKGIIHRDLKP--------ENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNR  176 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCH--------HHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccc
Confidence            34567889999999999999999999        9999999999999999987765432210                  


Q ss_pred             cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChH
Q psy4332          69 RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK  148 (188)
Q Consensus        69 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (188)
                      .......++..|++||.......+.++|+||+|+++++++  .|..||...........+....       .......+.
T Consensus       177 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~  247 (280)
T cd05581         177 RRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML--TGKPPFRGSNEYLTFQKILKLE-------YSFPPNFPP  247 (280)
T ss_pred             cccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHH--hCCCCCCCccHHHHHHHHHhcC-------CCCCCccCH
Confidence            1112334567899999998778899999999999999999  5678998776555444443211       112234578


Q ss_pred             HHHHHHHHHhccCCCCCCCH----HHH
Q psy4332         149 DILDLMNECWKRSPTERPSF----TEI  171 (188)
Q Consensus       149 ~~~~li~~cl~~dp~~Rps~----~el  171 (188)
                      .+.+++.+||..+|++||++    +++
T Consensus       248 ~~~~li~~~l~~~p~~R~~~~~~~~~l  274 (280)
T cd05581         248 DAKDLIEKLLVLDPQDRLGVNEGYDEL  274 (280)
T ss_pred             HHHHHHHHHhcCCHhhCCCcccCHHHH
Confidence            99999999999999999999    777

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.92  E-value=3.1e-25  Score=162.72  Aligned_cols=143  Identities=22%  Similarity=0.340  Sum_probs=112.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++|++|+|++|        .||+++.++.++|+|||++.......   ......++..|++||.+.+
T Consensus       105 ~~~~i~~~l~~lh~~~i~h~dl~~--------~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~  173 (258)
T cd05578         105 WICEIVLALEYLHSKGIIHRDIKP--------DNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCR  173 (258)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCH--------HHeEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcc
Confidence            456789999999999999999999        99999999999999999877664432   2234456778999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH---HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ...+.++|+||+|+++|+++  .|..||.....   .........       .........+.++.+++.+||..||.+|
T Consensus       174 ~~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~p~~R  244 (258)
T cd05578         174 QGYSVAVDWWSLGVTAYECL--RGKRPYRGHSRTIRDQIRAKQET-------ADVLYPATWSTEAIDAINKLLERDPQKR  244 (258)
T ss_pred             cCCCCcccchhhHHHHHHHH--hCCCCCCCCCccHHHHHHHHhcc-------ccccCcccCcHHHHHHHHHHccCChhHc
Confidence            78899999999999999999  56788887653   222221111       1112224467899999999999999999


Q ss_pred             CCH--HHH
Q psy4332         166 PSF--TEI  171 (188)
Q Consensus       166 ps~--~el  171 (188)
                      |++  +|+
T Consensus       245 ~~~~~~~l  252 (258)
T cd05578         245 LGDNLKDL  252 (258)
T ss_pred             CCccHHHH
Confidence            999  666

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0669|consensus

Probab=99.92  E-value=1.7e-24  Score=152.70  Aligned_cols=160  Identities=22%  Similarity=0.285  Sum_probs=117.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc--cccccCCCCCCccccchhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD--YYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..++..++.|+|++.|+|||+|+        .|+|++.+|.+||+|||+++.++...  ..+.......|.+|.+||.+
T Consensus       129 ~Mk~Lm~GL~~iHr~kilHRDmKa--------aNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEll  200 (376)
T KOG0669|consen  129 VMKGLMNGLYYIHRNKILHRDMKA--------ANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELL  200 (376)
T ss_pred             HHHHHHHHHHHHHHhhHHhhcccH--------hhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHh
Confidence            446678899999999999999999        99999999999999999998775432  12233445568999999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhc--ccCCCCCccc--------------CCC------
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISH--LHADDGEFIY--------------LPT------  143 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~--------------~~~------  143 (188)
                      .+. .+..+.|+|+-||++.||+  ++.+-+++........-+..  +..+...++.              .+.      
T Consensus       201 LG~r~yg~~iDiWgAgCimaeMw--trspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv  278 (376)
T KOG0669|consen  201 LGDREYGPPIDIWGAGCIMAEMW--TRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKV  278 (376)
T ss_pred             hcccccCCcchhHhHHHHHHHHH--ccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhh
Confidence            976 4889999999999999999  55666776665554443321  1111111100              000      


Q ss_pred             -----C-CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         144 -----P-QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       144 -----~-~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                           + .-.++..+++.+++..||.+|+++.++  |.||...
T Consensus       279 ~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  279 KNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             hhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence                 0 013578899999999999999999999  7777643

>KOG0612|consensus

Probab=99.92  E-value=3e-25  Score=181.79  Aligned_cols=155  Identities=18%  Similarity=0.267  Sum_probs=128.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ...+|+.|+--+|+.|+|||||||        +|||++..|++||+|||.+-.+...+.. ......|||-|.+||++..
T Consensus       180 Y~aEiVlAldslH~mgyVHRDiKP--------DNvLld~~GHikLADFGsClkm~~dG~V-~s~~aVGTPDYISPEvLqs  250 (1317)
T KOG0612|consen  180 YTAEIVLALDSLHSMGYVHRDIKP--------DNVLLDKSGHIKLADFGSCLKMDADGTV-RSSVAVGTPDYISPEVLQS  250 (1317)
T ss_pred             HHHHHHHHHHHHHhccceeccCCc--------ceeEecccCcEeeccchhHHhcCCCCcE-EeccccCCCCccCHHHHHh
Confidence            345678899999999999999999        9999999999999999999888766543 3456679999999999973


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           +.+...+|.||+|+++|||+  +|..||....-.+...+|.+..   .....+....++.+..+||.+.+ .+|+
T Consensus       251 ~~~~~g~yG~ecDwWSlGV~~YEMl--yG~TPFYadslveTY~KIm~hk---~~l~FP~~~~VSeeakdLI~~ll-~~~e  324 (1317)
T KOG0612|consen  251 QGDGKGEYGRECDWWSLGVFMYEML--YGETPFYADSLVETYGKIMNHK---ESLSFPDETDVSEEAKDLIEALL-CDRE  324 (1317)
T ss_pred             hcCCccccCCccchhhhHHHHHHHH--cCCCcchHHHHHHHHHHHhchh---hhcCCCcccccCHHHHHHHHHHh-cChh
Confidence                 45788999999999999999  7889999998888888887642   22222234568999999999988 5788


Q ss_pred             CCCC---HHHH--HHHHHhc
Q psy4332         164 ERPS---FTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rps---~~el--~~~l~~~  178 (188)
                      .|..   ++++  |+||..+
T Consensus       325 ~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  325 VRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             hhcccccHHHHHhCccccCC
Confidence            8887   9999  8888755

>KOG0574|consensus

Probab=99.92  E-value=4e-26  Score=164.68  Aligned_cols=148  Identities=20%  Similarity=0.314  Sum_probs=121.9

Q ss_pred             hhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcCCCCC
Q psy4332          14 AVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTT   93 (188)
Q Consensus        14 ~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~   93 (188)
                      +.+|.|||...-+|||+|.        .|||++.+|.+||+|||.+..+.+.-.  ......||+.|||||++..-.+..
T Consensus       139 LKGL~YLH~~~KIHRDIKA--------GNILLNT~G~AKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVI~EIGY~~  208 (502)
T KOG0574|consen  139 LKGLQYLHDLKKIHRDIKA--------GNILLNTDGIAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIEEIGYDT  208 (502)
T ss_pred             HhHHHHHHHHHHHHhhccc--------ccEEEcccchhhhhhccccchhhhhHH--hhCccccCcccccHHHHHHhccch
Confidence            4689999999999999999        999999999999999999887754332  235677999999999998778999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--
Q psy4332          94 KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--  171 (188)
Q Consensus        94 ~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--  171 (188)
                      ++||||+|+...||.  .|.+||.+..+....-++    .+.+......+...++++.+|++.||.++|++|-++.++  
T Consensus       209 ~ADIWSLGITaIEMA--EG~PPYsDIHPMRAIFMI----PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  209 KADIWSLGITAIEMA--EGRPPYSDIHPMRAIFMI----PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             hhhHhhhcchhhhhh--cCCCCcccccccceeEec----cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            999999999999999  899999998776655433    222333333345568899999999999999999999998  


Q ss_pred             HHHHHh
Q psy4332         172 HLFLQR  177 (188)
Q Consensus       172 ~~~l~~  177 (188)
                      |.|++.
T Consensus       283 H~Fikn  288 (502)
T KOG0574|consen  283 HTFIKN  288 (502)
T ss_pred             hhhhcC
Confidence            666653

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.91  E-value=1e-24  Score=162.45  Aligned_cols=152  Identities=18%  Similarity=0.243  Sum_probs=112.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++|++|+|+||        .||+++.++.++++|||++........ .......++..|++||.+.+
T Consensus       110 ~~~ql~~~l~~lH~~~~~H~dl~p--------~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  180 (288)
T cd05583         110 YIAEIVLALDHLHQLGIIYRDIKL--------ENILLDSEGHVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRG  180 (288)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCH--------HHeEECCCCCEEEEECccccccccccc-cccccccCCccccCHHHhcC
Confidence            355889999999999999999999        999999999999999999876543321 12223456788999999876


Q ss_pred             CC--CCChhhHHHHHHHHHHHHhCCCCCCCCCCCH----HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          89 RK--FTTKSDVWSFGVTLWEILNLARHRPYEGLTD----LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        89 ~~--~~~~~di~slG~~~~~l~t~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ..  .+.++|+||+|+++++++  .|..||.....    .+....+...       .......++..+.+++.+||+.+|
T Consensus       181 ~~~~~~~~~Dv~slG~il~el~--tg~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p  251 (288)
T cd05583         181 GSGGHDKAVDWWSLGVLTFELL--TGASPFTVDGEQNSQSEISRRILKS-------KPPFPKTMSAEARDFIQKLLEKDP  251 (288)
T ss_pred             CCCCCcchhhhHHHHHHHHHHH--hCCCCcccCcccchHHHHHHHHHcc-------CCCCCcccCHHHHHHHHHHhcCCH
Confidence            54  678999999999999999  56778864321    2222222211       011223467789999999999999


Q ss_pred             CCCCCHHHH-----HHHHHhc
Q psy4332         163 TERPSFTEI-----HLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el-----~~~l~~~  178 (188)
                      ++|||+.++     ++|++.+
T Consensus       252 ~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         252 KKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             hhccCcchHHHHhcCcccccC
Confidence            999997766     4555543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=4e-24  Score=157.44  Aligned_cols=149  Identities=16%  Similarity=0.217  Sum_probs=114.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++|++|+|+||        .||+++.++.++|+|||++......... .......++..|++||.+
T Consensus       110 ~~~~~i~~al~~LH~~~i~H~dl~p--------~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (264)
T cd06653         110 RYTRQILQGVSYLHSNMIVHRDIKG--------ANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVI  181 (264)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCH--------HHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhh
Confidence            3567899999999999999999999        9999999999999999998765321110 111234467789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|+||+|+++++++  .|..||.+.........+...    +.. .......++++.+++.+||. ++..||
T Consensus       182 ~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~----~~~-~~~p~~~~~~~~~~i~~~l~-~~~~r~  253 (264)
T cd06653         182 SGEGYGRKADVWSVACTVVEML--TEKPPWAEYEAMAAIFKIATQ----PTK-PMLPDGVSDACRDFLKQIFV-EEKRRP  253 (264)
T ss_pred             cCCCCCccccHHHHHHHHHHHH--hCCCCCCccCHHHHHHHHHcC----CCC-CCCCcccCHHHHHHHHHHhc-CcccCc
Confidence            8878899999999999999999  567899877655444333211    111 12234567889999999998 579999


Q ss_pred             CHHHHH
Q psy4332         167 SFTEIH  172 (188)
Q Consensus       167 s~~el~  172 (188)
                      ++.+++
T Consensus       254 ~~~~~~  259 (264)
T cd06653         254 TAEFLL  259 (264)
T ss_pred             cHHHHh
Confidence            999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.7e-24  Score=157.82  Aligned_cols=144  Identities=22%  Similarity=0.289  Sum_probs=113.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.++|+++++|+|++|        +||+++.++.++++|||++.......  .......++..|++||...+
T Consensus        98 ~~~qi~~~l~~lh~~~~~H~~l~p--------~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~  167 (250)
T cd05123          98 YAAEIVLALEYLHSLGIIYRDLKP--------ENILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLG  167 (250)
T ss_pred             HHHHHHHHHHHHHHCCceecCCCc--------ceEEEcCCCcEEEeecCcceecccCC--CcccCCcCCccccChHHhCC
Confidence            456788999999999999999999        99999999999999999876654322  12234456778999999987


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ...+.++|+|++|+++++++  .|..||...........+....       .......+..+.+++.+||..||++||++
T Consensus       168 ~~~~~~~D~~slG~~~~~l~--~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~  238 (250)
T cd05123         168 KGYGKAVDWWSLGVLLYEML--TGKPPFYAEDRKEIYEKILKDP-------LRFPEFLSPEARDLISGLLQKDPTKRLGS  238 (250)
T ss_pred             CCCCchhhHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHhcCC-------CCCCCCCCHHHHHHHHHHhcCCHhhCCCc
Confidence            77888999999999999999  5678997776555444443211       11223347899999999999999999999


Q ss_pred             ---HHH
Q psy4332         169 ---TEI  171 (188)
Q Consensus       169 ---~el  171 (188)
                         +++
T Consensus       239 ~~~~~l  244 (250)
T cd05123         239 GGAEEI  244 (250)
T ss_pred             ccHHHH
Confidence               555

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.91  E-value=1.2e-24  Score=162.26  Aligned_cols=153  Identities=20%  Similarity=0.277  Sum_probs=113.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.++.|+|++|++|+|++|        +||+++.++.++|+|||++........ .......++..|++||.+.+
T Consensus       110 ~~~qi~~al~~lH~~~i~H~dl~p--------~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         110 YSGEIVLALEHLHKLGIIYRDIKL--------ENILLDSNGHVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCH--------HHeEECCCCCEEEeeCccceecccccc-cccccccCCcccCChhhccC
Confidence            345788999999999999999999        999999999999999999876533221 12223456778999999875


Q ss_pred             C--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH----HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          89 R--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTD----LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        89 ~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .  ..+.++||||+|+++++++  +|..||.....    ......+...    .   ......++..+.+++.+||..+|
T Consensus       181 ~~~~~~~~~Dv~slG~~l~~ll--~g~~p~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~ll~~~l~~~p  251 (290)
T cd05613         181 GDGGHDKAVDWWSMGVLMYELL--TGASPFTVDGEKNSQAEISRRILKS----E---PPYPQEMSALAKDIIQRLLMKDP  251 (290)
T ss_pred             CCCCCCccccHHHHHHHHHHHh--cCCCCCCcCCccccHHHHHHHhhcc----C---CCCCccCCHHHHHHHHHHhcCCH
Confidence            3  3577899999999999999  56788864322    2222222111    0   11123467789999999999999


Q ss_pred             CCCC-----CHHHH--HHHHHhcc
Q psy4332         163 TERP-----SFTEI--HLFLQRKN  179 (188)
Q Consensus       163 ~~Rp-----s~~el--~~~l~~~~  179 (188)
                      ++||     +++++  |+++++.+
T Consensus       252 ~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         252 KKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHhcCCCCCCHHHHHcCcccccCC
Confidence            9997     78888  67777665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1006|consensus

Probab=99.91  E-value=2.9e-25  Score=157.43  Aligned_cols=145  Identities=20%  Similarity=0.360  Sum_probs=110.3

Q ss_pred             chhhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc--
Q psy4332          12 NLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL--   88 (188)
Q Consensus        12 ~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--   88 (188)
                      ..+.||.||. ...|+|||+||        .|||++..|.+||||||.+..+.++-   ..+.-.|...|||||-+..  
T Consensus       175 atV~AL~yLK~~lkiIHRDvKP--------SNILldr~G~vKLCDFGIcGqLv~Si---AkT~daGCrpYmAPERi~p~~  243 (361)
T KOG1006|consen  175 ATVDALDYLKEELKIIHRDVKP--------SNILLDRHGDVKLCDFGICGQLVDSI---AKTVDAGCRPYMAPERIDPSD  243 (361)
T ss_pred             eehhHHHHHHHHhhhhhccCCh--------hheEEecCCCEeeecccchHhHHHHH---HhhhccCCccccChhccCCcc
Confidence            3456788886 67899999999        99999999999999999988775442   2233445567999999863  


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccC--CCCCChHHHHHHHHHHhccCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYL--PTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ..+.-++|+||+|+.++|+.  +|.+||.++.. .+....++.+   .......  ....++..+..++..|+.+|-+.|
T Consensus       244 ~gyDiRSDvWSLGITL~EvA--tG~fPyr~w~svfeql~~Vv~g---dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~R  318 (361)
T KOG1006|consen  244 KGYDIRSDVWSLGITLYEVA--TGNFPYRKWDSVFEQLCQVVIG---DPPILLFDKECVHYSFSMVRFINTCLIKDRSDR  318 (361)
T ss_pred             CCcchhhhhhhhcceEeeee--cCCCCcchHHHHHHHHHHHHcC---CCCeecCcccccccCHHHHHHHHHHhhcccccC
Confidence            24788999999999999999  67899999864 3334334332   2222111  123468889999999999999999


Q ss_pred             CCHHHHH
Q psy4332         166 PSFTEIH  172 (188)
Q Consensus       166 ps~~el~  172 (188)
                      |++.++.
T Consensus       319 pky~~Lk  325 (361)
T KOG1006|consen  319 PKYDDLK  325 (361)
T ss_pred             cchhhhh
Confidence            9999983

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.91  E-value=7e-25  Score=159.19  Aligned_cols=136  Identities=20%  Similarity=0.206  Sum_probs=102.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.|+|++||+|+|+||        +||+++.++.++++|||.+.......     ....++..|++||.+.
T Consensus        89 ~~~~ql~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y~aPE~~~  155 (237)
T cd05576          89 RWAAEMVVALDALHREGIVCRDLNP--------NNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMYCAPEVGG  155 (237)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCH--------HHEEEcCCCCEEEecccchhcccccc-----ccCCcCccccCCcccC
Confidence            3467888999999999999999999        99999999999999999876553321     2233456699999988


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +...+.++|+||+|+++|++++  |..|+...... ..    .     ... .......+.++.+++.+||+.||++||+
T Consensus       156 ~~~~~~~~DvwslG~il~el~~--g~~~~~~~~~~-~~----~-----~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~~  222 (237)
T cd05576         156 ISEETEACDWWSLGAILFELLT--GKTLVECHPSG-IN----T-----HTT-LNIPEWVSEEARSLLQQLLQFNPTERLG  222 (237)
T ss_pred             CCCCCchhhHHHHHHHHHHHHH--CcchhhcCchh-cc----c-----ccc-cCCcccCCHHHHHHHHHHccCCHHHhcC
Confidence            7778899999999999999995  44554432211 00    0     000 0112346788999999999999999999


Q ss_pred             HH
Q psy4332         168 FT  169 (188)
Q Consensus       168 ~~  169 (188)
                      +.
T Consensus       223 ~~  224 (237)
T cd05576         223 AG  224 (237)
T ss_pred             CC
Confidence            73

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG4236|consensus

Probab=99.91  E-value=1.1e-25  Score=172.60  Aligned_cols=152  Identities=19%  Similarity=0.274  Sum_probs=122.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      +..+|+.||.|||-++|+|+|+||        +|||+.+.   -++||||||+++.+.+..   -.....||+.|+|||+
T Consensus       669 lvtQIL~ALr~LH~knIvHCDLKP--------ENVLLas~~~FPQvKlCDFGfARiIgEks---FRrsVVGTPAYLaPEV  737 (888)
T KOG4236|consen  669 LVTQILVALRYLHFKNIVHCDLKP--------ENVLLASASPFPQVKLCDFGFARIIGEKS---FRRSVVGTPAYLAPEV  737 (888)
T ss_pred             HHHHHHHHHHHhhhcceeeccCCc--------hheeeccCCCCCceeeccccceeecchhh---hhhhhcCCccccCHHH
Confidence            346789999999999999999999        88888654   469999999999886543   2346679999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..+..+-|+||.|+++|--+  .|.+||....  ++.+++.+-.   --.+..+..+++.+..++|..+|+.+-++|
T Consensus       738 LrnkGyNrSLDMWSVGVIiYVsL--SGTFPFNEdE--dIndQIQNAa---FMyPp~PW~eis~~AidlIn~LLqVkm~kR  810 (888)
T KOG4236|consen  738 LRNKGYNRSLDMWSVGVIIYVSL--SGTFPFNEDE--DINDQIQNAA---FMYPPNPWSEISPEAIDLINNLLQVKMRKR  810 (888)
T ss_pred             HhhccccccccceeeeEEEEEEe--cccccCCCcc--chhHHhhccc---cccCCCchhhcCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999877  6779998764  3444443211   112233456788899999999999999999


Q ss_pred             CCHHHH--HHHHHhc
Q psy4332         166 PSFTEI--HLFLQRK  178 (188)
Q Consensus       166 ps~~el--~~~l~~~  178 (188)
                      .+++..  |.|||+-
T Consensus       811 ysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  811 YSVDKSLSHPWLQDY  825 (888)
T ss_pred             cchHhhccchhhhcc
Confidence            999988  8888854

>KOG0586|consensus

Probab=99.90  E-value=6.5e-25  Score=170.25  Aligned_cols=153  Identities=19%  Similarity=0.249  Sum_probs=126.6

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .+..-.++..++.|+|+++|+|||||.        +|++++.+..+||+|||++..+....   .....+|++.|+|||+
T Consensus       157 ar~~F~q~vsaveYcH~k~ivHrdLk~--------eNilL~~~mnikIaDfgfS~~~~~~~---~lqt~cgsppyAaPEl  225 (596)
T KOG0586|consen  157 ARAKFRQIVSAVEYCHSKNIVHRDLKA--------ENILLDENMNIKIADFGFSTFFDYGL---MLQTFCGSPPYAAPEL  225 (596)
T ss_pred             hhhhhHHHHHHHHHHhhcceeccccch--------hhcccccccceeeeccccceeecccc---cccccCCCCCccChHh
Confidence            345567889999999999999999999        99999999999999999988876443   4457788999999999


Q ss_pred             hhcCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          86 VRLRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        86 ~~~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      +.+..+ ...+|+|++|+++|.++  .|..||.+..-.++.++.........       ..++.++.+++.+++.++|.+
T Consensus       226 ~~g~~y~gpe~D~Wslgvvly~LV--~GsLPFDG~~lk~Lr~rvl~gk~rIp-------~~ms~dce~lLrk~lvl~Psk  296 (596)
T KOG0586|consen  226 FNGKKYDGPEVDIWSLGVVLYALV--EGSLPFDGQNLKELRPRVLRGKYRIP-------FYMSCDCEDLLRKFLVLNPSK  296 (596)
T ss_pred             hcCcccCCcceehhhhhhhheeee--ecccccCCcccccccchheeeeeccc-------ceeechhHHHHHHhhccCccc
Confidence            987764 66899999999999999  88999999877777766654433222       335679999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      |++++++  +.|+...
T Consensus       297 r~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  297 RGPCDQIMKDRWRNDL  312 (596)
T ss_pred             cCCHHHhhhhcccchh
Confidence            9999999  5555433

>KOG0664|consensus

Probab=99.90  E-value=1.2e-24  Score=155.18  Aligned_cols=157  Identities=20%  Similarity=0.255  Sum_probs=118.7

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC-
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR-   89 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-   89 (188)
                      -+|++++.|||+.+|.||||||        .|.|++++-..||||||+++....... ........|..|.+||.+.+. 
T Consensus       163 YQILRGLKYLHsA~ILHRDIKP--------GNLLVNSNCvLKICDFGLARvee~d~~-~hMTqEVVTQYYRAPEiLMGaR  233 (449)
T KOG0664|consen  163 YQILRGLKYLHTANILHRDIKP--------GNLLVNSNCILKICDFGLARTWDQRDR-LNMTHEVVTQYYRAPELLMGAR  233 (449)
T ss_pred             HHHHhhhHHHhhcchhhccCCC--------ccEEeccCceEEecccccccccchhhh-hhhHHHHHHHHhccHHHhhcch
Confidence            3688999999999999999999        999999999999999999887643322 223344567889999999875 


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-----------------cCC---------C
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-----------------YLP---------T  143 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~---------~  143 (188)
                      .++...||||.||++.|++  .+..-|+...+.+..+.+.....++....                 ..+         .
T Consensus       234 hYs~AvDiWSVGCIFaELL--gRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS  311 (449)
T KOG0664|consen  234 RYTGAVDIWSVGCIFAELL--QRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIAS  311 (449)
T ss_pred             hhcCccceehhhHHHHHHH--hhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecC
Confidence            4899999999999999999  88899988888777776655444431110                 000         0


Q ss_pred             -CCChHHHHHHHHHHhccCCCCCCCHHHHH--HHHHhc
Q psy4332         144 -PQTTKDILDLMNECWKRSPTERPSFTEIH--LFLQRK  178 (188)
Q Consensus       144 -~~~~~~~~~li~~cl~~dp~~Rps~~el~--~~l~~~  178 (188)
                       ....-+...++.+++..||++|.+.++.+  .++.+.
T Consensus       312 ~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  312 PDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             CcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence             01123466788889999999999999984  444443

>KOG0666|consensus

Probab=99.90  E-value=7.4e-24  Score=153.32  Aligned_cols=162  Identities=20%  Similarity=0.212  Sum_probs=116.9

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCc----ceEEEccCCCCccCCCCcccc-ccCCCCCCccccchh
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK----FEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWE   84 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~----~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe   84 (188)
                      .-+|+.++.|||++=|+|||+||        .||++..+    |++||+|+|+++.+.++...- .......|..|.|||
T Consensus       138 lwQil~Gv~YLH~NWvlHRDLKP--------aNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPE  209 (438)
T KOG0666|consen  138 LWQILDGVHYLHSNWVLHRDLKP--------ANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPE  209 (438)
T ss_pred             HHHHHhhhHHHhhhheeeccCCc--------ceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChH
Confidence            44678899999999999999999        99999877    999999999998886654322 223445688999999


Q ss_pred             hhhcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCC---------HHHHHHHhhcccCCCCCcccCCC-----------
Q psy4332          85 SVRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLT---------DLEVLENISHLHADDGEFIYLPT-----------  143 (188)
Q Consensus        85 ~~~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-----------  143 (188)
                      ++.+.. ++...|+|+.||++.|++|.  .+-|.+..         ..+...++.+....+.....+..           
T Consensus       210 LLLGa~hYT~AiDvWAiGCIfaElLtl--~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls  287 (438)
T KOG0666|consen  210 LLLGARHYTKAIDVWAIGCIFAELLTL--EPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLS  287 (438)
T ss_pred             HhcccccccchhhhHHHHHHHHHHHcc--CccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHH
Confidence            999875 89999999999999999953  34443321         12234444443333222111100           


Q ss_pred             ------------------CC-ChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         144 ------------------PQ-TTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       144 ------------------~~-~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                                        .. -++...+++.++|..||.+|.|+++.  |++|.+...+
T Consensus       288 ~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  288 DFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             HhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence                              00 13348899999999999999999998  7788766443

>KOG3653|consensus

Probab=99.90  E-value=1.3e-23  Score=158.94  Aligned_cols=167  Identities=20%  Similarity=0.206  Sum_probs=120.8

Q ss_pred             CCccccchhhhhhhhc---------ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCC
Q psy4332           6 HRPQASNLAVVPLLRN---------KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL   76 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh---------~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~   76 (188)
                      .++++.-|+.|+.|||         +.+|+|||+|+        .|||+..++++-|+|||++..+.......-.....|
T Consensus       309 ~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS--------kNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVG  380 (534)
T KOG3653|consen  309 LCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS--------KNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVG  380 (534)
T ss_pred             HHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc--------cceEEccCCcEEeeccceeEEecCCCCCcchhhhhh
Confidence            3567888999999997         68999999999        999999999999999999988864433223334679


Q ss_pred             CccccchhhhhcCC-CC-----ChhhHHHHHHHHHHHHhCCCCC----------CCCC-----CCHHHHHHHhhcccCCC
Q psy4332          77 PIRWMAWESVRLRK-FT-----TKSDVWSFGVTLWEILNLARHR----------PYEG-----LTDLEVLENISHLHADD  135 (188)
Q Consensus        77 ~~~~~~Pe~~~~~~-~~-----~~~di~slG~~~~~l~t~~~~~----------p~~~-----~~~~~~~~~~~~~~~~~  135 (188)
                      |.+|||||++.+.. +.     ...||||+|.+++|+.+.+...          ||..     ..-.+..+-++..+.++
T Consensus       381 T~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP  460 (534)
T KOG3653|consen  381 TRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRP  460 (534)
T ss_pred             hhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCC
Confidence            99999999998642 22     2599999999999999754322          2321     11123333344433333


Q ss_pred             CCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         136 GEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .............-+++.+.-||+.||+.|.|+.-+-+.+.++..
T Consensus       461 ~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  461 KIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             CChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            333233334446679999999999999999999999777766643

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=3e-23  Score=150.05  Aligned_cols=149  Identities=23%  Similarity=0.314  Sum_probs=114.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.++.++|+.+++|+|++|        .||+++.++.++++|||.+.......   ......++..|++||...
T Consensus        91 ~~~~~l~~~l~~lh~~~i~h~~i~~--------~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~  159 (244)
T smart00220       91 FYARQILSALEYLHSNGIIHRDLKP--------ENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLL  159 (244)
T ss_pred             HHHHHHHHHHHHHHHcCeecCCcCH--------HHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHc
Confidence            4567788899999999999999999        99999999999999999987665432   223444667799999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-CCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..++.++|+|++|+++++++  .+..||.. ..............    ..........+.++.+++.+||..+|++||
T Consensus       160 ~~~~~~~~Di~slG~~l~~l~--~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  233 (244)
T smart00220      160 GKGYGKAVDVWSLGVILYELL--TGKPPFPGDDQLLELFKKIGKPK----PPFPPPEWKISPEAKDLIRKLLVKDPEKRL  233 (244)
T ss_pred             cCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCcHHHHHHHHhccC----CCCccccccCCHHHHHHHHHHccCCchhcc
Confidence            778888999999999999999  56688877 34344443332211    111111112678999999999999999999


Q ss_pred             CHHHHHH
Q psy4332         167 SFTEIHL  173 (188)
Q Consensus       167 s~~el~~  173 (188)
                      ++.++.+
T Consensus       234 ~~~~~~~  240 (244)
T smart00220      234 TAEEALQ  240 (244)
T ss_pred             CHHHHhh
Confidence            9999853

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0695|consensus

Probab=99.90  E-value=1.7e-23  Score=153.23  Aligned_cols=155  Identities=17%  Similarity=0.287  Sum_probs=119.2

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .|..+.+|..|+.|||++||++||+|.        +|+|++..|.+|++|||.++.--.++  ...+..+||++|.|||.
T Consensus       353 arfys~ei~lal~flh~rgiiyrdlkl--------dnvlldaeghikltdygmcke~l~~g--d~tstfcgtpnyiapei  422 (593)
T KOG0695|consen  353 ARFYSAEICLALNFLHERGIIYRDLKL--------DNVLLDAEGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEI  422 (593)
T ss_pred             hhhhhHHHHHHHHHHhhcCeeeeeccc--------cceEEccCCceeecccchhhcCCCCC--cccccccCCCcccchhh
Confidence            345567889999999999999999999        99999999999999999987654443  35578899999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-------CCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEG-------LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      +.+..+..++|.|++|++++||+  .|..||.-       .+.++..-++.-.      .....+...+.....++..-|
T Consensus       423 lrgeeygfsvdwwalgvlmfemm--agrspfdivgm~n~d~ntedylfqvile------kqiriprslsvkas~vlkgfl  494 (593)
T KOG0695|consen  423 LRGEEYGFSVDWWALGVLMFEMM--AGRSPFDIVGMDNPDMNTEDYLFQVILE------KQIRIPRSLSVKASHVLKGFL  494 (593)
T ss_pred             hcccccCceehHHHHHHHHHHHH--cCCCCcceecCCCcccchhHHHHHHHhh------hcccccceeehhhHHHHHHhh
Confidence            99999999999999999999999  67788841       2222333222211      111122344567778889999


Q ss_pred             ccCCCCCCC------HHHH--HHHHHhc
Q psy4332         159 KRSPTERPS------FTEI--HLFLQRK  178 (188)
Q Consensus       159 ~~dp~~Rps------~~el--~~~l~~~  178 (188)
                      .+||.+|..      +.++  |++|..+
T Consensus       495 nkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  495 NKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             cCCcHHhcCCCcccchhhhhcchhhhhC
Confidence            999999875      4455  7777754

>KOG1025|consensus

Probab=99.89  E-value=1e-22  Score=162.91  Aligned_cols=154  Identities=32%  Similarity=0.587  Sum_probs=127.2

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      +-||+.|+.|||+++++||||-.        .|||+.+...+|+.|||+++........-......-++.|+|-|.+...
T Consensus       804 ~~QIAkgM~YLe~qrlVHrdLaa--------RNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~  875 (1177)
T KOG1025|consen  804 CYQIAKGMKYLEEQRLVHRDLAA--------RNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIR  875 (1177)
T ss_pred             HHHHHHHHHHHHhcchhhhhhhh--------hheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhcc
Confidence            45788999999999999999999        9999999999999999999887655432233344456789999999999


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHH
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFT  169 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~  169 (188)
                      .++.++|||+||+.+||++| .|..|+.+....++..-+..     +.+.. .++.++.++.-++.+||..|+..||+|+
T Consensus       876 ~~thqSDVWsfGVtiWElmT-FGa~Py~gi~~~eI~dlle~-----geRLs-qPpiCtiDVy~~mvkCwmid~~~rp~fk  948 (1177)
T KOG1025|consen  876 KYTHQSDVWSFGVTIWELMT-FGAKPYDGIPAEEIPDLLEK-----GERLS-QPPICTIDVYMVMVKCWMIDADSRPTFK  948 (1177)
T ss_pred             CCCchhhhhhhhhhHHHHHh-cCCCccCCCCHHHhhHHHhc-----cccCC-CCCCccHHHHHHHHHHhccCcccCccHH
Confidence            99999999999999999999 57899999987776655432     22222 2356788999999999999999999999


Q ss_pred             HHHHHHHhc
Q psy4332         170 EIHLFLQRK  178 (188)
Q Consensus       170 el~~~l~~~  178 (188)
                      ++...|.+.
T Consensus       949 el~~~fs~~  957 (1177)
T KOG1025|consen  949 ELAEEFSRM  957 (1177)
T ss_pred             HHHHHHHHH
Confidence            997766654

>KOG0587|consensus

Probab=99.89  E-value=7.2e-24  Score=170.04  Aligned_cols=152  Identities=22%  Similarity=0.321  Sum_probs=123.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.+||.+.++|||+|.        .|||++.++.+|++|||.+.......  .......||+.|||||++.-
T Consensus       128 I~re~lrgl~HLH~nkviHRDikG--------~NiLLT~e~~VKLvDFGvSaQldsT~--grRnT~iGtP~WMAPEViac  197 (953)
T KOG0587|consen  128 ILREILRGLAHLHNNKVIHRDIKG--------QNVLLTENAEVKLVDFGVSAQLDSTV--GRRNTFIGTPYWMAPEVIAC  197 (953)
T ss_pred             HHHHHHHHHHHHhhcceeeecccC--------ceEEEeccCcEEEeeeeeeeeeeccc--ccccCcCCCcccccceeeec
Confidence            356778899999999999999999        99999999999999999988775432  34567789999999999862


Q ss_pred             -----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          89 -----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        89 -----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                           ..++..+|+||+|++..|+.  .|.+|+.++.+....-.+-.    .+..........+.++.+||..||.+|.+
T Consensus       198 ~e~~d~tyd~R~D~WsLGITaIEla--dG~PPl~DmHPmraLF~IpR----NPPPkLkrp~kWs~~FndFIs~cL~Kd~e  271 (953)
T KOG0587|consen  198 DESPDATYDYRSDLWSLGITAIEMA--EGAPPLCDMHPMRALFLIPR----NPPPKLKRPKKWSKKFNDFISTCLVKDYE  271 (953)
T ss_pred             ccCCCCCcccccchhhccceeehhc--CCCCCccCcchhhhhccCCC----CCCccccchhhHHHHHHHHHHHHHhhccc
Confidence                 24667899999999999999  88999999887766543321    12222222356688999999999999999


Q ss_pred             CCCCHHHH--HHHHH
Q psy4332         164 ERPSFTEI--HLFLQ  176 (188)
Q Consensus       164 ~Rps~~el--~~~l~  176 (188)
                      +||++.++  |+|++
T Consensus       272 ~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  272 QRPSTEELLKHPFIT  286 (953)
T ss_pred             cCcchhhhccCCccc
Confidence            99999998  77766

>KOG0662|consensus

Probab=99.89  E-value=5.6e-23  Score=138.61  Aligned_cols=159  Identities=21%  Similarity=0.232  Sum_probs=125.0

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ...+++.++.++|++.+.|||+||        .|.+++.+|..|++|||+++.++.+.  +-.+....|..|.+|.++.+
T Consensus       106 fmlqllrgl~fchshnvlhrdlkp--------qnllin~ngelkladfglarafgipv--rcysaevvtlwyrppdvlfg  175 (292)
T KOG0662|consen  106 FMLQLLRGLGFCHSHNVLHRDLKP--------QNLLINRNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFG  175 (292)
T ss_pred             HHHHHHhhhhhhhhhhhhhccCCc--------ceEEeccCCcEEecccchhhhcCCce--EeeeceeeeeeccCcceeee
Confidence            345788999999999999999999        99999999999999999999886554  34556677899999999998


Q ss_pred             CC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCC---------C-------------CC
Q psy4332          89 RK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP---------T-------------PQ  145 (188)
Q Consensus        89 ~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------------~~  145 (188)
                      .+ ++.+-|+||-||++.|+.. .|.+-|.+.+-.+...++......+.+...+.         .             +.
T Consensus       176 akly~tsidmwsagcifaelan-agrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~  254 (292)
T KOG0662|consen  176 AKLYSTSIDMWSAGCIFAELAN-AGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPK  254 (292)
T ss_pred             eehhccchHhhhcchHHHHHhh-cCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhh
Confidence            76 7889999999999999986 46677888776667666665443332221110         0             12


Q ss_pred             ChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         146 TTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       146 ~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ....-++++++.+.-+|..|.++++.  |++|.+.
T Consensus       255 lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  255 LNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             hcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence            23457889999999999999999988  6666653

>KOG0608|consensus

Probab=99.88  E-value=1.9e-23  Score=163.34  Aligned_cols=154  Identities=22%  Similarity=0.268  Sum_probs=119.0

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCC---------CCcc--------------
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF---------SSDY--------------   67 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~---------~~~~--------------   67 (188)
                      .++.+|+.+.|+.|+|||||||        +|||||.+|++||+|||++..+.         ++.-              
T Consensus       736 AEltcAiesVHkmGFIHRDiKP--------DNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d  807 (1034)
T KOG0608|consen  736 AELTCAIESVHKMGFIHRDIKP--------DNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWAD  807 (1034)
T ss_pred             HHHHHHHHHHHhccceecccCc--------cceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhcc
Confidence            4677899999999999999999        99999999999999999975431         1000              


Q ss_pred             -----------------ccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhc
Q psy4332          68 -----------------YRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISH  130 (188)
Q Consensus        68 -----------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~  130 (188)
                                       ........||++|+|||++....++..+|.||.|+++|||+  -|..||....+.+...++.+
T Consensus       808 ~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~--~g~~pf~~~tp~~tq~kv~n  885 (1034)
T KOG0608|consen  808 ISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML--VGQPPFLADTPGETQYKVIN  885 (1034)
T ss_pred             ccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh--hCCCCccCCCCCcceeeeee
Confidence                             00112456899999999999888999999999999999999  78899999888787777776


Q ss_pred             ccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC---CHHHH--HHHHHhc
Q psy4332         131 LHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP---SFTEI--HLFLQRK  178 (188)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---s~~el--~~~l~~~  178 (188)
                      |.   ......+..+.+.++.++|.+++ -+++.|.   .+++|  |+||+.|
T Consensus       886 w~---~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  886 WR---NFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             hh---hccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCcccccc
Confidence            54   23334445667889999888755 3566676   35557  7777754

>KOG0607|consensus

Probab=99.88  E-value=4.1e-23  Score=150.02  Aligned_cols=160  Identities=22%  Similarity=0.291  Sum_probs=118.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccCCCCc-----cccccCCCCCCc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSD-----YYRVHDNTSLPI   78 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~   78 (188)
                      +++.++|+.||-+||.+||+|||+||        +|||-.+.+.   +|||||.+.......+     .........|+.
T Consensus       179 s~vvkdia~aLdFlH~kgIAHRDlKP--------ENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSA  250 (463)
T KOG0607|consen  179 SRVVKDIASALDFLHTKGIAHRDLKP--------ENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSA  250 (463)
T ss_pred             HHHHHHHHHHHHHHhhcCcccccCCc--------cceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccch
Confidence            45667899999999999999999999        8888765543   7999998765442211     112223455777


Q ss_pred             cccchhhhh---cC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---------------HHHHHHHhhcccCCCCCc
Q psy4332          79 RWMAWESVR---LR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLT---------------DLEVLENISHLHADDGEF  138 (188)
Q Consensus        79 ~~~~Pe~~~---~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---------------~~~~~~~~~~~~~~~~~~  138 (188)
                      .|||||+..   +.  .+..++|.||+|+++|-|+  .|..||.+.=               ...+.+.+..+.++.+..
T Consensus       251 EfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImL--sGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdk  328 (463)
T KOG0607|consen  251 EFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIML--SGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK  328 (463)
T ss_pred             hhcchhHHhhhccccccccccccHHHHHHHHHHHH--hCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChh
Confidence            899999864   22  4778999999999999999  6778986531               123556666555433332


Q ss_pred             ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      .   ...++++..++++.++..|+..|.++.++  |+|++...
T Consensus       329 d---WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  329 D---WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             h---hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            2   34568899999999999999999999999  78888664

>KOG0670|consensus

Probab=99.87  E-value=4.6e-24  Score=163.32  Aligned_cols=157  Identities=23%  Similarity=0.302  Sum_probs=115.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      +..|.+|..||.+|...||+|.||||        +|||++.. +.+||||||.+.......-+    ....+..|.|||.
T Consensus       539 RsYaqQLflALklLK~c~vlHaDIKP--------DNiLVNE~k~iLKLCDfGSA~~~~eneit----PYLVSRFYRaPEI  606 (752)
T KOG0670|consen  539 RSYAQQLFLALKLLKKCGVLHADIKP--------DNILVNESKNILKLCDFGSASFASENEIT----PYLVSRFYRAPEI  606 (752)
T ss_pred             HHHHHHHHHHHHHHHhcCeeecccCc--------cceEeccCcceeeeccCcccccccccccc----HHHHHHhccCcce
Confidence            45678888999999999999999999        99999876 45799999998776543211    1122335999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc-------------------------
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-------------------------  140 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  140 (188)
                      +.|..+.+.-|+||+||++||++  +|..-|++......+.-.+......+....                         
T Consensus       607 iLG~~yd~~iD~WSvgctLYElY--tGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT  684 (752)
T KOG0670|consen  607 ILGLPYDYPIDTWSVGCTLYELY--TGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVT  684 (752)
T ss_pred             eecCcccCCccceeeceeeEEee--ccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccc
Confidence            99999999999999999999999  567788777665544333322211111000                         


Q ss_pred             ----------------------------CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHh
Q psy4332         141 ----------------------------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       141 ----------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~  177 (188)
                                                  ...+....++.+|+.+|+..||++|.++.++  |+||+.
T Consensus       685 ~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  685 EREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             cceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                                        0011123568999999999999999999998  777763

>KOG0984|consensus

Probab=99.87  E-value=1e-22  Score=139.77  Aligned_cols=110  Identities=26%  Similarity=0.343  Sum_probs=87.5

Q ss_pred             ccccchhhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ++|.-++.|+.||| +-.++|||+||        .|||++..|++|+||||.+..+.++....   .-.|...|+|||-+
T Consensus       152 kIa~Svv~al~~L~~kL~vIHRDvKP--------sNiLIn~~GqVKiCDFGIsG~L~dSiAkt---~daGCkpYmaPEri  220 (282)
T KOG0984|consen  152 KIAVSVVHALEFLHSKLSVIHRDVKP--------SNILINYDGQVKICDFGISGYLVDSIAKT---MDAGCKPYMAPERI  220 (282)
T ss_pred             HhHHHHHHHHHHHHHHhhhhhccCCc--------ceEEEccCCcEEEcccccceeehhhhHHH---HhcCCCccCChhhc
Confidence            35566778999999 46899999999        99999999999999999998876554322   22344569999988


Q ss_pred             hc----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhc
Q psy4332          87 RL----RKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISH  130 (188)
Q Consensus        87 ~~----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~  130 (188)
                      ..    ..++.++||||+|+.+.|+.  .+.+||..+ .+.++..+++.
T Consensus       221 ~~e~n~~gY~vksDvWSLGItmiElA--~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  221 NPELNQKGYSVKSDVWSLGITMIEMA--ILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             CcccCcccceeehhhhhhhhhhhhhh--hccccccccCCHHHHHHHHhc
Confidence            62    35888999999999999999  567898876 46677777764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.87  E-value=8.8e-23  Score=174.03  Aligned_cols=158  Identities=18%  Similarity=0.221  Sum_probs=109.4

Q ss_pred             CCccccchhhhhhhhc---ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           6 HRPQASNLAVVPLLRN---KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh---~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      +..++.+++.|+.|+|   +++|+|||+||        .||+++.++..++. |+.......      .....++..|+|
T Consensus       782 ~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp--------~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~a  846 (968)
T PLN00113        782 RRKIAIGIAKALRFLHCRCSPAVVVGNLSP--------EKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVA  846 (968)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeecCCCCH--------HhEEECCCCceEEE-ecccccccc------CCCccccccccC
Confidence            3457889999999999   77999999999        99999988877765 554332211      122356788999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-----HHHHHHhhccc-CC---CCC--cccCCCCCChHHHH
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-----LEVLENISHLH-AD---DGE--FIYLPTPQTTKDIL  151 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-----~~~~~~~~~~~-~~---~~~--~~~~~~~~~~~~~~  151 (188)
                      ||++.+..++.++||||||+++||++|  |..||.....     .++........ ..   .+.  ...........++.
T Consensus       847 PE~~~~~~~~~~sDv~S~Gvvl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  924 (968)
T PLN00113        847 PETRETKDITEKSDIYGFGLILIELLT--GKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM  924 (968)
T ss_pred             cccccCCCCCcccchhhHHHHHHHHHh--CCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHH
Confidence            999988889999999999999999995  5677743211     11111100000 00   000  00001112234678


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         152 DLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       152 ~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      +++.+||+.||++||+++|+++.|+++.+
T Consensus       925 ~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        925 NLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            89999999999999999999999998755

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.87  E-value=5.9e-22  Score=162.63  Aligned_cols=97  Identities=21%  Similarity=0.286  Sum_probs=77.2

Q ss_pred             CCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          76 LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        76 ~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      ||+.|+|||++.+..++.++||||+||++||++  +|..||.+....+....+.........    .....+..+.+++.
T Consensus       542 GT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ell--tG~~pf~~~~~~~~~~~il~~~~~~p~----~~~~~~~~~~~~l~  615 (669)
T cd05610         542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFL--TGIPPFNDETPQQVFQNILNRDIPWPE----GEEKLSVNAQNAIE  615 (669)
T ss_pred             eCccccCHHHcCCCCCCcHHHHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhcCCCCCc----ccccCCHHHHHHHH
Confidence            478899999999888999999999999999999  567899888777766665432211111    11245678999999


Q ss_pred             HHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         156 ECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      +||..||++||++.++  |+||..+
T Consensus       616 ~lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         616 ILLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             HHcccChhHCcCHHHHHhCHhhcCC
Confidence            9999999999999999  7888764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0668|consensus

Probab=99.86  E-value=7.5e-22  Score=137.64  Aligned_cols=165  Identities=16%  Similarity=0.247  Sum_probs=119.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ...+++.|+-|+|+.||.|||+||        .|++++... ..+|+|+|++...-.+..++....   +..|--||.+.
T Consensus       137 Y~~elLkALdyCHS~GImHRDVKP--------hNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVA---SRyfKGPELLV  205 (338)
T KOG0668|consen  137 YIYELLKALDYCHSMGIMHRDVKP--------HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA---SRYFKGPELLV  205 (338)
T ss_pred             HHHHHHHHHhHHHhcCcccccCCc--------ceeeechhhceeeeeecchHhhcCCCceeeeeee---hhhcCCchhee
Confidence            346788999999999999999999        999999764 489999999877766555544322   33477899998


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCC-CCCHHHHHHHhhcccCCCCC--------------------------cc
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYE-GLTDLEVLENISHLHADDGE--------------------------FI  139 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~-~~~~~~~~~~~~~~~~~~~~--------------------------~~  139 (188)
                      .. .+..+-|+|||||++..|.  ....||. +.+..++.-++.....+...                          +.
T Consensus       206 dy~~YDYSLD~WS~GcmlA~mi--FrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~  283 (338)
T KOG0668|consen  206 DYQMYDYSLDMWSLGCMLASMI--FRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWS  283 (338)
T ss_pred             echhccccHHHHHHHHHHHHHH--hccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHH
Confidence            54 4789999999999999998  5667764 44444443333222211100                          00


Q ss_pred             c----CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCCC
Q psy4332         140 Y----LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPM  186 (188)
Q Consensus       140 ~----~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~~  186 (188)
                      .    ......+++..+++.+.|..|-.+|+|++|.  |++|..+......+.
T Consensus       284 ~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~~~~~  336 (338)
T KOG0668|consen  284 RFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAESSRM  336 (338)
T ss_pred             HhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHhhccc
Confidence            0    0112236889999999999999999999999  899998876655553

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.86  E-value=1.3e-21  Score=154.63  Aligned_cols=159  Identities=18%  Similarity=0.188  Sum_probs=106.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|+++|+|+|+||        .||+++.++.+||+|||++......... ......+++.|++||.+..
T Consensus       314 i~~ql~~aL~~lH~~~ivHrDLKp--------~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        314 VMRQVLTGLRKLHRIGIVHRDIKP--------ENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCch--------HhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChhhhcC
Confidence            466788899999999999999999        9999999999999999998765433211 1122334678999998753


Q ss_pred             CC----------------------CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH--HH--HH-hhccc-CCCCCccc
Q psy4332          89 RK----------------------FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE--VL--EN-ISHLH-ADDGEFIY  140 (188)
Q Consensus        89 ~~----------------------~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~--~~--~~-~~~~~-~~~~~~~~  140 (188)
                      ..                      ...+.|+||+||++++|+++ ...||.+.....  ..  .. ...+. ........
T Consensus       385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~-~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~  463 (507)
T PLN03224        385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVP-ELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF  463 (507)
T ss_pred             CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhC-CCCCccchhhhhhHHhhccchHHHHHhhcccCCCc
Confidence            22                      12347999999999999953 233654321111  00  00 00000 01111112


Q ss_pred             CCCCCChHHHHHHHHHHhccCC---CCCCCHHHH--HHHHHh
Q psy4332         141 LPTPQTTKDILDLMNECWKRSP---TERPSFTEI--HLFLQR  177 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp---~~Rps~~el--~~~l~~  177 (188)
                      ......+++.++++.+||..+|   .+|+|++|+  |+||..
T Consensus       464 ~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        464 SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            2234567899999999999766   689999999  888753

>KOG1151|consensus

Probab=99.83  E-value=3.5e-21  Score=145.64  Aligned_cols=155  Identities=21%  Similarity=0.329  Sum_probs=115.2

Q ss_pred             cccchhhhhhhhc--ccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCcccc-----ccCCCCCCc
Q psy4332           9 QASNLAVVPLLRN--KNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYR-----VHDNTSLPI   78 (188)
Q Consensus         9 ~~~~~~~~~~~lh--~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~   78 (188)
                      +--+|+.||.||.  +..|+|-||||        .|||+..   .|.+||+|||+++.+.......     ..+...||.
T Consensus       573 IiMQiVnAL~YLNEikpPIIHYDLKP--------gNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTY  644 (775)
T KOG1151|consen  573 IIMQIVNALKYLNEIKPPIIHYDLKP--------GNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTY  644 (775)
T ss_pred             HHHHHHHHHHHHhccCCCeeeeccCC--------ccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCcee
Confidence            3446778999998  67899999999        7887643   3679999999999886543221     234566899


Q ss_pred             cccchhhhhcC----CCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHhhcccCCCCCcccCCCCCChHHHHHH
Q psy4332          79 RWMAWESVRLR----KFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTKDILDL  153 (188)
Q Consensus        79 ~~~~Pe~~~~~----~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (188)
                      +|++||++.-+    +.+.|+||||+|+++|.++  +|..||...- ..++.+...  .....+...++.+..+.+..+|
T Consensus       645 WYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQCl--YGrKPFGhnqsQQdILqeNT--IlkAtEVqFP~KPvVsseAkaF  720 (775)
T KOG1151|consen  645 WYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCL--YGRKPFGHNQSQQDILQENT--ILKATEVQFPPKPVVSSEAKAF  720 (775)
T ss_pred             eecCcceeecCCCCCccccceeeEeeehhhhhhh--ccCCCCCCchhHHHHHhhhc--hhcceeccCCCCCccCHHHHHH
Confidence            99999998744    4688999999999999999  7889998653 233332211  1112233344556778999999


Q ss_pred             HHHHhccCCCCCCCHHHH--HHHH
Q psy4332         154 MNECWKRSPTERPSFTEI--HLFL  175 (188)
Q Consensus       154 i~~cl~~dp~~Rps~~el--~~~l  175 (188)
                      |++||+..-+.|..+.++  +++|
T Consensus       721 IRRCLaYRKeDR~DV~qLA~dpyl  744 (775)
T KOG1151|consen  721 IRRCLAYRKEDRIDVQQLACDPYL  744 (775)
T ss_pred             HHHHHHhhhhhhhhHHHHccCccc
Confidence            999999999999999998  4544

>KOG4250|consensus

Probab=99.83  E-value=4.4e-21  Score=151.30  Aligned_cols=155  Identities=20%  Similarity=0.314  Sum_probs=107.0

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEc--Ccce--EEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG--KKFE--IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~--~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ..++..|+.|||++||+||||||        .||++-  .+|+  -||+|||.++...++.   ...+..||..|++||.
T Consensus       126 L~d~~~al~~LrEn~IvHRDlKP--------~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel  194 (732)
T KOG4250|consen  126 LSDLVSALRHLRENGIVHRDLKP--------GNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPEL  194 (732)
T ss_pred             HHHHHHHHHHHHHcCceeccCCC--------CcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHH
Confidence            45677899999999999999999        777653  3333  5999999999987665   5567889999999999


Q ss_pred             hh-cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH----H-HHHhhcccCC-----------C-CCcccCCCC-CC
Q psy4332          86 VR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE----V-LENISHLHAD-----------D-GEFIYLPTP-QT  146 (188)
Q Consensus        86 ~~-~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~----~-~~~~~~~~~~-----------~-~~~~~~~~~-~~  146 (188)
                      .. +..++..+|.|||||++|++.  +|..||.......    . +..+......           + .....+|.+ ..
T Consensus       195 ~E~q~~y~~tVDLWS~GvtlY~ca--TG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~L  272 (732)
T KOG4250|consen  195 YERQKKYTATVDLWSFGVTLYECA--TGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHL  272 (732)
T ss_pred             HhhccCcCceeehhhhhhHHHHHh--ccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccc
Confidence            98 578999999999999999999  5678886543221    1 1111110000           0 000111111 11


Q ss_pred             ----hHHHHHHHHHHhccCCCCCC--CHHHHHHHHHh
Q psy4332         147 ----TKDILDLMNECWKRSPTERP--SFTEIHLFLQR  177 (188)
Q Consensus       147 ----~~~~~~li~~cl~~dp~~Rp--s~~el~~~l~~  177 (188)
                          ...+-..+..+|..+|++|-  .+.+....+..
T Consensus       273 s~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~d  309 (732)
T KOG4250|consen  273 SRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDD  309 (732)
T ss_pred             cHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHH
Confidence                23466778888999999998  66666444443

>KOG0590|consensus

Probab=99.83  E-value=1.2e-21  Score=157.63  Aligned_cols=169  Identities=17%  Similarity=0.098  Sum_probs=128.9

Q ss_pred             CcccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCcc
Q psy4332           2 GMLRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIR   79 (188)
Q Consensus         2 ~~l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~   79 (188)
                      ..++....-++++.++.|+|+.||.|||+|+        +|+++..+|.+||+|||.+..+..+.+.  .......|+-+
T Consensus       418 ~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~--------enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~p  489 (601)
T KOG0590|consen  418 TPLEADCFFKQLLRGVKYLHSMGLAHRDLKL--------ENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDP  489 (601)
T ss_pred             chhhhhHHHHHHHHHHHHHHhcCceeccCcc--------ccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCc
Confidence            4455666778899999999999999999999        9999999999999999998777655544  34456678888


Q ss_pred             ccchhhhhcCCCCC-hhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHH--HHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          80 WMAWESVRLRKFTT-KSDVWSFGVTLWEILNLARHRPYEGLTDLEVL--ENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~-~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      |+|||.+....+.. ..||||.|+++..|.  .+.+||.-....+..  .....................+.+.+.++.+
T Consensus       490 Y~apE~~~~~~ydpr~vDiwS~~ii~~~m~--~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~  567 (601)
T KOG0590|consen  490 YLAPEVLTGKEYDPRAVDVWSCGIIYICMI--LGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYR  567 (601)
T ss_pred             CcCcccccccccCcchhhhhhccceEEEEe--cCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHH
Confidence            99999999888754 699999999999999  568898765432221  1111111111122222334567889999999


Q ss_pred             HhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         157 CWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       157 cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ||+.+|.+|.+++++  -+|++++.-
T Consensus       568 ~l~~~P~~R~ti~~i~~d~W~~~i~~  593 (601)
T KOG0590|consen  568 MLQLDPTKRITIEQILNDEWIRSIEC  593 (601)
T ss_pred             HccCChhheecHHHHhhChHhhhcce
Confidence            999999999999999  579998754

>KOG2052|consensus

Probab=99.81  E-value=4.5e-20  Score=139.02  Aligned_cols=161  Identities=24%  Similarity=0.322  Sum_probs=112.8

Q ss_pred             cccchhhhhhhhc--------ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-c-ccCCCCCCc
Q psy4332           9 QASNLAVVPLLRN--------KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-R-VHDNTSLPI   78 (188)
Q Consensus         9 ~~~~~~~~~~~lh--------~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~-~~~~~~~~~   78 (188)
                      ++.-++.||.|||        +..|+|||||+        .|||+..++.+-|+|+|++......... . ......||.
T Consensus       313 LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS--------KNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTK  384 (513)
T KOG2052|consen  313 LALSIASGLAHLHMEIVGTQGKPAIAHRDLKS--------KNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTK  384 (513)
T ss_pred             HHHHHhhhHHHHHHHHhcCCCCchhhcccccc--------ccEEEccCCcEEEeeceeeEEecccCCcccCCCCCcccee
Confidence            4556778999999        68899999999        9999999999999999998766543211 1 224566899


Q ss_pred             cccchhhhhcCC----C-CC-hhhHHHHHHHHHHHHhC--------CCCCCCCCCCH----HHHHHHhhcccCCCCCccc
Q psy4332          79 RWMAWESVRLRK----F-TT-KSDVWSFGVTLWEILNL--------ARHRPYEGLTD----LEVLENISHLHADDGEFIY  140 (188)
Q Consensus        79 ~~~~Pe~~~~~~----~-~~-~~di~slG~~~~~l~t~--------~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~  140 (188)
                      +|||||++...-    | ++ .+||||||.+++|++-.        ....||.+..+    .+...+++..   ...++.
T Consensus       385 RYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv---~~~RP~  461 (513)
T KOG2052|consen  385 RYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCV---QKLRPN  461 (513)
T ss_pred             eccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceee---cccCCC
Confidence            999999986321    1 22 59999999999999721        11456655422    2223233221   122222


Q ss_pred             CC----CCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         141 LP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       141 ~~----~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .+    .......+.++|+.||..+|..|.|+-.+.+.|.++.+
T Consensus       462 ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  462 IPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            22    12223457789999999999999999999999988864

>KOG1345|consensus

Probab=99.80  E-value=3.9e-20  Score=131.91  Aligned_cols=149  Identities=14%  Similarity=0.160  Sum_probs=103.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc--CcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG--KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++.++|||||.        +|||+-  +..++|+||||.+...+....+..     .+..|-+||.
T Consensus       125 ~v~~ql~SAi~fMHsknlVHRdlK~--------eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~-----~~~~y~~pe~  191 (378)
T KOG1345|consen  125 KVFAQLLSAIEFMHSKNLVHRDLKA--------ENILIFDADFYRVKLCDFGLTRKVGTTVKYLE-----YVNNYHAPEL  191 (378)
T ss_pred             HHHHHHHHHHHHhhccchhhccccc--------ceEEEecCCccEEEeeecccccccCceehhhh-----hhcccCCcHH
Confidence            4567889999999999999999999        777763  335799999999887765543322     2234778877


Q ss_pred             hhc---C--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhc
Q psy4332          86 VRL---R--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK  159 (188)
Q Consensus        86 ~~~---~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  159 (188)
                      +..   +  .....+|+|.||+++|.++  +|.+||+...- ....-+...+..+.....+.....+++.+..+.++-+.
T Consensus       192 ~~~~~ne~~~~~ps~D~WqfGIi~f~cl--tG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt  269 (378)
T KOG1345|consen  192 CDTVVNEKLVVNPSTDIWQFGIIFFYCL--TGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLT  269 (378)
T ss_pred             HhhccccceEecccccchheeeeeeeee--cCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcC
Confidence            642   2  3567899999999999999  67899985321 11111222222223333333335568889999999999


Q ss_pred             cCCCCCCCHHHH
Q psy4332         160 RSPTERPSFTEI  171 (188)
Q Consensus       160 ~dp~~Rps~~el  171 (188)
                      .++++|-...++
T Consensus       270 ~~~~drcki~~~  281 (378)
T KOG1345|consen  270 PRFKDRCKIWTA  281 (378)
T ss_pred             CcccccchhHHH
Confidence            999999655555

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.78  E-value=5.9e-19  Score=124.63  Aligned_cols=117  Identities=26%  Similarity=0.387  Sum_probs=98.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|++|++|+|++|        .||+++. ++.++++||+.+........  ......+...|++||.+
T Consensus        96 ~~~~~l~~~l~~lh~~~~~H~dl~~--------~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~  165 (215)
T cd00180          96 RILLQILEGLEYLHSNGIIHRDLKP--------ENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVL  165 (215)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCH--------hhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHh
Confidence            4567888999999999999999999        9999998 88999999998776544321  12234456679999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ... ..+.+.|+|++|++++++                                        ..+.+++.+|+..+|++|
T Consensus       166 ~~~~~~~~~~D~~~lg~~~~~l----------------------------------------~~~~~~l~~~l~~~p~~R  205 (215)
T cd00180         166 LGKGYYSEKSDIWSLGVILYEL----------------------------------------PELKDLIRKMLQKDPEKR  205 (215)
T ss_pred             cccCCCCchhhhHHHHHHHHHH----------------------------------------HHHHHHHHHHhhCCcccC
Confidence            876 778899999999999998                                        489999999999999999


Q ss_pred             CCHHHHHHH
Q psy4332         166 PSFTEIHLF  174 (188)
Q Consensus       166 ps~~el~~~  174 (188)
                      |++.++...
T Consensus       206 ~~~~~l~~~  214 (215)
T cd00180         206 PSAKEILEH  214 (215)
T ss_pred             cCHHHHhhC
Confidence            999988653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1290|consensus

Probab=99.77  E-value=3.2e-19  Score=135.88  Aligned_cols=104  Identities=17%  Similarity=0.255  Sum_probs=69.6

Q ss_pred             CCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC------HHHHHHHhhcccCCCCC-----------
Q psy4332          75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT------DLEVLENISHLHADDGE-----------  137 (188)
Q Consensus        75 ~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~------~~~~~~~~~~~~~~~~~-----------  137 (188)
                      ..|.-|.+||++.+..|+..+||||++|+++||+|  |.+-|....      +.+-+..+++.....+.           
T Consensus       412 IQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaT--GDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRd  489 (590)
T KOG1290|consen  412 IQTRQYRAPEVLLGSGYSTSADIWSTACMAFELAT--GDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRD  489 (590)
T ss_pred             hhhhhccCcceeecCCCCCchhHHHHHHHHHHhhc--CceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHh
Confidence            34667999999999999999999999999999995  445553211      12222222211111100           


Q ss_pred             -------------cccCC-----------CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         138 -------------FIYLP-----------TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       138 -------------~~~~~-----------~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                                   ....+           ......++.+|+.-||+.+|++|||+.++  |+||...-.
T Consensus       490 FFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  490 FFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             hhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence                         00000           11124668999999999999999999999  899986644

>KOG0606|consensus

Probab=99.76  E-value=9.9e-19  Score=143.50  Aligned_cols=154  Identities=21%  Similarity=0.280  Sum_probs=121.8

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCC---cc--------cc--ccCCCCCC
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS---DY--------YR--VHDNTSLP   77 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~---~~--------~~--~~~~~~~~   77 (188)
                      .+++.++.|+|+-||+|||+||        +|.++..-|.+|+.|||+++...-.   +.        .+  .+...++|
T Consensus       150 vdmvla~Eylh~ygivhrdlkp--------dnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgT  221 (1205)
T KOG0606|consen  150 VDMVLAVEYLHSYGIVHRDLKP--------DNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGT  221 (1205)
T ss_pred             chhhHHhHhhccCCeecCCCCC--------CcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCC
Confidence            3557899999999999999999        9999999999999999987653211   10        11  12345789


Q ss_pred             ccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHH
Q psy4332          78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  157 (188)
                      +.|.|||++.-+.|...+|.|++|+++|+.+  -|..||.+..+++++..++.-.....+.    +...+.+.++++..+
T Consensus       222 PeyiaPeVilrqgygkpvdwwamGiIlyeFL--VgcvpffGdtpeelfg~visd~i~wpE~----dea~p~Ea~dli~~L  295 (1205)
T KOG0606|consen  222 PEYIAPEVILRQGYGKPVDWWAMGIILYEFL--VGCVPFFGDTPEELFGQVISDDIEWPEE----DEALPPEAQDLIEQL  295 (1205)
T ss_pred             ccccChhhhhhhccCCCccHHHHHHHHHHHh--eeeeeccCCCHHHHHhhhhhhhcccccc----CcCCCHHHHHHHHHH
Confidence            9999999999888999999999999999999  7789999999999888876533322222    345577999999999


Q ss_pred             hccCCCCCCC-H--HHH--HHHHHhc
Q psy4332         158 WKRSPTERPS-F--TEI--HLFLQRK  178 (188)
Q Consensus       158 l~~dp~~Rps-~--~el--~~~l~~~  178 (188)
                      |+.+|..|.- .  -++  |.+|+.+
T Consensus       296 L~qnp~~Rlgt~ga~evk~h~ff~~L  321 (1205)
T KOG0606|consen  296 LRQNPLCRLGTGGALEVKQHGFFQLL  321 (1205)
T ss_pred             HHhChHhhcccchhhhhhhccceeec
Confidence            9999999983 3  233  5666654

>KOG0576|consensus

Probab=99.75  E-value=1.6e-18  Score=136.36  Aligned_cols=152  Identities=15%  Similarity=0.197  Sum_probs=116.4

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ..-.|++-+.++.|+|+.|-+|||+|.        .||++++.|-+|++|||.+..+.....  ......||+.|||||+
T Consensus       114 iayvcRetl~gl~ylhs~gk~hRdiKG--------anilltd~gDvklaDfgvsaqitati~--KrksfiGtpywmapEv  183 (829)
T KOG0576|consen  114 IAYVCRETLQGLKYLHSQGKIHRDIKG--------ANILLTDEGDVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEV  183 (829)
T ss_pred             HHHHHhhhhccchhhhcCCcccccccc--------cceeecccCceeecccCchhhhhhhhh--hhhcccCCccccchhH
Confidence            344567788899999999999999999        999999999999999999877654332  3356789999999998


Q ss_pred             hh---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          86 VR---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        86 ~~---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      -.   .+.+..++|||+.|+...|+.  .-..|....-+............  ...........++.+.+|++.++..+|
T Consensus       184 aaverkggynqlcdiwa~gitAiel~--eLqpplfdlhpmr~l~LmTkS~~--qpp~lkDk~kws~~fh~fvK~altknp  259 (829)
T KOG0576|consen  184 AAVERKGGYNQLCDIWALGITAIELG--ELQPPLFDLHPMRALFLMTKSGF--QPPTLKDKTKWSEFFHNFVKGALTKNP  259 (829)
T ss_pred             HHHHhcccccccccccccccchhhhh--hcCCcccccchHHHHHHhhccCC--CCCcccCCccchHHHHHHHHHHhcCCC
Confidence            64   346888999999999999987  65667666665554433322111  111111224557889999999999999


Q ss_pred             CCCCCHHHH
Q psy4332         163 TERPSFTEI  171 (188)
Q Consensus       163 ~~Rps~~el  171 (188)
                      ++||+++.+
T Consensus       260 KkRptaekl  268 (829)
T KOG0576|consen  260 KKRPTAEKL  268 (829)
T ss_pred             ccCCChhhh
Confidence            999999886

>KOG1167|consensus

Probab=99.72  E-value=2.6e-18  Score=128.64  Aligned_cols=161  Identities=23%  Similarity=0.289  Sum_probs=107.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCC-----------------C-C----
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMF-----------------S-S----   65 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~-----------------~-~----   65 (188)
                      ...++..|+.++|++||+|||+||        .|++.+.. +.-.|.|||++....                 . .    
T Consensus       137 Yl~~ll~Al~~~h~~GIvHRDiKp--------sNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~  208 (418)
T KOG1167|consen  137 YLRNLLKALAHLHKNGIVHRDIKP--------SNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDV  208 (418)
T ss_pred             HHHHHHHHhhhhhccCccccCCCc--------cccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcc
Confidence            446778899999999999999999        99998865 446899999876210                 0 0    


Q ss_pred             ------------c--------cccccCCCCCCccccchhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHH
Q psy4332          66 ------------D--------YYRVHDNTSLPIRWMAWESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLE  123 (188)
Q Consensus        66 ------------~--------~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~  123 (188)
                                  +        .........||++|.|||++... ..+.+.||||.|++++.++  .+..||... ++.+
T Consensus       209 ~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lsll--s~~~PFf~a~dd~~  286 (418)
T KOG1167|consen  209 HCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLL--SRRYPFFKAKDDAD  286 (418)
T ss_pred             cccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhh--ccccccccCccccc
Confidence                        0        00112245689999999998744 4688999999999999999  567887532 1111


Q ss_pred             HHHHhh------------cccCC----C--C--------------------------CcccCCCCCChHHHHHHHHHHhc
Q psy4332         124 VLENIS------------HLHAD----D--G--------------------------EFIYLPTPQTTKDILDLMNECWK  159 (188)
Q Consensus       124 ~~~~~~------------~~~~~----~--~--------------------------~~~~~~~~~~~~~~~~li~~cl~  159 (188)
                      ...++.            .....    .  .                          .........++..+.+++.+|++
T Consensus       287 al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le  366 (418)
T KOG1167|consen  287 ALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLE  366 (418)
T ss_pred             hHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHcc
Confidence            111110            00000    0  0                          00000011224568899999999


Q ss_pred             cCCCCCCCHHHH--HHHHHhcc
Q psy4332         160 RSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       160 ~dp~~Rps~~el--~~~l~~~~  179 (188)
                      .||.+|.|+++.  |+||.+..
T Consensus       367 ~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  367 LNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             CChhhcccHHHHhcCcCCcchh
Confidence            999999999998  77776543

>KOG1152|consensus

Probab=99.70  E-value=3.8e-18  Score=132.52  Aligned_cols=95  Identities=21%  Similarity=0.340  Sum_probs=80.8

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      -+|++++..+||+.||+|||||-        +||.++.+|.+||.|||.+....++    ......||..|+|||++-+.
T Consensus       676 FkQV~agi~hlh~~~ivhrdikd--------envivd~~g~~klidfgsaa~~ksg----pfd~f~gtv~~aapevl~g~  743 (772)
T KOG1152|consen  676 FKQVVAGIKHLHDQGIVHRDIKD--------ENVIVDSNGFVKLIDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGE  743 (772)
T ss_pred             HHHHHhccccccccCceeccccc--------ccEEEecCCeEEEeeccchhhhcCC----CcceeeeeccccchhhhCCC
Confidence            46788999999999999999999        9999999999999999998766433    23456678889999999888


Q ss_pred             CCC-ChhhHHHHHHHHHHHHhCCCCCCCCC
Q psy4332          90 KFT-TKSDVWSFGVTLWEILNLARHRPYEG  118 (188)
Q Consensus        90 ~~~-~~~di~slG~~~~~l~t~~~~~p~~~  118 (188)
                      ++. ..-|||++|+++|.+.  ....||..
T Consensus       744 ~y~gk~qdiwalgillytiv--ykenpyyn  771 (772)
T KOG1152|consen  744 KYLGKPQDIWALGILLYTIV--YKENPYYN  771 (772)
T ss_pred             ccCCCcchhhhhhheeeEEE--eccCCCcC
Confidence            764 4589999999999998  67778753

>KOG1023|consensus

Probab=99.68  E-value=1.2e-16  Score=124.34  Aligned_cols=162  Identities=25%  Similarity=0.406  Sum_probs=113.5

Q ss_pred             cccchhhhhhhhccccc-ccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGV-EHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i-~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..++++.++.|+|...| .|+.+++        .|++++..+.+|++|||+.................-..-|.|||.+.
T Consensus        53 ~~rdi~~Gl~ylh~s~i~~hg~l~s--------~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr  124 (484)
T KOG1023|consen   53 FIRDISKGLAYLHNSPIGYHGALKS--------SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLR  124 (484)
T ss_pred             HHHHHHHHHHHHhcCcceeeeeecc--------ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhc
Confidence            34678889999997777 9999999        99999999999999999865543211111111222334599999997


Q ss_pred             cC---C----CCChhhHHHHHHHHHHHHhCCCCCCCCCC----CHHHHHHHhhcccCCCCCcccCC-CCCChHHHHHHHH
Q psy4332          88 LR---K----FTTKSDVWSFGVTLWEILNLARHRPYEGL----TDLEVLENISHLHADDGEFIYLP-TPQTTKDILDLMN  155 (188)
Q Consensus        88 ~~---~----~~~~~di~slG~~~~~l~t~~~~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~  155 (188)
                      +.   .    .+.+.|+||+|++++|++  .+.-||...    .+.++..++.... ....++... .....+++..++.
T Consensus       125 ~~~~~~~~~~~~~~gdiYs~~ii~~ei~--~r~~~~~~~~~~~~~~eii~~~~~~~-~~~~rP~i~~~~e~~~~l~~l~~  201 (484)
T KOG1023|consen  125 GALSQSLESALTQKGDIYSFGIIMYEIL--FRSGPFDLRNLVEDPDEIILRVKKGG-SNPFRPSIELLNELPPELLLLVA  201 (484)
T ss_pred             ccccccccccccccCCeehHHHHHHHHH--hccCccccccccCChHHHHHHHHhcC-CCCcCcchhhhhhcchHHHHHHH
Confidence            53   1    366799999999999999  556677652    2334555544311 111222222 2245668999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      .||..+|++||+++++...+..+...
T Consensus       202 ~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  202 RCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             HhcccChhhCccHHHHHhhhhhhccc
Confidence            99999999999999997777766553

>KOG1033|consensus

Probab=99.67  E-value=3.5e-17  Score=125.98  Aligned_cols=139  Identities=22%  Similarity=0.302  Sum_probs=96.5

Q ss_pred             chhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc----cccccCCCCCCccccchhhhh
Q psy4332          12 NLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD----YYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus        12 ~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      +++.++.|   +|.+|+|+||        .||++..+..+||.|||+........    ....+....||..||+||.+.
T Consensus       367 q~~~~~~y---k~~ihrdlkp--------~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~  435 (516)
T KOG1033|consen  367 QIAPAVEY---KGLIHRDLKP--------SNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR  435 (516)
T ss_pred             hhccchhh---ccchhhhccc--------cccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHh
Confidence            44455555   8999999999        99999888899999999876654333    122345667899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|||+||++++|+++.. ...+   ........+......+.     ..... ++-..|++.++.++|.+||+
T Consensus       436 g~~y~~kvdIyaLGlil~EL~~~f-~T~~---er~~t~~d~r~g~ip~~-----~~~d~-p~e~~ll~~lls~~p~~RP~  505 (516)
T KOG1033|consen  436 GQQYSEKVDIYALGLILAELLIQF-STQF---ERIATLTDIRDGIIPPE-----FLQDY-PEEYTLLQQLLSPSPEERPS  505 (516)
T ss_pred             hhhhhhhcchhhHHHHHHHHHHHh-ccHH---HHHHhhhhhhcCCCChH-----HhhcC-cHHHHHHHHhcCCCcccCch
Confidence            999999999999999999999411 1111   11222222322211110     11112 24567999999999999996


Q ss_pred             HHHH
Q psy4332         168 FTEI  171 (188)
Q Consensus       168 ~~el  171 (188)
                      +.+.
T Consensus       506 ~~~~  509 (516)
T KOG1033|consen  506 AIEV  509 (516)
T ss_pred             HHHH
Confidence            6655

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.67  E-value=2.4e-17  Score=121.08  Aligned_cols=131  Identities=16%  Similarity=0.241  Sum_probs=86.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      +..+++....++|+.|++|+|+||        +|++++.+|.+.|+||+.........   ..  ...+..|.+||....
T Consensus       150 lT~Q~I~lvA~Lh~~GlVHgdi~~--------~nfll~~~G~v~Lg~F~~~~r~g~~~---~~--~~~~~~~~PPe~~~~  216 (288)
T PF14531_consen  150 LTVQMIRLVANLHSYGLVHGDIKP--------ENFLLDQDGGVFLGDFSSLVRAGTRY---RC--SEFPVAFTPPELESC  216 (288)
T ss_dssp             HHHHHHHHHHHHHHTTEEEST-SG--------GGEEE-TTS-EEE--GGGEEETTEEE---EG--GGS-TTTS-HHHHHH
T ss_pred             HHHHHHHHHHHHhhcceEecccce--------eeEEEcCCCCEEEcChHHHeecCcee---ec--cCCCcccCChhhhhh
Confidence            345677888999999999999999        99999999999999998655443321   11  233456899998754


Q ss_pred             C--------CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          89 R--------KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        89 ~--------~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .        .++.+.|.|++|+++|.+|  ++..||....+......           ....=...++.+..+|..+|+.
T Consensus       217 ~~~~~~~~~~~t~~~DaW~LG~~ly~lW--C~~lPf~~~~~~~~~~~-----------~f~~C~~~Pe~v~~LI~~lL~~  283 (288)
T PF14531_consen  217 AGQFGQNNAPYTFATDAWQLGITLYSLW--CGRLPFGLSSPEADPEW-----------DFSRCRDMPEPVQFLIRGLLQR  283 (288)
T ss_dssp             HTSCHHSEEEE-HHHHHHHHHHHHHHHH--HSS-STCCCGGGSTSGG-----------GGTTSS---HHHHHHHHHHT-S
T ss_pred             hcccCcccceeeeccCHHHHHHHHHHHH--HccCCCCCCCccccccc-----------cchhcCCcCHHHHHHHHHHccC
Confidence            2        4688999999999999999  77899886543221110           0000025678999999999999


Q ss_pred             CCCCC
Q psy4332         161 SPTER  165 (188)
Q Consensus       161 dp~~R  165 (188)
                      +|++|
T Consensus       284 ~~~~R  288 (288)
T PF14531_consen  284 NPEDR  288 (288)
T ss_dssp             SGGGS
T ss_pred             CcccC
Confidence            99987

>KOG1240|consensus

Probab=99.66  E-value=1.3e-16  Score=131.85  Aligned_cols=153  Identities=18%  Similarity=0.154  Sum_probs=103.2

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCC----CCcccccc-CCCCCCc
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF----SSDYYRVH-DNTSLPI   78 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~----~~~~~~~~-~~~~~~~   78 (188)
                      +++.-++++|+.|+..+|+.||+|+|||.        +|||++.=+.+.|+||...+..-    ++..+.-. .....-.
T Consensus       120 iEKkWiaFQLL~al~qcH~~gVcHGDIKs--------ENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRt  191 (1431)
T KOG1240|consen  120 IEKKWIAFQLLKALSQCHKLGVCHGDIKS--------ENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRT  191 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcccccccc--------ceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCcee
Confidence            34566789999999999999999999999        99999999999999998765432    12111110 1111223


Q ss_pred             cccchhhhhcC----------C-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCC-CC
Q psy4332          79 RWMAWESVRLR----------K-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP-QT  146 (188)
Q Consensus        79 ~~~~Pe~~~~~----------~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  146 (188)
                      +|.|||-+...          . .+++.||||+||+++|+++ .|.++|.-.   ++...-. +.   ......... -.
T Consensus       192 CYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~-Eg~PlF~LS---QL~aYr~-~~---~~~~e~~Le~Ie  263 (1431)
T KOG1240|consen  192 CYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFL-EGRPLFTLS---QLLAYRS-GN---ADDPEQLLEKIE  263 (1431)
T ss_pred             eecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHh-cCCCcccHH---HHHhHhc-cC---ccCHHHHHHhCc
Confidence            69999988641          2 5678999999999999996 566666421   1111000 00   000000000 01


Q ss_pred             hHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         147 TKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       147 ~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      +..+++++..|++.||++|.++++.+
T Consensus       264 d~~~Rnlil~Mi~rdPs~RlSAedyL  289 (1431)
T KOG1240|consen  264 DVSLRNLILSMIQRDPSKRLSAEDYL  289 (1431)
T ss_pred             CccHHHHHHHHHccCchhccCHHHHH
Confidence            23689999999999999999999863

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.64  E-value=5.2e-16  Score=111.11  Aligned_cols=111  Identities=21%  Similarity=0.238  Sum_probs=85.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh-
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV-   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~-   86 (188)
                      .++.+++.++.++|+++++|+|+++        .||+++.++.++++|||.+........ .......++..|++||.. 
T Consensus       102 ~~~~~l~~~l~~lh~~~i~h~di~~--------~ni~v~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~  172 (225)
T smart00221      102 FYLRQILEALEYLHSLGIVHRDLKP--------ENILLGMDGLVKLADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLL  172 (225)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEeeCceeeEecCccc-ccccceeccCCcCCHhHhc
Confidence            3456788899999999999999999        999999999999999998776644320 011233455679999998 


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-CCHH-HHHHHhh
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEG-LTDL-EVLENIS  129 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~-~~~~-~~~~~~~  129 (188)
                      ....++.++|+|++|+++++++  .|..||.. .... ...+.+.
T Consensus       173 ~~~~~~~~~Dv~~lG~~~~~l~--~g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      173 GGKGYGEAVDIWSLGVILYELL--WGPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             CCCCCCchhhHHHHHHHHHHHH--HCCCCccccchhHHHHHHHHh
Confidence            5566778999999999999999  46889977 4433 4444444

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0603|consensus

Probab=99.60  E-value=3.5e-16  Score=122.71  Aligned_cols=139  Identities=24%  Similarity=0.360  Sum_probs=108.3

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcCC
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK   90 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~   90 (188)
                      .+++.++.++|+.||+|+|+|+        +||+++.+|.+++.|||+++......      ..+||.-||+||.+.  .
T Consensus       104 aelaLald~lh~l~iiyrd~k~--------enilld~~Ghi~~tdfglske~v~~~------~~cgt~eymApEI~~--g  167 (612)
T KOG0603|consen  104 AELALALDHLHKLGIAYRDYKL--------ENVLLLLEGHIKLTDFGLSKEAVKEK------IACGTYEYRAPEIIN--G  167 (612)
T ss_pred             HHHHHHHhhcchhHHHHhcccc--------cceeecccCccccCCchhhhHhHhhh------hcccchhhhhhHhhh--c
Confidence            4567889999999999999999        99999999999999999987765432      227788899999987  4


Q ss_pred             CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH--
Q psy4332          91 FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF--  168 (188)
Q Consensus        91 ~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~--  168 (188)
                      ....+|.||+|++.++++  +|..||.+    +....+....       ...+...+....+++..++..+|..|...  
T Consensus       168 h~~a~D~ws~gvl~fell--tg~~pf~~----~~~~~Il~~~-------~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~  234 (612)
T KOG0603|consen  168 HLSAADWWSFGVLAFELL--TGTLPFGG----DTMKRILKAE-------LEMPRELSAEARSLFRQLFKRNPENRLGAGP  234 (612)
T ss_pred             cCCcccchhhhhhHHHHh--hCCCCCch----HHHHHHhhhc-------cCCchhhhHHHHHHHHHHHhhCHHHHhccCc
Confidence            566899999999999999  56789888    3443343211       12224456788999999999999999855  


Q ss_pred             ---HHH--HHHHHhc
Q psy4332         169 ---TEI--HLFLQRK  178 (188)
Q Consensus       169 ---~el--~~~l~~~  178 (188)
                         .|+  |++++.+
T Consensus       235 ~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  235 DGVDEIKQHEFFQSI  249 (612)
T ss_pred             chhHHHhccchheee
Confidence               333  6666655

>KOG4158|consensus

Probab=99.60  E-value=6.6e-15  Score=110.63  Aligned_cols=149  Identities=19%  Similarity=0.213  Sum_probs=103.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc--Ccc--eEEEccCCCCccCCCCc---ccccc-CCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG--KKF--EIKISDFATDSDMFSSD---YYRVH-DNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~--~~~--~~kl~dfg~~~~~~~~~---~~~~~-~~~~~~~~   79 (188)
                      .+..+++.+.-|||++|++|||+|+        +|||+.  +++  ...++|||.+-.....+   ++..+ ....|+..
T Consensus       345 ~~laQlLEav~hL~~hgvAhRDlKS--------DNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~  416 (598)
T KOG4158|consen  345 VILAQLLEAVTHLHKHGVAHRDLKS--------DNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAK  416 (598)
T ss_pred             HHHHHHHHHHHHHHHccchhhcccc--------cceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcce
Confidence            4556788999999999999999999        999874  333  46899999754433222   12222 34557778


Q ss_pred             ccchhhhhcCC-----C-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHH
Q psy4332          80 WMAWESVRLRK-----F-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDL  153 (188)
Q Consensus        80 ~~~Pe~~~~~~-----~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (188)
                      .||||....-.     . -.|+|.|+.|.+.||++  +...||.+.....+..+-    +.+... ..-...++..++++
T Consensus       417 lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIf--g~~NPFY~rGem~L~~r~----Yqe~qL-Palp~~vpp~~rql  489 (598)
T KOG4158|consen  417 LMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIF--GRSNPFYKRGEMLLDTRT----YQESQL-PALPSRVPPVARQL  489 (598)
T ss_pred             ecchhhhhcCCCCceeeccchhhhhhhhhhHHHHh--ccCCcccccchheechhh----hhhhhC-CCCcccCChHHHHH
Confidence            99999986321     1 23899999999999999  778899875433222111    001111 22234567789999


Q ss_pred             HHHHhccCCCCCCCHHHH
Q psy4332         154 MNECWKRSPTERPSFTEI  171 (188)
Q Consensus       154 i~~cl~~dp~~Rps~~el  171 (188)
                      +...|..||++|++..-.
T Consensus       490 V~~lL~r~pskRvsp~iA  507 (598)
T KOG4158|consen  490 VFDLLKRDPSKRVSPNIA  507 (598)
T ss_pred             HHHHhcCCccccCCccHH
Confidence            999999999999986543

>KOG1164|consensus

Probab=99.59  E-value=1.3e-14  Score=109.95  Aligned_cols=159  Identities=13%  Similarity=0.070  Sum_probs=113.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-----ceEEEccCCCCc--cCCCCc-c--ccc---cCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-----FEIKISDFATDS--DMFSSD-Y--YRV---HDNT   74 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-----~~~kl~dfg~~~--~~~~~~-~--~~~---~~~~   74 (188)
                      ++|.+++.++.++|+.|++||||||        .|+.++..     -.+.+.|||+++  ...... .  ...   ....
T Consensus       126 ~ia~q~l~~l~~lH~~G~iHRDiKp--------~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~  197 (322)
T KOG1164|consen  126 RIAIQNLNALEDLHSKGFIHRDIKP--------ENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLF  197 (322)
T ss_pred             HHHHHHHHHHHHHHhcCcccCCcCH--------HHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCC
Confidence            4567888999999999999999999        99998865     358999999998  332221 1  111   1234


Q ss_pred             CCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHH
Q psy4332          75 SLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLM  154 (188)
Q Consensus        75 ~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  154 (188)
                      .||..|+++..-.+...+++.|+||++.++.++.  .+..||.+.........+...........  .....+.++..+.
T Consensus       198 rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~--~g~LPW~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  273 (322)
T KOG1164|consen  198 RGTLRYASINVHLGIEQGRRDDLESLFYMLLELL--KGSLPWEALEMTDLKSKFEKDPRKLLTDR--FGDLKPEEFAKIL  273 (322)
T ss_pred             CCccccccHHHhCCCccCCchhhhhHHHHHHHHh--cCCCCCccccccchHHHHHHHhhhhcccc--ccCCChHHHHHHH
Confidence            4899999999988888999999999999999999  66799977653322222221111000000  1233456788888


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         155 NECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       155 ~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ..+-..+...+|....+...+++.
T Consensus       274 ~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  274 EYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             HHhhccCCcCCCCHHHHHHHHHHH
Confidence            888889999999999987666544

>KOG0195|consensus

Probab=99.59  E-value=7.5e-15  Score=105.46  Aligned_cols=150  Identities=22%  Similarity=0.387  Sum_probs=108.4

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      +-|.+++++..|||+-.  |---        .+++..+.++++.+++|+--..-..++       .....-.+.|++||.
T Consensus       293 ~faldiargmaflhslep~ipr~--------~lns~hvmidedltarismad~kfsfq-------e~gr~y~pawmspea  357 (448)
T KOG0195|consen  293 RFALDIARGMAFLHSLEPMIPRF--------YLNSKHVMIDEDLTARISMADTKFSFQ-------EVGRAYSPAWMSPEA  357 (448)
T ss_pred             HHHHHHHhhHHHHhhcchhhhhh--------hcccceEEecchhhhheecccceeeee-------ccccccCcccCCHHH
Confidence            34667889999999642  2222        344489999999887764322111111       122334567999999


Q ss_pred             hhcCC---CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          86 VRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        86 ~~~~~---~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      +....   .-..+|+|||+++++|+-  ++..||.+..+.+..-++.-    ++.+... ++..+..+..++.-|+..||
T Consensus       358 lqrkped~n~raadmwsfaillwel~--trevpfadlspmecgmkial----eglrv~i-ppgis~hm~klm~icmnedp  430 (448)
T KOG0195|consen  358 LQRKPEDLNIRAADMWSFAILLWELN--TREVPFADLSPMECGMKIAL----EGLRVHI-PPGISRHMNKLMNICMNEDP  430 (448)
T ss_pred             HhcCchhcchhhhhHHHHHHHHHHhh--ccccccccCCchhhhhhhhh----ccccccC-CCCccHHHHHHHHHHhcCCC
Confidence            97443   235799999999999999  78899999998887766542    2233333 36778899999999999999


Q ss_pred             CCCCCHHHHHHHHHhcc
Q psy4332         163 TERPSFTEIHLFLQRKN  179 (188)
Q Consensus       163 ~~Rps~~el~~~l~~~~  179 (188)
                      .+||.+..+++.|+++.
T Consensus       431 gkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  431 GKRPKFDMIVPILEKMI  447 (448)
T ss_pred             CcCCCcceehhhHHHhc
Confidence            99999999999998764

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.57  E-value=4.1e-14  Score=106.01  Aligned_cols=151  Identities=22%  Similarity=0.302  Sum_probs=109.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCcccc----ccCCCCCCccccch
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYR----VHDNTSLPIRWMAW   83 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~P   83 (188)
                      ...+++.++.++|+.+++|||+||        +|++++..+ .++++|||.+..........    ......++..|++|
T Consensus       106 ~~~~~~~~l~~~H~~~~~hrd~kp--------~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~p  177 (384)
T COG0515         106 ILAQILSALEYLHSKGIIHRDIKP--------ENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP  177 (384)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCH--------HHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCH
Confidence            445677778899999999999999        999999988 79999999987554332211    23566688899999


Q ss_pred             hhhhc---CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH----HHHHHHhhcccCCCCCcccCCCC----CChHHHHH
Q psy4332          84 ESVRL---RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD----LEVLENISHLHADDGEFIYLPTP----QTTKDILD  152 (188)
Q Consensus        84 e~~~~---~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  152 (188)
                      |.+.+   .......|+|++|+++++++  .+..||.....    ......+......  ........    .....+.+
T Consensus       178 e~~~~~~~~~~~~~~D~~s~g~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  253 (384)
T COG0515         178 EVLLGLSLAYASSSSDIWSLGITLYELL--TGLPPFEGEKNSSATSQTLKIILELPTP--SLASPLSPSNPELISKAASD  253 (384)
T ss_pred             HHhcCCCCCCCCchHhHHHHHHHHHHHH--hCCCCCCCCCccccHHHHHHHHHhcCCc--ccccccCccccchhhHHHHH
Confidence            99987   56888999999999999988  56677766652    3333333222111  00011111    11257889


Q ss_pred             HHHHHhccCCCCCCCHHHH
Q psy4332         153 LMNECWKRSPTERPSFTEI  171 (188)
Q Consensus       153 li~~cl~~dp~~Rps~~el  171 (188)
                      ++.+++..+|..|.+..+.
T Consensus       254 ~~~~~~~~~~~~r~~~~~~  272 (384)
T COG0515         254 LLKKLLAKDPKNRLSSSSD  272 (384)
T ss_pred             HHHHHHhcCchhcCCHHHH
Confidence            9999999999999988876

>KOG1165|consensus

Probab=99.53  E-value=1.8e-14  Score=105.94  Aligned_cols=159  Identities=16%  Similarity=0.188  Sum_probs=118.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-----eEEEccCCCCccCCCCc-----cccccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-----EIKISDFATDSDMFSSD-----YYRVHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-----~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~   77 (188)
                      ++|.+|+..+.++|++.+|+|||||        +|.||+..+     .+.+.|||+++...++.     +++.+.+..||
T Consensus       128 miA~Qmi~rie~vH~k~LIYRDIKP--------dNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGT  199 (449)
T KOG1165|consen  128 MIAKQMITRIEYVHEKDLIYRDIKP--------DNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGT  199 (449)
T ss_pred             HHHHHHHHHHHHHHhcceeecccCc--------cceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccc
Confidence            5788999999999999999999999        999997543     48999999999876543     45566677899


Q ss_pred             ccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-cCCCCCChHHHHHHHHH
Q psy4332          78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-YLPTPQTTKDILDLMNE  156 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~  156 (188)
                      .+||+...-.+...+...|.=++|-++.+.+  .|..||++.......++......+..... ...-..++.++..-++-
T Consensus       200 ARYMSINTHlGrEQSRRDDLEaLGHvFmYFL--RGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~y  277 (449)
T KOG1165|consen  200 ARYMSINTHLGREQSRRDDLEALGHVFMYFL--RGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRY  277 (449)
T ss_pred             eeeeEeeccccchhhhhhhHHHhhhhhhhhc--cCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHH
Confidence            9999988888888999999999999999999  89999999754333333322111111111 11113467788877777


Q ss_pred             HhccCCCCCCCHHHHHHHHH
Q psy4332         157 CWKRSPTERPSFTEIHLFLQ  176 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~  176 (188)
                      .-..+-.+-|..+-+...|.
T Consensus       278 vR~L~F~E~PDYdylr~Lf~  297 (449)
T KOG1165|consen  278 VRRLDFFETPDYDYLRKLFD  297 (449)
T ss_pred             HHhcCcccCCCHHHHHHHHH
Confidence            77777778888777644433

>KOG1163|consensus

Probab=99.46  E-value=6.2e-14  Score=99.05  Aligned_cols=156  Identities=17%  Similarity=0.163  Sum_probs=113.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCC-----ccccccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSS-----DYYRVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~~~   79 (188)
                      ++|.+++..+.|+|.++++||||||        +|.|.+-+   ..+-++|||+++...+.     .+++......||..
T Consensus       115 MLaDQml~RiEyvH~r~fiHRDIKP--------dNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaR  186 (341)
T KOG1163|consen  115 MLADQMLSRIEYVHLRNFIHRDIKP--------DNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTAR  186 (341)
T ss_pred             HHHHHHHHHHHHHHhhccccccCCc--------cceeeccccccceEEEEeccchhhhccccccccCccccCCccceeee
Confidence            4577888899999999999999999        99998754   56899999999887543     33455566778999


Q ss_pred             ccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHH---HHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL---ENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      |++.....+-..+...|+=|+|.++.++-  .|..||++.......   +++.+...  .......=..+|.++...+.-
T Consensus       187 YASinAh~g~eqSRRDDmeSvgYvLmYfn--rG~LPWQglka~tk~QKyEkI~EkK~--s~~ie~LC~G~P~EF~myl~Y  262 (341)
T KOG1163|consen  187 YASINAHLGIEQSRRDDMESVGYVLMYFN--RGSLPWQGLKAATKKQKYEKISEKKM--STPIEVLCKGFPAEFAMYLNY  262 (341)
T ss_pred             ehhhhhhhhhhhhhhhhhhhhcceeeeee--cCCCcccccchhhHHHHHHHHHHhhc--CCCHHHHhCCCcHHHHHHHHH
Confidence            99888777677788999999999888777  789999998654333   33332111  011111113467888888888


Q ss_pred             HhccCCCCCCCHHHHHHHH
Q psy4332         157 CWKRSPTERPSFTEIHLFL  175 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l  175 (188)
                      |-..--++.|+..-+.+.|
T Consensus       263 ~R~L~F~E~Pdy~ylrqlF  281 (341)
T KOG1163|consen  263 CRGLGFEEKPDYMYLRQLF  281 (341)
T ss_pred             HhhcCCCCCCcHHHHHHHH
Confidence            8888777888766554433

>KOG0590|consensus

Probab=99.33  E-value=2.5e-13  Score=110.01  Aligned_cols=157  Identities=23%  Similarity=0.307  Sum_probs=120.0

Q ss_pred             cccchhhhhhhhc-ccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCC-CccccccCCCCC-Cccccchh
Q psy4332           9 QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFS-SDYYRVHDNTSL-PIRWMAWE   84 (188)
Q Consensus         9 ~~~~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~-~~~~~~~~~~~~-~~~~~~Pe   84 (188)
                      ...++..++.|+| ..++.|+|+||        +|.+++..+ ..+++|||++..... .+.........| ++.|++||
T Consensus       128 ~~~ql~s~l~~~H~~~~~~h~~ikP--------~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E  199 (601)
T KOG0590|consen  128 YLPQLNSGLSYLHPENGVTHRDIKP--------SNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPE  199 (601)
T ss_pred             hhhhhccCccccCcccccccCCCCC--------ccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcc
Confidence            4467788999999 99999999999        999999998 899999999988876 555455556667 89999999


Q ss_pred             hhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      ...+. -.....|+||.|+++..++  .+..||.........  ...+..........+.........+++.+++..+|+
T Consensus       200 ~~~~~~~~~~~~d~~S~g~~l~~~~--~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~  275 (601)
T KOG0590|consen  200 HLSGKAYRGPSVDVWSLGIVLSAML--TGELPWDFPSRKDGR--YSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPS  275 (601)
T ss_pred             cccchhhcCCCcccccccccccccc--cCCCCcccccccccc--ceeecccccccccCccccCChhhhhcccccccCCch
Confidence            99874 4566899999999999999  667777655432211  111111112323555667788999999999999999


Q ss_pred             CCCCHHHH--HHHHHh
Q psy4332         164 ERPSFTEI--HLFLQR  177 (188)
Q Consensus       164 ~Rps~~el--~~~l~~  177 (188)
                      .|.+.+++  ..++..
T Consensus       276 ~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  276 NRLSIEELKLDNWLSS  291 (601)
T ss_pred             hccccccccccccccc
Confidence            99999998  455554

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.19  E-value=7.7e-12  Score=95.65  Aligned_cols=71  Identities=20%  Similarity=0.116  Sum_probs=55.8

Q ss_pred             cccchhhhhhhhcccccccccc-hhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-c-----ccCCCCCCcccc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSL-KKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-R-----VHDNTSLPIRWM   81 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~l-k~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~-----~~~~~~~~~~~~   81 (188)
                      ...+++.++.|+|++||+|||| ||        .||+++.++.++|+|||+++.....+.. .     ......+++.|+
T Consensus       116 ~~~~i~~aL~~lH~~gIiHrDL~KP--------~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~  187 (365)
T PRK09188        116 WFRSAHRALRDLHRAGITHNDLAKP--------QNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTY  187 (365)
T ss_pred             HHHHHHHHHHHHHHCCCeeCCCCCc--------ceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccC
Confidence            4556789999999999999999 99        9999998899999999998876543311 1     112445677789


Q ss_pred             chhhhh
Q psy4332          82 AWESVR   87 (188)
Q Consensus        82 ~Pe~~~   87 (188)
                      +||.+.
T Consensus       188 ~pe~~~  193 (365)
T PRK09188        188 APDALT  193 (365)
T ss_pred             CcccCC
Confidence            999885

>KOG1166|consensus

Probab=99.10  E-value=3.5e-10  Score=94.83  Aligned_cols=94  Identities=16%  Similarity=0.086  Sum_probs=72.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-------CcceEEEccCCCCccCCCCccccccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-------KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~   80 (188)
                      ..+.+|+.-+.++|..+|||+||||        +|.+|.       ....++|+|||-+..+.--...........|-.+
T Consensus       798 ~~~~qml~ive~lH~~~IIHgDiKP--------DNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f  869 (974)
T KOG1166|consen  798 FFSCQMLRIVEHLHAMGIIHGDIKP--------DNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLF  869 (974)
T ss_pred             HHHHHHHHHHHHHHhcceecccCCc--------ceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccc
Confidence            3456778889999999999999999        777763       2334899999987655321111223344556679


Q ss_pred             cchhhhhcCCCCChhhHHHHHHHHHHHHh
Q psy4332          81 MAWESVRLRKFTTKSDVWSFGVTLWEILN  109 (188)
Q Consensus        81 ~~Pe~~~~~~~~~~~di~slG~~~~~l~t  109 (188)
                      -++|...|..|++..|.|+++.+++.|+-
T Consensus       870 ~C~EM~~grpWtYq~DyfGlAa~~h~mLF  898 (974)
T KOG1166|consen  870 DCIEMREGRPWTYQIDYFGLAATVHVMLF  898 (974)
T ss_pred             hhHHHhcCCCCchhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999999984

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.08  E-value=8.9e-11  Score=82.75  Aligned_cols=93  Identities=14%  Similarity=0.103  Sum_probs=65.1

Q ss_pred             ccchhhhhhhhcccccccccc-hhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-----cc------cCCCCCC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSL-KKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-----RV------HDNTSLP   77 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~l-k~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~------~~~~~~~   77 (188)
                      ..+++.++.++|++||+|+|+ ||        .||+++.++.++|+|||++......+..     ..      ......+
T Consensus        97 ~~qi~~~L~~lH~~GIvHrDL~kp--------~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~  168 (218)
T PRK12274         97 FRAARRLLQQLHRCGVAHNDLAKE--------ANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYC  168 (218)
T ss_pred             HHHHHHHHHHHHHCcCccCCCCCc--------ceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence            456677899999999999999 79        9999999999999999998865443310     00      0112234


Q ss_pred             ccccchhhhhcC-CCC-ChhhHHHHHHHHHHHHhC
Q psy4332          78 IRWMAWESVRLR-KFT-TKSDVWSFGVTLWEILNL  110 (188)
Q Consensus        78 ~~~~~Pe~~~~~-~~~-~~~di~slG~~~~~l~t~  110 (188)
                      +.++.|+--.-. ..+ ...+.++.|.-+|.++|+
T Consensus       169 ~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~  203 (218)
T PRK12274        169 PAALTPVERRVLKRTSWIRELWFATGKPVYRFVTR  203 (218)
T ss_pred             CCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhc
Confidence            556666553322 233 345677889999999963

>KOG2137|consensus

Probab=99.01  E-value=9.8e-11  Score=93.70  Aligned_cols=146  Identities=14%  Similarity=0.109  Sum_probs=99.5

Q ss_pred             hhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-------ccCCCCCCccccchhh
Q psy4332          14 AVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-------VHDNTSLPIRWMAWES   85 (188)
Q Consensus        14 ~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~Pe~   85 (188)
                      +.|+.++| +.+++|+++.|        ++|.++..+..|++.|+++.....+..+.       ..........|.+||+
T Consensus       109 ~dgl~flh~sAk~VH~ni~p--------~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~  180 (700)
T KOG2137|consen  109 ADGLAFLHRSAKVVHGNIQP--------EAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEY  180 (700)
T ss_pred             cchhhhhccCcceeecccch--------hheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchh
Confidence            35667777 78999999999        99999999999999999865443322211       1122334567999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+...+..+|+||+|+++|.+..+ |..-+..... ...........  +-.........++++++=+.+++..++..|
T Consensus       181 ~~~~~~~~~sd~fSlG~li~~i~~~-gk~i~~a~~~-~~~~~~~~~~~--~~~~~~~s~~~p~el~~~l~k~l~~~~~~r  256 (700)
T KOG2137|consen  181 LLGTTNTPASDVFSLGVLIYTIYNG-GKSIIAANGG-LLSYSFSRNLL--NAGAFGYSNNLPSELRESLKKLLNGDSAVR  256 (700)
T ss_pred             hccccccccccceeeeeEEEEEecC-CcchhhccCC-cchhhhhhccc--ccccccccccCcHHHHHHHHHHhcCCcccC
Confidence            9887788899999999999988732 2222222211 11111111111  111122236778899999999999999999


Q ss_pred             CCHHHH
Q psy4332         166 PSFTEI  171 (188)
Q Consensus       166 ps~~el  171 (188)
                      |++.++
T Consensus       257 p~~~~l  262 (700)
T KOG2137|consen  257 PTLDLL  262 (700)
T ss_pred             cchhhh
Confidence            988776

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.00  E-value=8.7e-11  Score=84.19  Aligned_cols=76  Identities=14%  Similarity=0.100  Sum_probs=56.0

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      ..+++.++..+|+.|++|+|+||        .|++++.++ ++++|||...........              ..+....
T Consensus       141 ~~~i~~~l~~lH~~gi~H~Dikp--------~Nili~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler  197 (232)
T PRK10359        141 KAKIKASIESLHQHGMVSGDPHK--------GNFIVSKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLER  197 (232)
T ss_pred             HHHHHHHHHHHHHcCCccCCCCh--------HHEEEeCCC-EEEEECCCcccccchhhH--------------HHHHHHh
Confidence            34677889999999999999999        999999888 999999976544221100              1122233


Q ss_pred             CCCChhhHHHHHHHHHHHH
Q psy4332          90 KFTTKSDVWSFGVTLWEIL  108 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~  108 (188)
                      .+..++|+|++|+.+.-+.
T Consensus       198 ~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        198 HYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             HhcccccccceeEeehHHH
Confidence            4557899999999776554

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.90  E-value=1.3e-08  Score=78.08  Aligned_cols=161  Identities=16%  Similarity=0.150  Sum_probs=110.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      +.+++|+.+..-+|..|..-+|+++        +|+++++++.+.|.|-.....- ..+  .......+...|++||.-.
T Consensus       121 rvaRnlA~aFA~lH~~Gh~vGDVn~--------~~~lVsd~~~V~LVdsDsfqi~-~ng--~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         121 RVARNLASAFATLHEHGHVVGDVNQ--------NSFLVSDDSKVVLVDSDSFQIN-ANG--TLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             HHHHHHHHHHHHHHhcCCcccccCc--------cceeeecCceEEEEcccceeec-cCC--ceEecccCccccCCHHHhc
Confidence            3567899999999999999999999        9999999999999886543222 121  2334555677899999865


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-----HHHHHHHhhccc---------CCCCCcccCCCCCChH
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-----DLEVLENISHLH---------ADDGEFIYLPTPQTTK  148 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-----~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~  148 (188)
                           +..-+...|-|.+|+++++++- .|..||.+..     +......|..+.         .........+....+.
T Consensus       190 ~~sf~g~~r~~~hD~FGLavLiF~lL~-ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp  268 (637)
T COG4248         190 LPSFVGFERTANHDNFGLAVLIFHLLF-GGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPP  268 (637)
T ss_pred             cccccccCCCccccchhHHHHHHHHHh-cCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCH
Confidence                 3345667999999999999985 4578987632     111111121111         1111122334455678


Q ss_pred             HHHHHHHHHhcc--CCCCCCCHHHHHHHHHhccC
Q psy4332         149 DILDLMNECWKR--SPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       149 ~~~~li~~cl~~--dp~~Rps~~el~~~l~~~~~  180 (188)
                      ++..+..+|+..  .+.-||+++..+..|..+..
T Consensus       269 ~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         269 DVQALFQQAFTESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence            899999999975  36689999998777665544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.89  E-value=6.2e-10  Score=78.24  Aligned_cols=48  Identities=15%  Similarity=0.049  Sum_probs=42.1

Q ss_pred             Cccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCC
Q psy4332           7 RPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF   63 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~   63 (188)
                      ..++.+++.++.++|+ +||+|+|+||        .||+++ ++.++|+|||++....
T Consensus       120 ~~i~~~l~~~l~~lH~~~givHrDlkP--------~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         120 EELYEQVVEQMRRLYQEAGLVHGDLSE--------YNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCh--------hhEEEE-CCCEEEEEcccceecC
Confidence            3456788899999999 9999999999        999998 7889999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.86  E-value=7.6e-10  Score=77.77  Aligned_cols=45  Identities=13%  Similarity=0.095  Sum_probs=38.5

Q ss_pred             cccchhhhhhhh-cccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332           9 QASNLAVVPLLR-NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus         9 ~~~~~~~~~~~l-h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      ++.+++.++.++ |+.||+|+|+||        .||+++. +.++|+|||++...
T Consensus       122 i~~qi~~~L~~l~H~~giiHrDlkP--------~NIli~~-~~v~LiDFG~a~~~  167 (190)
T cd05147         122 LYLQVIQIMRILYQDCRLVHADLSE--------YNLLYHD-GKLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HHEEEEC-CcEEEEEccccccC
Confidence            456678889998 799999999999        9999984 68999999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0606|consensus

Probab=98.85  E-value=3.2e-09  Score=88.73  Aligned_cols=152  Identities=24%  Similarity=0.256  Sum_probs=114.5

Q ss_pred             hhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCC---------------------------
Q psy4332          13 LAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS---------------------------   65 (188)
Q Consensus        13 ~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~---------------------------   65 (188)
                      +.....+||...+.|+|++|        .+.+...++..++++|++.......                           
T Consensus       913 ~vqs~e~L~s~~r~h~~~~p--------~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l  984 (1205)
T KOG0606|consen  913 RVQSLESLHSSLRKHRDLKP--------DSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQL  984 (1205)
T ss_pred             HHhhhhccccchhhcccccc--------cchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccccc
Confidence            34567899998899999999        9999999999999999732221100                           


Q ss_pred             --ccccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCC
Q psy4332          66 --DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT  143 (188)
Q Consensus        66 --~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (188)
                        ...+......+|+.|.+||...+..-...+|.|+.|+.+++.+  .|..||....+.+..+.+.........    ..
T Consensus       985 ~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l--~g~pp~na~tpq~~f~ni~~~~~~~p~----g~ 1058 (1205)
T KOG0606|consen  985 SADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVL--TGIPPFNAETPQQIFENILNRDIPWPE----GP 1058 (1205)
T ss_pred             ccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhh--cCCCCCCCcchhhhhhccccCCCCCCC----Cc
Confidence              0012234556788999999999888888999999999999999  778999999888888766543222111    12


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHH---HH--HHHHHhc
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFT---EI--HLFLQRK  178 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~---el--~~~l~~~  178 (188)
                      ...+.+..+++.+.+..++.+|..+.   ++  |++++..
T Consensus      1059 ~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1059 EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             cccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence            34567899999999999999999877   44  6666644

>KOG1266|consensus

Probab=98.77  E-value=2.5e-09  Score=79.25  Aligned_cols=147  Identities=19%  Similarity=0.180  Sum_probs=92.2

Q ss_pred             CCccccchhhhhhhhc--ccccccccchhhhhccccccceEEcCcceEEEccCCCCcc--CCCCccccccCCCCCCcccc
Q psy4332           6 HRPQASNLAVVPLLRN--KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD--MFSSDYYRVHDNTSLPIRWM   81 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh--~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~--~~~~~~~~~~~~~~~~~~~~   81 (188)
                      +.+-+.+|+.|+.|||  +..|+|+++..        +.+++..+|.+|+..-.-...  ..............+-++|.
T Consensus       178 wkkw~tqIlsal~yLhs~~PpiihgnlTc--------~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~  249 (458)
T KOG1266|consen  178 WKKWCTQILSALSYLHSCDPPIIHGNLTC--------DTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFS  249 (458)
T ss_pred             HHHHHHHHHhhhhhhhccCCccccCCcch--------hheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccc
Confidence            3455678999999999  57899999999        999999999888765332111  11111111222334556788


Q ss_pred             chhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          82 AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        82 ~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +||.-..-+....+|||+||+...++.-+. ..|-.+....+..+.+.......          ....-++++.+|++.+
T Consensus       250 a~~sg~~tn~~~a~dIy~fgmcAlemailE-iq~tnseS~~~~ee~ia~~i~~l----------en~lqr~~i~kcl~~e  318 (458)
T KOG1266|consen  250 APESGTTTNTTGASDIYKFGMCALEMAILE-IQSTNSESKVEVEENIANVIIGL----------ENGLQRGSITKCLEGE  318 (458)
T ss_pred             cCCcCcccccccchhhhhhhHHHHHHHHhe-eccCCCcceeehhhhhhhheeec----------cCccccCcCcccccCC
Confidence            888865556677899999999999987322 12222222222222221111000          0112346889999999


Q ss_pred             CCCCCCHHHH
Q psy4332         162 PTERPSFTEI  171 (188)
Q Consensus       162 p~~Rps~~el  171 (188)
                      |..||++.++
T Consensus       319 P~~rp~ar~l  328 (458)
T KOG1266|consen  319 PNGRPDARLL  328 (458)
T ss_pred             CCCCcchhhh
Confidence            9999999987

>KOG0601|consensus

Probab=98.65  E-value=3e-08  Score=78.30  Aligned_cols=139  Identities=18%  Similarity=0.195  Sum_probs=95.3

Q ss_pred             hhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCcccccc---CCCCCCccccchhhhhcCCC
Q psy4332          16 VPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVH---DNTSLPIRWMAWESVRLRKF   91 (188)
Q Consensus        16 ~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~Pe~~~~~~~   91 (188)
                      |+.++|.+.|+|-|+||        .|+.+..+ ...++.|||+...+.+.+-....   -...+...|++||... +-+
T Consensus       234 al~~~hs~~~~~~~~kp--------~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~  304 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKP--------ANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLA  304 (524)
T ss_pred             cccccCCCcccccccch--------hheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-ccc
Confidence            89999999999999999        99999988 78899999988777655422211   1224556699999986 557


Q ss_pred             CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH
Q psy4332          92 TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI  171 (188)
Q Consensus        92 ~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el  171 (188)
                      +...|+|++|.++.+...+. ..|-.+..  ..+..+..+.. +.+.    -...+.++...+..|++.++..|++++.+
T Consensus       305 ~~~~di~sl~ev~l~~~l~~-~~~~~g~~--~~W~~~r~~~i-p~e~----~~~~s~~l~~~~~~~~d~~~~~~~~~q~~  376 (524)
T KOG0601|consen  305 TFASDIFSLGEVILEAILGS-HLPSVGKN--SSWSQLRQGYI-PLEF----CEGGSSSLRSVTSQMLDEDPRLRLTAQIL  376 (524)
T ss_pred             chHhhhcchhhhhHhhHhhc-ccccCCCC--CCccccccccC-chhh----hcCcchhhhhHHHHhcCcchhhhhHHHHH
Confidence            88999999999999887432 22222211  11111111110 0011    12234566668999999999999999988

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.65  E-value=1.4e-08  Score=71.83  Aligned_cols=48  Identities=21%  Similarity=0.169  Sum_probs=42.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF   63 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~   63 (188)
                      ..+.+++.++.++|+.||+|+|+||        .||+++.++.++|+|||.+....
T Consensus       129 ~~~~~i~~~l~~lh~~gi~H~Dl~p--------~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         129 EVLDEILEEIVKAYKHGIIHGDLSE--------FNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCCCc--------ccEEEcCCCcEEEEECCccccCC
Confidence            3567788889999999999999999        99999999999999999886554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.63  E-value=1.8e-08  Score=73.33  Aligned_cols=44  Identities=18%  Similarity=0.172  Sum_probs=39.3

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ..+++.++.++|++||+|+|+||        .||+++.++.++|+|||.+..
T Consensus       148 ~~~i~~~l~~lH~~GI~HrDlkp--------~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        148 WQAIGQLIARFHDAGVYHADLNA--------HNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCc--------hhEEEcCCCCEEEEECCCccc
Confidence            34677899999999999999999        999999888999999998654

>smart00090 RIO RIO-like kinase

Probab=98.58  E-value=1.8e-08  Score=73.19  Aligned_cols=46  Identities=20%  Similarity=0.192  Sum_probs=41.0

Q ss_pred             ccccchhhhhhhhcccc-cccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332           8 PQASNLAVVPLLRNKNG-VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~-i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      .++.+++.++.++|++| |+|+|+||        .||+++ ++.++++|||.+...
T Consensus       152 ~i~~qi~~~l~~LH~~g~iiH~Dikp--------~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      152 ELYDDILEEMRKLYKEGELVHGDLSE--------YNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             HHHHHHHHHHHHHHhcCCEEeCCCCh--------hhEEEE-CCCEEEEEChhhhcc
Confidence            56778899999999999 99999999        999998 778999999987654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.49  E-value=4e-08  Score=68.68  Aligned_cols=48  Identities=17%  Similarity=0.154  Sum_probs=41.6

Q ss_pred             Cccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCC
Q psy4332           7 RPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF   63 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~   63 (188)
                      +.++.+++.++.++|+ +||+|+|+||        +||+++ ++.++++|||.+....
T Consensus       117 ~~~~~~~~~~l~~lh~~~~ivH~Dl~p--------~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         117 EELYDQILELMRKLYREAGLVHGDLSE--------YNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             HHHHHHHHHHHHHHhhccCcCcCCCCh--------hhEEEE-CCcEEEEECccccccc
Confidence            4456778888999999 9999999999        999999 8889999999976553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10345 hypothetical protein; Provisional

Probab=98.34  E-value=2e-07  Score=66.42  Aligned_cols=41  Identities=17%  Similarity=0.080  Sum_probs=32.6

Q ss_pred             cchhhhh-hhhcccccccccchhhhhccccccceEEcC----cceEEEccCCCC
Q psy4332          11 SNLAVVP-LLRNKNGVEHSSLKKKCIKIFDFKNCLVGK----KFEIKISDFATD   59 (188)
Q Consensus        11 ~~~~~~~-~~lh~~~i~h~~lk~~~i~~~~~~nill~~----~~~~kl~dfg~~   59 (188)
                      .+++.++ .|+|+++|+|||+||        +||+++.    +..++|+|++.+
T Consensus       111 ~~~L~~l~~yLh~~~IvhrDlKp--------~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        111 RQLLKKLKRYLLDNRIVTMELKP--------QNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHHHHHHHHHCCEeecCCCH--------HHEEEeccCCCCCcEEEEECCCC
Confidence            4455555 899999999999999        9999974    347999995543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.33  E-value=2.2e-07  Score=65.55  Aligned_cols=46  Identities=17%  Similarity=0.196  Sum_probs=40.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      .++.+++.++.++|+.|++|+|++|        .|++++ ++.+++.|||++...
T Consensus        94 ~~~~~i~~~l~~lH~~gi~H~Dl~~--------~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAGIVHGDLTT--------SNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCc--------ceEEEE-CCcEEEEECCCCcCC
Confidence            4577788999999999999999999        999998 788999999987653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.30  E-value=2.8e-07  Score=65.66  Aligned_cols=45  Identities=16%  Similarity=0.176  Sum_probs=40.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      .++.+++.++.++|+.|++|+|++|        .||+++ ++.++++|||.+..
T Consensus        99 ~i~~~i~~~l~~lH~~~i~H~Dl~p--------~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         99 ELSREIGRLVGKLHSAGIIHGDLTT--------SNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCc--------ccEEEE-CCCEEEEECCcccC
Confidence            5667888899999999999999999        999998 67899999998765

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.30  E-value=2.1e-07  Score=75.41  Aligned_cols=46  Identities=17%  Similarity=0.254  Sum_probs=40.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      ..+.+++.++.++|++|++|+|+||        .||++ .++.++++|||+++..
T Consensus       432 ~~~~~i~~~L~~lH~~giiHrDlkp--------~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        432 ELVRKVGEIVAKLHKAGIVHGDLTT--------SNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             HHHHHHHHHHHHHHhCCCccCCCCh--------HHEEE-ECCcEEEEeCcccccC
Confidence            3567888999999999999999999        99999 5678999999997653

>KOG1243|consensus

Probab=98.12  E-value=4.7e-06  Score=67.35  Aligned_cols=89  Identities=16%  Similarity=0.129  Sum_probs=62.4

Q ss_pred             ccchhhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332          10 ASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus        10 ~~~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ..+|+.||.+|| +.+++|+++.-        ..|+++..|..||.+|.++......+.  .......-..|..|+.+..
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~--------~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~  179 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCK--------DSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDP  179 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEee--------eeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCc
Confidence            467889999996 89999999999        999999999999999987655432221  0011111112555555432


Q ss_pred             CCCCChhhHHHHHHHHHHHHhC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNL  110 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~  110 (188)
                      ..  -..|.|.||+++++++.+
T Consensus       180 s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  180 SE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cc--cchhhhhHHHHHHHHhCc
Confidence            11  356999999999999943

>KOG0601|consensus

Probab=98.12  E-value=1.6e-06  Score=68.83  Aligned_cols=142  Identities=17%  Similarity=0.151  Sum_probs=94.7

Q ss_pred             CCccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccc-cch
Q psy4332           6 HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRW-MAW   83 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~-~~P   83 (188)
                      ...+..+++.++.+.|++.++|+|+||        .||++..+ +..++.||+.+..+....    ......+..| .++
T Consensus       368 ~~~~~~q~~~~l~~i~s~~~~~~d~~p--------sni~i~~~~~~~~~~~~~~~t~~~~~~----~~~~~~~r~~p~~~  435 (524)
T KOG0601|consen  368 RLRLTAQILTALNVIHSKLFVHLDVKP--------SNILISNDGFFSKLGDFGCWTRLAFSS----GVFHHIDRLYPIAE  435 (524)
T ss_pred             hhhhHHHHHhccccccchhhhcccccc--------cceeeccchhhhhccccccccccceec----ccccccccccccch
Confidence            456677888999999999999999999        99999886 677999999875432211    1111122223 345


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      ..........+.|+++||.-+.+..++. ..+..+..    +..+..     +  .....+....++..+...+..+++.
T Consensus       436 ~~~e~~~~~~~~~~~sl~~~~~e~~~~~-~ls~~~~~----~~~i~~-----~--~~p~~~~~~~~~q~~~kv~~~~~~~  503 (524)
T KOG0601|consen  436 ILLEDYPHLSKADIFSLGLSVDEAITGS-PLSESGVQ----SLTIRS-----G--DTPNLPGLKLQLQVLLKVMINPDRK  503 (524)
T ss_pred             hhccccccccccccccccccccccccCc-ccCccccc----ceeeec-----c--cccCCCchHHhhhhhhhhhcCCccc
Confidence            5555566778999999999999988532 22222211    111111     1  1111233346788899999999999


Q ss_pred             CCCCHHHH
Q psy4332         164 ERPSFTEI  171 (188)
Q Consensus       164 ~Rps~~el  171 (188)
                      .||.+.++
T Consensus       504 ~~~l~~~l  511 (524)
T KOG0601|consen  504 RRPSAVEL  511 (524)
T ss_pred             cchhhhhh
Confidence            99999888

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.87  E-value=7.4e-06  Score=54.59  Aligned_cols=46  Identities=22%  Similarity=0.114  Sum_probs=38.3

Q ss_pred             ccccchhhhhhhhcc---cccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332           8 PQASNLAVVPLLRNK---NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~---~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ..+.+++.++..+|.   .+++|+|++|        .|++++..+.+++.||+.+..
T Consensus        90 ~~~~~~~~~l~~lh~~~~~~i~H~Dl~~--------~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          90 DIAEQLAELLAKLHQLPLLVLCHGDLHP--------GNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEecCCCc--------ceEEEECCcEEEEEecccccC
Confidence            345566777888887   4799999999        999999988999999998653

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.86  E-value=9e-06  Score=57.22  Aligned_cols=43  Identities=12%  Similarity=0.056  Sum_probs=34.3

Q ss_pred             cchhhhhhhh-cccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332          11 SNLAVVPLLR-NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus        11 ~~~~~~~~~l-h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      .+++.++..+ |+.||+|+|+++        .||++.. +.+.++|||.+...
T Consensus       131 ~~i~~~l~~l~H~~glVHGDLs~--------~NIL~~~-~~v~iIDF~qav~~  174 (197)
T cd05146         131 YQVLSMMKQLYKECNLVHADLSE--------YNMLWHD-GKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCH--------HHEEEEC-CcEEEEECCCceeC
Confidence            3555566656 899999999999        9999974 57999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.70  E-value=2.5e-05  Score=53.53  Aligned_cols=44  Identities=14%  Similarity=0.097  Sum_probs=36.9

Q ss_pred             cccchhhhhhhhccccc-----ccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332           9 QASNLAVVPLLRNKNGV-----EHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i-----~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ...+++.++..+|+.++     +|+|++|        .||+++ ++.+++.||+.+..
T Consensus        88 ~~~~l~~~l~~LH~~~~~~~~~~HgD~~~--------~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          88 NLEKIAKLLKKLHSSPLPDLVPCHNDLLP--------GNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHHHhCCCCCCceeecCCCCc--------CcEEEE-CCeEEEEecccccC
Confidence            34567888999998885     9999999        999998 56799999998643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.60  E-value=4.1e-05  Score=60.64  Aligned_cols=48  Identities=27%  Similarity=0.189  Sum_probs=39.1

Q ss_pred             cccchhh-hhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCC
Q psy4332           9 QASNLAV-VPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFS   64 (188)
Q Consensus         9 ~~~~~~~-~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~   64 (188)
                      ++..++. .+..+|..|++|+|++|        .||+++.++.+++.|||++..+..
T Consensus       261 ia~~~~~~~l~ql~~~g~~H~D~hP--------gNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       261 LAENLARSFLNQVLRDGFFHADLHP--------GNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCc--------ccEEECCCCcEEEEeCCCeeECCH
Confidence            3333433 45677899999999999        999999999999999999877753

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.56  E-value=4.6e-05  Score=52.74  Aligned_cols=42  Identities=19%  Similarity=0.204  Sum_probs=34.7

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      .++=..+.-+|++||+|+|+.+        .|+.++... +-+.|||++..
T Consensus        99 r~vG~~vg~lH~~givHGDLTt--------sNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          99 REVGRLVGKLHKAGIVHGDLTT--------SNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHHHHHhcCeecCCCcc--------ceEEEeCCc-EEEEECCcccc
Confidence            3444567788999999999999        999988775 89999999753

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.42  E-value=6.7e-05  Score=53.42  Aligned_cols=46  Identities=20%  Similarity=0.135  Sum_probs=39.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc---eEEEccCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF---EIKISDFATDSD   61 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~---~~kl~dfg~~~~   61 (188)
                      .+..+++..+.-+|.+||+|+|+++        .|||+..+.   .+.++||+-++.
T Consensus       122 ~ll~~l~~~i~~lH~~gi~H~Dl~~--------~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  122 ELLRALARLIAKLHDAGIYHGDLNP--------SNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHHHHHHHHCcCCCCCCCc--------ccEEEeCCCCceeEEEEcchhcee
Confidence            4556677888999999999999999        999999887   789999996543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.40  E-value=8.2e-05  Score=55.09  Aligned_cols=44  Identities=11%  Similarity=0.147  Sum_probs=36.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcC-------cceEEEccCCCCc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-------KFEIKISDFATDS   60 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-------~~~~kl~dfg~~~   60 (188)
                      +..+++..+.-+|.+||+|+|+++        .||+++.       ...+.++||+.+.
T Consensus       143 ll~~la~~i~~LH~~Gi~HgDL~~--------~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        143 LIKRVATMVRDMHAAGINHRDCYI--------CHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHHCcCccCCCCh--------hhEEEeccccCCCCCceEEEEECCccc
Confidence            344677788899999999999999        9998874       4678999999764

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.39  E-value=8.5e-05  Score=52.04  Aligned_cols=37  Identities=30%  Similarity=0.417  Sum_probs=28.5

Q ss_pred             hhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332          17 PLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus        17 ~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      ...+|+.||+|+|+.+        .||+++.+ .+.++|||.+...
T Consensus       120 ~~~~~~~givHGDLs~--------~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  120 IKMLHKAGIVHGDLSE--------YNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             HHHHHCTTEEESS-ST--------TSEEEETT-CEEE--GTTEEET
T ss_pred             HHHHHhcCceecCCCh--------hhEEeecc-eEEEEecCcceec
Confidence            3446899999999999        99999988 8999999976543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3087|consensus

Probab=97.20  E-value=0.00024  Score=49.32  Aligned_cols=45  Identities=20%  Similarity=0.158  Sum_probs=35.4

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDM   62 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~   62 (188)
                      +..+=..+.-+|.++|+|+||..        .||++..++.   +.+.|||++...
T Consensus       119 ~~~iG~~igklH~ndiiHGDLTT--------SNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  119 ARRIGELIGKLHDNDIIHGDLTT--------SNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             HHHHHHHHHHhhhCCeecccccc--------cceEEecCCCcCceEEEeecchhcc
Confidence            34444567889999999999999        9999876543   589999997554

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.73  E-value=0.00085  Score=54.44  Aligned_cols=38  Identities=16%  Similarity=0.156  Sum_probs=32.9

Q ss_pred             hhcccccccccchhhhhccccccceEEcCcc----eEEEccCCCCccCCC
Q psy4332          19 LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----EIKISDFATDSDMFS   64 (188)
Q Consensus        19 ~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----~~kl~dfg~~~~~~~   64 (188)
                      .+...|++|+|+||        .||+++.++    .+++.|||.......
T Consensus       275 Qif~~GffHaDpHP--------GNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        275 QVFRDGFFHADMHP--------GNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHhCCeeeCCCCh--------HHeEEecCCCCCCeEEEEecceEEECCH
Confidence            34579999999999        999999887    899999999877754

>KOG3741|consensus

Probab=96.71  E-value=0.016  Score=46.61  Aligned_cols=121  Identities=17%  Similarity=0.180  Sum_probs=83.1

Q ss_pred             ccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcC
Q psy4332          10 ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR   89 (188)
Q Consensus        10 ~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~   89 (188)
                      ..||..|+.++|+.|++=+-+.+        .+|++..+.+++|+..|.........              .  +-+.+ 
T Consensus       399 ~~QLtaaL~sIHssGLAck~L~~--------~kIlv~G~~RIriS~C~i~Dvl~~d~--------------~--~~le~-  453 (655)
T KOG3741|consen  399 ISQLTAALYSIHSSGLACKTLDL--------KKILVTGKMRIRISGCGIMDVLQEDP--------------T--EPLES-  453 (655)
T ss_pred             HHHHHHHHHHHHhcCceeecccH--------hHeEeeCcceEEEecccceeeecCCC--------------C--cchhH-
Confidence            46788999999999999888888        99999999899999888755543321              0  11111 


Q ss_pred             CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHH-HHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          90 KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV-LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        90 ~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                        -.+-|.--+|.+++.+.|++ ...+......+. ..++.              ...+.++++++.-....++++ -++
T Consensus       454 --~Qq~D~~~lG~ll~aLAt~~-~ns~~~d~~~~s~~~~I~--------------~~yS~D~rn~v~yl~s~~~~~-ksI  515 (655)
T KOG3741|consen  454 --QQQNDLRDLGLLLLALATGT-ENSNRTDSTQSSHLTRIT--------------TTYSTDLRNVVEYLESLNFRE-KSI  515 (655)
T ss_pred             --HhhhhHHHHHHHHHHHhhcc-cccccccchHHHHHHHhh--------------hhhhHHHHHHHHHHHhcCccc-ccH
Confidence              12457778999999999753 344444333333 22221              445678888888888877776 677


Q ss_pred             HHHHH
Q psy4332         169 TEIHL  173 (188)
Q Consensus       169 ~el~~  173 (188)
                      +++.+
T Consensus       516 ~~llp  520 (655)
T KOG3741|consen  516 QDLLP  520 (655)
T ss_pred             HHHHH
Confidence            77754

>PRK09902 hypothetical protein; Provisional

Probab=96.37  E-value=0.001  Score=47.29  Aligned_cols=47  Identities=9%  Similarity=0.020  Sum_probs=38.7

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce--EEEccCCCCcc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE--IKISDFATDSD   61 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~--~kl~dfg~~~~   61 (188)
                      ..+..+++.++.-+|+.|+.|+|+-+        .||+++..+.  ++++||.-++.
T Consensus       131 ~~il~~va~~ia~LH~~Gv~Hgdly~--------khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        131 QAMLKAVALAFKKMHSVNRQHGCCYV--------RHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCCH--------hheeecCCCCeeEEEEEhhccch
Confidence            35556778889999999999999999        9999975556  89999986543

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.33  E-value=0.0022  Score=45.93  Aligned_cols=40  Identities=23%  Similarity=0.206  Sum_probs=34.3

Q ss_pred             cchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCC
Q psy4332          11 SNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD   59 (188)
Q Consensus        11 ~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~   59 (188)
                      ..++..+.-+|+.|+.|+|..|        .|++++.++ +++.||+-.
T Consensus       142 ~ki~~~ikqlH~~G~~HGD~hp--------gNFlv~~~~-i~iID~~~k  181 (229)
T PF06176_consen  142 EKIVEAIKQLHKHGFYHGDPHP--------GNFLVSNNG-IRIIDTQGK  181 (229)
T ss_pred             HHHHHHHHHHHHcCCccCCCCc--------CcEEEECCc-EEEEECccc
Confidence            4567788999999999999999        999998664 899999854

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.09  E-value=0.0041  Score=45.87  Aligned_cols=34  Identities=24%  Similarity=0.386  Sum_probs=29.8

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      -..||+|+|+++        .||+++.+|.+.+.||--+...
T Consensus       219 ~~~GiVHGDlSe--------fNIlV~~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         219 YRRGIVHGDLSE--------FNILVTEDGDIVVIDWPQAVPI  252 (304)
T ss_pred             HHcCccccCCch--------heEEEecCCCEEEEeCcccccC
Confidence            379999999999        9999999999999999865433

>KOG1035|consensus

Probab=95.23  E-value=0.036  Score=48.66  Aligned_cols=140  Identities=20%  Similarity=0.243  Sum_probs=82.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhcccccc---ceEEcCcceEEEc--cCCCCccCCCCccccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFK---NCLVGKKFEIKIS--DFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~---nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      ..+.++..++.++|+....|.-+.-        .   +...+..+...++  ||+.++...+.....   ....+..+.+
T Consensus       290 ~~~~~~~~GL~~~h~~~l~~v~L~~--------s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~  358 (1351)
T KOG1035|consen  290 ILHQKLLEGLAYLHSLSLEHVVLSA--------SSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNA  358 (1351)
T ss_pred             HHHHHHhhhHHHHHHhccceeEEec--------ccccccccCccceeecchhhhcccccCCCcccch---hhcCcccccc
Confidence            3456677889999988655555544        3   2223344455555  888776665443211   2222334667


Q ss_pred             hhhhhcCCC--CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          83 WESVRLRKF--TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        83 Pe~~~~~~~--~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      +|.......  +...|+|.+|.+...+..+. ..+-.........                 .........+...+|+..
T Consensus       359 ~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~-~i~~~~~~~~~~l-----------------~~~~~~~~~d~~~~~~~~  420 (1351)
T KOG1035|consen  359 DEDLKENTAKKSRLTDLWCLGLLLLQLSQGE-DISEKSAVPVSLL-----------------DVLSTSELLDALPKCLDE  420 (1351)
T ss_pred             ccccccccchhhhhhHHHHHHHHHhhhhhcC-cccccccchhhhh-----------------ccccchhhhhhhhhhcch
Confidence            777665444  34479999999999887321 1111111111100                 111222677889999999


Q ss_pred             CCCCCCCHHHH--HHHHH
Q psy4332         161 SPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~  176 (188)
                      ++++|+++.++  ++++.
T Consensus       421 ~~~~Rl~~~~ll~~~f~~  438 (1351)
T KOG1035|consen  421 DSEERLSALELLTHPFLR  438 (1351)
T ss_pred             hhhhccchhhhhhchhcc
Confidence            99999999999  55544

>PHA03111 Ser/Thr kinase; Provisional

Probab=94.47  E-value=0.013  Score=44.72  Aligned_cols=42  Identities=21%  Similarity=0.256  Sum_probs=29.9

Q ss_pred             ccccccccchhhhhccccccc----------eEEcCcceEEEccCCCCccCC
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKN----------CLVGKKFEIKISDFATDSDMF   63 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~n----------ill~~~~~~kl~dfg~~~~~~   63 (188)
                      -...+|-|+||+||+.+|++.          +.+.+.-.++|.||.+|+...
T Consensus       301 c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~  352 (444)
T PHA03111        301 CDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVAN  352 (444)
T ss_pred             cceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHcc
Confidence            467999999998888777652          223444557888998876543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.21  E-value=0.036  Score=39.38  Aligned_cols=31  Identities=16%  Similarity=0.290  Sum_probs=26.9

Q ss_pred             ccccccccchhhhhccccccceEEcC--cceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGK--KFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~--~~~~kl~dfg~~~   60 (188)
                      ...++|+|+.+        .||+++.  ++.+.+.||+.+.
T Consensus       173 ~~~l~HgD~~~--------~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRL--------GNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCc--------ccEEEcCCCCcEEEEEeccccc
Confidence            57899999999        9999988  5668999999754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=94.12  E-value=0.046  Score=39.98  Aligned_cols=33  Identities=27%  Similarity=0.310  Sum_probs=28.4

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      ...+++|+||+.        .|||+. ++.+.++|++-+...
T Consensus       184 ~~a~LVHgDLSE--------yNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         184 KEAGLVHGDLSE--------YNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             HhcCcccccchh--------hheEEE-CCeEEEEECcccccc
Confidence            459999999999        999999 678999999976544

>PRK05231 homoserine kinase; Provisional

Probab=94.09  E-value=0.042  Score=41.71  Aligned_cols=32  Identities=25%  Similarity=0.258  Sum_probs=26.6

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ..+++|+|+.+        .||+++.+...-+.||+.+..
T Consensus       186 p~~liHgD~~~--------~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        186 PRGVIHADLFR--------DNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             CcccCCCCCCC--------CcEEEECCceEEEEecccccC
Confidence            45899999999        999998776568999997643

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=93.83  E-value=0.031  Score=42.83  Aligned_cols=42  Identities=24%  Similarity=0.243  Sum_probs=30.6

Q ss_pred             ccccccccchhhhhccccccc----------eEEcCcceEEEccCCCCccCC
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKN----------CLVGKKFEIKISDFATDSDMF   63 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~n----------ill~~~~~~kl~dfg~~~~~~   63 (188)
                      -...+|-||||+||+.+|+.+          ..+.+.-.+++.||.+|+...
T Consensus       297 c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~  348 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVAN  348 (434)
T ss_pred             cceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhcc
Confidence            467999999998888877653          223444558899999876554

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=92.95  E-value=0.087  Score=39.87  Aligned_cols=31  Identities=26%  Similarity=0.250  Sum_probs=27.2

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .|++++.++...+.||+.+.
T Consensus       186 ~~~l~HgD~~~--------~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFP--------DNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCc--------CcEEEECCceEEEeeccccc
Confidence            47999999999        99999988767899999753

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=92.82  E-value=0.09  Score=38.11  Aligned_cols=31  Identities=23%  Similarity=0.075  Sum_probs=26.1

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .|++++.....-|.||+.+.
T Consensus       163 ~~~l~HGD~~~--------~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAP--------GNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCC--------CcEEEECCCEEEEEeCcccC
Confidence            56699999999        99999877666799999753

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.50  E-value=0.092  Score=37.49  Aligned_cols=31  Identities=29%  Similarity=0.255  Sum_probs=21.9

Q ss_pred             cccccccccchhhhhccccccceEEc-CcceEEEccCCCC
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATD   59 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~   59 (188)
                      ....++|+|+.+        .||+++ .++.+-+.||+.+
T Consensus       164 ~~~~~~HgD~~~--------~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  164 LPPVLIHGDLHP--------GNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             SCEEEE-SS-SG--------GGEEEESSTTEEEE--GTT-
T ss_pred             CCcEEEEecccc--------ccceeeeccceeEEEecccc
Confidence            468899999999        999999 5666689999864

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=92.39  E-value=0.1  Score=39.15  Aligned_cols=30  Identities=27%  Similarity=0.283  Sum_probs=26.4

Q ss_pred             cccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      .+++|+|+.|        .|++++.++.+.|.||+.+.
T Consensus       175 ~~l~HgD~~~--------~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFR--------DNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCc--------ccEEEeCCceEEEeehhhhc
Confidence            6799999999        99999988777899998754

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=92.19  E-value=0.094  Score=39.50  Aligned_cols=31  Identities=23%  Similarity=0.217  Sum_probs=26.4

Q ss_pred             ccccccccchhhhhccccccceEEcCc----ceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKK----FEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~----~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .||+++.+    +.+.+.||..+.
T Consensus       178 ~~~lcH~Dl~~--------~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQE--------GNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCc--------CeEEecCCCCCCCcEEEEeeCCCC
Confidence            45789999999        99999874    789999999753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=92.04  E-value=0.1  Score=37.63  Aligned_cols=31  Identities=19%  Similarity=0.201  Sum_probs=26.4

Q ss_pred             ccccccccchhhhhccccccceEEcC-cceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .||+++. ++.+.+.||..+.
T Consensus       169 ~~~l~H~Dl~~--------~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         169 PIVFCHNDLLS--------GNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             CEEEEcCCCCc--------CcEEEeCCCCCEEEEEcccCC
Confidence            45799999999        9999997 5679999998753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=90.93  E-value=0.16  Score=36.09  Aligned_cols=31  Identities=29%  Similarity=0.326  Sum_probs=21.5

Q ss_pred             ccccccccchhhhhccccccceEE-cCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLV-GKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill-~~~~~~kl~dfg~~~   60 (188)
                      ...++|.|+.+        .||++ +.++.++++||..+.
T Consensus       142 ~~v~cHnDl~~--------~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  142 PLVFCHNDLNP--------GNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             GEEEE-S--SG--------GGEEETSSSSCEEE--GTT-E
T ss_pred             CceEeeccCcc--------ccEEeccCCCeEEEecHHHHh
Confidence            36789999999        99999 778899999998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=90.80  E-value=0.14  Score=38.88  Aligned_cols=32  Identities=16%  Similarity=0.090  Sum_probs=27.7

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ..+++|+|+.+        +|++++.++.+.+.||..+..
T Consensus       195 ~~~lcHgD~~~--------~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSL--------SHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcH--------HhEEEcCCCCEEEEEhhhccc
Confidence            45899999999        999999888889999987543

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=90.70  E-value=0.19  Score=36.50  Aligned_cols=30  Identities=17%  Similarity=-0.030  Sum_probs=26.3

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCC
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD   59 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~   59 (188)
                      ...++|+|+.|        .|++++.+....|.||+.+
T Consensus       162 ~~~l~HgD~~~--------~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         162 DLVVTHGDACL--------PNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             ceEEECCCCCC--------ccEEEeCCcEEEEEEcccc
Confidence            46799999999        9999998877889999865

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=90.68  E-value=0.18  Score=38.08  Aligned_cols=30  Identities=23%  Similarity=0.282  Sum_probs=25.2

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .|++++. +.+.+.||+.+.
T Consensus       186 ~~~liHgD~~~--------~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAY--------HNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCc--------ccEEEeC-CcEEEEECcccc
Confidence            47899999999        9999987 567899998643

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=90.41  E-value=0.2  Score=35.35  Aligned_cols=33  Identities=18%  Similarity=0.215  Sum_probs=26.0

Q ss_pred             cccccccccchhhhhccccccceEEcCcc-----eEEEccCCCCcc
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKF-----EIKISDFATDSD   61 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~-----~~kl~dfg~~~~   61 (188)
                      +.+.++|+|+.+        .|+++..++     .+.+.||..+..
T Consensus       118 ~~~vl~HgD~~~--------~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      118 EFNVLNHGDLWA--------NNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             CceEEeeCCCCc--------cceeeccCCCCCccceEEEecccCCc
Confidence            357899999999        999887543     588999997643

subfamily of choline kinases

>KOG1093|consensus

Probab=90.22  E-value=0.092  Score=42.61  Aligned_cols=78  Identities=32%  Similarity=0.417  Sum_probs=44.3

Q ss_pred             CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc-----CCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          92 TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-----LPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        92 ~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+|+|||++|.++.++.  -|..-+......+....+............     ...-..+..+..+..+|+-..|..||
T Consensus       109 ~pKsdVwsl~~i~~el~--L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~  186 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELY--LGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRP  186 (725)
T ss_pred             CcchhhhhHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCcccccccc
Confidence            35999999999999987  344444443333333333221111111000     00012345577888899999999888


Q ss_pred             CHHHH
Q psy4332         167 SFTEI  171 (188)
Q Consensus       167 s~~el  171 (188)
                      ...++
T Consensus       187 l~~~~  191 (725)
T KOG1093|consen  187 LPMEL  191 (725)
T ss_pred             chhHH
Confidence            66655

>PRK10271 thiK thiamine kinase; Provisional

Probab=90.21  E-value=0.23  Score=34.80  Aligned_cols=30  Identities=13%  Similarity=0.153  Sum_probs=25.1

Q ss_pred             cccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ...+|+|+.|        .|+++++++ ++++||+.+..
T Consensus        77 ~~p~H~D~~~--------~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         77 LAPLHMDVHA--------GNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeeecCCCCC--------ccEEEECCC-EEEEeCCcccC
Confidence            4568999999        999998877 88999998643

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=90.10  E-value=0.21  Score=38.36  Aligned_cols=28  Identities=21%  Similarity=0.348  Sum_probs=24.8

Q ss_pred             cccccchhhhhccccccceEEcCcce-EEEccCCCCc
Q psy4332          25 VEHSSLKKKCIKIFDFKNCLVGKKFE-IKISDFATDS   60 (188)
Q Consensus        25 i~h~~lk~~~i~~~~~~nill~~~~~-~kl~dfg~~~   60 (188)
                      +||+|+.|        +||+++.+.. +.+.||+-+.
T Consensus       199 iIH~D~~~--------~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHP--------DNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCc--------cceeEcCCCCeeeEEEccccc
Confidence            99999999        9999998874 8999999653

>TIGR02721 ycfN_thiK thiamine kinase

Probab=90.01  E-value=0.2  Score=36.74  Aligned_cols=30  Identities=23%  Similarity=0.224  Sum_probs=25.4

Q ss_pred             cccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ..++|+|+.|        .|++++.++ +.+.||..+..
T Consensus       146 ~~l~H~Dl~~--------~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       146 LAPLHMDVHA--------YNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             CeeecCCCCc--------CcEEEeCCC-CEEEeccccCc
Confidence            4689999999        999998876 78999987643

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=89.88  E-value=0.098  Score=36.73  Aligned_cols=47  Identities=13%  Similarity=-0.045  Sum_probs=37.5

Q ss_pred             CCccccchhhhhhhhcc---cccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332           6 HRPQASNLAVVPLLRNK---NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus         6 ~~~~~~~~~~~~~~lh~---~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      +..+|.+++..+.+++.   ..+.-+|+++        +|+.++.++.+|+.|.....
T Consensus        61 R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~--------~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   61 RAKIALQLLELLEELDHGPLGFFYLCDVSP--------DNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcEEEeecch--------HHeEEeCCCcEEEEechhcc
Confidence            34567777777777764   5588899999        99999999999999998543

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=89.82  E-value=0.23  Score=40.44  Aligned_cols=36  Identities=22%  Similarity=0.227  Sum_probs=32.3

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCC
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFS   64 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~   64 (188)
                      -..|+.|.|..|        .|++++.+|.+.+.|||.......
T Consensus       282 ~~dgffHaDpHp--------GNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         282 LRDGFFHADPHP--------GNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HhcCccccCCCc--------cceEEecCCcEEEEcCcceecCCH
Confidence            358999999999        999999999999999999877654

>KOG2268|consensus

Probab=89.79  E-value=0.18  Score=38.79  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=30.9

Q ss_pred             hhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCC
Q psy4332          15 VVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD   59 (188)
Q Consensus        15 ~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~   59 (188)
                      ..+--|-.+|+||+|..-        -||++.+++.++++||--.
T Consensus       213 ~~Iv~la~~GlIHgDFNE--------FNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  213 GLIVRLANHGLIHGDFNE--------FNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             HHHHHHHHcCceecccch--------heeEEecCCCEEEeechHh
Confidence            334445689999999999        9999999999999999743

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=89.42  E-value=0.25  Score=35.72  Aligned_cols=30  Identities=13%  Similarity=0.041  Sum_probs=25.5

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ...++|+|+.|        .|++++..+ +.+.||+.+.
T Consensus       152 ~~~~~HgD~~~--------~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       152 TSTCLHGDFQI--------GNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCceEecCCCC--------CcEEEcCCC-cEEEechhcC
Confidence            45678999999        999999887 9999998754

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1826|consensus

Probab=88.81  E-value=0.17  Score=46.47  Aligned_cols=76  Identities=16%  Similarity=0.077  Sum_probs=56.1

Q ss_pred             cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcCCCCChhhHHHHHH
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGV  102 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~  102 (188)
                      +--+|.++|+        .|.++..+..+++.++|+.+.- .+ ...-.+...+++-|+.++..+.-+++.++|+|..|+
T Consensus      1359 ~T~v~~~Lkf--------~lpmIVtny~v~~gk~gLdKIk-np-~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1359 NTNVSKSLKF--------TLPMIVTNYNVKLGKGGLDKIK-NP-VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSL 1428 (2724)
T ss_pred             ccchhhhhhh--------hccceecCCccccccccccccc-Cc-hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            3456788888        8888888888999999997722 11 112334455667788888877667777899999999


Q ss_pred             HHHHHH
Q psy4332         103 TLWEIL  108 (188)
Q Consensus       103 ~~~~l~  108 (188)
                      .+|...
T Consensus      1429 ~ly~rs 1434 (2724)
T KOG1826|consen 1429 SLYLRS 1434 (2724)
T ss_pred             HHHHHh
Confidence            888776

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=88.43  E-value=0.34  Score=36.12  Aligned_cols=31  Identities=19%  Similarity=0.079  Sum_probs=27.2

Q ss_pred             cccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      .-++|.|+.+        .|++.++.+.+.|.||..+..
T Consensus       153 ~v~cH~Dl~~--------~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         153 LVPCHNDLNP--------GNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             eeeecCCCCc--------cceEEcCCCcEEEEecccCCC
Confidence            3689999999        999999988999999987643

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=86.45  E-value=0.59  Score=35.70  Aligned_cols=34  Identities=9%  Similarity=0.064  Sum_probs=29.3

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      +...++|+|.++        .|++++..+.+-+.||+++..-
T Consensus       196 ~~~~lvHGD~~~--------gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         196 GPPVLVHGDYRP--------GNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CCceeeeCCccc--------CCEEEeCCCeeEEEeccccccC
Confidence            467899999999        9999999888999999986543

>PRK06148 hypothetical protein; Provisional

Probab=86.32  E-value=0.53  Score=41.78  Aligned_cols=32  Identities=25%  Similarity=0.268  Sum_probs=26.0

Q ss_pred             ccccccccchhhhhccccccceEEcCcc--eE-EEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKF--EI-KISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~--~~-kl~dfg~~~~   61 (188)
                      ..++||.|+.+        +||+++.++  .+ -|.|||-+..
T Consensus       202 p~~vIHgDln~--------~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        202 PAQVIHNDAND--------YNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             CcceECCCCCc--------ccEEEcCCCCcceEEEEECccccc
Confidence            36799999999        999998775  44 5999997654

>PLN02236 choline kinase

Probab=85.86  E-value=0.51  Score=36.46  Aligned_cols=31  Identities=26%  Similarity=0.374  Sum_probs=26.0

Q ss_pred             ccccccccchhhhhccccccceEEcC-cceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~   60 (188)
                      ...++|+|+++        .||+++. ++.+.+.||..+.
T Consensus       199 ~~~~cH~Dl~~--------~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQY--------GNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCc--------CcEEEeCCCCcEEEEeehhcc
Confidence            45789999999        9999976 4679999998764

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=85.79  E-value=0.57  Score=35.02  Aligned_cols=32  Identities=13%  Similarity=0.206  Sum_probs=25.7

Q ss_pred             ccccccccchhhhhccccccceEEcCcce-EEEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFE-IKISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~-~kl~dfg~~~~   61 (188)
                      ...++|+|+++        .|++++.++. .-|.||+.+..
T Consensus       184 ~~~lvHGD~~~--------~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         184 HTVLVHGDLHP--------GHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CCeeEeCCCCC--------CcEEEeCCCCEEEEECcHhccc
Confidence            45799999999        9999987444 57999997543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=85.61  E-value=0.76  Score=35.98  Aligned_cols=62  Identities=16%  Similarity=0.098  Sum_probs=40.2

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcCCCCChhhHHHH
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF  100 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~sl  100 (188)
                      +=..-||++.-        +||+++ .|.+.|+||-+++.- .++......      .+-.|-++. +.-....+||-+
T Consensus       340 kf~fehrnlt~--------~niLId-~GnvtLIDfklsRl~-~~q~~isy~------rldhp~lF~-G~dd~QFeIYrl  401 (488)
T COG5072         340 KFPFEHRNLTL--------DNILID-EGNVTLIDFKLSRLS-YSQGIISYN------RLDHPDLFN-GVDDYQFEIYRL  401 (488)
T ss_pred             cCCcccccccc--------cceeee-cCceEEEEeeeeecc-cCCceeecc------ccCchhhhc-CccceeeeHHHH
Confidence            34567899998        999999 889999999998733 222111111      123455555 444777888864

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=83.42  E-value=0.66  Score=34.75  Aligned_cols=31  Identities=19%  Similarity=0.174  Sum_probs=24.7

Q ss_pred             ccccccccchhhhhccccccceEEcCc--c---eEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKK--F---EIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~--~---~~kl~dfg~~~   60 (188)
                      -+-++|+|++.        .|+++..+  |   .+++.||..++
T Consensus       214 ~~vl~HGD~w~--------nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  214 FNVLCHGDFWT--------NNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             ceEEEcCccCH--------HhEeEccccccccccceeecccccc
Confidence            46799999999        99998654  2   58999998754

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>KOG1235|consensus

Probab=80.66  E-value=1.3  Score=36.28  Aligned_cols=36  Identities=25%  Similarity=0.198  Sum_probs=29.9

Q ss_pred             ccccccccchhhhhccccccceEEcC----cceEEEccCCCCccCCCC
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGK----KFEIKISDFATDSDMFSS   65 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~----~~~~kl~dfg~~~~~~~~   65 (188)
                      ..|++|+|-.|        .||++..    ++.+.+.|||+.......
T Consensus       319 ~~GffHaDPHP--------GNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  319 KTGFFHADPHP--------GNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             hcCCccCCCCC--------CcEEEecCCCCCccEEEEcccccccccHH
Confidence            57899999999        9999983    577999999997766543

>PRK11768 serine/threonine protein kinase; Provisional

Probab=80.08  E-value=0.94  Score=34.70  Aligned_cols=29  Identities=14%  Similarity=0.020  Sum_probs=23.7

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .||+++ + .+.+.||+.+.
T Consensus       195 ~~~liHgD~h~--------~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        195 RLLRLHGDCHP--------GNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             CccceecCCCc--------hhcccc-C-CcEEEeCCCCC
Confidence            46799999999        999985 3 47889999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	188
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-28
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-28
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-28
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-28
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-28
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-28
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		4e-27
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		4e-27
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		4e-27
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-27
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-26
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-26
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		4e-26
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		4e-26
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		4e-26
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-26
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		4e-26
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-26
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		5e-26
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-26
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		9e-26
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-24
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-24
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-24
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-23
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-23
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		8e-23
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		8e-23
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		9e-23
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		9e-23
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-22
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-22
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-22
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-22
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-22
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-22
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-22
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-22
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-21
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		5e-21
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		5e-21
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		5e-21
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-21
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-21
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-21
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-21
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-21
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-21
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-21
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-21
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-21
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-21
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		7e-21
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		7e-21
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		7e-21
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		8e-21
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-21
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		8e-21
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		8e-21
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		8e-21
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		8e-21
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-20
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-20
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-20
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-20
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-20
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-20
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		2e-20
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-20
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-20
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-20
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		3e-20
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-20
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-20
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-20
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-20
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-20
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-20
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-20
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-20
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		6e-20
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-20
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-20
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-20
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-19
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-19
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-19
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-19
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-19
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-19
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-19
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-19
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-19
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-19
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-19
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-19
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-19
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-19
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-19
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-19
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-19
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-19
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-19
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-19
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		8e-19
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-18
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-18
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-18
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-18
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-18
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-18
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-18
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-18
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-18
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-18
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-18
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-18
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-18
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-18
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-18
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-18
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-18
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-18
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-18
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-18
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-18
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-18
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-18
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-18
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-18
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-18
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-18
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-18
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-18
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-18
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-18
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-18
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-18
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-18
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-18
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-18
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-18
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-18
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-18
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-18
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-17
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-17
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-17
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-17
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-17
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-17
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-17
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-17
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-17
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-17
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-17
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-17
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-17
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-17
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-17
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-17
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-17
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-17
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-17
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-17
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-17
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-17
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-17
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-17
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-17
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		6e-17
4fl2_A	636	Structural And Biophysical Characterization Of The		7e-17
4fl3_A	635	Structural And Biophysical Characterization Of The		7e-17
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		7e-17
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		8e-17
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		9e-17
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-16
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		1e-16
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-16
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-16
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-16
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-16
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-16
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-16
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-16
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-16
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-16
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-16
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-16
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-16
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-16
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		1e-16
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-16
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		1e-16
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-16
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-16
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		2e-16
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		2e-16
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-16
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-16
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		3e-16
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-16
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-16
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-16
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-16
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		4e-16
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-16
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-16
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		6e-16
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		6e-16
2pl0_A	289	Lck Bound To Imatinib Length = 289		6e-16
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		6e-16
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		7e-16
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		8e-16
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		8e-16
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		8e-16
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		9e-16
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		9e-16
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-15
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-15
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-15
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-15
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-15
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-15
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-15
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-15
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-15
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-15
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-15
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		2e-15
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-15
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-15
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-15
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-15
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-15
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-15
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		2e-15
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		2e-15
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-15
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-15
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-15
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-15
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-15
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		3e-15
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-15
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-15
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		3e-15
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		3e-15
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-15
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-15
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-15
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		3e-15
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-15
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-15
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-15
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-15
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-15
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-15
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-15
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		3e-15
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-15
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-15
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-15
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		3e-15
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-15
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-15
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		3e-15
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-15
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-15
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-15
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		4e-15
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-15
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		4e-15
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-15
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-15
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-15
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		6e-15
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		7e-15
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		7e-15
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		8e-15
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		8e-15
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-14
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-14
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-14
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-14
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		5e-14
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-14
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-12
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-12
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-12
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		6e-12
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-12
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-11
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		6e-11
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		6e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-11
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		9e-11
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-10
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-10
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-10
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-10
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-10
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-10
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-10
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-10
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-10
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-10
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-10
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-10
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-10
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		6e-10
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		7e-10
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		9e-10
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-09
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		4e-09
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		4e-08
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		4e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-07
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-06
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		8e-06
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-05
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-05
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		1e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-05
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-05
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		4e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		4e-05
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		5e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-05
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		7e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		8e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		8e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		8e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		8e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		8e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		9e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-05
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		9e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		9e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		9e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		9e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-04
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		3e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		8e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		8e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		9e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		9e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		9e-04

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 87/145 (60%), Gaps = 9/145 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG    +KI DF    D++S+DYYRV  +T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ EV+E I+      G  +  P     K++ D+M  CW+R
Sbjct: 222 GVILWEIFTYGK-QPWFQLSNTEVIECITQ-----GRVLERPRV-CPKEVYDVMLGCWQR 274
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPP 185
            P +R +  EI+  L    LG   P
Sbjct: 275 EPQQRLNIKEIYKILH--ALGKATP 297

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ E ++ I+      G  +  P      ++  +M  CW+R
Sbjct: 247 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPRA-CPPEVYAIMRGCWQR 299
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
            P +R S  ++H  LQ   L   PP+
Sbjct: 300 EPQQRHSIKDVHARLQ--ALAQAPPV 323

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+ + S +K   +    +NCLVG+   +KI+DF    +++S+DYY+   N ++PIRWM  
Sbjct: 186 GMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+   ++TT+SDVW++GV LWEI +    +PY G+   EV+      +  DG  +  P 
Sbjct: 246 ESIFYNRYTTESDVWAYGVVLWEIFSYGL-QPYYGMAHEEVI-----YYVRDGNILACPE 299
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
                ++ +LM  CW + P +RPSF  IH  LQR
Sbjct: 300 -NCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 11/147 (7%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV  +T LPIRWM  ES+  RKFTT+SDVWS 
Sbjct: 157 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 216
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWK 159
           GV LWEI    + +P+  L++ EV+E I+           L  P+T  +++ +LM  CW+
Sbjct: 217 GVVLWEIFTYGK-QPWYQLSNNEVIECITQGRV-------LQRPRTCPQEVYELMLGCWQ 268
Query: 160 RSPTERPSFTEIHLFLQRKNLGYVPPM 186
           R P  R +   IH  LQ  NL    P+
Sbjct: 269 REPHMRKNIKGIHTLLQ--NLAKASPV 293

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score =  120 bits (301), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 223
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ E ++ I+      G  +  P      ++  +M  CW+R
Sbjct: 224 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPRA-CPPEVYAIMRGCWQR 276
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
            P +R S  ++H  LQ   L   PP+
Sbjct: 277 EPQQRHSIKDVHARLQ--ALAQAPPV 300

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score =  120 bits (301), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKFTT+SDVWSF
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 217
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI    + +P+  L++ E ++ I+      G  +  P      ++  +M  CW+R
Sbjct: 218 GVVLWEIFTYGK-QPWYQLSNTEAIDCITQ-----GRELERPRA-CPPEVYAIMRGCWQR 270
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPM 186
            P +R S  ++H  LQ   L   PP+
Sbjct: 271 EPQQRHSIKDVHARLQ--ALAQAPPV 294

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score =  117 bits (293), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D++ +DYYR      LP+RWMA
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 251
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 252 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 281

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score =  117 bits (293), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D++ +DYYR      LP+RWMA
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 253
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 254 QPDNCPERVTDLMRMCWQFNPNMRPTFLEI 283

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score =  117 bits (292), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D++ +DYYR      LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D++ +DYYR      LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score =  114 bits (285), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D++ + YYR      LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 220 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 272 YNPKMRPSFLEI 283

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 157 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 216
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 217 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 268
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 269 YNPKMRPSFLEI 280

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 189 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 249 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 300
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 301 YNPKMRPSFLEI 312

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 220 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 272 YNPKMRPSFLEI 283

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 154 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 214 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 265
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 266 YNPKMRPSFLEI 277

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 221 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 273 YNPKMRPSFLEI 284

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score =  114 bits (284), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 158 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 217
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 218 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 269
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 270 YNPKMRPSFLEI 281

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score =  114 bits (284), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 227 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 279 YNPKMRPSFLEI 290

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score =  113 bits (283), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 227 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 279 YNPKMRPSFLEI 290

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score =  112 bits (281), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 154 RNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D +L+LM  CW+
Sbjct: 214 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLLELMRMCWQ 265
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 266 YNPKMRPSFLEI 277

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D+  +D  R      LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D+  +D  R      LP+RWMA
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 249
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 250 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 279

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           +G+ + + KK   +    +NC+V   F +KI DF    D+  +D  R      LP+RWMA
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES++   FTT SD+WSFGV LWEI +LA  +PY+GL++ +VL+ +     D G   YL 
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLKFV----MDGG---YLD 252
Query: 143 TPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
            P    + + DLM  CW+ +P  RP+F EI
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D+  +D  R      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 152 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 211
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D +L+LM  CW+
Sbjct: 212 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLLELMRMCWQ 263
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 264 YNPKMRPSFLEI 275

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NC+V + F +KI DF    D+  +D  R      LP+RWM+ ES++   FTT SDVWSF
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV LWEI  LA  +PY+GL++ +VL  +        E   L  P    D+L +LM  CW+
Sbjct: 221 GVVLWEIATLA-EQPYQGLSNEQVLRFVM-------EGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 160 RSPTERPSFTEI 171
            +P  RPSF EI
Sbjct: 273 YNPKMRPSFLEI 284

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ S      K    +N LV  K  +KISD     +++++DYY++  N+ LPIRWMA 
Sbjct: 157 GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++   KF+  SD+WS+GV LWE+ +    +PY G ++ +V+E I +          LP 
Sbjct: 217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRNRQV-------LPC 268
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIH 172
           P      +  LM ECW   P+ RP F +IH
Sbjct: 269 PDDCPAWVYALMIECWNEFPSRRPRFKDIH 298

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ S      K    +N LV  K  +KISD     +++++DYY++  N+ LPIRWMA 
Sbjct: 140 GMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 199
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++   KF+  SD+WS+GV LWE+ +    +PY G ++ +V+E I +          LP 
Sbjct: 200 EAIMYGKFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRNRQV-------LPC 251
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIH 172
           P      +  LM ECW   P+ RP F +IH
Sbjct: 252 PDDCPAWVYALMIECWNEFPSRRPRFKDIH 281

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 147 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 205
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 206 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 264
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 265 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 306

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 126 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 185 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 243
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 244 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 285

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 146 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 204
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 205 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 263
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 264 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 305

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 127 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 186 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 244
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 245 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 286

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 187 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 187 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 125 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 183
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 184 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 242
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 243 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 284

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 120 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 178
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 179 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 237
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 238 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 279

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 123 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +YY VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 240
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 241 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 282

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ S +    +    +NC++ +   + ++DF     ++S DYYR    + LP++W+A 
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+    +T  SDVW+FGVT+WEI+   +  PY G+ + E+     + +   G  +  P 
Sbjct: 209 ESLADNLYTVHSDVWAFGVTMWEIMTRGQ-TPYAGIENAEI-----YNYLIGGNRLKQP- 261
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
           P+  +++ DLM +CW   P +RPSFT + + L+
Sbjct: 262 PECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV--HDNTSL 76
           L+   G+E+ + +K   +    +NC++ + F +K++DF    D+   +YY V  H +  L
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL 190
Query: 77  PIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           P++W A ES++  +FTTKSDVWSFGV LWE+L      PY  +       +++H  A   
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGA-PPYRHIDPF----DLTHFLAQGR 245
Query: 137 EFIYLPTPQTTKDIL-DLMNECWKRSPTERPSF 168
               LP P+   D L  +M +CW+  P  RP+F
Sbjct: 246 R---LPQPEYCPDSLYQVMQQCWEADPAVRPTF 275

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 9/155 (5%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ S +    +    +NC++     + ++DF     ++S DYYR      +P++W+A 
Sbjct: 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+  R +T+KSDVW+FGVT+WEI       PY G+ + E+ + + H H        L  
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRG-MTPYPGVQNHEMYDYLLHGHR-------LKQ 270
Query: 144 PQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
           P+   D L ++M  CW+  P +RP+F+ + L L++
Sbjct: 271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++ S K+   +    +N LVG+ +  KI+DF         + Y       LP+RWMA 
Sbjct: 151 GMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 207
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+    +TT SDVWS+GV LWEI++L    PY G+T  E+ E +   +        L  
Sbjct: 208 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEK 259
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
           P    D + DLM +CW+  P ERPSF +I + L R
Sbjct: 260 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 294

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++ S K+   +    +N LVG+ +  KI+DF         + Y       LP+RWMA 
Sbjct: 144 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 200
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+    +TT SDVWS+GV LWEI++L    PY G+T  E+ E +   +        L  
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEK 252
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
           P    D + DLM +CW+  P ERPSF +I + L R
Sbjct: 253 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 287

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++ S K+   +    +N LVG+ +  KI+DF         + Y       LP+RWMA 
Sbjct: 154 GMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAI 210
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           ES+    +TT SDVWS+GV LWEI++L    PY G+T  E+ E +   +        L  
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEK 262
Query: 144 PQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQR 177
           P    D + DLM +CW+  P ERPSF +I + L R
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 386 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 444
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 445 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 493
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 494 CWQWNPSDRPSFAEIH 509

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 347 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 406 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 454
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 455 CWQWNPSDRPSFAEIH 470

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 144 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 203 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 251
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 252 CWQWNPSDRPSFAEIH 267

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 153 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 211
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 212 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 260
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 261 CWQWNPSDRPSFAEIH 276

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 142 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 201 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 249
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 140 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 199 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 247
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 248 CWQWNPSDRPSFAEIH 263

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 96.7 bits (239), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 142 RNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 201 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 249
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 96.3 bits (238), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G+++ + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 127 HNPTVKDLIGFGLQVAK-GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 185
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           +   VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 186 EXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 244
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 245 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 286

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 187 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 304
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 305 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 346

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 133 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 191
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 192 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 250
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 251 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 292

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 187 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 128 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 186
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 187 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 245
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 246 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 287

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 129 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 187
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 188 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 246
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 247 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 288

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM+  
Sbjct: 126 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 184
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 185 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 243
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 244 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 285

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 6   HRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS 65
           H P   +L    L   K G++  + KK   +    +NC++ +KF +K++DF    DM   
Sbjct: 129 HNPTVKDLIGFGLQVAK-GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK 187
Query: 66  DYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
           ++  VH+ T   LP++WMA ES++ +KFTTKSDVWSFGV LWE++      PY  +   +
Sbjct: 188 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFD 246
Query: 124 V----LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +    L+    L  +     Y P P     + ++M +CW      RPSF+E+
Sbjct: 247 ITVYLLQGRRLLQPE-----YCPDP-----LYEVMLKCWHPKAEMRPSFSEL 288

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 168 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 226
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 227 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 279
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 280 DPSRRPRFTEL 290

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 203
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 204 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 256
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 257 DPSRRPRFTEL 267

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 143 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 201
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 202 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 254
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 255 DPSRRPRFTEL 265

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 142 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 200
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 201 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 253
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 254 DPSRRPRFTEL 264

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 140 RNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D +  H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 138 RNCLVGENHLVKVADFGL-SRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 101 GVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
           GV LWEI       PY G+      E+LE    +   +G           + + +LM  C
Sbjct: 197 GVLLWEIATYGM-SPYPGIDPSQVYELLEKDYRMERPEG---------CPEKVYELMRAC 246
Query: 158 WKRSPTERPSFTEIH 172
           W+ +P++RPSF EIH
Sbjct: 247 WQWNPSDRPSFAEIH 261

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 137 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 196 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 248
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 249 DPSRRPRFTEL 259

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 520 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 578
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 579 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 631
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 632 DPSRRPRFTEL 642

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 520 RNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMF 578
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 579 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 631
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 632 DPSRRPRFTEL 642

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D    H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 145 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 204 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 252
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 253 CWQWNPSDRPSFAEIH 268

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+    F+ KSDVW+F
Sbjct: 159 RNCLVGENHVVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    ++LE    +   +G             + +LM  
Sbjct: 218 GVLLWEIATYGM-SPYPGI-DLSQVYDLLEKGYRMEQPEG---------CPPKVYELMRA 266
Query: 157 CWKRSPTERPSFTEIH 172
           CWK SP +RPSF E H
Sbjct: 267 CWKWSPADRPSFAETH 282

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D    H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 141 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 200 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 248
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 249 CWQWNPSDRPSFAEIH 264

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D    H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 138 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 101 GVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
           GV LWEI       PY G+      E+LE    +   +G           + + +LM  C
Sbjct: 197 GVLLWEIATYGM-SPYPGIDPSQVYELLEKDYRMERPEG---------CPEKVYELMRAC 246
Query: 158 WKRSPTERPSFTEIH 172
           W+ +P++RPSF EIH
Sbjct: 247 WQWNPSDRPSFAEIH 261

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 92.8 bits (229), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D    H     PI+W A ES+   KF+ KSDVW+F
Sbjct: 138 RNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 101 GVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
           GV LWEI       PY G+      E+LE    +   +G           + + +LM  C
Sbjct: 197 GVLLWEIATYGM-SPYPGIDPSQVYELLEKDYRMERPEG---------CPEKVYELMRAC 246
Query: 158 WKRSPTERPSFTEIH 172
           W+ +P++RPSF EIH
Sbjct: 247 WQWNPSDRPSFAEIH 261

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y        PI+W A ES+   KF+ KSDVW+F
Sbjct: 141 RNCLVGENHLVKVADFGL-SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 200 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 248
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 249 CWQWNPSDRPSFAEIH 264

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30  LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L++ C+   D   +NCLVG+   IK+SDF   +     D Y     T  P++W + E   
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 197
Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             ++++KSDVWSFGV +WE+ +  +  PYE  ++ EV+E+IS      G  +Y P   +T
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 251
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
             +  +MN CWK  P +RP+F+ +
Sbjct: 252 H-VYQIMNHCWKERPEDRPAFSRL 274

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +K++DF   S + + D Y        PI+W A ES+   KF+ KSDVW+F
Sbjct: 142 RNCLVGENHLVKVADFGL-SRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 101 GVTLWEILNLARHRPYEGLTDL----EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           GV LWEI       PY G+ DL    E+LE    +   +G           + + +LM  
Sbjct: 201 GVLLWEIATYGM-SPYPGI-DLSQVYELLEKDYRMERPEG---------CPEKVYELMRA 249
Query: 157 CWKRSPTERPSFTEIH 172
           CW+ +P++RPSF EIH
Sbjct: 250 CWQWNPSDRPSFAEIH 265

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 203 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D        
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 315
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEI 171
              T ++  +M +CW   P++RP+F ++
Sbjct: 316 SNCTNELYMMMRDCWHAVPSQRPTFKQL 343

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30  LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L++ C+   D   +NCLVG+   IK+SDF   +     D Y     T  P++W + E   
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 177
Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             ++++KSDVWSFGV +WE+ +  +  PYE  ++ EV+E+IS      G  +Y P   +T
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 231
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
             +  +MN CWK  P +RP+F+ +
Sbjct: 232 H-VYQIMNHCWKERPEDRPAFSRL 254

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30  LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L++ C+   D   +NCLVG+   IK+SDF   +     D Y     T  P++W + E   
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             ++++KSDVWSFGV +WE+ +  +  PYE  ++ EV+E+IS      G  +Y P   +T
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 229
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
             +  +MN CWK  P +RP+F+ +
Sbjct: 230 H-VYQIMNHCWKERPEDRPAFSRL 252

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 154 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 213
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D        
Sbjct: 214 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 266
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 267 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 300

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 221
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D      P+
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 275
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 276 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 221
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D        
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 274
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 275 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 151 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 210
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D        
Sbjct: 211 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 263
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 264 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 297

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 221
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D        
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMD------KP 274
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 275 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 147 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D      P+
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 260
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 261 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   DYY+   N  LP++WMA 
Sbjct: 155 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 214
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D      P+
Sbjct: 215 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 268
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 269 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 301

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   IK+SDF   +     D Y     T  P++W + E     ++++KSDVWSF
Sbjct: 132 RNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WE+ +  +  PYE  ++ EV+E+IS      G  +Y P   +T  +  +MN CWK 
Sbjct: 191 GVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLASTH-VYQIMNHCWKE 243
Query: 161 SPTERPSFTEI 171
            P +RP+F+ +
Sbjct: 244 RPEDRPAFSRL 254

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30  LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L++ C+   D   +NCLVG+   IK+SDF   +     D Y     T  P++W + E   
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 178
Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             ++++KSDVWSFGV +WE+ +  +  PYE  ++ EV+E+IS      G  +Y P   +T
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 232
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
             +  +MN CW+  P +RP+F+ +
Sbjct: 233 H-VYQIMNHCWRERPEDRPAFSRL 255

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 10/144 (6%)
Query: 30  LKKKCIKIFDF--KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L++ C+   D   +NCLVG+   IK+SDF   +     D Y     T  P++W + E   
Sbjct: 122 LEEACVIHRDLAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFS 180
Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             ++++KSDVWSFGV +WE+ +  +  PYE  ++ EV+E+IS      G  +Y P   +T
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDIS-----TGFRLYKPRLAST 234
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
             +  +MN CW+  P +RP+F+ +
Sbjct: 235 H-VYQIMNHCWRERPEDRPAFSRL 257

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 156 GMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 215
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 216 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 268
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 269 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 215 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 275 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMDK------P 327
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 328 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 158 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 217
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 218 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 270
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 271 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 304

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 161 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 220
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 221 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 273
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 274 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 307

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 90.1 bits (222), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   ++I+DF    D+ + DYY+   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 393 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 452 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 504
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 505 PEERPTFEYLQAFLE 519

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 141 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 200 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 252
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 253 PEERPTFEYLQAFLE 267

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 177 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 236
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWS+G+ LWEI +L  + PY G+    ++ +  +    DG  +  P     K+I
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 290
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             +M  CW   PT RP+F +I  FLQ +
Sbjct: 291 YSIMQACWALEPTHRPTFQQICSFLQEQ 318

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 261
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 262 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 17/177 (9%)
Query: 7   RPQASNLAVVPLLR----NKNGVEHSSLKKKCIKIFDF--KNCLVGKKFEIKISDFATDS 60
           R + + L V  LL+       G+E+  L+ KC    D   +NCLV +K  +KISDF    
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEY--LESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 61  DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT 120
           +     Y        +P++W A E++   +++++SDVWSFG+ LWE  +L    PY  L+
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS-PYPNLS 320
Query: 121 DLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQ 176
           + +  E +       G    LP P+   D +  LM +CW   P +RPSF+ I+  LQ
Sbjct: 321 NQQTREFVE----KGGR---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 189 GMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 247
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 248 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 135 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 194 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 246
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 247 PEERPTFEYLQAFLE 261

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 137 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 196 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 248
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 249 PEERPTFEYLQAFLE 263

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 133 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 191
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 192 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 244
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 245 PEERPTFEYLQAFLE 259

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 185 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 244
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWS+G+ LWEI +L  + PY G+    ++ +  +    DG  +  P     K+I
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 298
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             +M  CW   PT RP+F +I  FLQ +
Sbjct: 299 YSIMQACWALEPTHRPTFQQICSFLQEQ 326

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 261
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 262 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 246
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 247 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 120 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 179
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 180 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 238
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 239 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 287

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 261
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 262 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 246
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 247 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 145 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 204
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 205 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 263
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 264 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 312

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 421
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 422 PEERPTFEYLQAFLE 436

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 155 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 214
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 215 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 273
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 274 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 322

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 169 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 287
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 288 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 421
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 422 PEERPTFEYLQAFLE 436

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 146 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 205
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 206 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 264
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 265 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 313

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 421
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 422 PEERPTFEYLQAFLE 436

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWS+G+ LWEI +L  + PY G+    ++ +  +    DG  +  P     K+I
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 296
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             +M  CW   PT RP+F +I  FLQ +
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +   +KI DF    D++ +  Y    +T LP++WMA ES+  + 
Sbjct: 218 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKI 277
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKD 149
           ++TKSDVWS+GV LWEI +L    PY G+   E  +  S L     E + +  P+ +T +
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLG-GSPYPGVQMDE--DFCSRLR----EGMRMRAPEYSTPE 330
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           I  +M +CW R P ERP F E+
Sbjct: 331 IYQIMLDCWHRDPKERPRFAEL 352

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 247
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 248 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 135 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 194
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 195 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 253
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 254 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 302

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWS+G+ LWEI +L  + PY G+    ++ +  +    DG  +  P     K+I
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 296
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             +M  CW   PT RP+F +I  FLQ +
Sbjct: 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 171 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 230
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWS+G+ LWEI +L  + PY G+    ++ +  +    DG  +  P     K+I
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 284
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             +M  CW   PT RP+F +I  FLQ +
Sbjct: 285 YSIMQACWALEPTHRPTFQQICSFLQEQ 312

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 5   RHRP-QASNLAVVPLLRNKN----GVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDF 56
           R RP Q S+LA++ LL        G ++        +    +NCL+   G     KI DF
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 57  ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPY 116
               D++ + YYR      LP++WM  E+     FT+K+D WSFGV LWEI +L  + PY
Sbjct: 189 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG-YMPY 247
Query: 117 EGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              ++ EVLE ++     D      P       +  +M +CW+  P +RP+F  I
Sbjct: 248 PSKSNQEVLEFVTSGGRMD------PPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 179 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 238
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
           +T +SDVWS+G+ LWEI +L  + PY G+    ++ +  +    DG  +  P     K+I
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLN-PYPGI----LVNSKFYKLVKDGYQMAQPA-FAPKNI 292
Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQRK 178
             +M  CW   PT RP+F +I  FLQ +
Sbjct: 293 YSIMQACWALEPTHRPTFQQICSFLQEQ 320

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G+++ +  K   +    +N LV +  ++KISDF    D++  D Y       +P++WMA
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMA 220
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES+    +TT+SDVWSFGV LWEI+ L  + PY G+   E L N+       G  +  P
Sbjct: 221 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPP-ERLFNL----LKTGHRMERP 274
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
               ++++  LM +CWK+ P +RP F +I   L++
Sbjct: 275 D-NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     M  S   +      LPI+WMA ES+  R+FT+ SDVW F
Sbjct: 140 RNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKWMAPESINFRRFTSASDVWMF 198
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV +WEIL +   +P++G+ + +V+  I     ++GE + +P P     +  LM +CW  
Sbjct: 199 GVCMWEIL-MHGVKPFQGVKNNDVIGRI-----ENGERLPMP-PNCPPTLYSLMTKCWAY 251
Query: 161 SPTERPSFTEI 171
            P+ RP FTE+
Sbjct: 252 DPSRRPRFTEL 262

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF     +   + Y        PI+W A E+    +FT KSDVWSFG
Sbjct: 311 NILVGENLVCKVADFGL-GRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 369
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 370 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 422
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 423 PEERPTFEYLQAFLE 437

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   + +        PI+W A E+    +FT KSDVWSFG
Sbjct: 141 NILVGENLVCKVADFGL-ARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 200 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 252
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 253 PEERPTFEYLQAFLE 267

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   +          PI+W A E+    +FT KSDVWSFG
Sbjct: 134 NILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 192
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 193 ILLTELTTKGRV-PYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKE 245
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 246 PEERPTFEYLQAFLE 260

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + KK   +    +N LV +   +KI+DF    D+   D  +   N  LP++WMA 
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAP 221
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV LWEI  L    PY G+   E+ + +   H  D      P+
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHRMDK-----PS 275
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 276 -NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF   + +   +          PI+W A E+    +FT KSDVWSFG
Sbjct: 144 NILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L E+    R  PY G+ + EVL+ +     + G  +  P P+  + + DLM +CW++ 
Sbjct: 203 ILLTELTTKGR-VPYPGMVNREVLDQV-----ERGYRMPCP-PECPESLHDLMCQCWRKD 255
Query: 162 PTERPSFTEIHLFLQ 176
           P ERP+F  +  FL+
Sbjct: 256 PEERPTFEYLQAFLE 270

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     +   DYY+    T LPI+WM+ ES+  R+FTT SDVW F
Sbjct: 154 RNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMF 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
            V +WEIL+  + +P+  L + +V   I  L   D     LP P     +L  LM  CW 
Sbjct: 213 AVCMWEILSFGK-QPFFWLENKDV---IGVLEKGD----RLPKPDLCPPVLYTLMTRCWD 264
Query: 160 RSPTERPSFTEI 171
             P++RP FTE+
Sbjct: 265 YDPSDRPRFTEL 276

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 7   RPQASNLAVVPLLR----NKNGVEHSSLKKKCIKIFDF--KNCLVGKKFEIKISDFATDS 60
           R + + L V  LL+       G+E+  L+ KC    D   +NCLV +K  +KISDF    
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEY--LESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
Query: 61  DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT 120
           +              +P++W A E++   +++++SDVWSFG+ LWE  +L    PY  L+
Sbjct: 262 EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS-PYPNLS 320
Query: 121 DLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQ 176
           + +  E +       G    LP P+   D +  LM +CW   P +RPSF+ I+  LQ
Sbjct: 321 NQQTREFVE----KGGR---LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     +   DYY+    T LPI+WM+ ES+  R+FTT SDVW F
Sbjct: 138 RNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMF 196
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
            V +WEIL+  + +P+  L + +V   I  L   D     LP P     +L  LM  CW 
Sbjct: 197 AVCMWEILSFGK-QPFFWLENKDV---IGVLEKGDR----LPKPDLCPPVLYTLMTRCWD 248
Query: 160 RSPTERPSFTEI 171
             P++RP FTE+
Sbjct: 249 YDPSDRPRFTEL 260

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +K+ DF     +   DYY+    T LPI+WM+ ES+  R+FTT SDVW F
Sbjct: 142 RNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASDVWMF 200
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
            V +WEIL+  + +P+  L + +V   I  L   D     LP P     +L  LM  CW 
Sbjct: 201 AVCMWEILSFGK-QPFFWLENKDV---IGVLEKGD----RLPKPDLCPPVLYTLMTRCWD 252
Query: 160 RSPTERPSFTEI 171
             P++RP FTE+
Sbjct: 253 YDPSDRPRFTEL 264

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 263
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 316
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 317 MYQTMLDCWHGEPSQRPTFSEL 338

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E  + +K   +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA 
Sbjct: 156 GMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAP 215
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLP 142
           E++  R +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P
Sbjct: 216 ETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFXRRLK-----EGTRMRAP 269
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI 171
              TT ++   M +CW   P++RP+F+E+
Sbjct: 270 D-YTTPEMYQTMLDCWHGEPSQRPTFSEL 297

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E  + +K   +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA 
Sbjct: 156 GMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 215
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLP 142
           E++  R +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P
Sbjct: 216 ETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAP 269
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI 171
              TT ++   M +CW   P++RP+F+E+
Sbjct: 270 D-YTTPEMYQTMLDCWHGEPSQRPTFSEL 297

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG     KI+DF   + +   +          PI+W A E+    +FT KSDVWSFG
Sbjct: 135 NILVGNGLICKIADFGL-ARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 193
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L E++   R  PY G+ + EVLE +   +        +P PQ     L +LM  CWK+
Sbjct: 194 ILLTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPISLHELMIHCWKK 245
Query: 161 SPTERPSFTEIHLFLQ 176
            P ERP+F  +  FL+
Sbjct: 246 DPEERPTFEYLQSFLE 261

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G+++ +  K   +    +N LV +  ++KISDF    D++  D         +P++WMA
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            ES+    +TT+SDVWSFGV LWEI+ L  + PY G+   E L N+       G  +  P
Sbjct: 221 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPP-ERLFNL----LKTGHRMERP 274
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
               ++++  LM +CWK+ P +RP F +I   L++
Sbjct: 275 D-NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 169 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 228
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 281
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 282 MYQTMLDCWHGEPSQRPTFSEL 303

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 212 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 271
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 324
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSEL 346

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 219 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 278
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 331
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSEL 353

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 226
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 217 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 276
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 329
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSEL 351

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 11  SNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
           S L +V +LR    G+++ +      +    +N LV      K+SDF   S +   D   
Sbjct: 145 SVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL-SRVLEDDPEA 203
Query: 70  VHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN 127
            +  +   +PIRW A E++  RKFT+ SDVWSFG+ +WE++     RPY  L++ EV++ 
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG-ERPYWELSNHEVMKA 262
Query: 128 ISHLHADDGEFIYLPTPQTT-KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
           I     +DG    LPTP      I  LM +CW++    RP F +I   L +
Sbjct: 263 I-----NDG--FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR    G+ + +      +    +N LV      K+SDF   S + 
Sbjct: 137 KHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGL-SRVI 195
Query: 64  SSDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D   V+  T   +P+RW A E+++ RKFT+ SDVWS+G+ +WE+++    RPY  +++
Sbjct: 196 EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-ERPYWDMSN 254
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ I        E   LP P      L  LM +CW++   ERP F +I   L +
Sbjct: 255 QDVIKAIE-------EGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDK 304

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +  ++KISDF    D++  D         +P++WMA ES+    +TT+SDVWSF
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI+ L  + PY G+   E L N+       G  +  P    ++++  LM +CWK+
Sbjct: 239 GVLLWEIVTLGGN-PYPGIPP-ERLFNL----LKTGHRMERPD-NCSEEMYRLMLQCWKQ 291
Query: 161 SPTERPSFTEIHLFLQR 177
            P +RP F +I   L++
Sbjct: 292 EPDKRPVFADISKDLEK 308

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R 
Sbjct: 210 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 269
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 322
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSEL 344

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+ + +K   +    +N LV +   +KI+DF    D+ + D  +   N  LP++WMA 
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP 228
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D        
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------KP 281
Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              T ++  +M +CW   P++RP+F ++   L R
Sbjct: 282 ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 24  GVEHSSLKKKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           G+E+ +  +KCI +    +N LV +   +KI+DF    D+ + D  +   N  LP++WMA
Sbjct: 169 GMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMA 227
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            E++  R +T +SDVWSFGV +WEI  L    PY G+   E+ + +   H  D       
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHRMD------K 280
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
               T ++  +M +CW   P++RP+F ++   L R
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     +   +     D   +PI+WMA E +  RKFT +SDVWS+
Sbjct: 169 RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 228
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+ + +     + GE +  P P  T D+  +M +CW  
Sbjct: 229 GVTIWELMTFG-GKPYDGIPTREIPDLL-----EKGERLPQP-PICTIDVYMVMVKCWMI 281
Query: 161 SPTERPSFTEIHLFLQR 177
               RP F E+     R
Sbjct: 282 DADSRPKFKELAAEFSR 298

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 83.2 bits (204), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 499 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 558
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 559 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 611
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 612 YDVENRPGFAAVELRLR 628

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 83.2 bits (204), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 498 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 557
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 558 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 610
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 611 YDVENRPGFAAVELRLR 627

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 83.2 bits (204), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 24/163 (14%)
Query: 41  KNCLVGKKFEIKISDFATDS--DMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVW 98
           +N LV     +KI+DF      D+  ++Y+   D   +PI+WMA ES+  R+FT +SDVW
Sbjct: 148 RNVLVKSPNHVKITDFGLARLLDIDETEYH--ADGGKVPIKWMALESILRRRFTHQSDVW 205
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S+GVT+WE++     +PY+G+   E+ + +     + GE +  P P  T D+  +M +CW
Sbjct: 206 SYGVTVWELMTFG-AKPYDGIPAREIPDLL-----EKGERLPQP-PICTIDVYMIMVKCW 258
Query: 159 KRSPTERPSFTEI-------------HLFLQRKNLGYVPPMNS 188
                 RP F E+              + +Q ++LG   P++S
Sbjct: 259 MIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDLGPASPLDS 301

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 83.2 bits (204), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     +   +     D   +PI+WMA E +  RKFT +SDVWS+
Sbjct: 146 RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+ + +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTIWELMTFG-GKPYDGIPTREIPDLL-----EKGERLPQP-PICTIDVYMVMVKCWMI 258
Query: 161 SPTERPSFTEIHLFLQR 177
               RP F E+     R
Sbjct: 259 DADSRPKFKELAAEFSR 275

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 141 NILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
           + L EI+   R  PY G+++ EV+  +   +        +P P+   +++ ++M  CWK 
Sbjct: 200 ILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKN 251
Query: 161 SPTERPSFTEIHLFL 175
            P ERP+F  I   L
Sbjct: 252 RPEERPTFEYIQSVL 266

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 98  MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 154
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D Y     +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 155 VLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 213
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 214 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 253

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLV +   +K+SDF     +   D Y     T  P++W A E     K+++KSDVW+F
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD-ILDLMNECWK 159
           G+ +WE+ +L +  PY+  T+ EV+  +S  H        L  P    D I  +M  CW 
Sbjct: 192 GILMWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASDTIYQIMYSCWH 243
Query: 160 RSPTERPSFTEI 171
             P +RP+F ++
Sbjct: 244 ELPEKRPTFQQL 255

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 200 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 252
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 253 YDVENRPGFAAVELRLR 269

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 314 NILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
           + L EI+   R  PY G+++ EV+  +   +        +P P+   +++ ++M  CWK 
Sbjct: 373 ILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKN 424
Query: 161 SPTERPSFTEIHLFL 175
            P ERP+F  I   L
Sbjct: 425 RPEERPTFEYIQSVL 439

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 113 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 169
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D Y     +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 228
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 229 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 268

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 134 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 193
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 194 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 246
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 247 YDVENRPGFAAVELRLR 263

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 93  MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 149
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D Y     +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 150 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 208
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 209 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 248

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E    K    +    +N LV     +KI DF    D+ S   Y V  N  LP++WMA 
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLP 142
           ES+    +T KSDVWS+G+ LWEI +L  + PY G+  D    + I +    D  F    
Sbjct: 244 ESLFEGIYTIKSDVWSYGILLWEIFSLGVN-PYPGIPVDANFYKLIQNGFKMDQPFY--- 299
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEIHLFL 175
               T++I  +M  CW     +RPSF  +  FL
Sbjct: 300 ---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 206 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 258
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 259 YDVENRPGFAAVELRLR 275

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 97  MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 153
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D Y     +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 154 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 212
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 213 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 252

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 104 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 160
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D Y     +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 161 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 219
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 220 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 259

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 196 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 248
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 249 YDVENRPGFAAVELRLR 265

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 98  MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 154
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D Y     +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 155 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 213
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 214 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 253

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 154 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 213
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 214 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 266
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 267 YDVENRPGFAAVELRLR 283

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D++         +  LP++WMA E++  R 
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  + D+Y + ++  +P  W A ES++ R F+  SD W 
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 204 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 257 AHKPEDRPTFVALRDFL 273

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  + D+Y + ++  +P  W A ES++ R F+  SD W 
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 210 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 263 AHKPEDRPTFVALRDFL 279

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  + D+Y + ++  +P  W A ES++ R F+  SD W 
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 200 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 253 AHKPEDRPTFVALRDFL 269

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 6   HRPQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFS 64
           H  Q + + +V +LR    G+ + S      +    +N LV      K+SDF   S +  
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL-SRVLE 202
Query: 65  SDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
            D    +  T   +PIRW A E++  R F++ SDVWSFGV +WE+L     RPY  +T+ 
Sbjct: 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG-ERPYWNMTNR 261
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
           +V+ ++        E   LP P      L  LM +CW +   +RP F++I
Sbjct: 262 DVISSVE-------EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  + D+Y + ++  +P  W A ES++ R F+  SD W 
Sbjct: 144 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 204 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 257 AHKPEDRPTFVALRDFL 273

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 216 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 268
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 269 YDVENRPGFAAVELRLR 285

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + + YY+   +   P++W A E +   KF++KSDVWS
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 215
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 216 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPA-GCPREMYDLMNLCWT 268
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 269 YDVENRPGFAAVELRLR 285

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  + D+Y + ++  +P  W A ES++ R F+  SD W 
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 200 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 253 AHKPEDRPTFVALRDFL 269

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6   HRPQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFS 64
           H  Q + + +V +LR    G+ + S      +    +N LV      K+SDF     +  
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 65  S-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE 123
             D         +PIRW A E++  R F++ SDVWSFGV +WE+L     RPY  +T+ +
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG-ERPYWNMTNRD 262
Query: 124 VLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
           V+ ++        E   LP P      L  LM +CW +   +RP F++I
Sbjct: 263 VISSVE-------EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 9   QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD---SDMFS 64
           Q + + +V +LR    G+++ +      +    +N LV      K+SDF       D  S
Sbjct: 105 QFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS 164
Query: 65  SDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV 124
              Y       +PIRW A E+++ RKFT+ SDVWS+G+ +WE+++    RPY  +T+ +V
Sbjct: 165 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG-ERPYWDMTNQDV 223
Query: 125 LENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
           +  I   +        LP P      L  LM +CW++    RP F +I
Sbjct: 224 INAIEQDYR-------LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQI 264

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G+E  + +K   +    +N L+ +K  +KI DF    D+          +  LP++WMA
Sbjct: 159 KGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMA 218
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYL 141
            E++  R +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  
Sbjct: 219 PETIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRA 272
Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           P   TT ++   M +CW   P++RP+F+E+
Sbjct: 273 PD-YTTPEMYQTMLDCWHGEPSQRPTFSEL 301

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D+          +  LP++WMA E++  R 
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 41  KNCLVGKKFEIKISDFATD---SDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           +N LV      K+SDF       D  S   Y       +PIRW A E+++ RKFT+ SDV
Sbjct: 164 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 223
Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNE 156
           WS+G+ +WE+++    RPY  +T+ +V+  I   +        LP P      L  LM +
Sbjct: 224 WSYGIVMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPSALHQLMLD 275
Query: 157 CWKRSPTERPSFTEI 171
           CW++    RP F +I
Sbjct: 276 CWQKDRNHRPKFGQI 290

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D+          +  LP++WMA E++  R 
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D+          +  LP++WMA E++  R 
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 80.5 bits (197), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           +KCI +    +N L+ +K  +KI DF    D+          +  LP++WMA E++  R 
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWSFGV LWEI +L    PY G+  D E    +      +G  +  P   TT +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDEEFCRRLK-----EGTRMRAPD-YTTPE 270
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +   M +CW   P++RP+F+E+
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 135 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 193
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+     + G  +  P     +++  LM  CWK  
Sbjct: 194 ILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRPD-NCPEELYQLMRLCWKER 246
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 247 PEDRPTFDYLRSVLE 261

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRV-HDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  +D + V  ++  +P  W A ES++ R F+  SD W 
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 210 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 263 AHKPEDRPTFVALRDFL 279

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + D YY        P++W A E +  RKF+++SDVWS
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           +GVT+WE L+  + +PY+ +   EV+  I     + G+ +  P P+   ++  LM++CW 
Sbjct: 525 YGVTMWEALSYGQ-KPYKKMKGPEVMAFI-----EQGKRMECP-PECPPELYALMSDCWI 577
Query: 160 RSPTERPSFTEI 171
               +RP F  +
Sbjct: 578 YKWEDRPDFLTV 589

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 149 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 207
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+     + G  +  P     +++  LM  CWK  
Sbjct: 208 ILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRPD-NCPEELYQLMRLCWKER 260
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 261 PEDRPTFDYLRSVLE 275

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 134 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 192
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 193 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 245
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 246 PEDRPTFDYLRSVLE 260

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 80.1 bits (196), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRV-HDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +  +KI DF     +  +D + V  ++  +P  W A ES++ R F+  SD W 
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECW 158
           FGVTLWE+    +  P+ GL   ++L  I      D E   LP P+   +DI ++M +CW
Sbjct: 200 FGVTLWEMFTYGQE-PWIGLNGSQILHKI------DKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 159 KRSPTERPSFTEIHLFL 175
              P +RP+F  +  FL
Sbjct: 253 AHKPEDRPTFVALRDFL 269

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 145 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 204 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 256
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 257 PEDRPTFDYLRSVLE 271

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + D YY        P++W A E +  RKF+++SDVWS
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 198
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           +GVT+WE L+    +PY+ +   EV+  I     + G+ +  P P+   ++  LM++CW 
Sbjct: 199 YGVTMWEALSYG-QKPYKKMKGPEVMAFI-----EQGKRMECP-PECPPELYALMSDCWI 251
Query: 160 RSPTERPSFTEIH 172
               +RP F  + 
Sbjct: 252 YKWEDRPDFLTVE 264

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 144 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 202
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 203 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 255
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 256 PEDRPTFDYLRSVLE 270

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 9   QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY 67
           Q + + +V +LR    G+++ S      +    +N L+      K+SDF   S +   D 
Sbjct: 120 QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVLEDDP 178
Query: 68  YRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL 125
              +      +PIRW A E++  RKFT+ SDVWS+G+ +WE+++    RPY  +T+ +V+
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG-ERPYWEMTNQDVI 237
Query: 126 ENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEI 171
           + +        E   LP+P      L  LM +CW++    RP F EI
Sbjct: 238 KAVE-------EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEI 277

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 251 PEDRPTFDYLRSVLE 265

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSD-YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+  +   KISDF     + + +  Y+   +   P++W A E +   KF++KSDVWS
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 199
Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWK 159
           FGV +WE  +  + +PY G+   EV   +     + GE +  P     +++ DLMN CW 
Sbjct: 200 FGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGERMGCPAG-CPREMYDLMNLCWT 252
Query: 160 RSPTERPSFTEIHLFLQ 176
                RP F  + L L+
Sbjct: 253 YDVENRPGFAAVELRLR 269

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 4   LRHRPQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           +RHR Q   L  + + ++    +E+   K+   +    +NCLV  +  +K+SDF   S  
Sbjct: 113 MRHRFQTQQL--LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRY 169
Query: 63  FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL 122
              D       +  P+RW   E +   KF++KSD+W+FGV +WEI +L +  PYE  T+ 
Sbjct: 170 VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNS 228
Query: 123 EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF 168
           E  E+I+      G  +Y P   + K +  +M  CW     ERP+F
Sbjct: 229 ETAEHIAQ-----GLRLYRPHLASEK-VYTIMYSCWHEKADERPTF 268

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 127 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 185
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 186 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 244
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +     D+G    LP P      L  LM +CW++    RP F +I   L +
Sbjct: 245 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 294

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 137 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 195
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 196 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 254
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 255 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 304

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +    KI+DF   + +   + Y   +    PI+W A E++    FT KSDVWSFG
Sbjct: 140 NVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFG 198
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L+EI+   +  PY G T+ +V+  +S  +        +P  +   D L D+M  CWK 
Sbjct: 199 ILLYEIVTYGKI-PYPGRTNADVMTALSQGYR-------MPRVENCPDELYDIMKMCWKE 250
Query: 161 SPTERPSFTEIHLFL 175
              ERP+F  +   L
Sbjct: 251 KAEERPTFDYLQSVL 265

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 13  LAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVH 71
           + +V +LR   +G+++ S      +    +N LV      K+SDF   S +   D    +
Sbjct: 131 IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGM-SRVLEDDPEAAY 189
Query: 72  D--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
                 +PIRW A E++  RKFT+ SDVWS+G+ +WE+++    RPY  +++ +V++ I 
Sbjct: 190 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIE 248
Query: 130 HLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
                  E   LP P      L  LM +CW++  ++RP F +I   L +
Sbjct: 249 -------EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDK 290

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 260
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 261 DADSRPKFREL 271

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 156 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 215
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 216 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 268
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 269 DADSRPKFREL 279

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+    +++++DF     +   D   ++     PI+WMA ES+   K+T +SDVWS+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWK 159
           GVT+WE++      PY GL   EV + +     + GE   L  PQ  T D+  +M +CW 
Sbjct: 204 GVTVWELMTFGA-EPYAGLRLAEVPDLL-----EKGE--RLAQPQICTIDVYMVMVKCWM 255
Query: 160 RSPTERPSFTEI 171
                RP+F E+
Sbjct: 256 IDENIRPTFKEL 267

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 110 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 168
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 169 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 227
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +     D+G    LP P      L  LM +CW++    RP F +I   L +
Sbjct: 228 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 110 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 168
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 169 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 227
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +     D+G    LP P      L  LM +CW++    RP F +I   L +
Sbjct: 228 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 277

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 260
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 261 DADSRPKFREL 271

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 261
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 262 DADSRPKFREL 272

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMRKCWMI 258
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 259 DADSRPKFREL 269

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+    +++++DF     +   D   ++     PI+WMA ES+   K+T +SDVWS+
Sbjct: 162 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 221
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWK 159
           GVT+WE++      PY GL   EV + +     + GE   L  PQ  T D+  +M +CW 
Sbjct: 222 GVTVWELMTFGA-EPYAGLRLAEVPDLL-----EKGE--RLAQPQICTIDVYMVMVKCWM 273
Query: 160 RSPTERPSFTEI 171
                RP+F E+
Sbjct: 274 IDENIRPTFKEL 285

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVW 98
           +N LV      K+SDF   S +   D    +      +PIRW A E++  RKFT+ SDVW
Sbjct: 139 RNILVNSNLVCKVSDFGM-SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 197
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
           S+G+ +WE+++    RPY  +++ +V++ I        E   LP P      L  LM +C
Sbjct: 198 SYGIVMWEVMSYG-ERPYWDMSNQDVIKAIE-------EGYRLPPPMDCPIALHQLMLDC 249
Query: 158 WKRSPTERPSFTEIHLFLQR 177
           W++  ++RP F +I   L +
Sbjct: 250 WQKERSDRPKFGQIVNMLDK 269

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVW 98
           +N LV      K+SDF   S +   D    +      +PIRW A E++  RKFT+ SDVW
Sbjct: 145 RNILVNSNLVCKVSDFGM-SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVW 203
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
           S+G+ +WE+++    RPY  +++ +V++ I        E   LP P      L  LM +C
Sbjct: 204 SYGIVMWEVMSYG-ERPYWDMSNQDVIKAIE-------EGYRLPPPMDCPIALHQLMLDC 255
Query: 158 WKRSPTERPSFTEIHLFLQR 177
           W++  ++RP F +I   L +
Sbjct: 256 WQKERSDRPKFGQIVNMLDK 275

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   S + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL-SRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +     D+G    LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAV-----DEG--YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 152 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 211
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 212 GVTVWELMTFGS-KPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 264
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 265 DADSRPKFREL 275

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 266 DADSRPKFREL 276

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 266 DADSRPKFREL 276

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 261
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 262 DADSRPKFREL 272

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 260
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 261 DADSRPKFREL 271

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 266 DADSRPKFREL 276

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 260
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 261 DADSRPKFREL 271

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 9   QASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD---SDMFS 64
           Q + + +V +LR   +G+ + +      +    +N LV      K+SDF       +  S
Sbjct: 112 QFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
Query: 65  SDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV 124
              Y       +PIRW A E++  RKFT+ SD WS+G+ +WE+++    RPY  +++ +V
Sbjct: 172 DPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDV 230
Query: 125 LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           +  I        ++   P P     +  LM +CW++    RP F ++
Sbjct: 231 INAIEQ------DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQV 271

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 213 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 265
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 266 DADSRPKFREL 276

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 206
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 207 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 259
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 260 DADSRPKFREL 270

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 180 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 239
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 240 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 292
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 293 DADSRPKFREL 303

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 206
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 207 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 259
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 260 DADSRPKFREL 270

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 150 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 209
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 210 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 262
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 263 DADSRPKFREL 273

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 259 DADSRPKFREL 269

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 261
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 262 DADSRPKFREL 272

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 208
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 209 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 261
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 262 DADSRPKFREL 272

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 207
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 208 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 260
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 261 DADSRPKFREL 271

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 150 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 209
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 210 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 262
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 263 DADSRPKFREL 273

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 259 DADSRPKFREL 269

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 259 DADSRPKFREL 269

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF   + + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-ARVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 223
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWS+G+ LWE+ +L    PY G+  D +  + I         F  L       +
Sbjct: 224 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 276
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
           + D+M  CW   P +RP+F +I   ++++
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 259 DADSRPKFREL 269

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 206 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 258
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 259 DADSRPKFREL 269

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWS+G+ LWE+ +L    PY G+  D +  + I         F  L       +
Sbjct: 247 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 299
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
           + D+M  CW   P +RP+F +I   ++++
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 143 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 202
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 203 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 255
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 256 DADSRPKFREL 266

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 180 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 239
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWS+G+ LWE+ +L    PY G+  D +  + I         F  L       +
Sbjct: 240 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 292
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
           + D+M  CW   P +RP+F +I   ++++
Sbjct: 293 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 321

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 171 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 230
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 231 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 283
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 284 DADSRPKFREL 294

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+
Sbjct: 140 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 199
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GVT+WE++     +PY+G+   E+   +     + GE +  P P  T D+  +M +CW  
Sbjct: 200 GVTVWELMTFG-SKPYDGIPASEISSIL-----EKGERLPQP-PICTIDVYMIMVKCWMI 252
Query: 161 SPTERPSFTEI 171
               RP F E+
Sbjct: 253 DADSRPKFREL 263

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    
Sbjct: 182 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 241
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWS+G+ LWE+ +L    PY G+  D +  + I         F  L       +
Sbjct: 242 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 294
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
           + D+M  CW   P +RP+F +I   ++++
Sbjct: 295 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 323

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 5   RHRPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMF 63
           +H  Q + + +V +LR   +G+++ S      +    +N L+      K+SDF     + 
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL-GRVL 197
Query: 64  SSDYYRVHD--NTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD 121
             D    +      +PIRW + E++  RKFT+ SDVWS+G+ LWE+++    RPY  +++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG-ERPYWEMSN 256
Query: 122 LEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKRSPTERPSFTEIHLFLQR 177
            +V++ +        E   LP P      L  LM +CW++    RP F +I   L +
Sbjct: 257 QDVIKAVD-------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +    KI+DF   + +   + Y   +    PI+W A E++    FT KS+VWSFG
Sbjct: 139 NVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L+EI+   +  PY G T+ +V+  +S  +        +P  +   D L D+M  CWK 
Sbjct: 198 ILLYEIVTYGKI-PYPGRTNADVMSALSQGYR-------MPRMENCPDELYDIMKMCWKE 249
Query: 161 SPTERPSFTEIHLFL 175
              ERP+F  +   L
Sbjct: 250 KAEERPTFDYLQSVL 264

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 145 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 203
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 204 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 256
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 257 PEDRPTFDYLRSVLE 271

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 147 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 205
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 206 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 258
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 259 PEDRPTFDYLRSVLE 273

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 148 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 206
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 207 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 259
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 260 PEDRPTFDYLRSVLE 274

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 251 PEDRPTFDYLRSVLE 265

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 41  KNCLVGKKFEIKISDFATDS--DMFSSDYYRVHD-NTSLPIRWMAWESVRLRKFTTKSDV 97
           +N LV      K+SDF      +  SSD          +PIRW A E++  RKFT+ SD 
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDA 206
Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC 157
           WS+G+ +WE+++    RPY  +++ +V+  I        ++   P P     +  LM +C
Sbjct: 207 WSYGIVMWEVMSFG-ERPYWDMSNQDVINAIEQ------DYRLPPPPDCPTSLHQLMLDC 259
Query: 158 WKRSPTERPSFTEI 171
           W++    RP F ++
Sbjct: 260 WQKDRNARPRFPQV 273

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 141 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 199
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 200 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 252
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 253 PEDRPTFDYLRSVLE 267

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 140 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 198
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 199 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 251
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 252 PEDRPTFDYLRSVLE 266

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +   +     +    PI+W A E++    FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+       G  +  P     +++  LM  CWK  
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNLER-----GYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 251 PEDRPTFDYLRSVLE 265

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF   + +         +    PI+W A E++    FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGL-ARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           + L EI+   R  PY G+T+ EV++N+     + G  +  P     +++  LM  CWK  
Sbjct: 198 ILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRPD-NCPEELYQLMRLCWKER 250
Query: 162 PTERPSFTEIHLFLQ 176
           P +RP+F  +   L+
Sbjct: 251 PEDRPTFDYLRSVLE 265

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF            RV      PI+W A E++    FT KSDVWSFG
Sbjct: 308 NILVSASLVCKIADFGLA---------RV--GAKFPIKWTAPEAINFGSFTIKSDVWSFG 356
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
           + L EI+   R  PY G+++ EV+  +   +        +P P+   +++ ++M  CWK 
Sbjct: 357 ILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEELYNIMMRCWKN 408
Query: 161 SPTERPSFTEIHLFL 175
            P ERP+F  I   L
Sbjct: 409 RPEERPTFEYIQSVL 423

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 32  KKCI-KIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK 90
           K CI +    +N L+      KI DF     + +   Y V  N  LP++WMA ES+    
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 91  FTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           +T +SDVWS+G+ LWE+ +L    PY G+  D +  + I         F  L       +
Sbjct: 247 YTFESDVWSYGIFLWELFSLGS-SPYPGMPVDSKFYKMIKE------GFRMLSPEHAPAE 299
Query: 150 ILDLMNECWKRSPTERPSFTEIHLFLQRK 178
           + D+M  CW   P +RP+F +I   ++++
Sbjct: 300 MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +    K+SDF    +  S+      D   LP++W A E++R +KF+TKSDVWSF
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +  R  PY  +   +V+  +   +  D      P       + D+M  CW  
Sbjct: 373 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYDVMKNCWHL 425
Query: 161 SPTERPSFTEI 171
               RP+F ++
Sbjct: 426 DAATRPTFLQL 436

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +    K+SDF    +  S+      D   LP++W A E++R +KF+TKSDVWSF
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +  R  PY  +   +V+  +   +  D      P       + ++M  CW  
Sbjct: 201 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYEVMKNCWHL 253
Query: 161 SPTERPSFTEI 171
               RPSF ++
Sbjct: 254 DAAMRPSFLQL 264

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +    K+SDF    +  S+      D   LP++W A E++R +KF+TKSDVWSF
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +  R  PY  +   +V+  +   +  D      P       + ++M  CW  
Sbjct: 186 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYEVMKNCWHL 238
Query: 161 SPTERPSFTEI 171
               RPSF ++
Sbjct: 239 DAAMRPSFLQL 249

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +    K+SDF    +  S+      D   LP++W A E++R   F+TKSDVWSF
Sbjct: 137 RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           G+ LWEI +  R  PY  +   +V+  +   +  D      P       + ++M  CW  
Sbjct: 192 GILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYKMDAPDGCPPA------VYEVMKNCWHL 244
Query: 161 SPTERPSFTEI 171
               RPSF ++
Sbjct: 245 DAAMRPSFLQL 255

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +YY+V +    PI W A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 246
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 247 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 285

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 14  AVVPLLRNKNGVEHSSLKKKCIKIFD-FKNCLVGKKFEIKISDFATDSDMFSSDYYRVHD 72
           A+VP++       H  LK   I I    +N  +  K  +KI+DF       + +++R   
Sbjct: 125 AIVPII-------HRDLKSSNILILQKVENGDLSNKI-LKITDFG-----LAREWHRTTK 171
Query: 73  NTSL-PIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHL 131
            ++     WMA E +R   F+  SDVWS+GV LWE+L      P+ G+  L V   ++  
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT--GEVPFRGIDGLAVAYGVAM- 228
Query: 132 HADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEI 171
                  + LP P T  +    LM +CW   P  RPSFT I
Sbjct: 229 -----NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
            G+E+   ++   +    +N LV  +  +KI+DF     +    DYY V +    PI W 
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-------- 133
           A ES+    F+ +SDVWSFGV L+E+              L ++ +   + A        
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELL 244
Query: 134 DDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           ++G+ +  P P    ++ +LM  CW  SP +RPSF+ +
Sbjct: 245 EEGQRLPAP-PACPAEVHELMKLCWAPSPQDRPSFSAL 281

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
            G+E+   ++   +    +N LV  +  +KI+DF     +    DYY V +    PI W 
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL------ENISHLHADD 135
           A ES+    F+ +SDVWSFGV L+E+              L ++        +S L    
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257
Query: 136 GEFIYLPTPQTT-KDILDLMNECWKRSPTERPSFTEI 171
            E   LP P     ++ +LM  CW  SP +RPSF+ +
Sbjct: 258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
            G+E+   ++   +    +N LV  +  +KI+DF     +    DYY V +    PI W 
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-------- 133
           A ES+    F+ +SDVWSFGV L+E+              L ++     + A        
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELL 245
Query: 134 DDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           ++G+ +  P P    ++ +LM  CW  SP +RPSF+ +
Sbjct: 246 EEGQRLPAP-PACPAEVHELMKLCWAPSPQDRPSFSAL 282

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    ++++V +    PI W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 246 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+     +KI DF     +    +YYRV ++   P+ W A E ++  KF   SDVWS
Sbjct: 140 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWS 199
Query: 100 FGVTLWEILNL--ARHRPYEGLTDLEVLENISHLHA-----------DDGEFIYLPTP-Q 145
           FGVTL+E+L    +   P+   T+L     I H              + GE   LP P +
Sbjct: 200 FGVTLYELLTYCDSNQSPHTKFTEL-----IGHTQGQMTVLRLTELLERGE--RLPRPDR 252
Query: 146 TTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGY 182
              +I  LM  CW+   + RP+F  +   LQ     Y
Sbjct: 253 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKY 289

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+     +KI DF     +    +YYRV ++   P+ W A E ++  KF   SDVWS
Sbjct: 141 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWS 200
Query: 100 FGVTLWEILNL--ARHRPYEGLTDLEVLENISHLHA-----------DDGEFIYLPTP-Q 145
           FGVTL+E+L    +   P+   T+L     I H              + GE   LP P +
Sbjct: 201 FGVTLYELLTYCDSNQSPHTKFTEL-----IGHTQGQMTVLRLTELLERGE--RLPRPDR 253
Query: 146 TTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGY 182
              +I  LM  CW+   + RP+F  +   LQ     Y
Sbjct: 254 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKY 290

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV KK+ +K+ DF   S + +S +         P  WMA E +R      KSDV+SFG
Sbjct: 169 NLLVDKKYTVKVCDFGL-SRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEKSDVYSFG 226
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           V LWE+  L   +P+  L   +V+  +        E      PQ    +  ++  CW   
Sbjct: 227 VILWELATL--QQPWGNLNPAQVVAAVG-FKCKRLEIPRNLNPQ----VAAIIEGCWTNE 279
Query: 162 PTERPSFTEIHLFLQRKNLGYVPPMN 187
           P +RPSF  I   L+      VPP N
Sbjct: 280 PWKRPSFATIMDLLRPLIKSAVPPPN 305

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 249
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHLFLQ--RKNL-GYVP 184
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L +   R N+ G VP
Sbjct: 250 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLVP 302

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV KK+ +K+ DF   S + +S +         P  WMA E +R      KSDV+SFG
Sbjct: 169 NLLVDKKYTVKVCDFGL-SRLKASXFLXSKXAAGTP-EWMAPEVLRDEPSNEKSDVYSFG 226
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
           V LWE+  L   +P+  L   +V+  +        +   L  P+     +  ++  CW  
Sbjct: 227 VILWELATL--QQPWGNLNPAQVVAAVGF------KCKRLEIPRNLNPQVAAIIEGCWTN 278
Query: 161 SPTERPSFTEIHLFLQRKNLGYVPPMN 187
            P +RPSF  I   L+      VPP N
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSAVPPPN 305

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 263
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 264 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 302

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 263
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 264 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 302

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 277 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 246 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 248
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 249 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 287

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 243
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 244 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 282

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEI---LNLARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+   +  ++  P E +  +        ++ ++  L 
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 246 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 248
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 249 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 287

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 251
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 252 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 290

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEI---LNLARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+   +  ++  P E +  +        ++ ++  L 
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 244
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 245 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 283

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 250
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 251 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 289

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEI---LNLARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+   +  ++  P E +  +        ++ ++  L 
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 248
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 249 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 287

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMA 82
           G+E+   K+   +    +N LV  +  +KI DF     +    +  +V +    PI W A
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNL---ARHRPYEGLTDLE-------VLENISHLH 132
            ES+   KF+  SDVWSFGV L+E+      ++  P E +  +        ++ ++  L 
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 252
Query: 133 ADDGEFIYLPTPQTTKD-ILDLMNECWKRSPTERPSFTEIHL 173
            ++G    LP P    D I  +M ECW  +  +RPSF ++ L
Sbjct: 253 KNNGR---LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 291

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWM 81
            G+E+   ++   +    +N LV  +  +KI+DF     +    D   V +    PI W 
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-------- 133
           A ES+    F+ +SDVWSFGV L+E+              L ++     + A        
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELL 241
Query: 134 DDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
           ++G+ +  P P    ++ +LM  CW  SP +RPSF+ +
Sbjct: 242 EEGQRLPAP-PACPAEVHELMKLCWAPSPQDRPSFSAL 278

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 41  KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N LV  + ++KI DF  T +     +   V D+   P+ W A E +   KF   SDVWS
Sbjct: 143 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 202
Query: 100 FGVTLWEILN------------LARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
           FGVTL E+L             L    P  G   +  L N       +G+ +  P P   
Sbjct: 203 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT----LKEGKRLPCP-PNCP 257
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
            ++  LM +CW+  P+ R SF  +
Sbjct: 258 DEVYQLMRKCWEFQPSNRTSFQNL 281

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 41  KNCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N LV  + ++KI DF  T +     +   V D+   P+ W A E +   KF   SDVWS
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 214
Query: 100 FGVTLWEILN------------LARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
           FGVTL E+L             L    P  G   +  L N       +G+ +  P P   
Sbjct: 215 FGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT----LKEGKRLPCP-PNCP 269
Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
            ++  LM +CW+  P+ R SF  +
Sbjct: 270 DEVYQLMRKCWEFQPSNRTSFQNL 293

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+     +KI DF     +    +YYRV ++   P+ W A E ++  KF   SDVWS
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 205
Query: 100 FGVTLWEIL---NLARHRPYEGLTDLEVLEN------ISHLHADDGEFIYLPTP-QTTKD 149
           FGVTL+E+L   + ++  P + L  + + +       ++ L  + GE   LP P +   +
Sbjct: 206 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-LERGE--RLPRPDKCPCE 262
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +  LM  CW+   + RP+F  +
Sbjct: 263 VYHLMKNCWETEASFRPTFENL 284

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+     +KI DF     +    +YYRV ++   P+ W A E ++  KF   SDVWS
Sbjct: 146 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 205
Query: 100 FGVTLWEIL---NLARHRPYEGLTDLEVLEN------ISHLHADDGEFIYLPTP-QTTKD 149
           FGVTL+E+L   + ++  P + L  + + +       ++ L  + GE   LP P +   +
Sbjct: 206 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-LERGE--RLPRPDKCPCE 262
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +  LM  CW+   + RP+F  +
Sbjct: 263 VYHLMKNCWETEASFRPTFENL 284

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           +N L+     +KI DF     +    + YRV ++   P+ W A E ++  KF   SDVWS
Sbjct: 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWS 222
Query: 100 FGVTLWEIL---NLARHRPYEGLTDLEVLEN------ISHLHADDGEFIYLPTP-QTTKD 149
           FGVTL+E+L   + ++  P + L  + + +       ++ L  + GE   LP P +   +
Sbjct: 223 FGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL-LERGE--RLPRPDKCPAE 279
Query: 150 ILDLMNECWKRSPTERPSFTEI 171
           +  LM  CW+   + RP+F  +
Sbjct: 280 VYHLMKNCWETEASFRPTFENL 301

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 19  LRNKNGVEH-SSLKKKCIKIFDFKN---CLVGKKFEIKISDFATDSDMFSSDYYRVH-DN 73
           L+   GV +  S++ K +   D K     LV     +KI DF T  D+      + H  N
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI------QTHMTN 163
Query: 74  TSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYE--GLTDLEVLENISHL 131
                 WMA E      ++ K DV+S+G+ LWE++   R +P++  G     ++  + H 
Sbjct: 164 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAV-HN 220
Query: 132 HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
                    LP P     I  LM  CW + P++RPS  EI
Sbjct: 221 GTRPPLIKNLPKP-----IESLMTRCWSKDPSQRPSMEEI 255

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 44  LVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVT 103
           LV     +KI DF T  D+ +        N      WMA E      ++ K DV+S+G+ 
Sbjct: 138 LVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII 192
Query: 104 LWEILNLARHRPYE--GLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           LWE++   R +P++  G     ++  + H          LP P     I  LM  CW + 
Sbjct: 193 LWEVIT--RRKPFDEIGGPAFRIMWAV-HNGTRPPLIKNLPKP-----IESLMTRCWSKD 244
Query: 162 PTERPSFTEI 171
           P++RPS  EI
Sbjct: 245 PSQRPSMEEI 254

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 139 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 185
Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
           R +M+ E ++   ++ +SD+WS G++L E + + R+    G   + + E + ++  +   
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVE-MAVGRYPIGSGSGSMAIFELLDYIVNEPPP 244
Query: 138 FIYLPTPQTTKDILDLMNECWKRSPTERPSFTE--IHLFLQRKN 179
              LP+   + +  D +N+C  ++P ER    +  +H F++R +
Sbjct: 245 --KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 286

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +            S   
Sbjct: 123 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS--- 171
Query: 79  RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF 138
            +M+ E ++   ++ +SD+WS G++L E + + R+ P   +   E+L+ I +        
Sbjct: 172 -YMSPERLQGTHYSVQSDIWSMGLSLVE-MAVGRY-PRPPMAIFELLDYIVNEPPPK--- 225
Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTE--IHLFLQRKN 179
             LP+   + +  D +N+C  ++P ER    +  +H F++R +
Sbjct: 226 --LPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 266

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++   +KK  +     N L+ +  E+K++DF     +  +   R +     P  WMA 
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPF-WMAP 188
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLP 142
           E ++   + +K+D+WS G+T  E   LAR   P+  L  ++VL  I   +    E  Y  
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY-- 243
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               +K + + +  C  + P+ RP+  E+  H F+ R
Sbjct: 244 ----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++   +KK  +     N L+ +  E+K++DF     +  +   R +     P  WMA 
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 193
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYLP 142
           E ++   + +K+D+WS G+T  E   LAR   P+  L  ++VL  I   +    E  Y  
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY-- 248
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               +K + + +  C  + P+ RP+  E+  H F+ R
Sbjct: 249 ----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 281

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G+++   +KK  +     N L+ +  E+K++DF     +  +   R +     P  WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPF-WMA 172
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYL 141
            E ++   + +K+D+WS G+T  E   LAR   P+  L  ++VL  I   +    E  Y 
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY- 228
Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
                +K + + +  C  + P+ RP+  E+  H F+ R
Sbjct: 229 -----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G+++   +KK  +     N L+ +  E+K++DF     +  +   R +     P  WMA
Sbjct: 115 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMA 172
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIYL 141
            E ++   + +K+D+WS G+T  E   LAR   P+  L  ++VL  I   +    E  Y 
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIE---LARGEPPHSELHPMKVLFLIPKNNPPTLEGNY- 228
Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
                +K + + +  C  + P+ RP+  E+  H F+ R
Sbjct: 229 -----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 51  IKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLW 105
           +KI DF  AT+   +S  +    +  S  I WMA E +R++    ++ +SDV++FG+ L+
Sbjct: 159 VKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 106 EILNLARHRPYEGLTDL-EVLENISHLH-ADDGEFIYLPTPQTTKDILDLMNECWKRSPT 163
           E++      PY  + +  +++E +     + D   +    P+  K    LM EC K+   
Sbjct: 217 ELM--TGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR---LMAECLKKKRD 271
Query: 164 ERPSFTEI 171
           ERPSF  I
Sbjct: 272 ERPSFPRI 279

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 51  IKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLW 105
           +KI DF  AT+   +S  +    +  S  I WMA E +R++    ++ +SDV++FG+ L+
Sbjct: 159 VKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216
Query: 106 EILNLARHRPYEGLTDL-EVLENISHLH-ADDGEFIYLPTPQTTKDILDLMNECWKRSPT 163
           E++      PY  + +  +++E +     + D   +    P+  K    LM EC K+   
Sbjct: 217 ELMT--GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR---LMAECLKKKRD 271
Query: 164 ERPSFTEI 171
           ERPSF  I
Sbjct: 272 ERPSFPRI 279

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARH--RPYEGLTD----LEVLENISHL 131
           R +M+ E ++   ++ +SD+WS G++L E + + R+   P +   D    + + E + ++
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVE-MAVGRYPIPPPDAKEDSRPPMAIFELLDYI 225
Query: 132 HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTE--IHLFLQRKN 179
             +      LP+   + +  D +N+C  ++P ER    +  +H F++R +
Sbjct: 226 VNEPPP--KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 273

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS      D+    + ++  E +  R    K D+WS 
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 196 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 246
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 247 NPSQRPMLREV 257

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS      D+    + ++  E +  R    K D+WS 
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSL 218
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 219 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 269
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 270 NPSQRPMLREV 280

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 10  ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
           A  LA       +N + H ++  K I +   ++   G    IK+SD      +   D  +
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 70  VHDNTSLPIRWMAWESVRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
                   I W+  E +   K     +D WSFG TLWEI +    +P   L     L+  
Sbjct: 179 ER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICS-GGDKPLSALDSQRKLQFY 231
Query: 129 SHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              H        LP P+   ++ +L+N C    P  RPSF  I
Sbjct: 232 EDRHQ-------LPAPKAA-ELANLINNCMDYEPDHRPSFRAI 266

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 21  NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDF------ATDSDMFSSDYYRVHDNT 74
           +KNG  H  +K          N L+G+   ++I+DF      AT  D+  +   +    T
Sbjct: 133 HKNGQIHRDVKAG--------NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 75  SLPIRWMAWESV-RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA 133
                WMA E + ++R +  K+D+WSFG+T  E+   A   PY     ++VL  +  L  
Sbjct: 185 PC---WMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKVL--MLTLQN 237
Query: 134 DDGEFIYLPTPQTTKDIL--------DLMNECWKRSPTERPSFTEI--HLFLQR 177
           D      L T    K++L         +++ C ++ P +RP+  E+  H F Q+
Sbjct: 238 DPPS---LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT+   +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E+  +    PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 212 VYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 265
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 266 MAECLKKKRDERPLFPQI 283

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT+   +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E++      PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 192 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 245
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 246 MAECLKKKRDERPLFPQI 263

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS      D     + ++  E +  R    K D+WS 
Sbjct: 138 ENLLLGSAGELKIADFGWSVHAPSSR----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 194 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 244
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 245 NPSQRPMLREV 255

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWES 85
           L  K I   D K  N  + +   +KI DF  AT+   +S  +    +  S  I WMA E 
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ--FEQLSGSILWMAPEV 205
Query: 86  VRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFI 139
           +R++    ++ +SDV++FG+ L+E+  +    PY  + + +    +    +L  D  + +
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-V 262
Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
               P+  K    LM EC K+   ERP F +I
Sbjct: 263 RSNCPKAMK---RLMAECLKKKRDERPLFPQI 291

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 21  NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDF------ATDSDMFSSDYYRVHDNT 74
           +KNG  H  +K          N L+G+   ++I+DF      AT  D+  +   +    T
Sbjct: 138 HKNGQIHRDVKAG--------NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 75  SLPIRWMAWESV-RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA 133
                WMA E + ++R +  K+D+WSFG+T  E+   A   PY     ++VL  +  L  
Sbjct: 190 PC---WMAPEVMEQVRGYDFKADIWSFGITAIELATGA--APYHKYPPMKVL--MLTLQN 242
Query: 134 DDGEFIYLPTPQTTKDIL--------DLMNECWKRSPTERPSFTEI--HLFLQR 177
           D      L T    K++L         +++ C ++ P +RP+  E+  H F Q+
Sbjct: 243 DPPS---LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 51  IKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSDVWSFGVTLW 105
           +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SDV++FG+ L+
Sbjct: 147 VKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 204
Query: 106 EILNLARHRPYEGLTDL-EVLENISHLH-ADDGEFIYLPTPQTTKDILDLMNECWKRSPT 163
           E++      PY  + +  +++E +     + D   +    P+  K    LM EC K+   
Sbjct: 205 ELM--TGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR---LMAECLKKKRD 259
Query: 164 ERPSFTEI 171
           ERPSF  I
Sbjct: 260 ERPSFPRI 267

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS         S  + ++  E +  R    K D+WS 
Sbjct: 138 ENLLLGSAGELKIADFGWSCHAPSSR----RTTLSGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 194 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 244
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 245 NPSQRPMLREV 255

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR----LRKFTTKSDV 97
           N L+    ++K+ DF   S     D  +  D    P  +MA E +      + ++ KSD+
Sbjct: 140 NVLINALGQVKMCDFGI-SGYLVDDVAKDIDAGCKP--YMAPERINPELNQKGYSVKSDI 196
Query: 98  WSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           WS G+T+ E+  L    PY+   T  + L+ +    +       LP  + + + +D  ++
Sbjct: 197 WSLGITMIELAIL--RFPYDSWGTPFQQLKQVVEEPSPQ-----LPADKFSAEFVDFTSQ 249
Query: 157 CWKRSPTERPSFTEI 171
           C K++  ERP++ E+
Sbjct: 250 CLKKNSKERPTYPEL 264

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR----LRKFTTKSDV 97
           N L+    ++K+ DF     +  S   +  D    P  +MA E +      + ++ KSD+
Sbjct: 184 NVLINALGQVKMCDFGISGYLVDS-VAKTIDAGCKP--YMAPERINPELNQKGYSVKSDI 240
Query: 98  WSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           WS G+T+ E+  L    PY+   T  + L+ +    +       LP  + + + +D  ++
Sbjct: 241 WSLGITMIELAIL--RFPYDSWGTPFQQLKQVVEEPSPQ-----LPADKFSAEFVDFTSQ 293
Query: 157 CWKRSPTERPSFTEI 171
           C K++  ERP++ E+
Sbjct: 294 CLKKNSKERPTYPEL 308

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEXIEGRXHDEKVDLW 195
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 196 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 246
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 247 KHNPSQRPXLREV 259

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 10  ASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR 69
           A  LA       +N + H ++  K I +   ++   G    IK+SD      +   D  +
Sbjct: 119 AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 70  VHDNTSLPIRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
                   I W+  E +   +     +D WSFG TLWEI +    +P   L     L+  
Sbjct: 179 ER------IPWVPPECIENPKNLNLATDKWSFGTTLWEICS-GGDKPLSALDSQRKLQFY 231
Query: 129 SHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
              H        LP P+   ++ +L+N C    P  RPSF  I
Sbjct: 232 EDRHQ-------LPAPKAA-ELANLINNCMDYEPDHRPSFRAI 266

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E++      PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 192 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 245
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 246 MAECLKKKRDERPLFPQI 263

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+++   +KK  +     N L+ ++ ++K++DF     +  +   R +     P  WMA 
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NTFVGTPF-WMAP 189
Query: 84  ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD-----GEF 138
           E ++   + +K+D+WS G+T  E   LA+  P    +D+  +  +  +  ++     G+F
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIE---LAKGEPPN--SDMHPMRVLFLIPKNNPPTLVGDF 244
Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
                   TK   + ++ C  + P+ RP+  E+  H F+ +
Sbjct: 245 --------TKSFKEFIDACLNKDPSFRPTAKELLKHKFIVK 277

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E++      PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 192 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 245
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 246 MAECLKKKRDERPLFPQI 263

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E++      PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 194 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 247
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 248 MAECLKKKRDERPLFPQI 265

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSRRXXLXGT----LDYLPPEMIEGRMHDEKVDLWSL 197
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 198 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 248
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 249 NPSQRPMLREV 259

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWES 85
           L  K I   D K  N  + +   +KI DF  AT    +S  +    +  S  I WMA E 
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEV 205
Query: 86  VRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFI 139
           +R++    ++ +SDV++FG+ L+E+  +    PY  + + +    +    +L  D  + +
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-V 262
Query: 140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI 171
               P+  K    LM EC K+   ERP F +I
Sbjct: 263 RSNCPKAMK---RLMAECLKKKRDERPLFPQI 291

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E++      PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 197 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 250
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 251 MAECLKKKRDERPLFPQI 268

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E++      PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 197 VYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 250
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 251 MAECLKKKRDERPLFPQI 268

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S  +    +  S  I WMA E +R++    ++ +SD
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQ--FEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLE---VLENISHLHADDGEFIYLPTPQTTKDILDL 153
           V++FG+ L+E+  +    PY  + + +    +    +L  D  + +    P+  K    L
Sbjct: 219 VYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSK-VRSNCPKAMK---RL 272
Query: 154 MNECWKRSPTERPSFTEI 171
           M EC K+   ERP F +I
Sbjct: 273 MAECLKKKRDERPLFPQI 290

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRTELCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 244 NPSQRPMLREV 254

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 190
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 191 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 241
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 242 KHNPSQRPMLREV 254

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 163 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 216
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 217 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 267
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 268 KHNPSQRPMLREV 280

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 141 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 195 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 245
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 246 KHNPSQRPMLREV 258

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 136 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 189
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 190 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 240
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 241 KHNPSQRPMLREV 253

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 134 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 187
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 188 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 238
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 239 KHNPSQRPMLREV 251

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS       +    + ++  E +  R    K D+WS 
Sbjct: 138 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 194 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 244
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 245 NPSQRPMLREV 255

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 244 NPSQRPMLREV 254

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS       +    + ++  E +  R    K D+WS 
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 244 NPSQRPMLREV 254

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS       +    + ++  E +  R    K D+WS 
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 197
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 198 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 248
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 249 NPSQRPMLREV 259

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS       +    + ++  E +  R    K D+WS 
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 244 NPSQRPMLREV 254

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 139 ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 194
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 195 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 245
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 246 NPSQRPMLREV 256

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 80  WMAWESVRLRKFTT---KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           W+A E+++ +   T    +D+WSF V LWE++   R  P+  L+++E+   +    A +G
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKV----ALEG 227
Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
               +P P  +  +  LM  C    P +RP F  I   L++
Sbjct: 228 LRPTIP-PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 194 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 244
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 245 KHNPSQRPMLREV 257

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 194 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 244
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 245 KHNPSQRPMLREV 257

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 196 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 246
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 247 KHNPSQRPMLREV 259

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 142 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 196 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 246
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 247 KHNPSQRPMLREV 259

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRAALCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 244 NPSQRPMLREV 254

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 196 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 246
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 247 NPSQRPMLREV 257

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 140 ENLLLGSAGELKIADFGWSVHAPSSRRAALCGT----LDYLPPEMIEGRMHDEKVDLWSL 195
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 196 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 246
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 247 NPSQRPMLREV 257

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+G   E+KI+DF       SS    +       + ++  E +  R    K D+WS 
Sbjct: 137 ENLLLGSAGELKIADFGWSVHAPSSRRTXLCGT----LDYLPPEMIEGRMHDEKVDLWSL 192
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   K 
Sbjct: 193 GVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLLKH 243
Query: 161 SPTERPSFTEI 171
           +P++RP   E+
Sbjct: 244 NPSQRPMLREV 254

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI+DF       SS        T+L   + ++  E +  R    K D+W
Sbjct: 154 ENLLLGSAGELKIADFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 207
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 208 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 258
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 259 KHNPSQRPMLREV 271

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK---FTTKSD 96
           N  + +   +KI DF  AT    +S    +V   T   + WMA E +R++    F+ +SD
Sbjct: 162 NIFLHEGLTVKIGDFGLATVKSRWSGSQ-QVEQPTG-SVLWMAPEVIRMQDNNPFSFQSD 219
Query: 97  VWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHAD-DGEFIYLPTPQTTKDILDLM 154
           V+S+G+ L+E+  +    PY  + +  +++  +   +A  D   +Y   P+  K    L+
Sbjct: 220 VYSYGIVLYEL--MTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK---RLV 274
Query: 155 NECWKRSPTERPSFTEI 171
            +C K+   ERP F +I
Sbjct: 275 ADCVKKVKEERPLFPQI 291

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N  +     +K+ D       FSS     H     P  +M+ E +    +  KSD+WS G
Sbjct: 166 NVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSDIWSLG 223
Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
             L+E+  L    P+ G  D   L ++     +  ++  LP+   ++++  L+N C    
Sbjct: 224 CLLYEMAAL--QSPFYG--DKMNLYSLCK-KIEQCDYPPLPSDHYSEELRQLVNMCINPD 278
Query: 162 PTERPSFTEIHLFLQR 177
           P +RP  T ++   +R
Sbjct: 279 PEKRPDVTYVYDVAKR 294

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           N + +   KK   +    +N L+G   E+KI+DF       SS    +       + ++ 
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT----LDYLP 174
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            E +  R    K D+WS GV  +E   L    P+E  T  +  + IS +     +F+   
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEF--LVGKPPFEANTYQDTYKRISRVEFTFPDFV--- 229
Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTEI 171
               T+   DL++   K +P++RP   E+
Sbjct: 230 ----TEGARDLISRLLKHNPSQRPMLREV 254

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 24  GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW 83
           G+E+   +K   +     N LVG+   IKI+DF   ++   SD   +  NT     +MA 
Sbjct: 149 GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAP 206
Query: 84  ESV-RLRK-FTTKS-DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD-DGEFI 139
           ES+   RK F+ K+ DVW+ GVTL+    +    P+       + E I  LH+    + +
Sbjct: 207 ESLSETRKIFSGKALDVWAMGVTLYCF--VFGQCPF-------MDERIMCLHSKIKSQAL 257
Query: 140 YLP-TPQTTKDILDLMNECWKRSPTERPSFTEIHL 173
             P  P   +D+ DL+     ++P  R    EI L
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI++F       SS        T+L   + ++  E +  R    K D+W
Sbjct: 140 ENLLLGSAGELKIANFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 194 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 244
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 245 KHNPSQRPMLREV 257

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 38  FDFKNCLVGKKFEIKISDFATDSDMFS--SDYYRVHDNTSLPI-RWMAWE----SVRLRK 90
           F  +N LV    +  I+D    + M S  SDY  + +N  +   R+MA E     +R   
Sbjct: 139 FKSRNVLVKSNLQCCIADLGL-AVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 197
Query: 91  FTTK--SDVWSFGVTLWEILN-------LARHRP--YEGLTDLEVLENISHLHADDGEFI 139
           F +   +D+W+FG+ LWEI         +  +RP  Y+ + +    E++  +   D +  
Sbjct: 198 FESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTP 257
Query: 140 YLPTPQTTKDIL----DLMNECWKRSPTERPSFTEIHLFLQR 177
            +P       +L     +M ECW  +P+ R +   I   LQ+
Sbjct: 258 TIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQK 299

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTKSDVW 98
           +N L+G   E+KI++F       SS        T+L   + ++  E +  R    K D+W
Sbjct: 139 ENLLLGSAGELKIANFGWSVHAPSSR------RTTLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW 158
           S GV  +E L      P+E  T  E  + IS +     +F+       T+   DL++   
Sbjct: 193 SLGVLCYEFL--VGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISRLL 243
Query: 159 KRSPTERPSFTEI 171
           K +P++RP   E+
Sbjct: 244 KHNPSQRPMLREV 256

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 51  IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNL 110
           IKI DF   +++F SD +    N +    +MA E  + R  T K D+WS GV ++ +L  
Sbjct: 166 IKIIDFGL-AELFKSDEHST--NAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG 221
Query: 111 ARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTE 170
               P+ G +  EV +  ++   +        TPQ     +DL+ +   + P  RPS  +
Sbjct: 222 CL--PFTGTSLEEVQQKATYKEPNYAVECRPLTPQA----VDLLKQMLTKDPERRPSAAQ 275
Query: 171 I 171
           +
Sbjct: 276 V 276

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+ ++  IK++DF    +  S D+ +   +    + +MA E V  R  T  +D WSF
Sbjct: 155 ENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL-PTPQTTKDILDLMNECWK 159
           GV ++E+L      P++G    E +  I  L A  G   +L P  Q+      L+   +K
Sbjct: 213 GVLMFEMLTGT--LPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQS------LLRMLFK 262
Query: 160 RSPTER 165
           R+P  R
Sbjct: 263 RNPANR 268

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+ ++  IK++DF    +  S D+ +   +    + +MA E V  R  T  +D WSF
Sbjct: 156 ENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 213
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL-PTPQTTKDILDLMNECWK 159
           GV ++E+L      P++G    E +  I  L A  G   +L P  Q+      L+   +K
Sbjct: 214 GVLMFEMLTGT--LPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQS------LLRMLFK 263
Query: 160 RSPTER 165
           R+P  R
Sbjct: 264 RNPANR 269

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 57/205 (27%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 130 LREKHQIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 176
Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDG 136
           R +MA E ++   ++ +SD+WS G++L E L + R+  P     +LE +     +  ++G
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVE-LAVGRYPIPPPDAKELEAIFGRPVVDGEEG 235
Query: 137 E---------------------------------FIY------LPTPQTTKDILDLMNEC 157
           E                                 +I       LP    T D  + +N+C
Sbjct: 236 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKC 295
Query: 158 WKRSPTERPSFTEI--HLFLQRKNL 180
             ++P ER     +  H F++R  +
Sbjct: 296 LIKNPAERADLKMLTNHTFIKRSEV 320

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G+++   ++K  +     N L+ ++ ++K++DF     +  +   R +     P  WMA
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NXFVGTPF-WMA 184
Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            E ++   +  K+D+WS G+T  E   LA+  P    +DL  +  +  +  +       P
Sbjct: 185 PEVIKQSAYDFKADIWSLGITAIE---LAKGEPPN--SDLHPMRVLFLIPKNSP-----P 234
Query: 143 T--PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           T   Q +K   + +  C  + P  RP+  E+  H F+ R
Sbjct: 235 TLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 273

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N L+ ++  IK++DF    +  S D+ +   +    + +MA E V  R  T  +D WSF
Sbjct: 155 ENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL-PTPQTTKDILDLMNECWK 159
           GV ++E+L      P++G    E +  I  L A  G   +L P  Q+      L+   +K
Sbjct: 213 GVLMFEMLTGT--LPFQGKDRKETMTMI--LKAKLGMPQFLSPEAQS------LLRMLFK 262
Query: 160 RSPTER 165
           R+P  R
Sbjct: 263 RNPANR 268

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21  NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
           +++G+ HS LK     I D           +K+ DF   + M       V D+    + +
Sbjct: 128 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 81  MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
           M  E+++             K + KSDVWS G  L+       +  Y      +++  IS
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 231
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
            LHA  D    I  P  P+  KD+ D++  C KR P +R S  E+  H ++Q
Sbjct: 232 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR----LRKFTTKSDV 97
           N L+    ++K  DF   S     D  +  D    P  + A E +      + ++ KSD+
Sbjct: 167 NVLINALGQVKXCDFGI-SGYLVDDVAKDIDAGCKP--YXAPERINPELNQKGYSVKSDI 223
Query: 98  WSFGVTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           WS G+T  E+  L    PY+   T  + L+ +    +       LP  + + + +D  ++
Sbjct: 224 WSLGITXIELAIL--RFPYDSWGTPFQQLKQVVEEPSPQ-----LPADKFSAEFVDFTSQ 276
Query: 157 CWKRSPTERPSFTEI 171
           C K++  ERP++ E+
Sbjct: 277 CLKKNSKERPTYPEL 291

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 53/200 (26%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF     +  S       N+ +  
Sbjct: 120 LREKHKIMHRDVKPS--------NILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGT 166
Query: 79  R-WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
           R +M+ E ++   ++ +SD+WS G++L E+       P     +LE++     +  D  E
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEGDAAE 225
Query: 138 -------------------------------FIYLPTPQTTKDIL-----DLMNECWKRS 161
                                           +  P P+    +      D +N+C  ++
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 162 PTERPSFTE--IHLFLQRKN 179
           P ER    +  +H F++R +
Sbjct: 286 PAERADLKQLMVHAFIKRSD 305

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21  NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
           +++G+ HS LK     I D           +K+ DF   + M       V D+    + +
Sbjct: 124 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 81  MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
           M  E+++             K + KSDVWS G  L+       +  Y      +++  IS
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 227
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
            LHA  D    I  P  P+  KD+ D++  C KR P +R S  E+  H ++Q
Sbjct: 228 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           L+ K+GV H  +K          N L+ ++ +IK+ DF     +      +  D ++   
Sbjct: 140 LKEKHGVIHRDVKPS--------NILLDERGQIKLCDFGISGRLVDD---KAKDRSAGCA 188
Query: 79  RWMAWESV-----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLH 132
            +MA E +         +  ++DVWS G++L E+       PY+   TD EVL  +    
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT--GQFPYKNCKTDFEVLTKVLQE- 245
Query: 133 ADDGEFIYLPTPQT-TKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               E   LP     + D    + +C  +   +RP + ++  H F++R
Sbjct: 246 ----EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 21  NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
           +++G+ HS LK     I D           +K+ DF   + M       V D+    + +
Sbjct: 144 HQHGIVHSDLKPANFLIVDGM---------LKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 81  MAWESVR-----------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
           M  E+++             K + KSDVWS G  L+       +  Y      +++  IS
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQQIINQIS 247
Query: 130 HLHA--DDGEFIYLP-TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
            LHA  D    I  P  P+  KD+ D++  C KR P +R S  E+  H ++Q
Sbjct: 248 KLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	188
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-55
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-54
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-53
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-53
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-51
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-48
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-48
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-47
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-47
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-47
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-47
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-47
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-47
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-46
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	8e-46
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-45
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-45
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-45
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-45
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-45
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-45
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-44
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-44
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-44
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-44
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-44
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-44
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-44
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-44
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-44
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-44
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-44
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-43
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-43
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-43
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-43
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-43
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-43
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-43
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-43
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-43
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-42
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-41
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-41
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-41
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-41
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-40
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-40
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-40
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	9e-40
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-39
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-39
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-39
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-29
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-29
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-29
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-28
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-27
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-26
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-26
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-22
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-18
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-17
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-15
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-10
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-09
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-07
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-07
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-05
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-04
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-04

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  175 bits (447), Expect = 6e-55
 Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +KI DF    D++S+DYYRV   T LPIRWM  ES+  RKFTT+SDVWSFG
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI    + +P+  L++ E ++ I+           L  P+     +  +M  CW+R
Sbjct: 248 VVLWEIFTYGK-QPWYQLSNTEAIDCITQGR-------ELERPRACPPEVYAIMRGCWQR 299

Query: 161 SPTERPSFTEIHLFLQR 177
            P +R S  ++H  LQ 
Sbjct: 300 EPQQRHSIKDVHARLQA 316

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  174 bits (443), Expect = 1e-54
 Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG    +KI DF    D++S+DYYRV  +T LPIRWM  ES+  RKFTT+SDVWSFG
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 222

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI    + +P+  L++ EV+E I+           L  P+     + D+M  CW+R
Sbjct: 223 VILWEIFTYGK-QPWFQLSNTEVIECITQGR-------VLERPRVCPKEVYDVMLGCWQR 274

Query: 161 SPTERPSFTEIHLFLQR 177
            P +R +  EI+  L  
Sbjct: 275 EPQQRLNIKEIYKILHA 291

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  170 bits (432), Expect = 5e-53
 Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 9/136 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV  K  +KISD     +++++DYY++  N+ LPIRWMA E++   KF+  SD+WS+G
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 217

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWE+ +    +PY G ++ +V+E I      + +   LP P      +  LM ECW  
Sbjct: 218 VVLWEVFSYGL-QPYCGYSNQDVVEMI-----RNRQ--VLPCPDDCPAWVYALMIECWNE 269

Query: 161 SPTERPSFTEIHLFLQ 176
            P+ RP F +IH  L+
Sbjct: 270 FPSRRPRFKDIHSRLR 285

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  170 bits (434), Expect = 8e-53
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +KI+DF    +++S+DYY+   N ++PIRWM  ES+   ++TT+SDVW++G
Sbjct: 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG 263

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI +    +PY G+   EV+  +   +        L  P+     L +LM  CW +
Sbjct: 264 VVLWEIFSYGL-QPYYGMAHEEVIYYVRDGN-------ILACPENCPLELYNLMRLCWSK 315

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RPSF  IH  LQR
Sbjct: 316 LPADRPSFCSIHRILQR 332

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  166 bits (422), Expect = 3e-51
 Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++   FTT SDVWSFG
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI  LA   PY+GL++ +VL  +      +G    L  P    D+L +LM  CW+ 
Sbjct: 228 VVLWEIATLAEQ-PYQGLSNEQVLRFV-----MEGG--LLDKPDNCPDMLFELMRMCWQY 279

Query: 161 SPTERPSFTEIHLFLQR 177
           +P  RPSF EI   ++ 
Sbjct: 280 NPKMRPSFLEIISSIKE 296

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  158 bits (403), Expect = 2e-48
 Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NC++     + ++DF     ++S DYYR      +P++W+A ES+  R +T+KSDVW+FG
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           VT+WEI       PY G+ + E+ + +       G    L  P+   D L ++M  CW+ 
Sbjct: 237 VTMWEIATRGM-TPYPGVQNHEMYDYL-----LHGH--RLKQPEDCLDELYEIMYSCWRT 288

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RP+F+ + L L++
Sbjct: 289 DPLDRPTFSVLRLQLEK 305

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  159 bits (403), Expect = 2e-48
 Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NC++ +   + ++DF     ++S DYYR    + LP++W+A ES+    +T  SDVW+FG
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFG 226

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           VT+WEI+   +  PY G+ + E+   +       G    L  P    + + DLM +CW  
Sbjct: 227 VTMWEIMTRGQ-TPYAGIENAEIYNYL-----IGGN--RLKQPPECMEEVYDLMYQCWSA 278

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RPSFT + + L+ 
Sbjct: 279 DPKQRPSFTCLRMELEN 295

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  157 bits (398), Expect = 2e-47
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +   +KI+DF    D+ + DYY+   N  LP++WMA E++  R +T +SDVWSFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V +WEI  L    PY G+   E+ + +   H        +  P    + L  +M +CW  
Sbjct: 247 VLMWEIFTLGGS-PYPGIPVEELFKLLKEGH-------RMDKPANCTNELYMMMRDCWHA 298

Query: 161 SPTERPSFTEIHLFLQR 177
            P++RP+F ++   L R
Sbjct: 299 VPSQRPTFKQLVEDLDR 315

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  157 bits (399), Expect = 3e-47
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +   +KI+DF    D+ + DYY+   N  LP++WMA E++  R +T +SDVWSFG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V +WEI  L    PY G+   E+ + +   H        +  P    + L  +M +CW  
Sbjct: 293 VLMWEIFTLGGS-PYPGIPVEELFKLLKEGH-------RMDKPANCTNELYMMMRDCWHA 344

Query: 161 SPTERPSFTEIHLFLQR 177
            P++RP+F ++   L R
Sbjct: 345 VPSQRPTFKQLVEDLDR 361

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  155 bits (395), Expect = 3e-47
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +  ++KISDF    D++  D Y       +P++WMA ES+    +TT+SDVWSFG
Sbjct: 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI+ L  + PY G+    +   +   H        +  P    + +  LM +CWK+
Sbjct: 240 VLLWEIVTLGGN-PYPGIPPERLFNLLKTGH-------RMERPDNCSEEMYRLMLQCWKQ 291

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RP F +I   L++
Sbjct: 292 EPDKRPVFADISKDLEK 308

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  155 bits (395), Expect = 4e-47
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)

Query: 42  NCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVW 98
           NCL+         KI DF    D++ + YYR      LP++WM  E+     FT+K+D W
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
           SFGV LWEI +L    PY   ++ EVLE ++           +  P+     +  +M +C
Sbjct: 230 SFGVLLWEIFSLGY-MPYPSKSNQEVLEFVTSGG-------RMDPPKNCPGPVYRIMTQC 281

Query: 158 WKRSPTERPSFTEIHLFLQR 177
           W+  P +RP+F  I   ++ 
Sbjct: 282 WQHQPEDRPNFAIILERIEY 301

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  154 bits (392), Expect = 5e-47
 Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 11/139 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWS 99
           NC++ +KF +K++DF    DM+  +YY VH+ T   LP++WMA ES++ +KFTTKSDVWS
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECW 158
           FGV LWE++      PY  +   ++   +       G    L  P+   D L ++M +CW
Sbjct: 218 FGVLLWELMTRGA-PPYPDVNTFDITVYL-----LQGR--RLLQPEYCPDPLYEVMLKCW 269

Query: 159 KRSPTERPSFTEIHLFLQR 177
                 RPSF+E+   +  
Sbjct: 270 HPKAEMRPSFSELVSRISA 288

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  156 bits (396), Expect = 7e-47
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 12/140 (8%)

Query: 42  NCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVW 98
           NCL+         KI DF    D++ + YYR      LP++WM  E+     FT+K+D W
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270

Query: 99  SFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNEC 157
           SFGV LWEI +L    PY   ++ EVLE ++           +  P+     +  +M +C
Sbjct: 271 SFGVLLWEIFSLGY-MPYPSKSNQEVLEFVTSGG-------RMDPPKNCPGPVYRIMTQC 322

Query: 158 WKRSPTERPSFTEIHLFLQR 177
           W+  P +RP+F  I   ++ 
Sbjct: 323 WQHQPEDRPNFAIILERIEY 342

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  155 bits (393), Expect = 2e-46
 Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +   +KI+DF    D+   DYY+   N  LP++WMA E++  R +T +SDVWSFG
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI  L    PY G+   E+ + +   H        +  P    + L  +M +CW  
Sbjct: 281 VLLWEIFTLGGS-PYPGVPVEELFKLLKEGH-------RMDKPSNCTNELYMMMRDCWHA 332

Query: 161 SPTERPSFTEIHLFLQR 177
            P++RP+F ++   L R
Sbjct: 333 VPSQRPTFKQLVEDLDR 349

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  152 bits (386), Expect = 8e-46
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
           VT+WE++     +PY+G+   E+   +     + GE   LP P   T D+  +M +CW  
Sbjct: 207 VTVWELMTFGS-KPYDGIPASEISSIL-----EKGE--RLPQPPICTIDVYMIMRKCWMI 258

Query: 161 SPTERPSFTEIHLFLQR 177
               RP F E+ +   +
Sbjct: 259 DADSRPKFRELIIEFSK 275

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  150 bits (382), Expect = 1e-45
 Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV     +K+ DF     +   DYY+    T LPI+WM+ ES+  R+FTT SDVW F 
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYK-ASVTRLPIKWMSPESINFRRFTTASDVWMFA 201

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
           V +WEIL+  + +P+  L + +V+  +     + G+   LP P      +  LM  CW  
Sbjct: 202 VCMWEILSFGK-QPFFWLENKDVIGVL-----EKGD--RLPKPDLCPPVLYTLMTRCWDY 253

Query: 161 SPTERPSFTEIHLFLQR 177
            P++RP FTE+   L  
Sbjct: 254 DPSDRPRFTELVCSLSD 270

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  150 bits (381), Expect = 1e-45
 Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFG 204

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V +WEIL     +P++G+ + +V+  I     ++GE   LP P      L  LM +CW  
Sbjct: 205 VCMWEILMHGV-KPFQGVKNNDVIGRI-----ENGE--RLPMPPNCPPTLYSLMTKCWAY 256

Query: 161 SPTERPSFTEIHLFLQR 177
            P+ RP FTE+   L  
Sbjct: 257 DPSRRPRFTELKAQLST 273

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  150 bits (382), Expect = 2e-45
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 11/139 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWS 99
           NC++ + F +K++DF    D+   +YY V  +    LP++W A ES++  +FTTKSDVWS
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECW 158
           FGV LWE+L      PY  +   ++   +       G    LP P+   D L  +M +CW
Sbjct: 214 FGVLLWELLTRGA-PPYRHIDPFDLTHFL-----AQGR--RLPQPEYCPDSLYQVMQQCW 265

Query: 159 KRSPTERPSFTEIHLFLQR 177
           +  P  RP+F  +   +++
Sbjct: 266 EADPAVRPTFRVLVGEVEQ 284

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  150 bits (382), Expect = 3e-45
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R +T +SDVWSFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237

Query: 102 VTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           V LWEI +L    PY G+  D E    +            +  P  T   +   M +CW 
Sbjct: 238 VLLWEIFSLGAS-PYPGVKIDEEFCRRLKEGT-------RMRAPDYTTPEMYQTMLDCWH 289

Query: 160 RSPTERPSFTEIHLFLQR 177
             P++RP+F+E+   L  
Sbjct: 290 GEPSQRPTFSELVEHLGN 307

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  150 bits (380), Expect = 5e-45
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 22/151 (14%)

Query: 42  NCLVGKKFEIKISDFATDSDMF-SSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           N L+     +KI DF     +    +YYRV ++   P+ W A E ++  KF   SDVWSF
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223

Query: 101 GVTLWEILNLARHR-------------PYEGLTDLEVLENISHLHADDGEFIYLPTPQT- 146
           GVTL+E+L                       +T L + E +     + GE   LP P   
Sbjct: 224 GVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL-----ERGE--RLPRPDKC 276

Query: 147 TKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
             ++  LM  CW+   + RP+F  +   L+ 
Sbjct: 277 PAEVYHLMKNCWETEASFRPTFENLIPILKT 307

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  149 bits (379), Expect = 7e-45
 Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    +T +SDVWS+G
Sbjct: 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 234

Query: 102 VTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           + LWE+ +L    PY G+  D +  + I            + +P+     + D+M  CW 
Sbjct: 235 IFLWELFSLGS-SPYPGMPVDSKFYKMIKEGF-------RMLSPEHAPAEMYDIMKTCWD 286

Query: 160 RSPTERPSFTEIHLFLQR 177
             P +RP+F +I   +++
Sbjct: 287 ADPLKRPTFKQIVQLIEK 304

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  150 bits (380), Expect = 1e-44
 Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 11/139 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTS--LPIRWMAWESVRLRKFTTKSDVWS 99
           NC++ +KF +K++DF    DM+  ++  VH+ T   LP++WMA ES++ +KFTTKSDVWS
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 281

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECW 158
           FGV LWE++      PY  +   ++   +       G    L  P+   D L ++M +CW
Sbjct: 282 FGVLLWELMTRGA-PPYPDVNTFDITVYL-----LQGR--RLLQPEYCPDPLYEVMLKCW 333

Query: 159 KRSPTERPSFTEIHLFLQR 177
                 RPSF+E+   +  
Sbjct: 334 HPKAEMRPSFSELVSRISA 352

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  148 bits (375), Expect = 2e-44
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+FG
Sbjct: 141 NCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 199

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI       PY G+   +V E +   +        +  P+   + + +LM  CW+ 
Sbjct: 200 VLLWEIATYGM-SPYPGIDLSQVYELLEKDY-------RMERPEGCPEKVYELMRACWQW 251

Query: 161 SPTERPSFTEIHLFLQR 177
           +P++RPSF EIH   + 
Sbjct: 252 NPSDRPSFAEIHQAFET 268

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  147 bits (373), Expect = 2e-44
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 10/136 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLV +   +K+SDF     +    Y      T  P++W A E     K+++KSDVW+FG
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVLDDQYVS-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + +WE+ +L +  PY+  T+ EV+  +       G    L  P    D +  +M  CW  
Sbjct: 193 ILMWEVFSLGK-MPYDLYTNSEVVLKV-----SQGH--RLYRPHLASDTIYQIMYSCWHE 244

Query: 161 SPTERPSFTEIHLFLQ 176
            P +RP+F ++   ++
Sbjct: 245 LPEKRPTFQQLLSSIE 260

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  148 bits (376), Expect = 2e-44
 Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 16/139 (11%)

Query: 42  NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
           N LVG+ +  KI+DF  +   +      Y       LP+RWMA ES+    +TT SDVWS
Sbjct: 172 NILVGENYVAKIADFGLSRGQE-----VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 226

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECW 158
           +GV LWEI++L    PY G+T  E+ E +   +        L  P    D + DLM +CW
Sbjct: 227 YGVLLWEIVSLGG-TPYCGMTCAELYEKLPQGY-------RLEKPLNCDDEVYDLMRQCW 278

Query: 159 KRSPTERPSFTEIHLFLQR 177
           +  P ERPSF +I + L R
Sbjct: 279 REKPYERPSFAQILVSLNR 297

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  149 bits (379), Expect = 2e-44
 Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLV +K  +KISDF    +     Y        +P++W A E++   +++++SDVWSFG
Sbjct: 243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFG 302

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + LWE  +L    PY  L++ +  E +     + G    LP P+   D +  LM +CW  
Sbjct: 303 ILLWETFSLGA-SPYPNLSNQQTREFV-----EKGG--RLPCPELCPDAVFRLMEQCWAY 354

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RPSF+ I+  LQ 
Sbjct: 355 EPGQRPSFSTIYQELQS 371

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  148 bits (376), Expect = 2e-44
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+    +++++DF     +   D   ++     PI+WMA ES+   K+T +SDVWS+G
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG 204

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
           VT+WE++      PY GL   EV + +     + GE   L  PQ  T D+  +M +CW  
Sbjct: 205 VTVWELMTFGA-EPYAGLRLAEVPDLL-----EKGE--RLAQPQICTIDVYMVMVKCWMI 256

Query: 161 SPTERPSFTEIHLFLQR 177
               RP+F E+     R
Sbjct: 257 DENIRPTFKELANEFTR 273

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  146 bits (372), Expect = 3e-44
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLV  +  +K+SDF     +   +Y      +  P+RW   E +   KF++KSD+W+FG
Sbjct: 150 NCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V +WEI +L +  PYE  T+ E  E+I       G    L  P    + +  +M  CW  
Sbjct: 209 VLMWEIYSLGK-MPYERFTNSETAEHI-----AQGL--RLYRPHLASEKVYTIMYSCWHE 260

Query: 161 SPTERPSFTEIHLFLQR 177
              ERP+F  +   +  
Sbjct: 261 KADERPTFKILLSNILD 277

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  148 bits (375), Expect = 4e-44
 Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+      KI DF    D+ +   Y V  N  LP++WMA ES+    +T +SDVWS+G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253

Query: 102 VTLWEILNLARHRPYEG-LTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWK 159
           + LWEI +L  + PY G L + +  + +   +        +  P    K+I  +M  CW 
Sbjct: 254 ILLWEIFSLGLN-PYPGILVNSKFYKLVKDGY-------QMAQPAFAPKNIYSIMQACWA 305

Query: 160 RSPTERPSFTEIHLFLQR 177
             PT RP+F +I  FLQ 
Sbjct: 306 LEPTHRPTFQQICSFLQE 323

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  146 bits (370), Expect = 5e-44
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   IK+SDF   +     D Y     T  P++W + E     ++++KSDVWSFG
Sbjct: 134 NCLVGENQVIKVSDFGM-TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
           V +WE+ +  +  PYE  ++ EV+E+I       G    L  P+  +  +  +MN CW+ 
Sbjct: 193 VLMWEVFSEGK-IPYENRSNSEVVEDI-----STGF--RLYKPRLASTHVYQIMNHCWRE 244

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RP+F+ +   L  
Sbjct: 245 RPEDRPAFSRLLRQLAE 261

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  146 bits (371), Expect = 6e-44
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 16/141 (11%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N L+  +   KISDF    A  +D    +YY+   +   P++W A E +   KF++KSDV
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRAD---ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 203

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNE 156
           WSFGV +WE  +  + +PY G+   EV   +     + GE   +  P    +++ DLMN 
Sbjct: 204 WSFGVLMWEAFSYGQ-KPYRGMKGSEVTAML-----EKGE--RMGCPAGCPREMYDLMNL 255

Query: 157 CWKRSPTERPSFTEIHLFLQR 177
           CW      RP F  + L L+ 
Sbjct: 256 CWTYDVENRPGFAAVELRLRN 276

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  146 bits (370), Expect = 9e-44
 Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 28/154 (18%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N LV  + ++KI DF    A ++D    +YY V D+   P+ W A E +   KF   SDV
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIETD---KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDV 212

Query: 98  WSFGVTLWEILNLARHR-------------PYEGLTDLEVLENISHLHADDGEFIYLPTP 144
           WSFGVTL E+L                    +  +T   ++  +      +G+   LP P
Sbjct: 213 WSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL-----KEGK--RLPCP 265

Query: 145 QT-TKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
                ++  LM +CW+  P+ R SF  +    + 
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  145 bits (369), Expect = 1e-43
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 16/141 (11%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N L+  +   KISDF    A  +D     YY        P++W A E +  RKF+++SDV
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGAD---DSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNE 156
           WS+GVT+WE L+  + +PY+ +   EV+  I     + G+   +  P     ++  LM++
Sbjct: 197 WSYGVTMWEALSYGQ-KPYKKMKGPEVMAFI-----EQGK--RMECPPECPPELYALMSD 248

Query: 157 CWKRSPTERPSFTEIHLFLQR 177
           CW     +RP F  +   ++ 
Sbjct: 249 CWIYKWEDRPDFLTVEQRMRA 269

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  146 bits (371), Expect = 1e-43
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 9/137 (6%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV     +KI+DF     + + +     +   +PI+WMA ES+  R +T +SDVWS+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWKR 160
           VT+WE++     +PY+G+   E+   +     + GE   LP P   T D+  +M +CW  
Sbjct: 207 VTVWELMTFGS-KPYDGIPASEISSIL-----EKGE--RLPQPPICTIDVYMIMVKCWMI 258

Query: 161 SPTERPSFTEIHLFLQR 177
               RP F E+ +   +
Sbjct: 259 DADSRPKFRELIIEFSK 275

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  145 bits (368), Expect = 1e-43
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF     +  ++Y    +    PI+W A E++    FT KSDVWSFG
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFG 197

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L EI+   R  PY G+T+ EV++N+   +        +  P    + L  LM  CWK 
Sbjct: 198 ILLTEIVTHGR-IPYPGMTNPEVIQNLERGY-------RMVRPDNCPEELYQLMRLCWKE 249

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RP+F  +   L+ 
Sbjct: 250 RPEDRPTFDYLRSVLED 266

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  145 bits (368), Expect = 2e-43
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 29/155 (18%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N LV  +  +KI DF        D    ++++V +    PI W A ES+   KF+  SDV
Sbjct: 144 NILVENENRVKIGDFGLTKVLPQD---KEFFKVKEPGESPIFWYAPESLTESKFSVASDV 200

Query: 98  WSFGVTLWEIL--------------NLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
           WSFGV L+E+                +  +     +    ++E +      +     LP 
Sbjct: 201 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL-----KNNG--RLPR 253

Query: 144 PQT-TKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
           P     +I  +M ECW  +  +RPSF ++ L + +
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  146 bits (370), Expect = 2e-43
 Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDM-FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           N LV      K+SDF     +    D         +PIRW A E++  R F++ SDVWSF
Sbjct: 181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           GV +WE+L     RPY  +T+ +V+ ++     ++G    LP P      L  LM +CW 
Sbjct: 241 GVVMWEVLAYGE-RPYWNMTNRDVISSV-----EEGY--RLPAPMGCPHALHQLMLDCWH 292

Query: 160 RSPTERPSFTEIHLFLQR 177
           +   +RP F++I   L  
Sbjct: 293 KDRAQRPRFSQIVSVLDA 310

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  145 bits (367), Expect = 2e-43
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 9/138 (6%)

Query: 42  NCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           N L+  +  +KI DF    +   + D+Y + ++  +P  W A ES++ R F+  SD W F
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWK 159
           GVTLWE+    +  P+ GL   ++L  I      +GE   LP P+   +DI ++M +CW 
Sbjct: 211 GVTLWEMFTYGQ-EPWIGLNGSQILHKIDK----EGE--RLPRPEDCPQDIYNVMVQCWA 263

Query: 160 RSPTERPSFTEIHLFLQR 177
             P +RP+F  +  FL  
Sbjct: 264 HKPEDRPTFVALRDFLLE 281

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  145 bits (369), Expect = 3e-43
 Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 29/155 (18%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N LV  +  +KI DF        D    +YY+V +    PI W A ES+   KF+  SDV
Sbjct: 175 NILVENENRVKIGDFGLTKVLPQD---KEYYKVKEPGESPIFWYAPESLTESKFSVASDV 231

Query: 98  WSFGVTLWEILNLARHR--------------PYEGLTDLEVLENISHLHADDGEFIYLPT 143
           WSFGV L+E+                         +    ++E +      +     LP 
Sbjct: 232 WSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL-----KNNG--RLPR 284

Query: 144 PQT-TKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
           P     +I  +M ECW  +  +RPSF ++ L + +
Sbjct: 285 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  146 bits (370), Expect = 3e-43
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV     +KI DF    D+ S   Y V  N  LP++WMA ES+    +T KSDVWS+G
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG 261

Query: 102 VTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWK 159
           + LWEI +L    PY G+  D    + I +          +  P    + +  +M  CW 
Sbjct: 262 ILLWEIFSLGV-NPYPGIPVDANFYKLIQNGF-------KMDQPFYATEEIYIIMQSCWA 313

Query: 160 RSPTERPSFTEIHLFLQR 177
               +RPSF  +  FL  
Sbjct: 314 FDSRKRPSFPNLTSFLGC 331

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  143 bits (364), Expect = 5e-43
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 14/137 (10%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +    K+SDF       + +     D   LP++W A E++R +KF+TKSDVWSFG
Sbjct: 147 NVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 201

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + LWEI +  R  PY  +   +V+  +   +        +  P      + ++M  CW  
Sbjct: 202 ILLWEIYSFGR-VPYPRIPLKDVVPRVEKGY-------KMDAPDGCPPAVYEVMKNCWHL 253

Query: 161 SPTERPSFTEIHLFLQR 177
               RPSF ++   L+ 
Sbjct: 254 DAAMRPSFLQLREQLEH 270

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  142 bits (360), Expect = 8e-42
 Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFS-SDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           N LV      K+SDF     +    +         +PIRW A E++  RKFT+ SDVWSF
Sbjct: 177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWK 159
           G+ +WE++     RPY  L++ EV++ I     +DG    LPTP      I  LM +CW+
Sbjct: 237 GIVMWEVMTYGE-RPYWELSNHEVMKAI-----NDGF--RLPTPMDCPSAIYQLMMQCWQ 288

Query: 160 RSPTERPSFTEIHLFLQR 177
           +    RP F +I   L +
Sbjct: 289 QERARRPKFADIVSILDK 306

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  142 bits (361), Expect = 1e-41
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 16/141 (11%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N L+      K+SDF      + D    +         +PIRW + E++  RKFT+ SDV
Sbjct: 177 NILINSNLVCKVSDFGLGRVLEDD---PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNE 156
           WS+G+ LWE+++    RPY  +++ +V++ +     D+G    LP P      L  LM +
Sbjct: 234 WSYGIVLWEVMSYGE-RPYWEMSNQDVIKAV-----DEGY--RLPPPMDCPAALYQLMLD 285

Query: 157 CWKRSPTERPSFTEIHLFLQR 177
           CW++    RP F +I   L +
Sbjct: 286 CWQKDRNNRPKFEQIVSILDK 306

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  144 bits (364), Expect = 1e-41
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 14/137 (10%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV +    K+SDF       + +     D   LP++W A E++R +KF+TKSDVWSFG
Sbjct: 319 NVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 373

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + LWEI +  R  PY  +   +V+  +   +        +  P      + D+M  CW  
Sbjct: 374 ILLWEIYSFGR-VPYPRIPLKDVVPRVEKGY-------KMDAPDGCPPAVYDVMKNCWHL 425

Query: 161 SPTERPSFTEIHLFLQR 177
               RP+F ++   L+ 
Sbjct: 426 DAATRPTFLQLREQLEH 442

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  145 bits (367), Expect = 5e-41
 Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV     +K+ DF     M  S YY+      LPI+WMA ES+  R+FT+ SDVW FG
Sbjct: 521 NVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFG 579

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ-TTKDILDLMNECWKR 160
           V +WEIL     +P++G+ + +V+  I     ++GE   LP P      +  LM +CW  
Sbjct: 580 VCMWEILMHGV-KPFQGVKNNDVIGRI-----ENGE--RLPMPPNCPPTLYSLMTKCWAY 631

Query: 161 SPTERPSFTEIHLFLQR 177
            P+ RP FTE+   L  
Sbjct: 632 DPSRRPRFTELKAQLST 648

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  139 bits (352), Expect = 9e-41
 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 42  NCLVGKKFEIKISDFA-TDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           N LV  +  +KI+DF          DYY V +    PI W A ES+    F+ +SDVWSF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-------LPTPQT-TKDILD 152
           GV L+E+      +      +   +             +        LP P     ++ +
Sbjct: 217 GVVLYELFTYCD-KSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHE 275

Query: 153 LMNECWKRSPTERPSFTEIHLFLQR 177
           LM  CW  SP +RPSF+ +   L  
Sbjct: 276 LMKLCWAPSPQDRPSFSALGPQLDM 300

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  141 bits (358), Expect = 1e-40
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LV      KI+DF     +  ++Y    +    PI+W A E++    FT KSDVWSFG
Sbjct: 314 NILVSASLVCKIADFGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           + L EI+   R  PY G+++ EV+  +   +        +P P+   + L ++M  CWK 
Sbjct: 373 ILLMEIVTYGR-IPYPGMSNPEVIRALERGY-------RMPRPENCPEELYNIMMRCWKN 424

Query: 161 SPTERPSFTEIHLFLQR 177
            P ERP+F  I   L  
Sbjct: 425 RPEERPTFEYIQSVLDD 441

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  140 bits (355), Expect = 6e-40
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           NCLVG+   +K++DF   S + + D Y  H     PI+W A ES+   KF+ KSDVW+FG
Sbjct: 348 NCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 406

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL-DLMNECWKR 160
           V LWEI       PY G+   +V E +   +        +  P+   + + +LM  CW+ 
Sbjct: 407 VLLWEIATYGM-SPYPGIDLSQVYELLEKDY-------RMERPEGCPEKVYELMRACWQW 458

Query: 161 SPTERPSFTEIHLFLQR 177
           +P++RPSF EIH   + 
Sbjct: 459 NPSDRPSFAEIHQAFET 475

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score =  137 bits (347), Expect = 8e-40
 Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 10/138 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N L+ +K  +KI DF    D++    Y    +  LP++WMA E++  R +T +SDVWSFG
Sbjct: 223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 282

Query: 102 VTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECWK 159
           V LWEI +L    PY G+  D E    +      +G    +  P   T ++   M +CW 
Sbjct: 283 VLLWEIFSLGA-SPYPGVKIDEEFCRRL-----KEGT--RMRAPDYTTPEMYQTMLDCWH 334

Query: 160 RSPTERPSFTEIHLFLQR 177
             P++RP+F+E+   L  
Sbjct: 335 GEPSQRPTFSELVEHLGN 352

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  141 bits (357), Expect = 9e-40
 Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 16/141 (11%)

Query: 42  NCLVGKKFEIKISDF----ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDV 97
           N L+  +   KISDF    A  +D     YY        P++W A E +  RKF+++SDV
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGAD---DSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 522

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNE 156
           WS+GVT+WE L+  + +PY+ +   EV+  I     + G+   +  P     ++  LM++
Sbjct: 523 WSYGVTMWEALSYGQ-KPYKKMKGPEVMAFI-----EQGK--RMECPPECPPELYALMSD 574

Query: 157 CWKRSPTERPSFTEIHLFLQR 177
           CW     +RP F  +   ++ 
Sbjct: 575 CWIYKWEDRPDFLTVEQRMRA 595

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  135 bits (341), Expect = 1e-39
 Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 41  KNCLVGKKFE--------IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-LRKF 91
           KN L+ ++ +        IK+SD      +   D  +        I W+  E +   +  
Sbjct: 142 KNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE------RIPWVPPECIENPKNL 195

Query: 92  TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL 151
              +D WSFG TLWEI +    +P   L     L+       +D     LP P+   ++ 
Sbjct: 196 NLATDKWSFGTTLWEICSGGD-KPLSALDSQRKLQFY-----EDRH--QLPAPKAA-ELA 246

Query: 152 DLMNECWKRSPTERPSFTEIHLFLQR 177
           +L+N C    P  RPSF  I   L  
Sbjct: 247 NLINNCMDYEPDHRPSFRAIIRDLNS 272

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  137 bits (347), Expect = 5e-39
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF     +  ++Y         PI+W A E+    +FT KSDVWSFG
Sbjct: 310 NILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
           + L E+    R  PY G+ + EVL+ +   +        +P P    + + DLM +CW++
Sbjct: 369 ILLTELTTKGR-VPYPGMVNREVLDQVERGY-------RMPCPPECPESLHDLMCQCWRK 420

Query: 161 SPTERPSFTEIHLFLQR 177
            P ERP+F  +  FL+ 
Sbjct: 421 EPEERPTFEYLQAFLED 437

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  138 bits (348), Expect = 9e-39
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           N LVG+    K++DF     +  ++Y         PI+W A E+    +FT KSDVWSFG
Sbjct: 393 NILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNECWKR 160
           + L E+    R  PY G+ + EVL+ +   +        +P P    + + DLM +CW++
Sbjct: 452 ILLTELTTKGR-VPYPGMVNREVLDQVERGY-------RMPCPPECPESLHDLMCQCWRK 503

Query: 161 SPTERPSFTEIHLFLQR 177
            P ERP+F  +  FL+ 
Sbjct: 504 EPEERPTFEYLQAFLED 520

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  107 bits (270), Expect = 4e-29
 Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 31/150 (20%)

Query: 41  KNCLVGKKFE--------IKISDFATDSDMFSSDYYRVHDNTSL-----PIRWMAWESVR 87
            N L+ +K E        +KI+DF            R    T+         WMA E +R
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLA---------REWHRTTKMSAAGAYAWMAPEVIR 187

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
              F+  SDVWS+GV LWE+  L    P+ G+  L V   ++         + LP P T 
Sbjct: 188 ASMFSKGSDVWSYGVLLWEL--LTGEVPFRGIDGLAVAYGVAMNK------LALPIPSTC 239

Query: 148 -KDILDLMNECWKRSPTERPSFTEIHLFLQ 176
            +    LM +CW   P  RPSFT I   L 
Sbjct: 240 PEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  107 bits (269), Expect = 8e-29
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 8/141 (5%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR---KFTTKSDV 97
            N  + +   +KI DF   ++          +  S  I WMA E +R++    ++ +SDV
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMNE 156
           ++FG+ L+E+  +    PY  + + + +  I  +                 K +  LM E
Sbjct: 209 YAFGIVLYEL--MTGQLPYSNINNRDQI--IEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264

Query: 157 CWKRSPTERPSFTEIHLFLQR 177
           C K+   ERPSF  I   ++ 
Sbjct: 265 CLKKKRDERPSFPRILAEIEE 285

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  106 bits (267), Expect = 2e-28
 Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 20/149 (13%)

Query: 41  KNCLVGKKFEIKISDF-----ATDSDMFSSDYYRVHDNTSLPI-------RWMAWESVRL 88
            NCLV +   + ++DF       D          +                WMA E +  
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT- 147
           R +  K DV+SFG+ L EI  + R           +         +   F+    P    
Sbjct: 197 RSYDEKVDVFSFGIVLCEI--IGRVNADPDYLPRTMD-----FGLNVRGFLDRYCPPNCP 249

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQ 176
                +   C    P +RPSF ++  +L+
Sbjct: 250 PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  104 bits (262), Expect = 1e-27
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 13/142 (9%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           + K  N LV KK+ +K+ DF   S + +S +         P  WMA E +R      KSD
Sbjct: 164 NLKSPNLLVDKKYTVKVCDFGL-SRLKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEKSD 221

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDILDLMN 155
           V+SFGV LWE+      +P+  L   +V+  +            L  P+     +  ++ 
Sbjct: 222 VYSFGVILWEL--ATLQQPWGNLNPAQVVAAVGFKC------KRLEIPRNLNPQVAAIIE 273

Query: 156 ECWKRSPTERPSFTEIHLFLQR 177
            CW   P +RPSF  I   L+ 
Sbjct: 274 GCWTNEPWKRPSFATIMDLLRP 295

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 99.6 bits (249), Expect = 5e-26
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 21/142 (14%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRK---FTTKS 95
           ++ ++ +    +IS           D      +        W+A E+++ +        +
Sbjct: 142 RSVMIDEDMTARISMA---------DVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSA 192

Query: 96  DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN 155
           D+WSF V LWE++   R  P+  L+++E+   +    A +G    +P P  +  +  LM 
Sbjct: 193 DMWSFAVLLWELV--TREVPFADLSNMEIGMKV----ALEGLRPTIP-PGISPHVSKLMK 245

Query: 156 ECWKRSPTERPSFTEIHLFLQR 177
            C    P +RP F  I   L++
Sbjct: 246 ICMNEDPAKRPKFDMIVPILEK 267

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  100 bits (250), Expect = 7e-26
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 20/149 (13%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP---IRWMAWESVRLRK------- 90
           KN       ++ I+DF   S        R  D   +    +  +A E +R          
Sbjct: 159 KNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDK 217

Query: 91  --FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
             F+  SDV++ G   +E+   AR  P++      ++  +       G    L      K
Sbjct: 218 LPFSKHSDVFALGTIWYELH--AREWPFKTQPAEAIIWQMGT-----GMKPNLSQIGMGK 270

Query: 149 DILDLMNECWKRSPTERPSFTEIHLFLQR 177
           +I D++  CW     ERP+FT++   L++
Sbjct: 271 EISDILLFCWAFEQEERPTFTKLMDMLEK 299

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 94.3 bits (235), Expect = 7e-24
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 29/153 (18%)

Query: 39  DFK--NCLVGKKFE-----IKISDFATDSDMFSSDYYRVHDNTSL----PIRWMAWE--S 85
           D +  N  +    E      K++DF            +   ++        +WMA E   
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGLS---------QQSVHSVSGLLGNFQWMAPETIG 199

Query: 86  VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ 145
                +T K+D +SF + L+ IL      P++  +  +    I  ++    E +    P+
Sbjct: 200 AEEESYTEKADTYSFAMILYTIL--TGEGPFDEYSYGK----IKFINMIREEGLRPTIPE 253

Query: 146 TT-KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
                + +++  CW   P +RP F+ I   L  
Sbjct: 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 90.9 bits (226), Expect = 2e-22
 Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 24/147 (16%)

Query: 39  DFK--NCLVGKKFE-IKISDFATDSDMFSSDYYRVHDNTSLP----IRWMAWESVRLRKF 91
           D K  N L+      +KI DF T                         WMA E      +
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA---------CDIQTHMTNNKGSAAWMAPEVFEGSNY 180

Query: 92  TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT-KDI 150
           + K DV+S+G+ LWE+  + R +P++ +               +G     P  +   K I
Sbjct: 181 SEKCDVFSWGIILWEV--ITRRKPFDEIGGPAF---RIMWAVHNGT--RPPLIKNLPKPI 233

Query: 151 LDLMNECWKRSPTERPSFTEIHLFLQR 177
             LM  CW + P++RPS  EI   +  
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 80.5 bits (199), Expect = 1e-18
 Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 29/179 (16%)

Query: 27  HSSLKKKCIKI----FDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI-- 78
           H+ +     K      D K  N LV K     I+D    +  F SD   V    +  +  
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVKFISDTNEVDIPPNTRVGT 209

Query: 79  -RWMAWE------SVRLRKFTTKSDVWSFGVTLWEILNLARHR--------PYEGLTDLE 123
            R+M  E      +    +    +D++SFG+ LWE+               PY  L   +
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269

Query: 124 V-LENISHLHADDGEFIYLP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              E++  +          P    + +  + +  LM ECW  +P  R +   +   L +
Sbjct: 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 79.3 bits (196), Expect = 3e-18
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 41/171 (23%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI-----------RWMAWE- 84
           D K  N LV K  +  I+D        +     +H  ++  +           R+MA E 
Sbjct: 138 DLKSKNILVKKNGQCCIADLG-----LA----VMHSQSTNQLDVGNNPRVGTKRYMAPEV 188

Query: 85  -----SVRLRKFTTKSDVWSFGVTLWEILNLARHR--------PYEGLTDLEV-LENISH 130
                 V       + D+W+FG+ LWE+               P+  +   +   E++  
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRK 248

Query: 131 LHADDGEFIYLP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
           +   D +   +P    +  T   +  LM ECW ++P+ R +   I   L +
Sbjct: 249 VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 77.9 bits (192), Expect = 1e-17
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 39/167 (23%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI-----------RWMAWE----- 84
           KN LV K     I+D        +      HD+ +  I           R+MA E     
Sbjct: 176 KNILVKKNGTCCIADLG-----LA----VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226

Query: 85  -SVRLRKFTTKSDVWSFGVTLWEILNLAR--------HRPYEGLTDLEV-LENISHLHAD 134
            +++  +   ++D+++ G+  WEI               PY  L   +  +E +  +  +
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286

Query: 135 DGEFIYLP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
                 +P    + +  + +  +M ECW  +   R +   I   L +
Sbjct: 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 71.7 bits (176), Expect = 2e-15
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 31/164 (18%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI---RWMAWESVR-----L 88
           D K  N L+       I+DF   +  F +   +   +T   +   R+MA E +       
Sbjct: 156 DIKSKNVLLKNNLTACIADFGL-ALKFEAG--KSAGDTHGQVGTRRYMAPEVLEGAINFQ 212

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL------------ENISHLHADDG 136
           R    + D+++ G+ LWE+ +  R    +G  D  +L            E++  +     
Sbjct: 213 RDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKK 270

Query: 137 EFIYLP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
           +   L            + + + ECW      R S   +   + 
Sbjct: 271 KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 70.6 bits (173), Expect = 5e-15
 Identities = 27/189 (14%), Positives = 52/189 (27%), Gaps = 40/189 (21%)

Query: 20  RNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP-- 77
             K  + H  L  +        N LV       ISDF   S   + +             
Sbjct: 136 HYKPAISHRDLNSR--------NVLVKNDGTCVISDFGL-SMRLTGNRLVRPGEEDNAAI 186

Query: 78  -----IRWMAWE-------SVRLRKFTTKSDVWSFGVTLWEILN-LARHRPYEGLTDLEV 124
                IR+MA E                + D+++ G+  WEI        P E + + ++
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246

Query: 125 -LENISHLHADDGEFI---------------YLPTPQTTKDILDLMNECWKRSPTERPSF 168
             +     H    +                 +       + + + + +CW +    R + 
Sbjct: 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306

Query: 169 TEIHLFLQR 177
                 +  
Sbjct: 307 QXAEERMAE 315

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 62.0 bits (151), Expect = 5e-12
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 34/161 (21%)

Query: 39  DFK--NCLVGKKFEIKISDF------ATDSDMFSSD----YYRVHDNTSLPIRWMAWESV 86
           D K  N  + K   +++ DF       +  ++  +     YY            ++ E  
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY------------LSPEIC 197

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
             + +  KSD+W+ G  L+E+  L     +E  +   ++  I       G F  +     
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTL--KHAFEAGSMKNLVLKIIS-----GSFPPVS-LHY 249

Query: 147 TKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP 185
           + D+  L+++ +KR+P +RPS   I    F+ ++   ++ P
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSP 290

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 13/145 (8%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           D K  N  +     +K+ D       FSS     H     P  +M+ E +    +  KSD
Sbjct: 161 DIKPANVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPY-YMSPERIHENGYNFKSD 218

Query: 97  VWSFGVTLWEILNLARHRPYEG--LTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLM 154
           +WS G  L+E+  L    P+ G  +    + + I        ++  LP+   ++++  L+
Sbjct: 219 IWSLGCLLYEMAAL--QSPFYGDKMNLYSLCKKIEQ-----CDYPPLPSDHYSEELRQLV 271

Query: 155 NECWKRSPTERPSFTEIHLFLQRKN 179
           N C    P +RP  T ++   +R +
Sbjct: 272 NMCINPDPEKRPDVTYVYDVAKRMH 296

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 18/148 (12%)

Query: 33  KCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFT 92
           KC  IF     + G    +KI D    +   +S    V         +MA E     K+ 
Sbjct: 158 KCDNIF-----ITGPTGSVKIGDLGLATLKRASFAKAVIGT----PEFMAPEMYE-EKYD 207

Query: 93  TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD 152
              DV++FG+ + E+       PY    +   +          G            ++ +
Sbjct: 208 ESVDVYAFGMCMLEMATS--EYPYSECQNAAQIYRR----VTSGVKPASFDKVAIPEVKE 261

Query: 153 LMNECWKRSPTERPSFTEI--HLFLQRK 178
           ++  C +++  ER S  ++  H F Q +
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAFFQEE 289

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 34/153 (22%)

Query: 39  DFK--NCLVGKKFEIKISDF------ATDSDMFSSD----YYRVHDNTSLPIRWMAWESV 86
           D K  N  +  K  +K+ DF        D+    +     YY            M+ E +
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY------------MSPEQM 188

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
               +  KSD+WS G  L+E+  L    P+   +  E+   I       G+F  +P  + 
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCAL--MPPFTAFSQKELAGKIRE-----GKFRRIP-YRY 240

Query: 147 TKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           + ++ +++          RPS  EI  +  +  
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 59.4 bits (144), Expect = 5e-11
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 51  IKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLR-----------KFTTKSDV 97
           +K+ DF   ++    D   V  ++ +     +M  E+++             K + KSDV
Sbjct: 193 LKLIDFGI-ANQMQPDTTSVVKDSQVGAVN-YMPPEAIKDMSSSRENGKSKSKISPKSDV 250

Query: 98  WSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           WS G  L+ +       P++ + + +  L  I     D    I  P     KD+ D++  
Sbjct: 251 WSLGCILYYM--TYGKTPFQQIINQISKLHAI----IDPNHEIEFP-DIPEKDLQDVLKC 303

Query: 157 CWKRSPTERPSFTEI--HLFLQRK 178
           C KR P +R S  E+  H ++Q +
Sbjct: 304 CLKRDPKQRISIPELLAHPYVQIQ 327

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 51  IKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLR-----------KFTTKSDV 97
           +K+ DF   ++    D   V  ++ +     +M  E+++             K + KSDV
Sbjct: 146 LKLIDFGI-ANQMQPDTTSVVKDSQVGTVN-YMPPEAIKDMSSSRENGKSKSKISPKSDV 203

Query: 98  WSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           WS G  L+ +       P++ + + +  L  I     D    I  P     KD+ D++  
Sbjct: 204 WSLGCILYYM--TYGKTPFQQIINQISKLHAI----IDPNHEIEFP-DIPEKDLQDVLKC 256

Query: 157 CWKRSPTERPSFTEI--HLFLQRK 178
           C KR P +R S  E+  H ++Q +
Sbjct: 257 CLKRDPKQRISIPELLAHPYVQIQ 280

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           D K  N  +G +   K+ DF    ++ ++    V +      R+MA E ++   + T +D
Sbjct: 182 DVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP---RYMAPELLQ-GSYGTAAD 237

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           V+S G+T+ E+       P+ G       E    L    G      T   + ++  ++  
Sbjct: 238 VFSLGLTILEVAC-NMELPHGG-------EGWQQLR--QGYLPPEFTAGLSSELRSVLVM 287

Query: 157 CWKRSPTERPSFTEI--HLFLQR 177
             +  P  R +   +     L++
Sbjct: 288 MLEPDPKLRATAEALLALPVLRQ 310

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 51  IKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLR-----------KFTTKSDV 97
           +K+ DF   ++    D   V  ++ +     +M  E+++             K + KSDV
Sbjct: 165 LKLIDFGI-ANQMQPDTTSVVKDSQVGTVN-YMPPEAIKDMSSSRENGKSKSKISPKSDV 222

Query: 98  WSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           WS G  L+ +       P++ + + +  L  I     D    I  P     KD+ D++  
Sbjct: 223 WSLGCILYYM--TYGKTPFQQIINQISKLHAI----IDPNHEIEFP-DIPEKDLQDVLKC 275

Query: 157 CWKRSPTERPSFTEI--HLFLQRK 178
           C KR P +R S  E+  H ++Q +
Sbjct: 276 CLKRDPKQRISIPELLAHPYVQIQ 299

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTK 94
           D K  N  +    ++KI DF        +D  R     S     R+M+ E +  + +  +
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGL-VTSLKNDGKR---TRSKGTL-RYMSPEQISSQDYGKE 201

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLM 154
            D+++ G+ L E+L++     +E     +   ++            +      K    L+
Sbjct: 202 VDLYALGLILAELLHVCDT-AFET---SKFFTDLRD--------GIIS-DIFDKKEKTLL 248

Query: 155 NECWKRSPTERPSFTEI--HLFLQRK 178
            +   + P +RP+ +EI   L + +K
Sbjct: 249 QKLLSKKPEDRPNTSEILRTLTVWKK 274

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 56.3 bits (136), Expect = 6e-10
 Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 18/153 (11%)

Query: 39  DFK--NCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIR----WMAWESVRLRKF 91
           D K  N L+        + DF   +     D       T   I      MA E V  +  
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGH-ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233

Query: 92  TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDI 150
             K D+WS    +  +LN     P+       +   I+              P +     
Sbjct: 234 DAKVDIWSSCCMMLHMLN--GCHPWTQYFRGPLCLKIASEPP-----PIREIPPSCAPLT 286

Query: 151 LDLMNECWKRSPTERPSFTEI--HLFLQRKNLG 181
              + E  ++ P  R S  E+   +    + +G
Sbjct: 287 AQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR-WMAWE----SVRLRKF 91
           D K  N L+    ++K+ DF     +       V  +     + +MA E     +  + +
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVDD----VAKDIDAGCKPYMAPERINPELNQKGY 190

Query: 92  TTKSDVWSFGVTLWEILNLARHR-PYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKD 149
           + KSD+WS G+T+ E   LA  R PY+   T  + L+ +            LP  + + +
Sbjct: 191 SVKSDIWSLGITMIE---LAILRFPYDSWGTPFQQLKQVVE-----EPSPQLPADKFSAE 242

Query: 150 ILDLMNECWKRSPTERPSFTEI--HLFLQR 177
            +D  ++C K++  ERP++ E+  H F   
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 23/151 (15%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE-----SVRLRKF 91
           D K  N L+ ++ +IK+ DF     +            +    +MA E           +
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA---YMAPERIDPPDPTKPDY 206

Query: 92  TTKSDVWSFGVTLWEILNLARHR-PYEGL-TDLEVLENISHLHADDGEFIYLPTPQT-TK 148
             ++DVWS G++L E   LA  + PY+   TD EVL  +        E   LP     + 
Sbjct: 207 DIRADVWSLGISLVE---LATGQFPYKNCKTDFEVLTKVLQ-----EEPPLLPGHMGFSG 258

Query: 149 DILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           D    + +C  +   +RP + ++  H F++R
Sbjct: 259 DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE----SVRLRKFT 92
           D K  N L+ +   IK+ DF     +  S              +MA E    S   + + 
Sbjct: 151 DIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP---YMAPERIDPSASRQGYD 207

Query: 93  TKSDVWSFGVTLWEILNLARHR-PYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDI 150
            +SDVWS G+TL+E   LA  R PY    +  + L  +  +  D  +       + +   
Sbjct: 208 VRSDVWSLGITLYE---LATGRFPYPKWNSVFDQLTQV--VKGDPPQLSNSEEREFSPSF 262

Query: 151 LDLMNECWKRSPTERPSFTEI--HLFLQR 177
           ++ +N C  +  ++RP + E+  H F+  
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFILM 291

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 24/164 (14%)

Query: 39  DFK--NCLVGKKFEIKISDF--AT--DSDMFSSDYYRVHDNTSLPIR------WMAWESV 86
           D K  N        +K+ DF   T  D D             +          +M+ E +
Sbjct: 143 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
               ++ K D++S G+ L+E+L    +     +  +  L ++      + +F  L   Q 
Sbjct: 203 HGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVR-----NLKFPPLF-TQK 252

Query: 147 TKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPMNS 188
                 ++ +    SP ERP    I  +   +  +      +  
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKTVLRQ 296

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 50.4 bits (121), Expect = 6e-08
 Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 28/160 (17%)

Query: 39  DFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIR----------WMAWE 84
           D K  N  + +   +KI DF  A +             N                ++A E
Sbjct: 141 DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200

Query: 85  SVRLRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT 143
            +        K D++S G+  +E++    +    G+  + +L+ +           + P 
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMI----YPFSTGMERVNILKKLRS-----VSIEFPPD 251

Query: 144 --PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN 179
                 K    ++       P +RP    +    +L  K+
Sbjct: 252 FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 50.4 bits (120), Expect = 6e-08
 Identities = 15/154 (9%), Positives = 32/154 (20%), Gaps = 29/154 (18%)

Query: 39  DFK--NCLVGKKFEIKISDF-------ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR 89
            F   N  +     + + D                   Y               E +   
Sbjct: 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTY------------APREFLNAS 266

Query: 90  K--FTTKSDVWSFGVTLWEILNLARHRPYEGLTD--LEVLENISHLHADDGEFIYLPTPQ 145
              FT   + W  G++++ +       P+  +T       +  S          +     
Sbjct: 267 TATFTHALNAWQLGLSIYRV--WCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTP 324

Query: 146 TTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               +  L+          R    E        +
Sbjct: 325 LPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR--------WMAWESV-R 87
           D K  N L+G+   ++I+DF       S+      D T   +R        WMA E + +
Sbjct: 146 DVKAGNILLGEDGSVQIADFG-----VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA---DDGEFIYLPTP 144
           +R +  K+D+WSFG+T  E+       PY     ++VL           + G        
Sbjct: 201 VRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 258

Query: 145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           +  K    +++ C ++ P +RP+  E+  H F Q+
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 35/154 (22%)

Query: 39  DFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIR------WMAWESVRL 88
           D K  N L+ + F  KISDF  A  S+ F          T +  R      +MA E++R 
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKF--------AQTVMTSRIVGTTAYMAPEALR- 208

Query: 89  RKFTTKSDVWSFGVTLWEIL----NLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
            + T KSD++SFGV L EI+     +  HR  + L     L+    +  ++         
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-----LDIKEEIEDEEKTIEDYIDK 263

Query: 145 ----QTTKDILDLMN---ECWKRSPTERPSFTEI 171
                 +  +  + +   +C      +RP   ++
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 26/150 (17%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTK 94
           D K  N L+ +  E+K++DF     +  +   R   NT +  P  WMA E ++   + +K
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR---NTFVGTP-FWMAPEVIKQSAYDSK 199

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP----QTTKDI 150
           +D+WS G+T  E+       P+  L  ++VL  I               P      +K +
Sbjct: 200 ADIWSLGITAIELARG--EPPHSELHPMKVLFLIPK----------NNPPTLEGNYSKPL 247

Query: 151 LDLMNECWKRSPTERPSFTEI--HLFLQRK 178
            + +  C  + P+ RP+  E+  H F+ R 
Sbjct: 248 KEFVEACLNKEPSFRPTAKELLKHKFILRN 277

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 31/166 (18%), Positives = 52/166 (31%), Gaps = 32/166 (19%)

Query: 39  DFK--NCLVGKKFEIKISDF--------ATDSDMFSSDYYRVHD----NTSLPIRWMA-- 82
           D K  N L+  +  IK+ DF          D    +     V +    NT+    +    
Sbjct: 163 DLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM--YRTPE 220

Query: 83  -WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL 141
             +         K D+W+ G  L+ +    R  P+E    L ++          G++   
Sbjct: 221 IIDLYSNFPIGEKQDIWALGCILYLL--CFRQHPFEDGAKLRIVN---------GKYSIP 269

Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP 185
           P          L+    + +P ER S  E+   L          P 
Sbjct: 270 PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPK 315

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 24/148 (16%)

Query: 39  DFK--NCLVGKKFEIKISDF---------ATDSDMFSSDYYRVHDNTSLPIRWMA---WE 84
           D K  N L+G + +  + D             S    +         ++   + A   + 
Sbjct: 159 DLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS--YRAPELFS 216

Query: 85  SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENISHLHADDGEFIYLPT 143
                    ++DVWS G  L+ +  +    PY+ +    + +           +     +
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAM--MFGEGPYDMVFQKGDSVALAVQ-----NQLSIPQS 269

Query: 144 PQTTKDILDLMNECWKRSPTERPSFTEI 171
           P+ +  +  L+N      P +RP    +
Sbjct: 270 PRHSSALWQLLNSMMTVDPHQRPHIPLL 297

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 47.5 bits (113), Expect = 6e-07
 Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 51/182 (28%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR-WMAWESVRLRKFTTKS 95
           D K  N LV  + EIK+ DF     +  S       N+ +  R +M+ E ++   ++ +S
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQS 211

Query: 96  DVWSFGVTLWEILNLARHR-PYEGLTDLEVLENISHLHADDGEFIY-------------- 140
           D+WS G++L E   +A  R P       E+          D                   
Sbjct: 212 DIWSMGLSLVE---MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268

Query: 141 -----------------------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFL 175
                                  LP+   + +  D +N+C  ++P ER    ++  H F+
Sbjct: 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328

Query: 176 QR 177
           +R
Sbjct: 329 KR 330

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 20/149 (13%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPI 78
           K+ + H  LK         +N L+  K +   IKI DF   S +F +   ++ +      
Sbjct: 154 KHNIVHRDLK--------PENLLLESKEKDALIKIVDFGL-SAVFENQK-KMKERLGTAY 203

Query: 79  RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF 138
            ++A E V  +K+  K DVWS GV L+ IL LA + P+ G TD E+L  +         F
Sbjct: 204 -YIAPE-VLRKKYDEKCDVWSIGVILF-IL-LAGYPPFGGQTDQEILRKVEKGKYT---F 256

Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPS 167
                   ++   DL+ +  +     R S
Sbjct: 257 DSPEWKNVSEGAKDLIKQMLQFDSQRRIS 285

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 39/182 (21%)

Query: 6   HR---PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM 62
           HR   P   N+    L+   N   H  +K     I DF  C   KK  +    F+  S +
Sbjct: 141 HRDLKPH--NI----LISMPN--AHGKIK---AMISDFGLC---KKLAVGRHSFSRRSGV 186

Query: 63  FSSDYYRVHDNTSLPIRWMAWESVR---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGL 119
             ++             W+A E +        T   D++S G   + +++   H P+   
Sbjct: 187 PGTEG------------WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH-PFGKS 233

Query: 120 TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
              +    +     D       P         +L+ +     P +RPS   +  H F   
Sbjct: 234 LQRQANILLGACSLDCLH----PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289

Query: 178 KN 179
             
Sbjct: 290 LE 291

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 32/139 (23%)

Query: 42  NCLVGKKFE---IKISDFATDSDMFSSD----------YYRVHDNTSLPIRWMAWESVRL 88
           N L+  K     IKI DF   S  FS D          YY            +A E V  
Sbjct: 176 NILLENKNSLLNIKIVDFGL-SSFFSKDYKLRDRLGTAYY------------IAPE-VLK 221

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
           +K+  K DVWS GV ++ IL L  + P+ G  D ++++ +         F +      + 
Sbjct: 222 KKYNEKCDVWSCGVIMY-IL-LCGYPPFGGQNDQDIIKKVEKGKYY---FDFNDWKNISD 276

Query: 149 DILDLMNECWKRSPTERPS 167
           +  +L+         +R +
Sbjct: 277 EAKELIKLMLTYDYNKRCT 295

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 38/158 (24%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDF---------ATDSDMFSSDYYR 69
           KN + H  LK         +N L+  K +   I+I DF             D   + YY 
Sbjct: 144 KNKIVHRDLK--------PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY- 194

Query: 70  VHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENIS 129
                      +A E V    +  K DVWS GV L+ IL L+   P+ G  + ++L+ + 
Sbjct: 195 -----------IAPE-VLHGTYDEKCDVWSTGVILY-IL-LSGCPPFNGANEYDILKKVE 240

Query: 130 HLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS 167
                   F      + ++   DL+ +     P+ R S
Sbjct: 241 KGKYT---FELPQWKKVSESAKDLIRKMLTYVPSMRIS 275

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 24/152 (15%)

Query: 39  DFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIR--------WMAWESV 86
           D K  N        +K+ DF   T  D    +   +    +            +M+ E +
Sbjct: 189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI 248

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
               ++ K D++S G+ L+E+L    +     +  + ++ ++      + +F  L T Q 
Sbjct: 249 HGNNYSHKVDIFSLGLILFELL----YSFSTQMERVRIITDV-----RNLKFPLLFT-QK 298

Query: 147 TKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
                 ++ +    SPTERP  T+I  +   +
Sbjct: 299 YPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 16/103 (15%)

Query: 79  RWMAWESVRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHA-DDG 136
           R++A E ++       K+D+++  +T+      A   P        +  N    H    G
Sbjct: 195 RFLANEVLQENYTHLPKADIFALALTVVC---AAGAEP--------LPRNGDQWHEIRQG 243

Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               +P    +++  +L+       P  RPS   +  H  L  
Sbjct: 244 RLPRIP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.4 bits (105), Expect = 6e-06
 Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 16/145 (11%)

Query: 47  KKFEIKISDFATDSDMFSSDYYRVHDNTSLPI---RWMAWE-------SVRLRKFTTKSD 96
           +   I ISDF        S       N + P     W A E           R+ T   D
Sbjct: 163 ENLRILISDFGL-CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID 221

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           ++S G   + IL+  +H P+      E   NI        E   L       +  DL+++
Sbjct: 222 IFSMGCVFYYILSKGKH-PFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQ 278

Query: 157 CWKRSPTERPSFTEI--HLFLQRKN 179
                P +RP+  ++  H     K+
Sbjct: 279 MIDHDPLKRPTAMKVLRHPLFWPKS 303

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 44.3 bits (105), Expect = 7e-06
 Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 28/151 (18%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTK 94
           D K  + L+     +K+SDF   + +      R    + +  P  WMA E +    + T+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KSLVGTPY-WMAPEVISRSLYATE 221

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP------QTTK 148
            D+WS G+ + E+++     PY   + ++ ++ +             P P      + + 
Sbjct: 222 VDIWSLGIMVIEMVDG--EPPYFSDSPVQAMKRLRD----------SPPPKLKNSHKVSP 269

Query: 149 DILDLMNECWKRSPTERPSFTEI--HLFLQR 177
            + D +     R P ER +  E+  H FL +
Sbjct: 270 VLRDFLERMLVRDPQERATAQELLDHPFLLQ 300

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 32/139 (23%)

Query: 42  NCLVGKKFE---IKISDFATDSDMFSSD----------YYRVHDNTSLPIRWMAWESVRL 88
           N L+  K +   IKI DF   S  F  +          YY            +A E V  
Sbjct: 151 NILLESKEKDCDIKIIDFGL-STCFQQNTKMKDRIGTAYY------------IAPE-VLR 196

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
             +  K DVWS GV L+ IL L+   P+ G  + ++L+ +         F        + 
Sbjct: 197 GTYDEKCDVWSAGVILY-IL-LSGTPPFYGKNEYDILKRVETGKYA---FDLPQWRTISD 251

Query: 149 DILDLMNECWKRSPTERPS 167
           D  DL+ +     P+ R +
Sbjct: 252 DAKDLIRKMLTFHPSLRIT 270

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 28/151 (18%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTK 94
           D K  N L+G    +K++DF   + +      R   +T +  P  WMA E V  + +  K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPY-WMAPEVVTRKAYGPK 196

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP------QTTK 148
            D+WS G+   E++      PY     L  L  I+             TP      + + 
Sbjct: 197 VDIWSLGIMAIEMIE--GEPPYLNENPLRALYLIAT----------NGTPELQNPEKLSA 244

Query: 149 DILDLMNECWKRSPTERPSFTEI--HLFLQR 177
              D +N C +    +R S  E+  H FL+ 
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 44.3 bits (105), Expect = 7e-06
 Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 28/151 (18%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFTTK 94
           D K  N L+  +   K++DF     +  +   R   NT +  P  WMA E ++   +   
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPF-WMAPEVIQEIGYNCV 205

Query: 95  SDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT------TK 148
           +D+WS G+T  E+       PY  +  +  +  I             P P        + 
Sbjct: 206 ADIWSLGITAIEMAE--GKPPYADIHPMRAIFMIPT----------NPPPTFRKPELWSD 253

Query: 149 DILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           +  D + +C  +SP +R + T++  H F++ 
Sbjct: 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 16/141 (11%), Positives = 39/141 (27%), Gaps = 23/141 (16%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRK-----F 91
             +  + ++ ++  + ++ F        +           P    A   +   +      
Sbjct: 236 YLRPVDIVLDQRGGVFLTGFEH-LVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLM 294

Query: 92  TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDIL 151
           T   D W+ G+ ++ I       P      L   E I     +         PQ  + +L
Sbjct: 295 TFAFDTWTLGLAIYWI--WCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALL 344

Query: 152 D-LMNECWKRSPTERPSFTEI 171
           +  +         +R    + 
Sbjct: 345 EGFLR----YPKEDRLLPLQA 361

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 16/151 (10%), Positives = 43/151 (28%), Gaps = 28/151 (18%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTS--------LPIRWMAWESVRL 88
             +  + ++ ++  + ++ F     +       V   +              +++   R 
Sbjct: 231 YLRPVDIVLDQRGGVFLTGF---EHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRR 287

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
              T   D W+ G+ ++ I       P      L   E I     +         PQ  +
Sbjct: 288 TLMTFSFDAWALGLVIYWI--WCADLPITKDAALGGSEWIFRSCKN--------IPQPVR 337

Query: 149 DILDLMNECWKRSPTERPSFTEI--HLFLQR 177
            +L+      +    +R    +       ++
Sbjct: 338 ALLEGF---LRYPKEDRLLPLQAMETPEYEQ 365

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 24/83 (28%)

Query: 39  DFK--NCLVGKKFEIKISDF-----ATDSDMFSSDYYRVHDNTSLPIR------WMAWES 85
           D K  N L+ + F  KI+DF      T+ D       + H +T           ++  E 
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELD-------QTHLST----VVKGTLGYIDPEY 212

Query: 86  VRLRKFTTKSDVWSFGVTLWEIL 108
               + T KSDV+SFGV L+E+L
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVL 235

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 33/156 (21%)

Query: 39  DFK--NCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLP------IRWMAWESVRLR 89
           D K  N L+      +KISDF T          R+             +++MA E +   
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSK--------RLAGINPCTETFTGTLQYMAPEIIDKG 198

Query: 90  K--FTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPT--P 144
              +   +D+WS G T+ E+       P+  L +    +  +             P    
Sbjct: 199 PRGYGKAADIWSLGCTIIEMAT--GKPPFYELGEPQAAMFKVGMFKV-------HPEIPE 249

Query: 145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK 178
             + +    + +C++  P +R    ++    FL+  
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS 285

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 32/155 (20%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFT-- 92
           D K  N L+ +  E+K+ DF   + +  +   R   NT +  P  WMA E +   +    
Sbjct: 154 DIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR---NTFIGTP-YWMAPEVIACDENPDA 209

Query: 93  ---TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP----- 144
               KSD+WS G+T  E+       P   +  +  L  I             P P     
Sbjct: 210 TYDFKSDLWSLGITAIEMAEG--APPLCDMHPMRALFLIPR----------NPAPRLKSK 257

Query: 145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           + +K     +  C  ++ ++RP+  ++  H F++ 
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 12/103 (11%)

Query: 80  WMAWESVRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           WMA E +       +  K DVWS G+T  E+       P   +  +  L +I+   +   
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAER--KPPLFNMNAMSALYHIAQNESPA- 272

Query: 137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               L +   ++   + ++ C ++ P +RP+   +  H F+ R
Sbjct: 273 ----LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 19/80 (23%)

Query: 39  DFK--NCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIR------WMAWESVRL 88
           D K  N L+ ++FE  + DF  A   D         + +T +          +A E +  
Sbjct: 159 DVKAANILLDEEFEAVVGDFGLAKLMD---------YKDTHVTTAVRGTIGHIAPEYLST 209

Query: 89  RKFTTKSDVWSFGVTLWEIL 108
            K + K+DV+ +GV L E++
Sbjct: 210 GKSSEKTDVFGYGVMLLELI 229

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 33/159 (20%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW--------MAWESVRL 88
           D K  N L+G K E+KI+DF      +S     VH  +    R         +  E +  
Sbjct: 139 DIKPENLLMGYKGELKIADFG-----WS-----VHAPSLR--RRTMCGTLDYLPPEMIEG 186

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
           +    K D+W  GV  +E   L    P++  +  E    I +      +  + P P  + 
Sbjct: 187 KTHDEKVDLWCAGVLCYEF--LVGMPPFDSPSHTETHRRIVN-----VDLKF-P-PFLSD 237

Query: 149 DILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP 185
              DL+++  +  P +R     +  H +++  +   +PP
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPP 276

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIR---WMAWESVR--LR 89
             K  + L+    ++ +S   ++  M S    +  VHD     ++   W++ E ++  L+
Sbjct: 153 SVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ 212

Query: 90  KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI 128
            +  KSD++S G+T  E+ N   H P++ +   ++L   
Sbjct: 213 GYDAKSDIYSVGITACELANG--HVPFKDMPATQMLLEK 249

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 32/133 (24%)

Query: 50  EIKISDFATDSDMFSSD----------YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWS 99
            IKI DF   +++F SD           Y            MA E V  R  T K D+WS
Sbjct: 165 PIKIIDFGL-AELFKSDEHSTNAAGTALY------------MAPE-VFKRDVTFKCDIWS 210

Query: 100 FGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT-TKDILDLMNECW 158
            GV ++  L L    P+ G +  EV +  ++      E  Y    +  T   +DL+ +  
Sbjct: 211 AGVVMY-FL-LTGCLPFTGTSLEEVQQKATY-----KEPNYAVECRPLTPQAVDLLKQML 263

Query: 159 KRSPTERPSFTEI 171
            + P  RPS  ++
Sbjct: 264 TKDPERRPSAAQV 276

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 38.7 bits (90), Expect = 6e-04
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 26/126 (20%)

Query: 51  IKISDF---------ATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
           +K+ DF          +      +  +             A E    +     +D+WS G
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTTGTAEF------------AAPEVAEGKPVGYYTDMWSVG 343

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           V  + IL L+   P+ G  D E L N+     +            ++D  D + +     
Sbjct: 344 VLSY-IL-LSGLSPFGGENDDETLRNVKSCDWN---MDDSAFSGISEDGKDFIRKLLLAD 398

Query: 162 PTERPS 167
           P  R +
Sbjct: 399 PNTRMT 404

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 21/141 (14%)

Query: 50  EIKISDFATDSDMFSSDYYRVHDNTSLPIR-------WMAWESVRL--RKFTTKSDVWSF 100
           EIK+ DF       S ++Y++++     +        ++A E +      +  K D WS 
Sbjct: 208 EIKLVDFG-----LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV L  +L L    P+ G+ D + +  +  L+     F        +    DL++    R
Sbjct: 263 GVLLH-LL-LMGAVPFPGVNDADTISQV--LNKKL-CFENPNYNVLSPLARDLLSNLLNR 317

Query: 161 SPTERPSFTEI--HLFLQRKN 179
           +  ER        H ++ + +
Sbjct: 318 NVDERFDAMRALQHPWISQFS 338

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 33/156 (21%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIRWMAWESVRLRKFT-- 92
           D K  N L+  + +I+++DF   +    +   R   ++ +  P  WMA E V        
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR---DSFIGTPY-WMAPEVVMCETMKDT 197

Query: 93  ---TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP----- 144
               K+D+WS G+TL E+       P+  L  + VL  I+              P     
Sbjct: 198 PYDYKADIWSLGITLIEMAQ--IEPPHHELNPMRVLLKIAK----------SDPPTLLTP 245

Query: 145 -QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
            + + +  D +     ++P  RPS  ++  H F+  
Sbjct: 246 SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 38/163 (23%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW---------MAWESVR 87
           D K  N L+G   E+KI+DF      +S     VH  +S   R          +  E + 
Sbjct: 134 DIKPENLLLGSAGELKIADFG-----WS-----VHAPSS---RRTDLCGTLDYLPPEMIE 180

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            R    K D+WS GV  +E   L    P+E  T  E  + IS       EF + P    T
Sbjct: 181 GRMHDEKVDLWSLGVLCYEF--LVGKPPFEANTYQETYKRISR-----VEFTF-P-DFVT 231

Query: 148 KDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPMNS 188
           +   DL++   K +P++RP   E+  H ++         P N 
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWITA---NSSKPSNC 271

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	188
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.98
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.98
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.98
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.98
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.98
3niz_A	311	Rhodanese family protein; structural genomics, str	99.98
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.98
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.98
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.97
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.95
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.95
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.89
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.77
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.5
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.2
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.85
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.26
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.63
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.16
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.81
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.38
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	94.64
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.86
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	93.76
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	92.86
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	92.11
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	91.49
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	91.26
3ats_A	357	Putative uncharacterized protein; hypothetical pro	91.03
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.24
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	90.12
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	88.81
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	88.73
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	88.29
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	88.09
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	85.76
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	85.17
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	84.9
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	84.87
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	84.06
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	82.32
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	80.92

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.6e-40  Score=248.00  Aligned_cols=157  Identities=34%  Similarity=0.623  Sum_probs=134.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||+++|+||||||        .|||++.++.+||+|||+++...............||+.|+|||++.
T Consensus       149 ~i~~qia~gl~yLH~~~iiHRDLK~--------~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  220 (308)
T 4gt4_A          149 HLVAQIAAGMEYLSSHHVVHKDLAT--------RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM  220 (308)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCccc--------cceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh
Confidence            4678999999999999999999999        99999999999999999998775544444445667899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|||||||++||++| .|..||.+....++...+.....     . .....++.++.+++.+||+.||++|||
T Consensus       221 ~~~~s~ksDVwSfGvvl~El~t-~g~~Pf~~~~~~~~~~~i~~~~~-----~-~~p~~~~~~~~~li~~C~~~dP~~RPs  293 (308)
T 4gt4_A          221 YGKFSIDSDIWSYGVVLWEVFS-YGLQPYCGYSNQDVVEMIRNRQV-----L-PCPDDCPAWVYALMIECWNEFPSRRPR  293 (308)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TTCCTTTTCCHHHHHHHHHTTCC-----C-CCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCccchhhhHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC-----C-CCcccchHHHHHHHHHHcCCChhHCcC
Confidence            9999999999999999999996 36789999988888777754321     1 123467889999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      ++||+..|+...
T Consensus       294 ~~ei~~~L~a~~  305 (308)
T 4gt4_A          294 FKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHHhcc
Confidence            999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.7e-40  Score=244.94  Aligned_cols=165  Identities=20%  Similarity=0.299  Sum_probs=125.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||+++|+||||||        .|||++.++.+||+|||+|+...............||+.|||||++
T Consensus       135 ~~i~~qia~gL~yLH~~~IiHRDlKp--------~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l  206 (307)
T 3omv_A          135 IDIARQTAQGMDYLHAKNIIHRDMKS--------NNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI  206 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCSCCCS--------SSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCccCCccCH--------HHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHh
Confidence            34678999999999999999999999        9999999999999999999876543333344556799999999999


Q ss_pred             hcC---CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          87 RLR---KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        87 ~~~---~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+.   .++.++|||||||++|||+|  |..||.+.................+.. ......++.++.+++.+||+.||+
T Consensus       207 ~~~~~~~y~~ksDVwS~Gvvl~Ellt--g~~Pf~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~li~~cl~~dP~  283 (307)
T 3omv_A          207 RMQDNNPFSFQSDVYSYGIVLYELMT--GELPYSHINNRDQIIFMVGRGYASPDL-SKLYKNCPKAMKRLVADCVKKVKE  283 (307)
T ss_dssp             HCCSSCCCCHHHHHHHHHHHHHHHHH--SSCTTTTCCCHHHHHHHHHTTCCCCCS-TTSCTTSCHHHHHHHHHHTCSSST
T ss_pred             hccCCCCCCcHHHhHhHHHHHHHHHH--CCCCCCCCChHHHHHHHHhcCCCCCCc-ccccccchHHHHHHHHHHcCCCHh
Confidence            743   48889999999999999995  679998876554444333221111111 122346788999999999999999


Q ss_pred             CCCCHHHHHHHHHhccCCC
Q psy4332         164 ERPSFTEIHLFLQRKNLGY  182 (188)
Q Consensus       164 ~Rps~~el~~~l~~~~~~~  182 (188)
                      +|||+.|++..|+.++...
T Consensus       284 ~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          284 ERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             TSCCHHHHHHHHHHHHTTC
T ss_pred             HCcCHHHHHHHHHHHhccC
Confidence            9999999999888876554

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.3e-40  Score=247.63  Aligned_cols=159  Identities=39%  Similarity=0.692  Sum_probs=135.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||+++|+||||||        +|||++.++.+||+|||+++...............||+.|+|||.+
T Consensus       131 ~~i~~qia~gl~yLH~~~iiHRDlKp--------~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~  202 (299)
T 4asz_A          131 LHIAQQIAAGMVYLASQHFVHRDLAT--------RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI  202 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCccCH--------hhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHH
Confidence            34678999999999999999999999        9999999999999999999876544433344455689999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|||||||++|||+| .|..||.+....++...+.....     . ..+..+++++.+++.+||+.||++||
T Consensus       203 ~~~~~~~k~DVwS~Gvvl~Ellt-~G~~Pf~~~~~~~~~~~i~~~~~-----~-~~p~~~~~~~~~li~~cl~~dP~~RP  275 (299)
T 4asz_A          203 MYRKFTTESDVWSLGVVLWEIFT-YGKQPWYQLSNNEVIECITQGRV-----L-QRPRTCPQEVYELMLGCWQREPHMRK  275 (299)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TTCCTTTTSCHHHHHHHHHHTCC-----C-CCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHcCCC-----C-CCCccchHHHHHHHHHHcCCChhHCc
Confidence            99999999999999999999995 26899999988888877765321     1 12246788999999999999999999


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      |+++++++|+++.+
T Consensus       276 s~~~i~~~L~~~~~  289 (299)
T 4asz_A          276 NIKGIHTLLQNLAK  289 (299)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh
Confidence            99999999998754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=245.03  Aligned_cols=159  Identities=38%  Similarity=0.677  Sum_probs=126.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||+++|+||||||        .|||++.++.+||+|||+++...............||+.|+|||++
T Consensus       161 ~~i~~qia~gl~yLH~~~iiHRDLKp--------~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~  232 (329)
T 4aoj_A          161 LAVASQVAAGMVYLAGLHFVHRDLAT--------RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI  232 (329)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEETTTEEEECCCC----------------CCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeecccccH--------hhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhh
Confidence            35678999999999999999999999        9999999999999999999877554444444566789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|||||||++|||+| .|..||.+....+....+....     .. ..+..+++++.+++.+||+.||++||
T Consensus       233 ~~~~~~~~sDvwS~Gvvl~Ellt-~G~~Pf~~~~~~~~~~~i~~g~-----~~-~~p~~~~~~~~~li~~cl~~dP~~RP  305 (329)
T 4aoj_A          233 LYRKFTTESDVWSFGVVLWEIFT-YGKQPWYQLSNTEAIDCITQGR-----EL-ERPRACPPEVYAIMRGCWQREPQQRH  305 (329)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHT-TSCCTTCSSCHHHHHHHHHHTC-----CC-CCCTTCCHHHHHHHHHHCCSSTTTSC
T ss_pred             cCCCCCccccccchHHHHHHHHc-CCCCCCCCCCHHHHHHHHHcCC-----CC-CCcccccHHHHHHHHHHcCcChhHCc
Confidence            99999999999999999999995 2689999998888877776432     11 12246788999999999999999999


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      |++||++.|+.+.+
T Consensus       306 s~~ei~~~L~~l~~  319 (329)
T 4aoj_A          306 SIKDVHARLQALAQ  319 (329)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhh
Confidence            99999999998854

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.2e-39  Score=245.73  Aligned_cols=156  Identities=19%  Similarity=0.282  Sum_probs=131.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.......  ......||+.|+|||++.
T Consensus       174 ~~~~qi~~aL~ylH~~~IiHRDlKp--------~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~  243 (346)
T 4fih_A          174 AVCLAVLQALSVLHAQGVIHRDIKS--------DSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELIS  243 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCH--------HHEEECCCCCEEEecCcCceecCCCCC--cccccccCcCcCCHHHHC
Confidence            4567899999999999999999999        999999999999999999987754332  334667999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|||+  +|..||.+.+..+....+.....    ........+++++.+|+.+||+.||++|||
T Consensus       244 ~~~y~~~~DiWSlGvilyeml--~G~~PF~~~~~~~~~~~i~~~~~----~~~~~~~~~s~~~~dli~~~L~~dP~~R~t  317 (346)
T 4fih_A          244 RLPYGPEVDIWSLGIMVIEMV--DGEPPYFNEPPLKAMKMIRDNLP----PRLKNLHKVSPSLKGFLDRLLVRDPAQRAT  317 (346)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSSC----CCCSCGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--HCCCCCCCcCHHHHHHHHHcCCC----CCCCccccCCHHHHHHHHHHcCCChhHCcC
Confidence            888999999999999999999  56899999888887777654321    111122456889999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      ++|+  |+||++..
T Consensus       318 a~e~l~Hp~~~~~~  331 (346)
T 4fih_A          318 AAELLKHPFLAKAG  331 (346)
T ss_dssp             HHHHTTCGGGGGCC
T ss_pred             HHHHhcCHhhcCCC
Confidence            9999  89998753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=8.2e-40  Score=243.41  Aligned_cols=154  Identities=18%  Similarity=0.277  Sum_probs=131.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.+.............||+.|+|||++.
T Consensus       136 ~~~~qi~~al~ylH~~~IiHRDlKP--------eNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~  207 (311)
T 4aw0_A          136 FYTAEIVSALEYLHGKGIIHRDLKP--------ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT  207 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCH--------HHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHc
Confidence            4567899999999999999999999        99999999999999999998875444333445678999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|+|+  +|..||.+.+..++..++......       ....+++++.+|+.+||+.||++|||
T Consensus       208 ~~~y~~~~DiWSlGvilyeml--~G~~PF~~~~~~~~~~~i~~~~~~-------~p~~~s~~~~dli~~lL~~dp~~R~t  278 (311)
T 4aw0_A          208 EKSACKSSDLWALGCIIYQLV--AGLPPFRAGNEGLIFAKIIKLEYD-------FPEKFFPKARDLVEKLLVLDATKRLG  278 (311)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCC-------CCTTCCHHHHHHHHHHSCSSGGGSTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCCCC-------CCcccCHHHHHHHHHHccCCHhHCcC
Confidence            989999999999999999999  568999998888888887654321       12457889999999999999999999


Q ss_pred             HHHH--------HHHHHhc
Q psy4332         168 FTEI--------HLFLQRK  178 (188)
Q Consensus       168 ~~el--------~~~l~~~  178 (188)
                      ++|+        |+||+.+
T Consensus       279 ~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          279 CEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             SGGGTCHHHHHTSGGGTTC
T ss_pred             hHHHcCCHHHHCCCCcCCC
Confidence            9984        6788765

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.4e-39  Score=245.64  Aligned_cols=156  Identities=30%  Similarity=0.522  Sum_probs=128.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||+++|+||||||        .|||++.++.+||+|||+++.......+.......+|+.|||||++.
T Consensus       189 ~~~~qia~gl~yLH~~~iiHRDLK~--------~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  260 (353)
T 4ase_A          189 CYSFQVAKGMEFLASRKCIHRDLAA--------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  260 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHhHhhCCeecCccCc--------cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh
Confidence            3567899999999999999999999        99999999999999999998776554444445566889999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..++.++|||||||++|||+| .|..||.+... ......+....     ... ....+++++.+++.+||+.||++||
T Consensus       261 ~~~y~~ksDVwS~Gv~l~El~t-~G~~Pf~~~~~~~~~~~~i~~g~-----~~~-~p~~~~~~~~~li~~c~~~dP~~RP  333 (353)
T 4ase_A          261 DRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDEEFCRRLKEGT-----RMR-APDYTTPEMYQTMLDCWHGEPSQRP  333 (353)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTT-TSCCSSTTCCCSHHHHHHHHHTC-----CCC-CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCcccEeehHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHcCC-----CCC-CCccCCHHHHHHHHHHcCcChhHCc
Confidence            9999999999999999999996 36899988753 33443343221     111 2245688999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      |++|+++.|+++
T Consensus       334 t~~eil~~L~~l  345 (353)
T 4ase_A          334 TFSELVEHLGNL  345 (353)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998888765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.4e-39  Score=238.79  Aligned_cols=152  Identities=25%  Similarity=0.347  Sum_probs=127.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++......  .......||+.|+|||++.
T Consensus       130 ~~~~qi~~aL~ylH~~~IiHRDlKp--------~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~  199 (304)
T 3ubd_A          130 FYLAELALALDHLHSLGIIYRDLKP--------ENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVN  199 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCCG--------GGEEECTTSCEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCH--------HHeEEcCCCCEEecccccceeccCCC--ccccccccCcccCCHHHhc
Confidence            4567899999999999999999999        99999999999999999998654332  2334567999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|+|+  +|..||.+.+..++...+.....       .....+++++.+++.+||+.||++|||
T Consensus       200 ~~~y~~~~DiwSlGvilyeml--tG~~PF~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~t  270 (304)
T 3ubd_A          200 RRGHTQSADWWSFGVLMFEML--TGTLPFQGKDRKETMTMILKAKL-------GMPQFLSPEAQSLLRMLFKRNPANRLG  270 (304)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             cCCCCCCCcccchHHHHHHHH--hCCCCCCCcCHHHHHHHHHcCCC-------CCCCcCCHHHHHHHHHHcccCHHHCCC
Confidence            899999999999999999999  56899999988888887765322       112457889999999999999999998


Q ss_pred             -----HHHH--HHHHHhc
Q psy4332         168 -----FTEI--HLFLQRK  178 (188)
Q Consensus       168 -----~~el--~~~l~~~  178 (188)
                           ++|+  |+||+.+
T Consensus       271 a~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          271 AGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             CSTTTHHHHHTSGGGTTC
T ss_pred             CCcCCHHHHHcCccccCC
Confidence                 4688  8899865

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.1e-39  Score=246.38  Aligned_cols=153  Identities=18%  Similarity=0.281  Sum_probs=129.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.......  ......||+.|+|||++.
T Consensus       129 ~~~~qi~~aL~ylH~~~IiHRDlKp--------~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~  198 (350)
T 4b9d_A          129 DWFVQICLALKHVHDRKILHRDIKS--------QNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICE  198 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTCEETTCCG--------GGEEECTTCCEEECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCH--------HHEEECCCCCEEEcccccceeecCCcc--cccccCCCccccCHHHHC
Confidence            3567899999999999999999999        999999999999999999987754321  223456899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|||+  +|..||.+.+..++..++.....      ......++.++.+|+.+||+.||++|||
T Consensus       199 ~~~y~~~~DiwSlGvilyeml--tG~~PF~~~~~~~~~~~i~~~~~------~~~~~~~s~~~~~li~~~L~~dP~~R~s  270 (350)
T 4b9d_A          199 NKPYNNKSDIWALGCVLYELC--TLKHAFEAGSMKNLVLKIISGSF------PPVSLHYSYDLRSLVSQLFKRNPRDRPS  270 (350)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--HCCCCCCCcCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHHHccCChhHCcC
Confidence            889999999999999999999  56899999988888877765432      1223467889999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      ++|+  |+||++-
T Consensus       271 ~~e~l~hp~~~~~  283 (350)
T 4b9d_A          271 VNSILEKGFIAKR  283 (350)
T ss_dssp             HHHHHTSHHHHTT
T ss_pred             HHHHhcCHHhhcC
Confidence            9999  7888754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.7e-39  Score=246.29  Aligned_cols=156  Identities=19%  Similarity=0.282  Sum_probs=131.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|||++||+||||||        +|||++.+|.+||+|||+++.+.....  ......||+.|||||++.
T Consensus       251 ~~~~qil~aL~ylH~~~IiHRDiKp--------~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~  320 (423)
T 4fie_A          251 AVCLAVLQALSVLHAQGVIHRDIKS--------DSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELIS  320 (423)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCST--------TTEEECTTCCEEECCCTTCEECCSSCC--CBCCCEECTTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeecccCCH--------HHEEEcCCCCEEEecCccceECCCCCc--cccccccCcCcCCHHHHC
Confidence            4567899999999999999999999        999999999999999999987754332  334667999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|||+  +|..||.+....+....+.....    ........++.++.+|+.+||+.||++|||
T Consensus       321 ~~~y~~~~DiWSlGvilyeml--~G~~PF~~~~~~~~~~~i~~~~~----~~~~~~~~~s~~~~dli~~~L~~dP~~R~t  394 (423)
T 4fie_A          321 RLPYGPEVDIWSLGIMVIEMV--DGEPPYFNEPPLKAMKMIRDNLP----PRLKNLHKVSPSLKGFLDRLLVRDPAQRAT  394 (423)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSCC----CCCSCTTSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--HCCCCCCCcCHHHHHHHHHcCCC----CCCcccccCCHHHHHHHHHHcCCChhHCcC
Confidence            888999999999999999999  56899999988887777654321    111223467899999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      ++|+  |+||++..
T Consensus       395 a~ell~Hp~~~~~~  408 (423)
T 4fie_A          395 AAELLKHPFLAKAG  408 (423)
T ss_dssp             HHHHTTCGGGGGCC
T ss_pred             HHHHhcCHHhcCCC
Confidence            9999  88998753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.1e-38  Score=234.26  Aligned_cols=150  Identities=21%  Similarity=0.286  Sum_probs=118.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......   ......||+.|+|||++.
T Consensus       116 ~~~~qi~~al~ylH~~~IiHRDiKP--------~NILl~~~~~vkl~DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~  184 (275)
T 3hyh_A          116 RFFQQIISAVEYCHRHKIVHRDLKP--------ENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVIS  184 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCT--------TTEEECTTCCEEECCSSCC------------------CTTSCHHHHS
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCh--------HHeEECCCCCEEEeecCCCeecCCCC---ccCCeeECcccCChhhhc
Confidence            4567899999999999999999999        99999999999999999997664432   234567999999999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..+ +.++||||+||++|+|+  +|..||.+.+..+....+......       .+...++++.+++.+||+.||++||
T Consensus       185 ~~~y~~~~~DiwSlGvily~ll--tg~~PF~~~~~~~~~~~i~~~~~~-------~p~~~s~~~~~li~~~L~~dP~~R~  255 (275)
T 3hyh_A          185 GKLYAGPEVDVWSCGVILYVML--CRRLPFDDESIPVLFKNISNGVYT-------LPKFLSPGAAGLIKRMLIVNPLNRI  255 (275)
T ss_dssp             SSSCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCC-------CCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCCCCCChhhhHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHcCCCC-------CCCCCCHHHHHHHHHHccCChhHCc
Confidence            7775 57999999999999999  567999998877777776643221       1245688999999999999999999


Q ss_pred             CHHHH--HHHHHh
Q psy4332         167 SFTEI--HLFLQR  177 (188)
Q Consensus       167 s~~el--~~~l~~  177 (188)
                      |++|+  |+||+.
T Consensus       256 s~~eil~hpw~k~  268 (275)
T 3hyh_A          256 SIHEIMQDDWFKV  268 (275)
T ss_dssp             CHHHHHHCHHHHT
T ss_pred             CHHHHHcCccccc
Confidence            99999  889974

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.3e-38  Score=232.77  Aligned_cols=150  Identities=17%  Similarity=0.255  Sum_probs=118.8

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|+++  |+||||||        +|||++. ++.+||+|||+++.....    ......||+.|+|||
T Consensus       133 ~~~~qi~~aL~ylH~~~~~IiHRDlKp--------~NILl~~~~g~vKl~DFGla~~~~~~----~~~~~~GTp~YmAPE  200 (290)
T 3fpq_A          133 SWCRQILKGLQFLHTRTPPIIHRDLKC--------DNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPE  200 (290)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCCCCCG--------GGEEESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGG
T ss_pred             HHHHHHHHHHHHHHHCCCCEEecccCh--------hheeEECCCCCEEEEeCcCCEeCCCC----ccCCcccCccccCHH
Confidence            45778999999999998  99999999        9999974 789999999998754322    223457999999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      ++. +.++.++||||+||++|||+  +|..||.+... ..+...+....     .........++++.+++.+||+.||+
T Consensus       201 ~~~-~~y~~~~DiwSlGvilyell--tg~~Pf~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~  272 (290)
T 3fpq_A          201 MYE-EKYDESVDVYAFGMCMLEMA--TSEYPYSECQNAAQIYRRVTSGV-----KPASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             GGG-TCCCTHHHHHHHHHHHHHHH--HSSCTTTTCSSHHHHHHHHTTTC-----CCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             HcC-CCCCcHHHHHHHHHHHHHHH--HCCCCCCCCCcHHHHHHHHHcCC-----CCCCCCccCCHHHHHHHHHHccCChh
Confidence            986 56999999999999999999  56789987654 44444443221     11112244577899999999999999


Q ss_pred             CCCCHHHH--HHHHHh
Q psy4332         164 ERPSFTEI--HLFLQR  177 (188)
Q Consensus       164 ~Rps~~el--~~~l~~  177 (188)
                      +|||++|+  |+||++
T Consensus       273 ~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          273 ERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GSCCHHHHHTSGGGC-
T ss_pred             HCcCHHHHhcCccccC
Confidence            99999999  889875

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4.7e-38  Score=236.41  Aligned_cols=155  Identities=16%  Similarity=0.117  Sum_probs=122.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCcccc---ccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYR---VHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~P   83 (188)
                      .++.+++.|+.|+|++||+||||||        +|||++.++ .+||+|||+++.........   ......||+.|+||
T Consensus       154 ~~~~qi~~aL~ylH~~~IiHRDlKp--------~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAP  225 (336)
T 4g3f_A          154 YYLGQALEGLEYLHTRRILHGDVKA--------DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP  225 (336)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCCG--------GGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHCCceecccCH--------HHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCH
Confidence            4567899999999999999999999        999999887 59999999998775432211   22345699999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |++.+..++.++||||+||++|||+  +|..||.+....++...+.....    ......+.+++++.+++.+||+.||+
T Consensus       226 E~~~~~~y~~~~DiwSlGvilyeml--tG~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~s~~~~~li~~~L~~dP~  299 (336)
T 4g3f_A          226 EVVMGKPCDAKVDIWSSCCMMLHML--NGCHPWTQYFRGPLCLKIASEPP----PIREIPPSCAPLTAQAIQEGLRKEPV  299 (336)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHH--HSSCSSTTTCCSCCHHHHHHSCC----GGGGSCTTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHCCCCCCcHHHHHHHHHHHHHHH--HCcCCCCCCCHHHHHHHHHcCCC----CchhcCccCCHHHHHHHHHHccCCHh
Confidence            9999989999999999999999999  56799988766555555554221    11122356789999999999999999


Q ss_pred             CCCCHHHHHHHHH
Q psy4332         164 ERPSFTEIHLFLQ  176 (188)
Q Consensus       164 ~Rps~~el~~~l~  176 (188)
                      +|||+.|+.+.+.
T Consensus       300 ~R~sa~el~~~l~  312 (336)
T 4g3f_A          300 HRASAMELRRKVG  312 (336)
T ss_dssp             GSCCHHHHHHHHH
T ss_pred             HCcCHHHHHHHHH
Confidence            9999999965443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-36  Score=233.78  Aligned_cols=163  Identities=23%  Similarity=0.258  Sum_probs=129.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.+......  .......||+.|+|||+
T Consensus       162 ~~~~qil~al~ylH~~~iiHRDlKP--------~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv  233 (398)
T 4b99_A          162 YFLYQLLRGLKYMHSAQVIHRDLKP--------SNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL  233 (398)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHCcCcCCCcCc--------cccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHH
Confidence            4577899999999999999999999        9999999999999999999876543211  22345679999999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc--------------C---------
Q psy4332          86 VRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY--------------L---------  141 (188)
Q Consensus        86 ~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------~---------  141 (188)
                      +.+. .++.++||||+||++|||+  +|..||.+.+..+....+............              .         
T Consensus       234 ~~~~~~~~~~~DiWSlG~il~ell--~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (398)
T 4b99_A          234 MLSLHEYTQAIDLWSVGCIFGEML--ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWE  311 (398)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHH--HTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHH
T ss_pred             hcCCCCCCChhheehhHHHHHHHH--HCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHH
Confidence            8875 4689999999999999999  567999999888877776543332221110              0         


Q ss_pred             -CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         142 -PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       142 -~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                       ..+..+.++.+|+.+||..||++|||++|+  |+||++...
T Consensus       312 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          312 TVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             HHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             HhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence             013457889999999999999999999999  899998754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.8e-36  Score=227.71  Aligned_cols=163  Identities=20%  Similarity=0.236  Sum_probs=118.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCcc------------------
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDY------------------   67 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~------------------   67 (188)
                      +..+.+|+.|+.|+|++||+||||||        +|||++.+ +.+||+|||+++.......                  
T Consensus       120 ~~~~~qll~al~ylH~~gIiHRDiKP--------eNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFGIVHRDVKP--------SNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQN  191 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC------------
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCcCCH--------HHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccc
Confidence            34567899999999999999999999        99999877 7999999999975532211                  


Q ss_pred             --------ccccCCCCCCccccchhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCC---
Q psy4332          68 --------YRVHDNTSLPIRWMAWESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHAD---  134 (188)
Q Consensus        68 --------~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~---  134 (188)
                              ........||+.|+|||++.+. .++.++||||+||++|+|+  +|..||.+. +..+....+......   
T Consensus       192 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell--~G~~Pf~~~~~~~~~l~~I~~~~G~~~~  269 (361)
T 4f9c_A          192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL--SGRYPFYKASDDLTALAQIMTIRGSRET  269 (361)
T ss_dssp             --------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH--HTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred             cccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH--HCCCCCCCCCCHHHHHHHHHHhcCCccc
Confidence                    0112345699999999999865 4889999999999999999  567888544 344433333211000   


Q ss_pred             -----------------------------------CC---------CcccCCCCCChHHHHHHHHHHhccCCCCCCCHHH
Q psy4332         135 -----------------------------------DG---------EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTE  170 (188)
Q Consensus       135 -----------------------------------~~---------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~e  170 (188)
                                                         ..         ..........++++.+|+.+||+.||++|+|++|
T Consensus       270 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~e  349 (361)
T 4f9c_A          270 IQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEE  349 (361)
T ss_dssp             HHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             hhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHH
Confidence                                               00         0000112456789999999999999999999999


Q ss_pred             H--HHHHHhcc
Q psy4332         171 I--HLFLQRKN  179 (188)
Q Consensus       171 l--~~~l~~~~  179 (188)
                      +  |+||++++
T Consensus       350 aL~Hp~f~~i~  360 (361)
T 4f9c_A          350 ALLHPFFKDMS  360 (361)
T ss_dssp             HHTSGGGTTC-
T ss_pred             HhcCcccCCCC
Confidence            9  89999875

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.4e-36  Score=226.79  Aligned_cols=166  Identities=20%  Similarity=0.207  Sum_probs=115.7

Q ss_pred             ccccchhhhhhhhccc--------ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKN--------GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~--------~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~   77 (188)
                      .++.+++.|+.|+|++        +|+||||||        .|||++.++.+||+|||+++.........  ......||
T Consensus       104 ~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp--------~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT  175 (303)
T 3hmm_A          104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS--------KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             HHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCG--------GGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CC
T ss_pred             HHHHHHHHHHHHHHHhhhhccCCCCEeeccCCc--------ccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccc
Confidence            4677899999999987        999999999        99999999999999999987664432211  12345699


Q ss_pred             ccccchhhhhcC------CCCChhhHHHHHHHHHHHHhCCC--------CCCCCCC-----CHHHHHHHhhcccCCCCCc
Q psy4332          78 IRWMAWESVRLR------KFTTKSDVWSFGVTLWEILNLAR--------HRPYEGL-----TDLEVLENISHLHADDGEF  138 (188)
Q Consensus        78 ~~~~~Pe~~~~~------~~~~~~di~slG~~~~~l~t~~~--------~~p~~~~-----~~~~~~~~~~~~~~~~~~~  138 (188)
                      +.|+|||++.+.      .++.++|||||||++|||+|+..        ..||.+.     ........+......+...
T Consensus       176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p  255 (303)
T 3hmm_A          176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP  255 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCC
Confidence            999999999754      35678999999999999997532        2233332     1122332232211111111


Q ss_pred             ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      ........+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus       256 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            1111122345788999999999999999999999999988543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.2e-36  Score=226.46  Aligned_cols=152  Identities=20%  Similarity=0.295  Sum_probs=108.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc----------ccCCCCCCc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR----------VHDNTSLPI   78 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~   78 (188)
                      ++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.........          ......||+
T Consensus       123 i~~qi~~al~ylH~~~IiHRDlKp--------~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~  194 (299)
T 4g31_A          123 IFLQIAEAVEFLHSKGLMHRDLKP--------SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTK  194 (299)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECCCCCC--------------------------CCC
T ss_pred             HHHHHHHHHHHHHHCcCccccCcH--------HHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCc
Confidence            566889999999999999999999        99999999999999999998765432111          123456999


Q ss_pred             cccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHH
Q psy4332          79 RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        79 ~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  157 (188)
                      .|+|||++.+..++.++||||+||++|||+  .   ||.+... ......+....     ... .....++...+++.+|
T Consensus       195 ~YmAPE~~~~~~y~~~~DiwSlGvilyell--~---Pf~~~~~~~~~~~~~~~~~-----~p~-~~~~~~~~~~~li~~~  263 (299)
T 4g31_A          195 LYMSPEQIHGNSYSHKVDIFSLGLILFELL--Y---PFSTQMERVRTLTDVRNLK-----FPP-LFTQKYPCEYVMVQDM  263 (299)
T ss_dssp             TTSCHHHHTTCCCCTHHHHHHHHHHHHHHH--S---CCSSHHHHHHHHHHHHTTC-----CCH-HHHHHCHHHHHHHHHH
T ss_pred             cccCHHHHcCCCCCCHHHHHHHHHHHHHHc--c---CCCCccHHHHHHHHHhcCC-----CCC-CCcccCHHHHHHHHHH
Confidence            999999999889999999999999999999  3   7765321 12222222111     000 0112245678899999


Q ss_pred             hccCCCCCCCHHHH--HHHHHhcc
Q psy4332         158 WKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       158 l~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      |+.||++|||+.|+  |+||++++
T Consensus       264 L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          264 LSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             cCCChhHCcCHHHHhcCHhhCCCC
Confidence            99999999999999  77998764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1e-34  Score=233.72  Aligned_cols=150  Identities=17%  Similarity=0.201  Sum_probs=122.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +|||++.+|.+||+|||+++.....    ......||+.|+|||++.
T Consensus       296 ~y~~qIl~aL~yLH~~gIiHRDLKP--------eNILld~~G~vKL~DFGlA~~~~~~----~~~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          296 FYAAEIILGLEHMHNRFVVYRDLKP--------ANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECSSC----CCCSCCSCGGGCCHHHHS
T ss_pred             HHHHHHHHHHHHHHHCCccccCCch--------HHeEEeCCCCEEecccceeeecCCC----CCCCccCCcCccCHHHHh
Confidence            4567899999999999999999999        9999999999999999999876543    234567999999999996


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      . ..++.++|+||+||++|||+  +|..||.+..   ..++...+....       ......++.++.+|+.+||+.||+
T Consensus       364 ~~~~y~~~vDiWSLGvilYEmL--tG~~PF~~~~~~~~~~i~~~i~~~~-------~~~p~~~S~~a~dLI~~lL~~dP~  434 (689)
T 3v5w_A          364 KGVAYDSSADWFSLGCMLFKLL--RGHSPFRQHKTKDKHEIDRMTLTMA-------VELPDSFSPELRSLLEGLLQRDVN  434 (689)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHH--HSSCTTCGGGCCCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSCGG
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHhhcCCC-------CCCCccCCHHHHHHHHHHccCCHh
Confidence            4 56899999999999999999  5679997642   233333333221       112245788999999999999999


Q ss_pred             CCCC-----HHHH--HHHHHhc
Q psy4332         164 ERPS-----FTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rps-----~~el--~~~l~~~  178 (188)
                      +|++     ++|+  |+||+.+
T Consensus       435 ~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          435 RRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             GCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HCCCCCCCCHHHHhcCccccCC
Confidence            9998     6898  9999866

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.1e-34  Score=231.11  Aligned_cols=157  Identities=20%  Similarity=0.243  Sum_probs=130.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc--ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK--FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|||++||+||||||        +|||++.+  +.+||+|||+++.+.....   .....||+.|+|||+
T Consensus       259 ~~~~qi~~al~ylH~~~iiHRDlKp--------~Nill~~~~~~~vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv  327 (573)
T 3uto_A          259 EYMRQVCKGLCHMHENNYVHLDLKP--------ENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEV  327 (573)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSSSCCCEEECCCSSCEECCTTSE---EEEECSSGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCh--------hhccccCCCCCCEEEeeccceeEccCCCc---eeeeEECccccCHHH
Confidence            3567889999999999999999999        99999854  7899999999988754432   234568999999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+||++|+|+  .|..||.+....+....+.........   .....++.++.+||.+||+.||++|
T Consensus       328 ~~~~~y~~~~DiWSlGvilyeml--~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~dli~~~L~~dp~~R  402 (573)
T 3uto_A          328 AEGKPVGYYTDMWSVGVLSYILL--SGLSPFGGENDDETLRNVKSCDWNMDD---SAFSGISEDGKDFIRKLLLADPNTR  402 (573)
T ss_dssp             HTTCCBCHHHHHHHHHHHHHHHH--HSCCSSCCSSHHHHHHHHHTTCCCCCS---GGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHH--HCCCCCCCcCHHHHHHHHHhCCCCCCc---ccccCCCHHHHHHHHHHccCChhHC
Confidence            99989999999999999999999  568999999988888877654322211   1224578899999999999999999


Q ss_pred             CCHHHH--HHHHHhccC
Q psy4332         166 PSFTEI--HLFLQRKNL  180 (188)
Q Consensus       166 ps~~el--~~~l~~~~~  180 (188)
                      |++.|+  |+||+..+.
T Consensus       403 ~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          403 MTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             CCHHHHHHSTTTSCCCC
T ss_pred             cCHHHHhcCcCcCCCCC
Confidence            999999  779886543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.98  E-value=1.9e-32  Score=209.83  Aligned_cols=155  Identities=32%  Similarity=0.569  Sum_probs=127.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++...............+++.|+|||.+.+
T Consensus       208 i~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  279 (370)
T 2psq_A          208 CTYQLARGMEYLASQKCIHRDLAA--------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  279 (370)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCeeccccch--------hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC
Confidence            467899999999999999999999        999999999999999999887654433333344556788999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||||+++|+|+| .|..||.+....+....+.....      ......++.++.+++.+||..||++||++
T Consensus       280 ~~~~~~~DvwslG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~  352 (370)
T 2psq_A          280 RVYTHQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR------MDKPANCTNELYMMMRDCWHAVPSQRPTF  352 (370)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCGGGHHHHHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCCcHHHHHHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            889999999999999999995 26889988876666655543221      11224567899999999999999999999


Q ss_pred             HHHHHHHHhc
Q psy4332         169 TEIHLFLQRK  178 (188)
Q Consensus       169 ~el~~~l~~~  178 (188)
                      .|+++.|+++
T Consensus       353 ~ell~~L~~i  362 (370)
T 2psq_A          353 KQLVEDLDRI  362 (370)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999888876

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.98  E-value=2.4e-32  Score=203.41  Aligned_cols=156  Identities=22%  Similarity=0.314  Sum_probs=126.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ......+|+.|+|||.+.
T Consensus       120 ~~~~qi~~~l~~lH~~~i~H~Dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~  189 (297)
T 3fxz_A          120 AVCRECLQALEFLHSNQVIHRDIKS--------DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVT  189 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCH--------HHEEECCCCCEEEeeCCCceecCCccc--ccCCccCCcCccChhhhc
Confidence            4567889999999999999999999        999999999999999999876644322  234556899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  +|..||.+.........+......    ........+..+.+++.+||+.||++|||
T Consensus       190 ~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps  263 (297)
T 3fxz_A          190 RKAYGPKVDIWSLGIMAIEMI--EGEPPYLNENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLEMDVEKRGS  263 (297)
T ss_dssp             CSCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHHCSC----CCSCGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCC----CCCCccccCHHHHHHHHHHccCChhHCcC
Confidence            888999999999999999999  567899888776655544332111    11122456788999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      ++|+  |+||+...
T Consensus       264 ~~ell~h~~~~~~~  277 (297)
T 3fxz_A          264 AKELLQHQFLKIAK  277 (297)
T ss_dssp             HHHHTTCGGGGGCC
T ss_pred             HHHHhhChhhcccC
Confidence            9999  78887653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.98  E-value=2e-32  Score=204.56  Aligned_cols=159  Identities=20%  Similarity=0.215  Sum_probs=124.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+|+.|+|||.+.
T Consensus       124 ~i~~qi~~al~~lH~~~ivH~Dlkp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~  192 (308)
T 3g33_A          124 DLMRQFLRGLDFLHANCIVHRDLKP--------ENILVTSGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLL  192 (308)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCT--------TTEEECTTSCEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEEcCCCCEEEeeCccccccCCCc---ccCCccccccccCchHHc
Confidence            4577899999999999999999999        99999999999999999987664332   223445788899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc--------------------CCCCCCh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY--------------------LPTPQTT  147 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~  147 (188)
                      +..++.++||||+|+++|+++  +|..||.+....+....+............                    ...+..+
T Consensus       193 ~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (308)
T 3g33_A          193 QSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEME  270 (308)
T ss_dssp             TSCCCSTHHHHHHHHHHHHTT--TSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCC
T ss_pred             CCCCCchHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCcccc
Confidence            889999999999999999999  678999988877766665432211111000                    0113567


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      +++.+++.+||+.||++|||+.|+  |+||++..
T Consensus       271 ~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          271 ESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            899999999999999999999999  78888654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.98  E-value=9.6e-33  Score=212.56  Aligned_cols=164  Identities=21%  Similarity=0.264  Sum_probs=125.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCc-------------------cc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSD-------------------YY   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~-------------------~~   68 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......                   ..
T Consensus       113 ~i~~qi~~~L~~LH~~~ivHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (388)
T 3oz6_A          113 YVVYQLIKVIKYLHSGGLLHRDMKP--------SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ  184 (388)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC----------
T ss_pred             HHHHHHHHHHHHHHhCCEEeCCCCH--------HHeEEcCCCCEEecCCccccccccccccccccccccccccccccccc
Confidence            3566899999999999999999999        99999999999999999987653211                   01


Q ss_pred             cccCCCCCCccccchhhhhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc---------
Q psy4332          69 RVHDNTSLPIRWMAWESVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF---------  138 (188)
Q Consensus        69 ~~~~~~~~~~~~~~Pe~~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------  138 (188)
                      .......+|+.|+|||.+.+ ..++.++||||+||++++++  +|..||.+.........+......+...         
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~  262 (388)
T 3oz6_A          185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL--CGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPF  262 (388)
T ss_dssp             -----CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSS
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHH
Confidence            12234568999999999986 56899999999999999999  5678999888777666654322211100         


Q ss_pred             -------------------------------ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         139 -------------------------------IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       139 -------------------------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                                                     ...+....+.++.+|+.+||..||++|||++|+  |+||+.....
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~  338 (388)
T 3oz6_A          263 AKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP  338 (388)
T ss_dssp             HHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred             HHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence                                           001122567899999999999999999999999  8998876543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.98  E-value=1.8e-32  Score=205.36  Aligned_cols=162  Identities=19%  Similarity=0.250  Sum_probs=123.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+|+.|+|||.+.
T Consensus       123 ~~~~qi~~~l~~LH~~~ivH~Dikp--------~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~  192 (311)
T 3niz_A          123 IYLYQLLRGVAHCHQHRILHRDLKP--------QNLLINSDGALKLADFGLARAFGIPV--RSYTHEVVTLWYRAPDVLM  192 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEETTSCC--C---CCCCCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCch--------HhEEECCCCCEEEccCcCceecCCCc--ccccCCcccCCcCCHHHhc
Confidence            3567899999999999999999999        99999999999999999987764332  2233456788999999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc-----------------------CCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-----------------------LPT  143 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~  143 (188)
                      + ..++.++||||+|+++|++++  |..||.+....+....+............                       ...
T Consensus       193 ~~~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (311)
T 3niz_A          193 GSKKYSTSVDIWSIGCIFAEMIT--GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSII  270 (311)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHHH--SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHS
T ss_pred             CCCCCCchHHhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhC
Confidence            6 457999999999999999995  57899876655544444322111111000                       001


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      +.++.++.+++.+||+.||++|||++|+  |+||++++.+
T Consensus       271 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  310 (311)
T 3niz_A          271 PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQ  310 (311)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCTT
T ss_pred             cccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCcc
Confidence            3456789999999999999999999999  8899987643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.98  E-value=1.3e-32  Score=209.43  Aligned_cols=152  Identities=20%  Similarity=0.286  Sum_probs=124.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|||++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+.
T Consensus       128 ~~~~qi~~aL~~LH~~givHrDlkp--------~NILl~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  197 (353)
T 3txo_A          128 FYAAEIISALMFLHDKGIIYRDLKL--------DNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQ  197 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCcccCCCH--------HHEEECCCCCEEEccccceeecccCC--ccccccCCCcCeEChhhcC
Confidence            4577899999999999999999999        99999999999999999987643322  2234556899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+|+  +|..||.+....+....+......       .....+.++.+++.+||..||++||+
T Consensus       198 ~~~~~~~~DiwslG~il~ell--~G~~Pf~~~~~~~~~~~i~~~~~~-------~p~~~~~~~~~li~~lL~~dP~~R~~  268 (353)
T 3txo_A          198 EMLYGPAVDWWAMGVLLYEML--CGHAPFEAENEDDLFEAILNDEVV-------YPTWLHEDATGILKSFMTKNPTMRLG  268 (353)
T ss_dssp             HHHCTTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             CCCcCCccCCCcchHHHHHHH--hCCCCCCCCCHHHHHHHHHcCCCC-------CCCCCCHHHHHHHHHHhhhCHHHccC
Confidence            888999999999999999999  568999999888888777653221       12346789999999999999999999


Q ss_pred             H------HHH--HHHHHhc
Q psy4332         168 F------TEI--HLFLQRK  178 (188)
Q Consensus       168 ~------~el--~~~l~~~  178 (188)
                      +      +++  |+||+.+
T Consensus       269 ~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          269 SLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             SGGGTCTHHHHTSGGGTTC
T ss_pred             CcccCCHHHHhhCCcccCC
Confidence            8      777  8888865

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.98  E-value=4.8e-32  Score=202.91  Aligned_cols=161  Identities=28%  Similarity=0.428  Sum_probs=120.0

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.++.|+|++|  |+|+||||        +||+++.++.+||+|||+++......  .......+|+.|+|||.
T Consensus       141 ~i~~qi~~aL~~LH~~~~~ivH~Dikp--------~NIll~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~  210 (309)
T 3p86_A          141 SMAYDVAKGMNYLHNRNPPIVHRNLKS--------PNLLVDKKYTVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEV  210 (309)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCTTCCG--------GGEEECTTCCEEECCCC-------------------CCTTSCHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEECCCCCh--------hhEEEeCCCcEEECCCCCCccccccc--cccccCCCCccccChhh
Confidence            35678999999999999  99999999        99999999999999999987543321  12234567889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+|+++|+++  +|..||.+....+....+......     .......+.++.+++.+||..||++|
T Consensus       211 ~~~~~~~~~~DiwslG~il~ell--tg~~Pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dP~~R  283 (309)
T 3p86_A          211 LRDEPSNEKSDVYSFGVILWELA--TLQQPWGNLNPAQVVAAVGFKCKR-----LEIPRNLNPQVAAIIEGCWTNEPWKR  283 (309)
T ss_dssp             HTTCCCCTTHHHHHHHHHHHHHH--HCCCTTTTSCHHHHHHHHHHSCCC-----CCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hcCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhcCCC-----CCCCccCCHHHHHHHHHHccCChhhC
Confidence            99888999999999999999999  457899988877766555322111     11224578899999999999999999


Q ss_pred             CCHHHHHHHHHhccCCCCCC
Q psy4332         166 PSFTEIHLFLQRKNLGYVPP  185 (188)
Q Consensus       166 ps~~el~~~l~~~~~~~~~~  185 (188)
                      ||+.++.+.|+++-....||
T Consensus       284 ps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          284 PSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             CCHHHHHHHHHHHHC-----
T ss_pred             cCHHHHHHHHHHHHHhCCCC
Confidence            99999999999886655554

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=2e-32  Score=206.35  Aligned_cols=157  Identities=27%  Similarity=0.495  Sum_probs=124.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++...............++..|+|||.+.
T Consensus       121 ~~~~qi~~~l~~LH~~~ivH~Dikp--------~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3poz_A          121 NWCVQIAKGMNYLEDRRLVHRDLAA--------RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCeeCCCCCh--------heEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhc
Confidence            3567899999999999999999999        99999999999999999987664443322333445677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||+.||++||+
T Consensus       193 ~~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps  265 (327)
T 3poz_A          193 HRIYTHQSDVWSYGVTVWELMT-FGSKPYDGIPASEISSILEKGER------LPQPPICTIDVYMIMVKCWMIDADSRPK  265 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCGGGHHHHHHTTCC------CCCCTTBCHHHHHHHHHHTCSCGGGSCC
T ss_pred             cCCCCchhhhhhhHHHHHHHHh-cCCCCccCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHHHcCCChhhCCC
Confidence            9999999999999999999995 27899988876665554443211      1123456789999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.+++..|+++.
T Consensus       266 ~~ell~~l~~~~  277 (327)
T 3poz_A          266 FRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999988887653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=4.6e-32  Score=204.56  Aligned_cols=152  Identities=20%  Similarity=0.310  Sum_probs=127.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||++.......   ......+|+.|+|||.+.
T Consensus       118 ~~~~qi~~al~~lH~~~ivHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~  186 (328)
T 3fe3_A          118 SKFRQIVSAVQYCHQKRIVHRDLKA--------ENLLLDADMNIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQ  186 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCEeccCCCH--------HHEEEcCCCCEEEeeccCceecCCCC---ccccccCCcceeCccccc
Confidence            4567899999999999999999999        99999999999999999987665433   234566899999999998


Q ss_pred             cCCCC-ChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFT-TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~-~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..+. .++||||+|+++|+++  +|..||.+....+....+......       .....+.++.+++.+||..||++||
T Consensus       187 ~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~-------~p~~~s~~~~~li~~~L~~dP~~R~  257 (328)
T 3fe3_A          187 GKKYDGPEVDVWSLGVILYTLV--SGSLPFDGQNLKELRERVLRGKYR-------IPFYMSTDCENLLKRFLVLNPIKRG  257 (328)
T ss_dssp             TCCCCSHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCC-------CCTTSCHHHHHHHHHHCCSSTTTSC
T ss_pred             CCCcCCchhhhhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCC-------CCCCCCHHHHHHHHHHCCCChhHCc
Confidence            77764 7899999999999999  568999998887777776643221       1234678999999999999999999


Q ss_pred             CHHHH--HHHHHhcc
Q psy4332         167 SFTEI--HLFLQRKN  179 (188)
Q Consensus       167 s~~el--~~~l~~~~  179 (188)
                      |++|+  |+||+...
T Consensus       258 t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          258 TLEQIMKDRWINAGH  272 (328)
T ss_dssp             CHHHHTTCTTTTTTC
T ss_pred             CHHHHhcCHhhcCCC
Confidence            99999  88988653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=5e-32  Score=205.00  Aligned_cols=152  Identities=18%  Similarity=0.234  Sum_probs=126.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+.
T Consensus       109 ~~~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  178 (337)
T 1o6l_A          109 FYGAEIVSALEYLHSRDVVYRDIKL--------ENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLE  178 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGS
T ss_pred             HHHHHHHHHHHHHHHCCeecCcCCH--------HHEEECCCCCEEEeeccchhhcccCC--CcccccccChhhCChhhhc
Confidence            3567899999999999999999999        99999999999999999987643322  1234556899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++|+||+|+++|+|+  +|..||.+.........+.....       ......+.++.+++.+||..||++|| 
T Consensus       179 ~~~~~~~~DiwslG~il~ell--~g~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~g  249 (337)
T 1o6l_A          179 DNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCCCchhhcccchhHHHHHh--cCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHhcC
Confidence            888999999999999999999  56789998887777766654221       11245688999999999999999999 


Q ss_pred             ----CHHHH--HHHHHhc
Q psy4332         167 ----SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ----s~~el--~~~l~~~  178 (188)
                          +++|+  |+||+.+
T Consensus       250 ~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          250 GGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCHHHHHcCCCcCCC
Confidence                89999  7888754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=206.43  Aligned_cols=157  Identities=32%  Similarity=0.560  Sum_probs=130.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       195 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  266 (382)
T 3tt0_A          195 SCAYQVARGMEYLASKKCIHRDLAA--------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  266 (382)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCc--------ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc
Confidence            4567899999999999999999999        99999999999999999998775543333344555778899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||.+....+....+.....      ......++.++.+++.+||+.||++||+
T Consensus       267 ~~~~~~~~DiwslG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps  339 (382)
T 3tt0_A          267 DRIYTHQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGHR------MDKPSNCTNELYMMMRDCWHAVPSQRPT  339 (382)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCHHHHHHHHHTTCC------CCCCSSCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHHHcCCChhhCcC
Confidence            8889999999999999999995 27889998887777666653321      1122457889999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      ++|+++.|+++-
T Consensus       340 ~~ell~~L~~~~  351 (382)
T 3tt0_A          340 FKQLVEDLDRIV  351 (382)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999988888763

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=4.2e-32  Score=204.43  Aligned_cols=157  Identities=28%  Similarity=0.501  Sum_probs=124.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++...............++..|+|||.+.
T Consensus       119 ~~~~qi~~~l~~lH~~~ivH~Dikp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (325)
T 3kex_A          119 NWGVQIAKGMYYLEEHGMVHRNLAA--------RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH  190 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSS--------TTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccch--------heEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhc
Confidence            3567889999999999999999999        99999999999999999998775544333334555777899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||+
T Consensus       191 ~~~~~~~~Di~slG~~l~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps  263 (325)
T 3kex_A          191 FGKYTHQSDVWSYGVTVWELMT-FGAEPYAGLRLAEVPDLLEKGER------LAQPQICTIDVYMVMVKCWMIDENIRPT  263 (325)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTSCTTHHHHHHHTTCB------CCCCTTBCTTTTHHHHHHTCSCTTTSCC
T ss_pred             cCCCChhhHhHHhHHHHHHHHh-CCCCCccccCHHHHHHHHHcCCC------CCCCCcCcHHHHHHHHHHcCCChhhCcC
Confidence            8899999999999999999994 27889988776666555543211      1112345668999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++.+.|+++.
T Consensus       264 ~~el~~~l~~~~  275 (325)
T 3kex_A          264 FKELANEFTRMA  275 (325)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH
Confidence            999999888764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.97  E-value=4.8e-32  Score=204.34  Aligned_cols=157  Identities=27%  Similarity=0.496  Sum_probs=120.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       121 ~i~~qi~~aL~~LH~~~ivH~Dikp--------~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3lzb_A          121 NWCVQIAKGMNYLEDRRLVHRDLAA--------RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCcCCCCCH--------HHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHc
Confidence            4567899999999999999999999        99999999999999999988765443333334455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .|..||.+....+....+....      ........+.++.+++.+||..||++||+
T Consensus       193 ~~~~~~~~Di~slG~il~ell~-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps  265 (327)
T 3lzb_A          193 HRIYTHQSDVWSYGVTVWELMT-FGSKPYDGIPASEISSILEKGE------RLPQPPICTIDVYMIMRKCWMIDADSRPK  265 (327)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCGGGHHHHHHTTC------CCCCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHcCC------CCCCCccCCHHHHHHHHHHcCCChhHCcC
Confidence            8899999999999999999994 2789999887666655554321      11223456789999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.|++..|+++.
T Consensus       266 ~~ell~~L~~~~  277 (327)
T 3lzb_A          266 FRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999998888764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=5e-32  Score=203.60  Aligned_cols=156  Identities=30%  Similarity=0.657  Sum_probs=120.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       141 ~i~~qi~~al~~LH~~~ivH~Dikp--------~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (323)
T 3qup_A          141 RFMVDIACGMEYLSSRNFIHRDLAA--------RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA  212 (323)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCcccCCCCc--------ceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence            4567889999999999999999999        99999999999999999988765544333334455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++|||
T Consensus       213 ~~~~~~~~Di~slG~il~ell~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps  285 (323)
T 3qup_A          213 DNLYTVHSDVWAFGVTMWEIMT-RGQTPYAGIENAEIYNYLIGGNR------LKQPPECMEEVYDLMYQCWSADPKQRPS  285 (323)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCGGGHHHHHHTTCC------CCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             CCCCCCccchhhHHHHHHHHHh-CCCCCccccChHHHHHHHhcCCC------CCCCCccCHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999995 27899998877666666543221      1223467789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++.+.|+++
T Consensus       286 ~~~l~~~l~~~  296 (323)
T 3qup_A          286 FTCLRMELENI  296 (323)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998888876

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=6.3e-32  Score=204.47  Aligned_cols=161  Identities=35%  Similarity=0.664  Sum_probs=129.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.+
T Consensus       179 i~~qi~~~l~~LH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  250 (343)
T 1luf_A          179 IARQVAAGMAYLSERKFVHRDLAT--------RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  250 (343)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCc--------ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc
Confidence            677899999999999999999999        999999999999999999876544332233345567888999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||++
T Consensus       251 ~~~~~~~Di~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~  323 (343)
T 1luf_A          251 NRYTTESDVWAYGVVLWEIFS-YGLQPYYGMAHEEVIYYVRDGNI------LACPENCPLELYNLMRLCWSKLPADRPSF  323 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT-TTCCTTTTSCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCcCcccccHHHHHHHHHHHh-cCCCcCCCCChHHHHHHHhCCCc------CCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            889999999999999999995 26789998887777666653221      11224568899999999999999999999


Q ss_pred             HHHHHHHHhccCCCCC
Q psy4332         169 TEIHLFLQRKNLGYVP  184 (188)
Q Consensus       169 ~el~~~l~~~~~~~~~  184 (188)
                      .++++.|+++.+....
T Consensus       324 ~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          324 CSIHRILQRMCERAEG  339 (343)
T ss_dssp             HHHHHHHHHTTC----
T ss_pred             HHHHHHHHHHHhhhhh
Confidence            9999999998765543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=2.3e-32  Score=209.77  Aligned_cols=158  Identities=28%  Similarity=0.481  Sum_probs=127.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++...............++..|+|||.+.
T Consensus       217 ~~~~qi~~~l~~LH~~~ivHrDlkp--------~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~  288 (377)
T 3cbl_A          217 QMVGDAAAGMEYLESKCCIHRDLAA--------RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN  288 (377)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcCCcccCH--------HHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhc
Confidence            4577889999999999999999999        99999999999999999987654332211222333567899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++||++| .|..||.+....+....+....     . ......++.++.+++.+||+.||++|||
T Consensus       289 ~~~~~~~~DvwslG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~li~~cl~~dP~~Rps  361 (377)
T 3cbl_A          289 YGRYSSESDVWSFGILLWETFS-LGASPYPNLSNQQTREFVEKGG-----R-LPCPELCPDAVFRLMEQCWAYEPGQRPS  361 (377)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHT-TSCCSSTTSCHHHHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCC-----C-CCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            8889999999999999999995 2688999988776665554321     1 1122456889999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +++++..|+++..
T Consensus       362 ~~~i~~~L~~i~~  374 (377)
T 3cbl_A          362 FSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=5.8e-32  Score=203.04  Aligned_cols=160  Identities=19%  Similarity=0.243  Sum_probs=124.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+|+.|+|||.+.+
T Consensus       113 ~~~qi~~aL~~lH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~  182 (317)
T 2pmi_A          113 FQWQLLQGLAFCHENKILHRDLKP--------QNLLINKRGQLKLGDFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMG  182 (317)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCSSCEETTSCC--CCCCCCCSCCTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHCCeeeCCCCh--------HHeEEcCCCCEEECcCccceecCCCc--ccCCCCcccccccCchHhhC
Confidence            455889999999999999999999        99999999999999999987664322  12344567889999999976


Q ss_pred             C-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc---------------------------cc
Q psy4332          89 R-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF---------------------------IY  140 (188)
Q Consensus        89 ~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~  140 (188)
                      . .++.++||||+|+++|+++  +|..||.+....+....+..........                           ..
T Consensus       183 ~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (317)
T 2pmi_A          183 SRTYSTSIDIWSCGCILAEMI--TGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQP  260 (317)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGG
T ss_pred             CCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcc
Confidence            4 5799999999999999999  4678999888766665554321111000                           00


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ......+.++.+++.+||+.||++|||++|+  |+||++...
T Consensus       261 ~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          261 HTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             GCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             cccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence            0112457889999999999999999999999  899998743

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=3.9e-32  Score=206.21  Aligned_cols=152  Identities=24%  Similarity=0.352  Sum_probs=127.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+.
T Consensus       122 ~~~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  191 (345)
T 1xjd_A          122 FYAAEIILGLQFLHSKGIVYRDLKL--------DNILLDKDGHIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILL  191 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeEeCCCCh--------hhEEECCCCCEEEeEChhhhhcccCC--CcccCCCCCcccCChhhhc
Confidence            3567899999999999999999999        99999999999999999987643222  1234567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+|+  +|..||.+....+....+.....       ......+.++.+++.+||..||++||+
T Consensus       192 ~~~~~~~~DiwslG~il~ell--~g~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dp~~R~~  262 (345)
T 1xjd_A          192 GQKYNHSVDWWSFGVLLYEML--IGQSPFHGQDEEELFHSIRMDNP-------FYPRWLEKEAKDLLVKLFVREPEKRLG  262 (345)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHSCSSGGGSBT
T ss_pred             CCCCCChhhhHHHHHHHHHHh--cCCCCCCCCCHHHHHHHHHhCCC-------CCCcccCHHHHHHHHHHhcCCHhHcCC
Confidence            888999999999999999999  56789999888777777654321       112456889999999999999999999


Q ss_pred             HH-HH--HHHHHhc
Q psy4332         168 FT-EI--HLFLQRK  178 (188)
Q Consensus       168 ~~-el--~~~l~~~  178 (188)
                      +. ++  |+||+.+
T Consensus       263 ~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          263 VRGDIRQHPLFREI  276 (345)
T ss_dssp             TBSCGGGSGGGTTC
T ss_pred             ChHHHHcCccccCC
Confidence            98 88  8888765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.1e-31  Score=199.63  Aligned_cols=152  Identities=26%  Similarity=0.353  Sum_probs=122.9

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ......+|+.|+|||.+.+
T Consensus       142 ~~~qi~~~l~~lH~~~ivH~Dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~  211 (298)
T 2zv2_A          142 YFQDLIKGIEYLHYQKIIHRDIKP--------SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSE  211 (298)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCT
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCH--------HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhcc
Confidence            466889999999999999999999        999999999999999999877654321  2245568999999999876


Q ss_pred             CC---CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          89 RK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        89 ~~---~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      ..   .+.++||||+|+++|+++  .|..||.+.........+......     .......++++.+++.+||+.||++|
T Consensus       212 ~~~~~~~~~~Di~slG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~R  284 (298)
T 2zv2_A          212 TRKIFSGKALDVWAMGVTLYCFV--FGQCPFMDERIMCLHSKIKSQALE-----FPDQPDIAEDLKDLITRMLDKNPESR  284 (298)
T ss_dssp             TCCCEESHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCC-----CCSSSCCCHHHHHHHHHHTCSCTTTS
T ss_pred             CCCCCCCchhhhHhHHHHHHHHH--HCCCCCCCccHHHHHHHHhcccCC-----CCCccccCHHHHHHHHHHhhcChhhC
Confidence            54   367899999999999999  567899888766665555432211     11234678899999999999999999


Q ss_pred             CCHHHH--HHHHHh
Q psy4332         166 PSFTEI--HLFLQR  177 (188)
Q Consensus       166 ps~~el--~~~l~~  177 (188)
                      |++.|+  |+||++
T Consensus       285 ~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          285 IVVPEIKLHPWVTR  298 (298)
T ss_dssp             CCHHHHTTCHHHHC
T ss_pred             CCHHHHhcCccccC
Confidence            999999  888864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.97  E-value=2.4e-32  Score=205.55  Aligned_cols=163  Identities=18%  Similarity=0.223  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhccc----------ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKN----------GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~----------~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~   77 (188)
                      .++.+++.|+.|+|++          ||+|+||||        +||+++.++.+||+|||+++...............+|
T Consensus       125 ~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp--------~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt  196 (322)
T 3soc_A          125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS--------KNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGT  196 (322)
T ss_dssp             HHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSG--------GGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCC
T ss_pred             HHHHHHHHHHHHHHhhccccccccCCCEEeCCCCh--------HhEEECCCCeEEEccCCcccccccccCccccccCccC
Confidence            4567889999999999          999999999        9999999999999999998766544332333445689


Q ss_pred             ccccchhhhhcC-----CCCChhhHHHHHHHHHHHHhCCCCCCCCCCC----------------HHHHHHHhhcccCCCC
Q psy4332          78 IRWMAWESVRLR-----KFTTKSDVWSFGVTLWEILNLARHRPYEGLT----------------DLEVLENISHLHADDG  136 (188)
Q Consensus        78 ~~~~~Pe~~~~~-----~~~~~~di~slG~~~~~l~t~~~~~p~~~~~----------------~~~~~~~~~~~~~~~~  136 (188)
                      +.|+|||.+.+.     .++.++||||+|+++|+++  +|..||.+..                .......+........
T Consensus       197 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (322)
T 3soc_A          197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA--SRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPV  274 (322)
T ss_dssp             GGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH--TTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCC
T ss_pred             ccccCHhhcccccccCcCCCccchhHHHHHHHHHHH--hCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCC
Confidence            999999999863     3456789999999999999  5667776431                1122222222111111


Q ss_pred             CcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      ..........+.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus       275 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          275 LRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            11111112235669999999999999999999999999988754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=1.1e-31  Score=204.38  Aligned_cols=152  Identities=22%  Similarity=0.345  Sum_probs=126.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+.
T Consensus       125 ~~~~qi~~aL~~LH~~givHrDlkp--------~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  194 (353)
T 2i0e_A          125 FYAAEIAIGLFFLQSKGIIYRDLKL--------DNVMLDSEGHIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIA  194 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCEEeccCCH--------HHEEEcCCCcEEEEeCCcccccccCC--cccccccCCccccChhhhc
Confidence            3567899999999999999999999        99999999999999999987643222  1234567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+|+  .|..||.+....+....+......       .....+.++.+++.+||..||++||+
T Consensus       195 ~~~~~~~~DiwslG~il~ell--~G~~Pf~~~~~~~~~~~i~~~~~~-------~p~~~s~~~~~li~~lL~~dP~~R~~  265 (353)
T 2i0e_A          195 YQPYGKSVDWWAFGVLLYEML--AGQAPFEGEDEDELFQSIMEHNVA-------YPKSMSKEAVAICKGLMTKHPGKRLG  265 (353)
T ss_dssp             TCCBSTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCC-------CCTTSCHHHHHHHHHHTCSCTTSCTT
T ss_pred             CCCcCCcccccchHHHHHHHH--cCCCCCCCCCHHHHHHHHHhCCCC-------CCCCCCHHHHHHHHHHhhcCHHHcCC
Confidence            888999999999999999999  567899998888877777643211       12457889999999999999999995


Q ss_pred             -----HHHH--HHHHHhc
Q psy4332         168 -----FTEI--HLFLQRK  178 (188)
Q Consensus       168 -----~~el--~~~l~~~  178 (188)
                           ++++  |+||+.+
T Consensus       266 ~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          266 CGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             CSTTHHHHHHTSGGGTTC
T ss_pred             CCCCCHHHHhcCccccCC
Confidence                 5788  7888754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=8.9e-33  Score=211.59  Aligned_cols=158  Identities=11%  Similarity=0.121  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......     ....+++.|+|||.+.
T Consensus       198 ~i~~qi~~aL~~LH~~~ivHrDikp--------~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~  264 (371)
T 3q60_A          198 ILTAQLIRLAANLQSKGLVHGHFTP--------DNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLN  264 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTCSG--------GGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCCccCcCCH--------HHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhcc
Confidence            4568999999999999999999999        99999999999999999988664322     1333558899999998


Q ss_pred             c--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHH--HHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 L--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV--LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      +  ..++.++||||+|+++|+++|  |..||.+......  ......................+.++.+++.+||+.||+
T Consensus       265 ~~~~~~~~~~DiwSlG~il~ellt--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  342 (371)
T 3q60_A          265 ASTATFTHALNAWQLGLSIYRVWC--LFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRR  342 (371)
T ss_dssp             CSEEECCHHHHHHHHHHHHHHHHH--SSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTT
T ss_pred             CCCCCcCccccHHHHHHHHHHHHh--CCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChh
Confidence            7  678999999999999999994  6789987643211  000000000011111222246789999999999999999


Q ss_pred             CCCCHHHH--HHHHHhccC
Q psy4332         164 ERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~~  180 (188)
                      +||++.++  |+||+++..
T Consensus       343 ~Rpt~~e~l~hp~f~~~~~  361 (371)
T 3q60_A          343 RRLLPLEAMETPEFLQLQN  361 (371)
T ss_dssp             TCCCHHHHTTSHHHHHHHH
T ss_pred             hCCCHHHHhcCHHHHHHHH
Confidence            99999999  899997753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=7.6e-32  Score=200.07  Aligned_cols=160  Identities=21%  Similarity=0.218  Sum_probs=122.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+|+.|+|||.+.
T Consensus       105 ~~~~ql~~~l~~lH~~~ivH~dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~  174 (292)
T 3o0g_A          105 SFLFQLLKGLGFCHSRNVLHRDLKP--------QNLLINRNGELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECCSCC--SCCCSCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEeecccceecCCcc--ccccCCccccCCcChHHHc
Confidence            4567899999999999999999999        99999999999999999987664332  2334556788999999998


Q ss_pred             cCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc----------------------ccCCCC
Q psy4332          88 LRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF----------------------IYLPTP  144 (188)
Q Consensus        88 ~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~  144 (188)
                      +.. ++.++||||+|+++++++|+ +..+|.+....+....+..........                      .....+
T Consensus       175 ~~~~~~~~~DiwslG~il~~l~~~-~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (292)
T 3o0g_A          175 GAKLYSTSIDMWSAGCIFAELANA-GRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP  253 (292)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHTTT-SCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTST
T ss_pred             CCCCcCchHHHHHHHHHHHHHHHc-CCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhccc
Confidence            765 79999999999999999953 234466666555555543321111100                      001123


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ..+.++.+++.+||+.||++|||++|+  |+||++.
T Consensus       254 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence            467899999999999999999999999  7888864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=7.8e-32  Score=207.94  Aligned_cols=162  Identities=20%  Similarity=0.285  Sum_probs=126.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++ .++.+||+|||+++......   ......+|+.|+|||.+
T Consensus       145 ~~~~qi~~aL~~LH~~~ivHrDlkp--------~Nill~~~~~~~kL~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~  213 (394)
T 4e7w_A          145 LYMYQLLRSLAYIHSIGICHRDIKP--------QNLLLDPPSGVLKLIDFGSAKILIAGE---PNVSYICSRYYRAPELI  213 (394)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEETTTTEEEECCCTTCEECCTTC---CCCSSCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCCCCH--------HHEEEcCCCCcEEEeeCCCcccccCCC---CCcccccCcCccCHHHH
Confidence            3567899999999999999999999        999999 78999999999987764332   22345678899999999


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC--------------c--------ccCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE--------------F--------IYLPT  143 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------~--------~~~~~  143 (188)
                      .+. .++.++||||+||++|+++  +|..||.+....+....+.........              .        .....
T Consensus       214 ~~~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (394)
T 4e7w_A          214 FGATNYTTNIDIWSTGCVMAELM--QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFR  291 (394)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSC
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhcc
Confidence            765 4899999999999999999  567899988766655554432111110              0        00112


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~  182 (188)
                      ...+.++.+++.+||+.||++|||+.|+  |+||++++...
T Consensus       292 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          292 PRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             ccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence            3467899999999999999999999999  89999886543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=7.7e-32  Score=205.22  Aligned_cols=155  Identities=30%  Similarity=0.524  Sum_probs=124.3

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+|+.|+|||.+.+
T Consensus       198 ~~~ql~~aL~~LH~~~ivH~Dikp--------~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  269 (359)
T 3vhe_A          198 YSFQVAKGMEFLASRKCIHRDLAA--------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  269 (359)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCh--------hhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC
Confidence            567899999999999999999999        999999999999999999887655443334455667889999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ..++.++||||+|+++|+++| .|..||.+....+ ....+....      ........+.++.+++.+||..||++||+
T Consensus       270 ~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps  342 (359)
T 3vhe_A          270 RVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDEEFCRRLKEGT------RMRAPDYTTPEMYQTMLDCWHGEPSQRPT  342 (359)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTT-TSCCSSTTCCCSHHHHHHHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCchhhhhhHHHHHHHHHh-cCCCCCCccchhHHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            899999999999999999994 1678998765333 333332211      11122456789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.|++..|+++
T Consensus       343 ~~ell~~L~~~  353 (359)
T 3vhe_A          343 FSELVEHLGNL  353 (359)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999988876

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=6.6e-32  Score=206.08  Aligned_cols=155  Identities=22%  Similarity=0.253  Sum_probs=127.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc----eEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.++    .+||+|||++.......   ......||+.|+||
T Consensus       119 ~i~~qi~~aL~~LH~~givHrDlkp--------~NIll~~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aP  187 (361)
T 2yab_A          119 SFIKQILDGVNYLHTKKIAHFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAP  187 (361)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEESCTTSSSCCEEECCCSSCEECCTTC---CCCCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEEeCCCCCccCEEEEecCCceEcCCCC---ccccCCCCccEECc
Confidence            3567889999999999999999999        999998776    79999999988765432   22355689999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++||||+|+++|+++  +|..||.+....+....+.........   ......+.++.+++.+||..||+
T Consensus       188 E~~~~~~~~~~~DiwslGvil~~ll--~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~  262 (361)
T 2yab_A          188 EIVNYEPLGLEADMWSIGVITYILL--SGASPFLGDTKQETLANITAVSYDFDE---EFFSQTSELAKDFIRKLLVKETR  262 (361)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHH--HSCCSSCCSSHHHHHHHHHTTCCCCCH---HHHTTSCHHHHHHHHHHSCSSTT
T ss_pred             hHHcCCCCCccccHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhcCCCCCc---hhccCCCHHHHHHHHHHCCCChh
Confidence            9999888999999999999999999  567899998888877776643322111   11245678999999999999999


Q ss_pred             CCCCHHHH--HHHHHhc
Q psy4332         164 ERPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~  178 (188)
                      +|||+.|+  |+||+..
T Consensus       263 ~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          263 KRLTIQEALRHPWITPV  279 (361)
T ss_dssp             TSCCHHHHHTSTTTSCS
T ss_pred             HCcCHHHHhcCcCcCCC
Confidence            99999999  7888743

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=9.3e-32  Score=202.48  Aligned_cols=163  Identities=20%  Similarity=0.232  Sum_probs=123.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus       104 ~~~~qi~~aL~~LH~~~ivH~Dikp--------~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~  173 (324)
T 3mtl_A          104 LFLFQLLRGLAYCHRQKVLHRDLKP--------QNLLINERGELKLADFGLARAKSIPT--KTYDNEVVTLWYRPPDILL  173 (324)
T ss_dssp             HHHHHHHHHHHHHHHTTEEESSCCG--------GGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCccCCCcCH--------HHEEECCCCCEEEccCcccccccCCc--cccccccCcccccChhhhc
Confidence            3567899999999999999999999        99999999999999999987654322  1223446788999999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc-----------------------CCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-----------------------LPT  143 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~  143 (188)
                      + ..++.++||||+|+++|+++  +|..||.+....+....+............                       ...
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (324)
T 3mtl_A          174 GSTDYSTQIDMWGVGCIFYEMA--TGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHA  251 (324)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhc
Confidence            6 45799999999999999999  467899988877666655432221111100                       011


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~  182 (188)
                      +..+.++.+++.+||+.||++|||++|+  |+||+++....
T Consensus       252 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  292 (324)
T 3mtl_A          252 PRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI  292 (324)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred             CCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence            3457889999999999999999999999  89999886643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=5.8e-32  Score=200.39  Aligned_cols=159  Identities=19%  Similarity=0.244  Sum_probs=118.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+|+.|+|||.+.
T Consensus       104 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~  173 (288)
T 1ob3_A          104 SFLLQLLNGIAYCHDRRVLHRDLKP--------QNLLINREGELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLM  173 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEEcCCCCEEEeECccccccCccc--cccccccccccccCchhee
Confidence            4567899999999999999999999        99999999999999999987653322  1223445788999999997


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc----------------------ccCCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF----------------------IYLPTP  144 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~  144 (188)
                      +. .++.++||||+|+++|+++  +|..||.+....+....+..........                      ......
T Consensus       174 ~~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (288)
T 1ob3_A          174 GSKKYSTTIDIWSVGCIFAEMV--NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLK  251 (288)
T ss_dssp             TCCSCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCC
T ss_pred             CCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhh
Confidence            54 4799999999999999999  4678998887666555443211110000                      000113


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ..+.++.+++.+||+.||++|||++|+  |+||++.
T Consensus       252 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          252 GLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             SCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             hcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            467899999999999999999999999  7888764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=1.5e-31  Score=200.03  Aligned_cols=157  Identities=31%  Similarity=0.561  Sum_probs=128.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       154 ~i~~qi~~~l~~lH~~~ivH~dikp--------~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  225 (314)
T 2ivs_A          154 SFAWQISQGMQYLAEMKLVHRDLAA--------RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF  225 (314)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCcccccch--------heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc
Confidence            3567899999999999999999999        99999999999999999987765443333334555678899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+.........+.....      .......+.++.+++.+||+.||++||+
T Consensus       226 ~~~~~~~~Di~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps  298 (314)
T 2ivs_A          226 DHIYTTQSDVWSFGVLLWEIVT-LGGNPYPGIPPERLFNLLKTGHR------MERPDNCSEEMYRLMLQCWKQEPDKRPV  298 (314)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHT-TSCCSSTTCCGGGHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCcCchhhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHhhcCCc------CCCCccCCHHHHHHHHHHccCChhhCcC
Confidence            8888999999999999999995 26789988876666655543211      1222457889999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++.+.|+++-
T Consensus       299 ~~~l~~~l~~~~  310 (314)
T 2ivs_A          299 FADISKDLEKMM  310 (314)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999888764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=2.2e-31  Score=208.79  Aligned_cols=157  Identities=29%  Similarity=0.527  Sum_probs=130.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||+++|+||||||        +||+++.++.+||+|||+++...... ........++..|+|||.+.
T Consensus       288 ~~~~qi~~~l~~LH~~~ivHrDlkp--------~Nill~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          288 DFSAQIAEGMAFIEQRNYIHRDLRA--------ANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCSG--------GGEEECTTCCEEECSTTGGGGBCCHH-HHTTCSSSSCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCH--------HHEEECCCCcEEEeeCCCceEcCCCc-eeccCCCcccccccCHHHhc
Confidence            4577899999999999999999999        99999999999999999987764322 22233445677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||++++|++| .|..||.+....+....+.....      ......++.++.+++.+||..||++|||
T Consensus       359 ~~~~~~~~DvwslG~~l~el~t-~g~~P~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~RPt  431 (454)
T 1qcf_A          359 FGSFTIKSDVWSFGILLMEIVT-YGRIPYPGMSNPEVIRALERGYR------MPRPENCPEELYNIMMRCWKNRPEERPT  431 (454)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCHHHHHHHHHHTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCcHHHHHhHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHccCChhHCcC
Confidence            8899999999999999999995 27899999887777766654321      1122457889999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      ++++...|+++..
T Consensus       432 ~~~i~~~L~~~~~  444 (454)
T 1qcf_A          432 FEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998854

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=208.35  Aligned_cols=156  Identities=21%  Similarity=0.287  Sum_probs=127.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc---CcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG---KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++   .++.+||+|||++.......  .......||+.|+|||
T Consensus       114 ~i~~qil~aL~~lH~~givHrDlKp--------~NIll~~~~~~~~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE  183 (444)
T 3soa_A          114 HCIQQILEAVLHCHQMGVVHRNLKP--------ENLLLASKLKGAAVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPE  183 (444)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSS--------TTEEESBSSTTCCEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCH--------HHEEEeccCCCCcEEEccCceeEEecCCC--ceeecccCCcccCCHH
Confidence            3567889999999999999999999        999998   45789999999987765432  2234566899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+....+....+......   .........++++.+++.+||+.||++
T Consensus       184 ~l~~~~~~~~~DIwSlGvilyell--~G~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~  258 (444)
T 3soa_A          184 VLRKDPYGKPVDLWACGVILYILL--VGYPPFWDEDQHRLYQQIKAGAYD---FPSPEWDTVTPEAKDLINKMLTINPSK  258 (444)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHTCCC---CCTTTTTTSCHHHHHHHHHHSCSSTTT
T ss_pred             HhcCCCCCCccccHHHHHHHHHHH--hCCCCCCCccHHHHHHHHHhCCCC---CCccccccCCHHHHHHHHHHcCCChhH
Confidence            999888999999999999999999  567899998887777777653321   122223467889999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      |||+.|+  |+||+..
T Consensus       259 Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          259 RITAAEALKHPWISHR  274 (444)
T ss_dssp             SCCHHHHHHSCTTHHH
T ss_pred             CCCHHHHhcCccccCC
Confidence            9999999  6777654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=5.3e-32  Score=212.78  Aligned_cols=158  Identities=16%  Similarity=0.200  Sum_probs=120.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......   ......+|+.|+|||++.
T Consensus       168 ~~~~qil~aL~~lH~~~iiHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~  236 (464)
T 3ttj_A          168 YLLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVIL  236 (464)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEECCCCCC-----CC---CC----CCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCh--------HhEEEeCCCCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHc
Confidence            3567899999999999999999999        99999999999999999987664332   234456889999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-------------------------cCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-------------------------YLP  142 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~  142 (188)
                      +..++.++||||+||++|+|+  +|..||.+.+..+....+......+....                         ..+
T Consensus       237 ~~~~~~~~DiwSlG~il~ell--~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (464)
T 3ttj_A          237 GMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP  314 (464)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCc
Confidence            889999999999999999999  56789999887776666544322211000                         000


Q ss_pred             C----CC------ChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         143 T----PQ------TTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       143 ~----~~------~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      .    ..      .+.++.+|+.+||..||++|||++|+  |+||+..
T Consensus       315 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          315 DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             GGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            0    00      05678999999999999999999999  8899854

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.97  E-value=2.3e-31  Score=197.29  Aligned_cols=161  Identities=24%  Similarity=0.350  Sum_probs=115.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       124 ~i~~qi~~~L~~lH~~~i~H~Dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          124 DIARQTARGMDYLHAKSIIHRDLKS--------NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEETTTEEEECCCC------------------CCCTTCCHHHHC
T ss_pred             HHHHHHHHHHHHHHhCCcccccCcc--------ceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhc
Confidence            4567889999999999999999999        99999999999999999987654332222334456888999999986


Q ss_pred             ---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHH-HHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 ---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL-ENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                         +..++.++||||+|++++++++  |..||.+....... ..+......  .........++.++.+++.+||..||+
T Consensus       196 ~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~  271 (289)
T 3og7_A          196 MQDSNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIEMVGRGSLS--PDLSKVRSNCPKRMKRLMAECLKKKRD  271 (289)
T ss_dssp             ----CCSCHHHHHHHHHHHHHHHHH--SSCTTSSCCCHHHHHHHHHHTSCC--CCTTSSCTTSCHHHHHHHHHHTCSSGG
T ss_pred             ccCCCCCCcccchHHHHHHHHHHHH--CCCCccccchHHHHHHHhcccccC--cchhhccccCCHHHHHHHHHHccCChh
Confidence               4567889999999999999994  67899876544433 333222111  111122345688999999999999999


Q ss_pred             CCCCHHHHHHHHHhccC
Q psy4332         164 ERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       164 ~Rps~~el~~~l~~~~~  180 (188)
                      +||++.++++.|+++.+
T Consensus       272 ~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          272 ERPSFPRILAEIEELAR  288 (289)
T ss_dssp             GSCCHHHHHHHHHHTTC
T ss_pred             hCCCHHHHHHHHHHHhh
Confidence            99999999999988753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=5.6e-32  Score=206.98  Aligned_cols=157  Identities=31%  Similarity=0.552  Sum_probs=126.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc---eEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF---EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|||++||+||||||        +||+++.++   .+||+|||+++...............+|+.|+|||
T Consensus       185 ~i~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          185 HVARDIACGCQYLEENHFIHRDIAA--------RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE  256 (367)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCh--------hhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence            4678899999999999999999999        999998544   59999999987553332222333445678899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||||+++++++| .|..||.+....+....+.....      .......+.++.+++.+||+.||++
T Consensus       257 ~~~~~~~~~~~DvwslG~il~ellt-~g~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~  329 (367)
T 3l9p_A          257 AFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVTSGGR------MDPPKNCPGPVYRIMTQCWQHQPED  329 (367)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHHHcCCCHhH
Confidence            9998899999999999999999995 27899999888777776654321      1223456789999999999999999


Q ss_pred             CCCHHHHHHHHHhcc
Q psy4332         165 RPSFTEIHLFLQRKN  179 (188)
Q Consensus       165 Rps~~el~~~l~~~~  179 (188)
                      ||++.++++.|+.+.
T Consensus       330 Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          330 RPNFAIILERIEYCT  344 (367)
T ss_dssp             SCCHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHh
Confidence            999999988777553

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=2.1e-31  Score=200.11  Aligned_cols=148  Identities=22%  Similarity=0.317  Sum_probs=125.5

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      .+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++.....     .....||+.|+|||.+.+
T Consensus       111 ~~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~g~~kL~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~  177 (318)
T 1fot_A          111 YAAEVCLALEYLHSKDIIYRDLKP--------ENILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVST  177 (318)
T ss_dssp             HHHHHHHHHHHHHTTTEECCCCCG--------GGEEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHCCccccCCCh--------heEEEcCCCCEEEeecCcceecCCc-----cccccCCccccCHhHhcC
Confidence            567899999999999999999999        9999999999999999998765432     234568899999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++|+||+|+++|+|+  +|..||.+....+....+.....       ......+.++.+++.+||..||++||  
T Consensus       178 ~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~lL~~dp~~R~~~  248 (318)
T 1fot_A          178 KPYNKSIDWWSFGILIYEML--AGYTPFYDSNTMKTYEKILNAEL-------RFPPFFNEDVKDLLSRLITRDLSQRLGN  248 (318)
T ss_dssp             CCBCTTHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSCTTTCTTS
T ss_pred             CCCCcccchhhhHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            88999999999999999999  56789998887777777664321       11245688999999999999999999  


Q ss_pred             ---CHHHH--HHHHHhc
Q psy4332         167 ---SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ---s~~el--~~~l~~~  178 (188)
                         +++++  |+||+.+
T Consensus       249 ~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          249 LQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             STTTTHHHHTSGGGSSC
T ss_pred             cCCCHHHHhcCccccCC
Confidence               89999  7888754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=2.9e-31  Score=207.70  Aligned_cols=152  Identities=18%  Similarity=0.233  Sum_probs=125.8

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.|+.|||+ +||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||++
T Consensus       252 ~~~~qi~~aL~~LH~~~giiHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~  321 (446)
T 4ejn_A          252 FYGAEIVSALDYLHSEKNVVYRDLKL--------ENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVL  321 (446)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCCCCCG--------GGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCEEECCCCH--------HHEEECCCCCEEEccCCCceeccCCC--cccccccCCccccCHhhc
Confidence            456789999999998 9999999999        99999999999999999987643332  123456789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++|+++  +|..||.+.........+.....       ......+.++.+++.+||+.||++||
T Consensus       322 ~~~~~~~~~DiwslG~il~ell--~g~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          322 EDNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHEKLFELILMEEI-------RFPRTLGPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             HTSCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCCCCccchhhhHHHHHHHh--hCCCCCCCCCHHHHHHHHHhCCC-------CCCccCCHHHHHHHHHHcccCHHHhC
Confidence            9889999999999999999999  56899998887777776654321       11245678999999999999999999


Q ss_pred             -----CHHHH--HHHHHhc
Q psy4332         167 -----SFTEI--HLFLQRK  178 (188)
Q Consensus       167 -----s~~el--~~~l~~~  178 (188)
                           +++|+  |+||+.+
T Consensus       393 ~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          393 GGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TCSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCHHHHHhCccccCC
Confidence                 99999  7888865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=2.5e-31  Score=200.26  Aligned_cols=159  Identities=27%  Similarity=0.478  Sum_probs=127.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......+|+.|+|||.+
T Consensus       155 ~i~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~  226 (325)
T 3kul_A          155 GMLRGVGAGMRYLSDLGYVHRDLAA--------RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI  226 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeCCCCCc--------ceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHh
Confidence            4567889999999999999999999        9999999999999999998876543221 122334457789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++|++++ .|..||.+....+....+.....      ......++.++.+++.+||..||++||
T Consensus       227 ~~~~~~~~~Di~slG~il~ell~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rp  299 (325)
T 3kul_A          227 AFRTFSSASDVWSFGVVMWEVLA-YGERPYWNMTNRDVISSVEEGYR------LPAPMGCPHALHQLMLDCWHKDRAQRP  299 (325)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHT-TSCCTTTTSCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHc-CCCCCcccCCHHHHHHHHHcCCC------CCCCCCcCHHHHHHHHHHccCChhhCc
Confidence            98889999999999999999994 27899999888777776654311      122346788999999999999999999


Q ss_pred             CHHHHHHHHHhccCC
Q psy4332         167 SFTEIHLFLQRKNLG  181 (188)
Q Consensus       167 s~~el~~~l~~~~~~  181 (188)
                      ++.++.+.|+++...
T Consensus       300 s~~eil~~L~~l~~~  314 (325)
T 3kul_A          300 RFSQIVSVLDALIRS  314 (325)
T ss_dssp             CHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHhC
Confidence            999999999887443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=2.8e-31  Score=199.72  Aligned_cols=156  Identities=19%  Similarity=0.314  Sum_probs=126.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ......+|+.|+|||.+.
T Consensus       145 ~i~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~  214 (321)
T 2c30_A          145 TVCEAVLQALAYLHAQGVIHRDIKS--------DSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVIS  214 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhc
Confidence            4567889999999999999999999        999999999999999999876644321  224556889999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  +|..||.+....+....+.......    .......+.++.+++.+||+.||++||+
T Consensus       215 ~~~~~~~~Dv~slG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps  288 (321)
T 2c30_A          215 RSLYATEVDIWSLGIMVIEMV--DGEPPYFSDSPVQAMKRLRDSPPPK----LKNSHKVSPVLRDFLERMLVRDPQERAT  288 (321)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSSCCC----CTTGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhcCCCCC----cCccccCCHHHHHHHHHHccCChhhCcC
Confidence            888999999999999999999  4678998887766666554322111    1112345788999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      ++++  |+||.+..
T Consensus       289 ~~ell~hp~~~~~~  302 (321)
T 2c30_A          289 AQELLDHPFLLQTG  302 (321)
T ss_dssp             HHHHHTSGGGGGCC
T ss_pred             HHHHhcChhhccCC
Confidence            9999  67887653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=3.2e-31  Score=208.06  Aligned_cols=165  Identities=24%  Similarity=0.338  Sum_probs=115.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-------------------
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-------------------   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------   68 (188)
                      .++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++........                   
T Consensus       160 ~~~~qi~~aL~~LH~~~iiHrDlKp--------~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (458)
T 3rp9_A          160 TLLYNLLVGVKYVHSAGILHRDLKP--------ANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP  231 (458)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC--------------
T ss_pred             HHHHHHHHHHHHHHhCCcCCCCCCh--------hhEEECCCCCEeecccccchhccCccccccccccCcccccccccccc
Confidence            4567899999999999999999999        9999999999999999999876432110                   


Q ss_pred             ------cccCCCCCCccccchhhhh-cCCCCChhhHHHHHHHHHHHHhCC---------CCCCCCCCCH-----------
Q psy4332          69 ------RVHDNTSLPIRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNLA---------RHRPYEGLTD-----------  121 (188)
Q Consensus        69 ------~~~~~~~~~~~~~~Pe~~~-~~~~~~~~di~slG~~~~~l~t~~---------~~~p~~~~~~-----------  121 (188)
                            .......+|+.|+|||++. +..++.++||||+||++|||+|+.         +..+|.+...           
T Consensus       232 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~  311 (458)
T 3rp9_A          232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGN  311 (458)
T ss_dssp             -------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---------------
T ss_pred             ccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccc
Confidence                  1123345788999999874 456899999999999999999631         4566655321           


Q ss_pred             ---------HHHHHHhhcccCCC------------------------CCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332         122 ---------LEVLENISHLHADD------------------------GEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus       122 ---------~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                               ......+.......                        ........+..+.++.+|+.+||..||++|||+
T Consensus       312 ~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~  391 (458)
T 3rp9_A          312 DFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITI  391 (458)
T ss_dssp             -----CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             cccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCH
Confidence                     11111111111100                        001111124457899999999999999999999


Q ss_pred             HHH--HHHHHhccC
Q psy4332         169 TEI--HLFLQRKNL  180 (188)
Q Consensus       169 ~el--~~~l~~~~~  180 (188)
                      +|+  |+||+++..
T Consensus       392 ~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          392 NECLAHPFFKEVRI  405 (458)
T ss_dssp             HHHHHSGGGTTTCC
T ss_pred             HHHhcCHhhhhcCC
Confidence            999  889998754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.97  E-value=5.7e-31  Score=206.38  Aligned_cols=157  Identities=31%  Similarity=0.565  Sum_probs=124.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++...... ........++..|+|||.+.
T Consensus       284 ~i~~qi~~~l~~LH~~~ivHrDlkp--------~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~  354 (452)
T 1fmk_A          284 DMAAQIASGMAYVERMNYVHRDLRA--------ANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL  354 (452)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCh--------hhEEECCCCCEEECCCccceecCCCc-eecccCCcccccccCHhHHh
Confidence            4577899999999999999999999        99999999999999999987664322 12223445677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|+++| .|..||.+....+....+.....      ......+++.+.+++.+||..||++|||
T Consensus       355 ~~~~~~~sDvwslG~~l~el~t-~g~~P~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rpt  427 (452)
T 1fmk_A          355 YGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNREVLDQVERGYR------MPCPPECPESLHDLMCQCWRKEPEERPT  427 (452)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TTCCSSTTCCHHHHHHHHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCccccHHhHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            8899999999999999999995 26899999887777766643211      1122467889999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      ++++...|+++-.
T Consensus       428 ~~~l~~~L~~~~~  440 (452)
T 1fmk_A          428 FEYLQAFLEDYFT  440 (452)
T ss_dssp             HHHHHHHHHTTTS
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.4e-31  Score=202.66  Aligned_cols=161  Identities=17%  Similarity=0.192  Sum_probs=125.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++.....     .....+|+.|+|||.+.
T Consensus       132 ~~~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~  198 (367)
T 1cm8_A          132 FLVYQMLKGLRYIHAAGIIHRDLKP--------GNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVIL  198 (367)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccccCcCH--------HHEEEcCCCCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHh
Confidence            3567899999999999999999999        9999999999999999998765432     23446788999999998


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC------------------------cccCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE------------------------FIYLP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~  142 (188)
                      + ..++.++||||+||++++++  +|..||.+....+....+.........                        .....
T Consensus       199 ~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (367)
T 1cm8_A          199 NWMRYTQTVDIWSVGCIMAEMI--TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASI  276 (367)
T ss_dssp             TTTCCCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGT
T ss_pred             CCCCCChhhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHH
Confidence            6 57899999999999999999  567899988776665555432211110                        00111


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYV  183 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~  183 (188)
                      .+..+.++.+++.+||..||++|||++|+  |+||++......
T Consensus       277 ~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~  319 (367)
T 1cm8_A          277 LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED  319 (367)
T ss_dssp             CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred             CCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCcc
Confidence            23567899999999999999999999999  789998765443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=4.1e-31  Score=201.82  Aligned_cols=155  Identities=17%  Similarity=0.241  Sum_probs=125.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.+   +.+||+|||++.......   ......+|+.|+|||
T Consensus       132 ~~~~qi~~al~~lH~~~ivH~Dlkp--------~NIll~~~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE  200 (362)
T 2bdw_A          132 HCIQQILESIAYCHSNGIVHRNLKP--------ENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPE  200 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSG--------GGEEESCSSTTCCEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCch--------HHEEEecCCCCCCEEEeecCcceEecCCc---ccccCCCCccccCHH
Confidence            3467889999999999999999999        99999765   459999999987765332   223456889999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      ++.+..++.++||||+|+++|+++  +|..||.+....+....+.......   ........+.++.+++.+||..||++
T Consensus       201 ~~~~~~~~~~~DiwslG~il~~ll--~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~  275 (362)
T 2bdw_A          201 VLKKDPYSKPVDIWACGVILYILL--VGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLIDSMLTVNPKK  275 (362)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCCC---CTTGGGGSCHHHHHHHHHHSCSSGGG
T ss_pred             HHccCCCCchhhHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhCCCCC---CcccccCCCHHHHHHHHHHcCCChhh
Confidence            999888999999999999999999  5678999888777777665433211   11112346789999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      ||++.++  |+||+..
T Consensus       276 R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          276 RITADQALKVPWICNR  291 (362)
T ss_dssp             SCCHHHHTTSHHHHTH
T ss_pred             CcCHHHHhcCcccCCC
Confidence            9999999  8888753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.97  E-value=2.7e-31  Score=197.35  Aligned_cols=160  Identities=15%  Similarity=0.155  Sum_probs=122.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce-----EEEccCCCCccCCCCccc-----cccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE-----IKISDFATDSDMFSSDYY-----RVHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~-----~kl~dfg~~~~~~~~~~~-----~~~~~~~~~   77 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.     +||+|||++.........     .......+|
T Consensus       110 ~i~~qi~~~l~~lH~~~ivH~Dlkp--------~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt  181 (298)
T 1csn_A          110 MAAKQMLARVQSIHEKSLVYRDIKP--------DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT  181 (298)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCG--------GGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCH--------HHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCC
Confidence            4678899999999999999999999        9999987765     999999998776543221     123455688


Q ss_pred             ccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHH
Q psy4332          78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---DLEVLENISHLHADDGEFIYLPTPQTTKDILDLM  154 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  154 (188)
                      +.|+|||.+.+..++.++||||+|+++|+++  +|..||.+..   .......+.........  ......++.++.+++
T Consensus       182 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li  257 (298)
T 1csn_A          182 ARYMSINTHLGREQSRRDDLEALGHVFMYFL--RGSLPWQGLKAATNKQKYERIGEKKQSTPL--RELCAGFPEEFYKYM  257 (298)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH--HSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--HHHTTTSCHHHHHHH
T ss_pred             cccCCchhhcCCCCChHHHHHHHHHHHHHHH--cCCCCcchhhccccHHHHHHHHhhccCccH--HHHHhhCcHHHHHHH
Confidence            9999999999888999999999999999999  5678988743   33333333221110111  111235678999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhcc
Q psy4332         155 NECWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       155 ~~cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                      .+||+.||++||+++++.+.|+++-
T Consensus       258 ~~~l~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          258 HYARNLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             HHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHhcCCcccCCCHHHHHHHHHHHH
Confidence            9999999999999999988887663

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=3.2e-31  Score=204.30  Aligned_cols=152  Identities=16%  Similarity=0.280  Sum_probs=120.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|||++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||++.
T Consensus       157 ~~~~qi~~aL~~LH~~givHrDLKp--------~NILl~~~g~ikL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~  226 (396)
T 4dc2_A          157 FYSAEISLALNYLHERGIIYRDLKL--------DNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILR  226 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCEEeccCCH--------HHEEECCCCCEEEeecceeeecccCC--CccccccCCcccCCchhhc
Confidence            4567899999999999999999999        99999999999999999987643322  2334567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---------HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---------DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      +..++.++|+||+|+++|+|+  +|..||....         .......+....       .......+.++.+++.+||
T Consensus       227 ~~~~~~~~DiwslGvllyell--~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~p~~~s~~~~~li~~lL  297 (396)
T 4dc2_A          227 GEDYGFSVDWWALGVLMFEMM--AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------IRIPRSLSVKAASVLKSFL  297 (396)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCSSTTTTC------CCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHT
T ss_pred             CCCCChHHHHHHHHHHHHHHH--hCCCCCcccccccccchhhHHHHHHHHhccc-------cCCCCcCCHHHHHHHHHHh
Confidence            888999999999999999999  5678886431         122333333211       1122457889999999999


Q ss_pred             ccCCCCCCCH------HHH--HHHHHhc
Q psy4332         159 KRSPTERPSF------TEI--HLFLQRK  178 (188)
Q Consensus       159 ~~dp~~Rps~------~el--~~~l~~~  178 (188)
                      +.||++||++      +|+  |+||+.+
T Consensus       298 ~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          298 NKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             CSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             cCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            9999999985      677  8888765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.8e-32  Score=203.07  Aligned_cols=157  Identities=17%  Similarity=0.258  Sum_probs=127.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC--cceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK--KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.  ++.+||+|||++........   .....+++.|+|||.
T Consensus       106 ~i~~qi~~al~~lH~~givH~Dlkp--------~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~  174 (321)
T 1tki_A          106 SYVHQVCEALQFLHSHNIGHFDIRP--------ENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEV  174 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSSSCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCCCH--------HHEEEccCCCCCEEEEECCCCeECCCCCc---cccccCChhhcCcHH
Confidence            3567889999999999999999999        9999987  78899999999877654322   223457889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+|+++|+++  +|..||.+....+....+.........   ......+.++.+++.+||..||++|
T Consensus       175 ~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T 1tki_A          175 HQHDVVSTATDMWSLGTLVYVLL--SGINPFLAETNQQIIENIMNAEYTFDE---EAFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             HTTCEECHHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHTCCCCCH---HHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             hcCCCCCchhhHHHHHHHHHHHH--hCCCCCcCCCHHHHHHHHHcCCCCCCh---hhhccCCHHHHHHHHHHcCCChhHC
Confidence            98877899999999999999999  567899998877777776643322111   1124567899999999999999999


Q ss_pred             CCHHHH--HHHHHhccC
Q psy4332         166 PSFTEI--HLFLQRKNL  180 (188)
Q Consensus       166 ps~~el--~~~l~~~~~  180 (188)
                      ||+.|+  |+||++...
T Consensus       250 pt~~e~l~hp~~~~~~~  266 (321)
T 1tki_A          250 MTASEALQHPWLKQKIE  266 (321)
T ss_dssp             CCHHHHHHSHHHHSCGG
T ss_pred             cCHHHHhcChhhccCcc
Confidence            999999  889986543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2e-31  Score=201.98  Aligned_cols=159  Identities=31%  Similarity=0.472  Sum_probs=125.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.+
T Consensus       177 i~~qi~~aL~~LH~~~ivH~Dikp--------~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  248 (344)
T 1rjb_A          177 FAYQVAKGMEFLEFKSCVHRDLAA--------RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE  248 (344)
T ss_dssp             HHHHHHHHHHHHHHTTEEETTCSG--------GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCh--------hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc
Confidence            667899999999999999999999        999999999999999999876654433333344556778999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++| .|..||.+...............     ........+.++.+++.+||..||++||++
T Consensus       249 ~~~~~~~Di~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  322 (344)
T 1rjb_A          249 GIYTIKSDVWSYGILLWEIFS-LGVNPYPGIPVDANFYKLIQNGF-----KMDQPFYATEEIYIIMQSCWAFDSRKRPSF  322 (344)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTT-TSCCSSTTCCCSHHHHHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCChhHhHHHHHHHHHHHHc-CCCCCcccCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            889999999999999999995 26789987754443333332111     111224567899999999999999999999


Q ss_pred             HHHHHHHHhccCC
Q psy4332         169 TEIHLFLQRKNLG  181 (188)
Q Consensus       169 ~el~~~l~~~~~~  181 (188)
                      .++...|+.+-..
T Consensus       323 ~~l~~~l~~~~~~  335 (344)
T 1rjb_A          323 PNLTSFLGCQLAD  335 (344)
T ss_dssp             HHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999877543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=2.7e-31  Score=202.01  Aligned_cols=149  Identities=17%  Similarity=0.215  Sum_probs=126.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++.....     .....||+.|+|||.+.
T Consensus       145 ~~~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~g~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~  211 (350)
T 1rdq_E          145 FYAAQIVLTFEYLHSLDLIYRDLKP--------ENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIIL  211 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCcccccCcc--------ceEEECCCCCEEEcccccceeccCC-----cccccCCccccCHHHhc
Confidence            4567899999999999999999999        9999999999999999998766432     23456889999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+|+  +|..||.+....+....+.....       .....++.++.+++.+||..||++||+
T Consensus       212 ~~~~~~~~DiwslG~il~ell--~g~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~lL~~dp~~R~~  282 (350)
T 1rdq_E          212 SKGYNKAVDWWALGVLIYEMA--AGYPPFFADQPIQIYEKIVSGKV-------RFPSHFSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred             CCCCCCcCCEecccHhHhHHh--hCCCCCCCCCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence            888999999999999999999  56789999888777777765321       112457889999999999999999998


Q ss_pred             -----HHHH--HHHHHhc
Q psy4332         168 -----FTEI--HLFLQRK  178 (188)
Q Consensus       168 -----~~el--~~~l~~~  178 (188)
                           ++++  |+||+.+
T Consensus       283 ~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          283 NLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             SSTTTTHHHHTSGGGTTC
T ss_pred             CccCCHHHHHhCcCcCCC
Confidence                 8999  7888754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=6.5e-31  Score=192.86  Aligned_cols=157  Identities=29%  Similarity=0.587  Sum_probs=128.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++....... ........+++.|+|||.+.
T Consensus       110 ~i~~~i~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  180 (269)
T 4hcu_A          110 GMCLDVCEGMAYLEEACVIHRDLAA--------RNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFS  180 (269)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECGGGCEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeecCCcch--------heEEEcCCCCEEeccccccccccccc-cccccCcccccccCCHHHhc
Confidence            3567888999999999999999999        99999999999999999987664332 12333455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||.+....+....+....      ........+.++.+++.+||+.||++||+
T Consensus       181 ~~~~~~~~Di~slG~~l~~ll~-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps  253 (269)
T 4hcu_A          181 FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGF------RLYKPRLASTHVYQIMNHCWRERPEDRPA  253 (269)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHTTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhhhHHHHHHHHHHhc-CCCCCCCCCCHHHHHHHHhcCc------cCCCCCcCCHHHHHHHHHHccCCcccCcC
Confidence            8899999999999999999995 2789999988777776665321      11223446789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      ++++.+.|+++.+
T Consensus       254 ~~~ll~~l~~l~~  266 (269)
T 4hcu_A          254 FSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988743

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=5.8e-31  Score=197.68  Aligned_cols=157  Identities=38%  Similarity=0.665  Sum_probs=128.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       142 ~i~~qi~~~l~~lH~~~i~H~dikp--------~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (322)
T 1p4o_A          142 QMAGEIADGMAYLNANKFVHRDLAA--------RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  213 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCSCCSG--------GGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCcc--------ceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhc
Confidence            3567899999999999999999999        99999999999999999987665443333334445678899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++|+ +..||.+....+....+.....      .......+.++.+++.+||..||++||+
T Consensus       214 ~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps  286 (322)
T 1p4o_A          214 DGVFTTYSDVWSFGVVLWEIATL-AEQPYQGLSNEQVLRFVMEGGL------LDKPDNCPDMLFELMRMCWQYNPKMRPS  286 (322)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHT-SCCTTTTSCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHhc-CCCccccCCHHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence            88899999999999999999962 6789998887776665543221      1223467889999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++...|+++-
T Consensus       287 ~~e~l~~L~~~~  298 (322)
T 1p4o_A          287 FLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHHHHGGGS
T ss_pred             HHHHHHHHHHhh
Confidence            999999888763

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=3.8e-31  Score=197.78  Aligned_cols=159  Identities=27%  Similarity=0.498  Sum_probs=126.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       149 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  220 (313)
T 1t46_A          149 SFSYQVAKGMAFLASKNCIHRDLAA--------RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCcc--------ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc
Confidence            3567889999999999999999999        99999999999999999988775544333344555678899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||.+...............     ........+.++.+++.+||+.||++||+
T Consensus       221 ~~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps  294 (313)
T 1t46_A          221 NCVYTFESDVWSYGIFLWELFS-LGSSPYPGMPVDSKFYKMIKEGF-----RMLSPEHAPAEMYDIMKTCWDADPLKRPT  294 (313)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TTCCSSTTCCSSHHHHHHHHHTC-----CCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCChHHHHHHHHHHHHHHHh-CCCCCCCcccchhHHHHHhccCC-----CCCCcccCCHHHHHHHHHHcCCCchhCcC
Confidence            8889999999999999999995 26789987654333333222111     11223456789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +.++.+.|+++-+
T Consensus       295 ~~ell~~L~~~~~  307 (313)
T 1t46_A          295 FKQIVQLIEKQIS  307 (313)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999998887643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=9.8e-31  Score=193.31  Aligned_cols=159  Identities=21%  Similarity=0.317  Sum_probs=131.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......    ......+++.|+|||.+.
T Consensus       118 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~  185 (284)
T 2vgo_A          118 TFMEELADALHYCHERKVIHRDIKP--------ENLLMGYKGELKIADFGWSVHAPSL----RRRTMCGTLDYLPPEMIE  185 (284)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECSSS----CBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCH--------HHEEEcCCCCEEEecccccccCccc----ccccccCCCCcCCHHHhc
Confidence            3567889999999999999999999        9999999999999999988655432    123456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++  +|..||......+....+.....       ......+.++.+++.+||..||++||+
T Consensus       186 ~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps  256 (284)
T 2vgo_A          186 GKTHDEKVDLWCAGVLCYEFL--VGMPPFDSPSHTETHRRIVNVDL-------KFPPFLSDGSKDLISKLLRYHPPQRLP  256 (284)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHTTCC-------CCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cCCCCcccchhhHHHHHHHHH--HCCCCCCCCCHhHHHHHHhcccc-------CCCCcCCHHHHHHHHHHhhcCHhhCCC
Confidence            888899999999999999999  56789988877666665543221       112456789999999999999999999


Q ss_pred             HHHH--HHHHHhccCCCCCCCC
Q psy4332         168 FTEI--HLFLQRKNLGYVPPMN  187 (188)
Q Consensus       168 ~~el--~~~l~~~~~~~~~~~~  187 (188)
                      ++++  |+||++......||..
T Consensus       257 ~~~ll~h~~~~~~~~~~~p~~~  278 (284)
T 2vgo_A          257 LKGVMEHPWVKANSRRVLPPVY  278 (284)
T ss_dssp             HHHHHTCHHHHHHCCCCCCCCC
T ss_pred             HHHHhhCHHHHhhccccCCCcc
Confidence            9999  8999988877777653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.6e-31  Score=199.87  Aligned_cols=160  Identities=21%  Similarity=0.214  Sum_probs=124.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+|+.|+|||.+.
T Consensus       116 ~~~~qi~~~l~~lH~~~ivH~Dlkp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~  185 (346)
T 1ua2_A          116 AYMLMTLQGLEYLHQHWILHRDLKP--------NNLLLDENGVLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLF  185 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCEECCCCCH--------HHEEEcCCCCEEEEecccceeccCCc--ccCCcccccccccCchHhh
Confidence            4567888999999999999999999        99999999999999999987764332  2233456788999999997


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc-----C----------------CCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY-----L----------------PTPQ  145 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~----------------~~~~  145 (188)
                      +. .++.++||||+|+++|++++  |..||.+....+....+............     .                ....
T Consensus       186 ~~~~~~~~~DiwslG~il~ell~--g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (346)
T 1ua2_A          186 GARMYGVGVDMWAVGCILAELLL--RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSA  263 (346)
T ss_dssp             TCSCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTT
T ss_pred             CCCCCCchhhhHhHHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhcc
Confidence            54 47889999999999999995  67888888776666555432111111000     0                0134


Q ss_pred             ChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         146 TTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       146 ~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      .+.++.+++.+||..||++|||++|+  |+||++..
T Consensus       264 ~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          264 AGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             CCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             CCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence            56889999999999999999999999  78888653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=2.5e-31  Score=206.64  Aligned_cols=160  Identities=21%  Similarity=0.256  Sum_probs=124.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ++.+|+.|+.|||++||+||||||        +|||++.+ +.+||+|||+++......   ......+|+.|+|||++.
T Consensus       161 ~~~qi~~aL~~LH~~~ivHrDlkp--------~NILl~~~~~~~kl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~  229 (420)
T 1j1b_A          161 YMYQLFRSLAYIHSFGICHRDIKP--------QNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIF  229 (420)
T ss_dssp             HHHHHHHHHHHHHTTTEECSCCSG--------GGEEEETTTTEEEECCCTTCEECCTTC---CCCSCCSCTTSCCHHHHT
T ss_pred             HHHHHHHHHHHHHHCCccccCCCh--------hhEEEeCCCCeEEeccchhhhhcccCC---CceeeeeCCCcCCHHHHc
Confidence            467899999999999999999999        99999955 678999999998764332   123456788999999997


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC--------------ccc--------CCCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE--------------FIY--------LPTP  144 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~--------~~~~  144 (188)
                      +. .++.++||||+||++|||+  +|..||.+....+....+.........              ...        ....
T Consensus       230 ~~~~~~~~~DiwSlG~il~ell--~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  307 (420)
T 1j1b_A          230 GATDYTSSIDVWSAGCVLAELL--LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP  307 (420)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCT
T ss_pred             CCCCCCchhhhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCC
Confidence            65 6899999999999999999  567899988766655554432111100              000        0123


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ..+.++.+|+.+||+.||++||++.|+  |+||+++...
T Consensus       308 ~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          308 RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP  346 (420)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             CCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccc
Confidence            457899999999999999999999999  8899987553

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.97  E-value=2.3e-31  Score=201.91  Aligned_cols=165  Identities=15%  Similarity=0.214  Sum_probs=123.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc--eEEEccCCCCccCCCCcccc-----ccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF--EIKISDFATDSDMFSSDYYR-----VHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~--~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~   80 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++  .+||+|||+++.........     ......++..|
T Consensus       155 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y  226 (345)
T 2v62_A          155 QLGIRMLDVLEYIHENEYVHGDIKA--------ANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEF  226 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTT
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCcCH--------HHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccc
Confidence            4677899999999999999999999        999998877  99999999987764332111     11345688999


Q ss_pred             cchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC--CHHHHHHHhhcccCCCCC--cccCCCCCChHHHHHHHHH
Q psy4332          81 MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL--TDLEVLENISHLHADDGE--FIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        81 ~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~  156 (188)
                      +|||.+.+..++.++||||+|+++|+++|  |..||.+.  ..................  ....+....+.++.+++.+
T Consensus       227 ~aPE~~~~~~~~~~~Di~slG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  304 (345)
T 2v62_A          227 TSLDAHKGVALSRRSDVEILGYCMLRWLC--GKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVC  304 (345)
T ss_dssp             CCHHHHHTCCCCHHHHHHHHHHHHHHHHH--SSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHH
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHh--CCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHH
Confidence            99999998889999999999999999994  67898552  222222111111110111  0111223678899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhccCCC
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRKNLGY  182 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~~~~~  182 (188)
                      ||..||++||+++++.+.|++..-..
T Consensus       305 ~l~~dp~~Rps~~~l~~~L~~~~~~~  330 (345)
T 2v62_A          305 AHSLAYDEKPNYQALKKILNPHGIPL  330 (345)
T ss_dssp             HHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred             HhhcCcccCCCHHHHHHHHhccCCcc
Confidence            99999999999999999999876533

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=3.8e-31  Score=195.29  Aligned_cols=156  Identities=32%  Similarity=0.576  Sum_probs=116.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......+++.|+|||.+.
T Consensus       120 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  190 (281)
T 1mp8_A          120 LYAYQLSTALAYLESKRFVHRDIAA--------RNVLVSSNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESIN  190 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEEETTEEEECC--------------------CCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeecccccH--------HHEEECCCCCEEECccccccccCcccc-cccccCCCcccccChhhcc
Confidence            3467889999999999999999999        999999999999999999877644321 1223344567899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .|..||.+....+....+.....      .......+.++.+++.+||..||++||+
T Consensus       191 ~~~~~~~~Di~slG~~l~ell~-~g~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps  263 (281)
T 1mp8_A          191 FRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNNDVIGRIENGER------LPMPPNCPPTLYSLMTKCWAYDPSRRPR  263 (281)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHT-TSCCTTTTCCGGGHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCCccCchHHHHHHHHHHh-cCCCCCCcCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999995 36789988876666665543211      1123567889999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++.+.|+++-
T Consensus       264 ~~~l~~~l~~~~  275 (281)
T 1mp8_A          264 FTELKAQLSTIL  275 (281)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999998888763

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=2.3e-31  Score=217.28  Aligned_cols=152  Identities=22%  Similarity=0.350  Sum_probs=128.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|||++||+||||||        +|||++.++.+||+|||+++......  .......||+.|+|||++.
T Consensus       446 ~~~~qi~~aL~~LH~~gIiHrDLKp--------~NILl~~~g~ikL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~  515 (674)
T 3pfq_A          446 FYAAEIAIGLFFLQSKGIIYRDLKL--------DNVMLDSEGHIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIA  515 (674)
T ss_dssp             HHHHHHHHHHHHHHHTSEECCCCCS--------TTEEECSSSCEEECCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCeEeccCCh--------hhEEEcCCCcEEEeecceeeccccCC--cccccccCCCcccCHhhhc
Confidence            4577899999999999999999999        99999999999999999987643322  1234567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|||+  +|..||.+.+..++...+.....       .....++.++.+++.+||+.||++||+
T Consensus       516 ~~~~~~~~DvwSlGvilyell--tG~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~  586 (674)
T 3pfq_A          516 YQPYGKSVDWWAFGVLLYEML--AGQAPFEGEDEDELFQSIMEHNV-------AYPKSMSKEAVAICKGLMTKHPGKRLG  586 (674)
T ss_dssp             CCCBSTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHSSCC-------CCCTTSCHHHHHHHHHHSCSSSTTCTT
T ss_pred             CCCCCccceEechHHHHHHHH--cCCCCCCCCCHHHHHHHHHhCCC-------CCCccCCHHHHHHHHHHccCCHHHCCC
Confidence            889999999999999999999  56899999988888887765321       122457889999999999999999999


Q ss_pred             H-----HHH--HHHHHhc
Q psy4332         168 F-----TEI--HLFLQRK  178 (188)
Q Consensus       168 ~-----~el--~~~l~~~  178 (188)
                      +     +|+  |+||+.+
T Consensus       587 ~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          587 CGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             CSTTHHHHHHSSGGGSSC
T ss_pred             CCCCcHHHHhcCccccCC
Confidence            7     888  8888765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=2.9e-31  Score=203.31  Aligned_cols=152  Identities=20%  Similarity=0.265  Sum_probs=125.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+.
T Consensus       143 ~~~~qi~~aL~~LH~~givHrDlkp--------~NIll~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  212 (373)
T 2r5t_A          143 FYAAEIASALGYLHSLNIVYRDLKP--------ENILLDSQGHIVLTDFGLCKENIEHN--STTSTFCGTPEYLAPEVLH  212 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEECCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCH--------HHEEECCCCCEEEeeCccccccccCC--CccccccCCccccCHHHhC
Confidence            3567899999999999999999999        99999999999999999987643222  1234556899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|+||+|+++|+|+  +|..||.+....+....+.....       .....++.++.+++.+||..||++||+
T Consensus       213 ~~~~~~~~DiwslG~il~ell--~G~~Pf~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~li~~lL~~dp~~R~~  283 (373)
T 2r5t_A          213 KQPYDRTVDWWCLGAVLYEML--YGLPPFYSRNTAEMYDNILNKPL-------QLKPNITNSARHLLEGLLQKDRTKRLG  283 (373)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHH--HSSCTTCCSBHHHHHHHHHHSCC-------CCCSSSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             CCCCCchhhhHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHHhccc-------CCCCCCCHHHHHHHHHHcccCHHhCCC
Confidence            888999999999999999999  56789999888777777764321       112457889999999999999999998


Q ss_pred             H----HHH--HHHHHhc
Q psy4332         168 F----TEI--HLFLQRK  178 (188)
Q Consensus       168 ~----~el--~~~l~~~  178 (188)
                      +    .++  |+||+.+
T Consensus       284 ~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          284 AKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             TTTTHHHHHTSGGGTTC
T ss_pred             CCCCHHHHhCCccccCC
Confidence            7    466  7777654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=6e-31  Score=192.89  Aligned_cols=158  Identities=26%  Similarity=0.532  Sum_probs=129.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++........ .......+++.|+|||.+.
T Consensus       108 ~i~~qi~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  178 (268)
T 3sxs_A          108 EMCYDVCEGMAFLESHQFIHRDLAA--------RNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFH  178 (268)
T ss_dssp             HHHHHHHHHHHHHHHTTEEESSCSG--------GGEEECTTCCEEECCTTCEEECCTTCE-EECCSCCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeecCCcCc--------ceEEECCCCCEEEccCccceecchhhh-hcccCCCcCcccCCHHHHh
Confidence            4567889999999999999999999        999999999999999999876654332 2234455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||......+....+....      ........++++.+++.+||+.||++|||
T Consensus       179 ~~~~~~~~Di~slG~il~~l~~-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps  251 (268)
T 3sxs_A          179 YFKYSSKSDVWAFGILMWEVFS-LGKMPYDLYTNSEVVLKVSQGH------RLYRPHLASDTIYQIMYSCWHELPEKRPT  251 (268)
T ss_dssp             HSEEETTHHHHHHHHHHHHHHT-TTCCTTTTSCHHHHHHHHHTTC------CCCCCTTSCHHHHHHHHHTTCSSGGGSCC
T ss_pred             ccCCchhhhhHHHHHHHHHHHc-CCCCCccccChHHHHHHHHcCC------CCCCCCcChHHHHHHHHHHcCCChhhCcC
Confidence            8889999999999999999995 2789999888777666554322      11222445789999999999999999999


Q ss_pred             HHHHHHHHHhccCC
Q psy4332         168 FTEIHLFLQRKNLG  181 (188)
Q Consensus       168 ~~el~~~l~~~~~~  181 (188)
                      +.++.+.|+++.+.
T Consensus       252 ~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          252 FQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHHHHHGGGCC-
T ss_pred             HHHHHHHHHHhhhc
Confidence            99999999998664

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=3.4e-31  Score=198.27  Aligned_cols=158  Identities=29%  Similarity=0.640  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       151 ~i~~qi~~aL~~LH~~~ivH~dikp--------~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  222 (313)
T 3brb_A          151 KFMVDIALGMEYLSNRNFLHRDLAA--------RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA  222 (313)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCCSG--------GGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCc--------ceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhc
Confidence            4567889999999999999999999        99999999999999999987765443333334455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+.........+.....      .......+.++.+++.+||..||++||+
T Consensus       223 ~~~~~~~~Di~slG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps  295 (313)
T 3brb_A          223 DRVYTSKSDVWAFGVTMWEIAT-RGMTPYPGVQNHEMYDYLLHGHR------LKQPEDCLDELYEIMYSCWRTDPLDRPT  295 (313)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCGGGHHHHHHTTCC------CCCBTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             CCCccchhhhHHHHHHHHHHHh-cCCCCCccCCHHHHHHHHHcCCC------CCCCccccHHHHHHHHHHcCCChhhCcC
Confidence            8889999999999999999995 26789988776666655543221      1122456789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +.++...|+++..
T Consensus       296 ~~~l~~~L~~l~~  308 (313)
T 3brb_A          296 FSVLRLQLEKLLE  308 (313)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999998887754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=1e-30  Score=193.00  Aligned_cols=157  Identities=17%  Similarity=0.255  Sum_probs=127.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.   +||+|||++.......   ......+++.|+|||
T Consensus       109 ~~~~~i~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE  177 (284)
T 3kk8_A          109 HCIQQILESIAYCHSNGIVHRNLKP--------ENLLLASKAKGAAVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPE  177 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEESSSSTTCCEEECCCTTCEECCSSC---BCCCSCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHCCcCcCCCCH--------HHEEEecCCCCCcEEEeeceeeEEcccCc---cccCCCCCcCCcCch
Confidence            4567889999999999999999999        9999976654   9999999987665432   223456889999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||+|+++++++  .|..||.+.........+......   .........+.++.+++.+||+.||++
T Consensus       178 ~~~~~~~~~~~Di~slG~~l~~l~--~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~  252 (284)
T 3kk8_A          178 VLKKDPYSKPVDIWACGVILYILL--VGYPPFWDEDQHRLYAQIKAGAYD---YPSPEWDTVTPEAKSLIDSMLTVNPKK  252 (284)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCC---CCTTTTTTSCHHHHHHHHHHSCSSTTT
T ss_pred             hhcCCCCCcccchHHHHHHHHHHH--HCCCCCCCCchhHHHHHHHhcccc---CCchhhcccCHHHHHHHHHHcccChhh
Confidence            999888999999999999999999  567899988877776666543221   112222456889999999999999999


Q ss_pred             CCCHHHH--HHHHHhccC
Q psy4332         165 RPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~  180 (188)
                      |||+.|+  |+||++..+
T Consensus       253 Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          253 RITADQALKVPWICNRER  270 (284)
T ss_dssp             SCCHHHHTTSHHHHSCCC
T ss_pred             CCCHHHHhcCccccCChh
Confidence            9999999  899987644

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=5.9e-31  Score=199.52  Aligned_cols=155  Identities=26%  Similarity=0.391  Sum_probs=113.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++ ++.+||+|||++................||+.|+|||++.
T Consensus       112 ~i~~qi~~al~~lH~~~iiHrDikp--------~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  182 (343)
T 3dbq_A          112 SYWKNMLEAVHTIHQHGIVHSDLKP--------ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK  182 (343)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCc--------ceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHh
Confidence            4567899999999999999999999        999997 5689999999998775443333334566899999999997


Q ss_pred             c-----------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          88 L-----------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        88 ~-----------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      +           ..++.++||||+|+++|+++  +|..||.+... ......+....     .........+.++.+++.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~  255 (343)
T 3dbq_A          183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMT--YGKTPFQQIINQISKLHAIIDPN-----HEIEFPDIPEKDLQDVLK  255 (343)
T ss_dssp             HCC-----------CCHHHHHHHHHHHHHHHH--HSSCTTTTCCSHHHHHHHHHCTT-----SCCCCCCCSCHHHHHHHH
T ss_pred             hccccccccccccCCCchhhHHHHHHHHHHHH--hCCCcchhhhhHHHHHHHHhcCC-----cccCCcccCCHHHHHHHH
Confidence            5           56788999999999999999  56789987543 23333332211     111122345678999999


Q ss_pred             HHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         156 ECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      +||+.||++|||+.|+  |+|++..
T Consensus       256 ~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          256 CCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHcCCChhHCCCHHHHHhCcccccc
Confidence            9999999999999999  8888743

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=7.4e-31  Score=199.21  Aligned_cols=152  Identities=16%  Similarity=0.282  Sum_probs=119.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+.
T Consensus       114 ~~~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~g~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~  183 (345)
T 3a8x_A          114 FYSAEISLALNYLHERGIIYRDLKL--------DNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILR  183 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCH--------HHEEECCCCCEEEEeccccccccCCC--CcccccCCCccccCccccC
Confidence            3567889999999999999999999        99999999999999999987643322  1234567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC---------CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGL---------TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      +..++.++|+||+|+++|+|++  |..||...         ........+....       .......+.++.+++.+||
T Consensus       184 ~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~p~~~s~~~~~li~~lL  254 (345)
T 3a8x_A          184 GEDYGFSVDWWALGVLMFEMMA--GRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------IRIPRSLSVKAASVLKSFL  254 (345)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHH--SSCTTTTTTC-------CHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHT
T ss_pred             CCCCChHHhHHHHHHHHHHHHh--CCCCcCCcccccccccccHHHHHHHHHcCC-------CCCCCCCCHHHHHHHHHHh
Confidence            8889999999999999999994  67888652         1222333333221       1112456889999999999


Q ss_pred             ccCCCCCCCH------HHH--HHHHHhc
Q psy4332         159 KRSPTERPSF------TEI--HLFLQRK  178 (188)
Q Consensus       159 ~~dp~~Rps~------~el--~~~l~~~  178 (188)
                      ..||++||++      +++  |+||+.+
T Consensus       255 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          255 NKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             CSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             cCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999995      677  8888765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.97  E-value=7.9e-31  Score=194.98  Aligned_cols=161  Identities=30%  Similarity=0.596  Sum_probs=127.4

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCCccccchhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~   86 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++..........  ......+++.|+|||.+
T Consensus       133 i~~ql~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  204 (298)
T 3f66_A          133 FGLQVAKGMKYLASKKFVHRDLAA--------RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL  204 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHhCCccCCCCch--------heEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHh
Confidence            456889999999999999999999        99999999999999999988765433211  22344567889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++++++++ +..||.+....+....+....      ........+.++.+++.+||+.||++||
T Consensus       205 ~~~~~~~~~Di~slG~il~~l~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rp  277 (298)
T 3f66_A          205 QTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVNTFDITVYLLQGR------RLLQPEYCPDPLYEVMLKCWHPKAEMRP  277 (298)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTSCTTTHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhC-CCCCCccCCHHHHHHHHhcCC------CCCCCccCCHHHHHHHHHHcCCChhhCc
Confidence            988999999999999999999963 567887776555555444321      1122345678999999999999999999


Q ss_pred             CHHHHHHHHHhccCCCCC
Q psy4332         167 SFTEIHLFLQRKNLGYVP  184 (188)
Q Consensus       167 s~~el~~~l~~~~~~~~~  184 (188)
                      +++++.+.|+++-..+..
T Consensus       278 s~~ell~~L~~~~~~~~~  295 (298)
T 3f66_A          278 SFSELVSRISAIFSTFIG  295 (298)
T ss_dssp             CHHHHHHHHHHHHHTSCC
T ss_pred             CHHHHHHHHHHHHHhhcc
Confidence            999999999988665544

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=8.9e-31  Score=199.43  Aligned_cols=161  Identities=19%  Similarity=0.194  Sum_probs=125.6

Q ss_pred             cccchhhhhhhhc--ccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRN--KNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh--~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ++.+++.++.|+|  ++||+|+||||        +||+++. ++.+||+|||++.......   ......+|+.|+|||.
T Consensus       134 ~~~qi~~al~~lH~~~~~ivH~Dlkp--------~NIll~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~  202 (360)
T 3e3p_A          134 FLFQLIRSIGCLHLPSVNVCHRDIKP--------HNVLVNEADGTLKLCDFGSAKKLSPSE---PNVAYICSRYYRAPEL  202 (360)
T ss_dssp             HHHHHHHHHHHHTSTTTCCBCSCCCG--------GGEEEETTTTEEEECCCTTCBCCCTTS---CCCSTTSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHhCCCCCeecCcCCH--------HHEEEeCCCCcEEEeeCCCceecCCCC---CcccccCCcceeCHHH
Confidence            4668889999999  99999999999        9999996 8999999999988765432   2234567889999999


Q ss_pred             hhcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-------------------------cc
Q psy4332          86 VRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-------------------------FI  139 (188)
Q Consensus        86 ~~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~  139 (188)
                      +.+.. ++.++||||+|+++|+++  +|..||.+.........+.........                         ..
T Consensus       203 ~~~~~~~~~~~Di~slG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (360)
T 3e3p_A          203 IFGNQHYTTAVDIWSVGCIFAEMM--LGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVF  280 (360)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHT
T ss_pred             HcCCCCCCcHHHHHHHHHHHHHHH--hCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCccccc
Confidence            87554 799999999999999999  467899988776665555432111100                         00


Q ss_pred             cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCC
Q psy4332         140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~  182 (188)
                      .......+.++.+++.+||+.||++|||+.|+  |+||+++....
T Consensus       281 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  325 (360)
T 3e3p_A          281 SDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA  325 (360)
T ss_dssp             TTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred             chhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCcc
Confidence            01112357789999999999999999999999  89999886544

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=2.3e-31  Score=207.40  Aligned_cols=157  Identities=20%  Similarity=0.202  Sum_probs=120.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce--EEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE--IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|||++||+||||||        +||+++.++.  +||+|||++......     .....+|+.|+|||+
T Consensus       204 ~i~~qi~~aL~~LH~~~ivHrDlKp--------~NILl~~~~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~  270 (429)
T 3kvw_A          204 KFAHSILQCLDALHKNRIIHCDLKP--------ENILLKQQGRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEV  270 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTEECSCCSG--------GGEEESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHeEEccCCCcceEEeecccceecCCc-----ccccCCCCCccChHH
Confidence            4678899999999999999999999        9999999887  999999998654322     234567889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc---------------------------
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF---------------------------  138 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------  138 (188)
                      +.+..++.++||||+||++|+++|  |..||.+....+....+..........                           
T Consensus       271 ~~~~~~~~~~DiwSlG~il~ellt--G~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (429)
T 3kvw_A          271 ILGARYGMPIDMWSLGCILAELLT--GYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLS  348 (429)
T ss_dssp             HHTBCCCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCC
T ss_pred             HhCCCCCchHHHHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccc
Confidence            998899999999999999999995  578998887666555443221111000                           


Q ss_pred             ----------------ccC---------CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         139 ----------------IYL---------PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       139 ----------------~~~---------~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                                      ...         .....+.++.+|+.+||+.||++|||++|+  |+||++..
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          349 DGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             C--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             cccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence                            000         011236789999999999999999999999  78988653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=9.6e-31  Score=198.19  Aligned_cols=161  Identities=19%  Similarity=0.242  Sum_probs=125.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcc--eEEEccCCCCccCCCCcc--ccccCCCCCCccccchh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF--EIKISDFATDSDMFSSDY--YRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~--~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~Pe   84 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++  .+||+|||++........  ........+++.|+|||
T Consensus       173 i~~qi~~~l~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  244 (345)
T 3hko_A          173 IMRQIFSALHYLHNQGICHRDIKP--------ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE  244 (345)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCG--------GGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHCCccccCCCh--------hhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence            677899999999999999999999        999998766  899999999876533211  11224556889999999


Q ss_pred             hhhc--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          85 SVRL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        85 ~~~~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .+.+  ..++.++||||+|+++|+++  +|..||.+....+....+........   .......+.++.+++.+||+.||
T Consensus       245 ~~~~~~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p  319 (345)
T 3hko_A          245 VLNTTNESYGPKCDAWSAGVLLHLLL--MGAVPFPGVNDADTISQVLNKKLCFE---NPNYNVLSPLARDLLSNLLNRNV  319 (345)
T ss_dssp             HHTCSSSCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCCTT---SGGGGGSCHHHHHHHHHHSCSCT
T ss_pred             hhccCCCCCCcHHHHHHHHHHHHHHH--HCCCCCCCCChHHHHHHHHhcccccC---CcccccCCHHHHHHHHHHcCCCh
Confidence            9975  56888999999999999999  56789998887777666654322111   11113367899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccCCC
Q psy4332         163 TERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~~~  182 (188)
                      ++||++.++  |+||++.....
T Consensus       320 ~~Rps~~~~l~hp~~~~~~~~~  341 (345)
T 3hko_A          320 DERFDAMRALQHPWISQFSDKI  341 (345)
T ss_dssp             TTSCCHHHHHHSHHHHTTSSCS
T ss_pred             hHCCCHHHHhcChhhccChHhh
Confidence            999999999  88999886544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.97  E-value=2.9e-31  Score=200.25  Aligned_cols=158  Identities=30%  Similarity=0.537  Sum_probs=124.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       168 ~~~~qi~~~l~~lH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  239 (333)
T 2i1m_A          168 HFSSQVAQGMAFLASKNCIHRDVAA--------RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF  239 (333)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcccCCccc--------ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhc
Confidence            3557899999999999999999999        99999999999999999987665443333334455678899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+................     .......+.++.+++.+||+.||++||+
T Consensus       240 ~~~~~~~~Di~slG~il~el~t-~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps  313 (333)
T 2i1m_A          240 DCVYTVQSDVWSYGILLWEIFS-LGLNPYPGILVNSKFYKLVKDGYQ-----MAQPAFAPKNIYSIMQACWALEPTHRPT  313 (333)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTT-TSCCSSTTCCSSHHHHHHHHHTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCChHHHHHHHHHHHHHHHc-CCCCCCcccchhHHHHHHHhcCCC-----CCCCCCCCHHHHHHHHHHhccChhhCcC
Confidence            8889999999999999999995 267899876544433333322111     1122345789999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++..+|+++.
T Consensus       314 ~~~l~~~L~~~~  325 (333)
T 2i1m_A          314 FQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999888763

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=1.2e-30  Score=196.24  Aligned_cols=161  Identities=22%  Similarity=0.235  Sum_probs=127.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......++..|+|||.+.
T Consensus       124 ~~~~qi~~~l~~lH~~gi~H~dlkp--------~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  192 (326)
T 1blx_A          124 DMMFQLLRGLDFLHSHRVVHRDLKP--------QNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLL  192 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCH--------HHeEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHh
Confidence            3567889999999999999999999        99999999999999999987664322   234556788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC--------------------cccCCCCCCh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE--------------------FIYLPTPQTT  147 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~  147 (188)
                      +..++.++||||+|+++|+++  +|..||.+.........+.........                    .........+
T Consensus       193 ~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (326)
T 1blx_A          193 QSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID  270 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC
T ss_pred             cCCCCcchhHHHHHHHHHHHH--cCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCC
Confidence            888999999999999999999  567899988776665555432111100                    0011124568


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      .++.+++.+||..||++||++.++  |+||+++...
T Consensus       271 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          271 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence            899999999999999999999999  7899877543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=3.9e-31  Score=202.69  Aligned_cols=155  Identities=21%  Similarity=0.207  Sum_probs=125.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE--cCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV--GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.++.|+|++||+|+||||        +||++  +.++.+||+|||++.......   ......+|+.|+|||.
T Consensus       191 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~  259 (373)
T 2x4f_A          191 LFMKQICEGIRHMHQMYILHLDLKP--------ENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEV  259 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEEEETTTTEEEECCCSSCEECCTTC---BCCCCCSSCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCH--------HHEEEecCCCCcEEEEeCCCceecCCcc---ccccccCCCcEeChhh
Confidence            3467899999999999999999999        99998  566889999999988765432   2234468899999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+|+++|+++  +|..||.+....+....+.........   ......++++.+++.+||..||++|
T Consensus       260 ~~~~~~~~~~DiwslG~il~ell--tg~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dp~~R  334 (373)
T 2x4f_A          260 VNYDFVSFPTDMWSVGVIAYMLL--SGLSPFLGDNDAETLNNILACRWDLED---EEFQDISEEAKEFISKLLIKEKSWR  334 (373)
T ss_dssp             HTTCBCCHHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHTCCCSCS---GGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             ccCCCCCcHHhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhccCCCCh---hhhccCCHHHHHHHHHHcCCChhhC
Confidence            98888899999999999999999  567899998877777766543222111   1124568899999999999999999


Q ss_pred             CCHHHH--HHHHHhc
Q psy4332         166 PSFTEI--HLFLQRK  178 (188)
Q Consensus       166 ps~~el--~~~l~~~  178 (188)
                      |++.|+  |+||++.
T Consensus       335 ps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          335 ISASEALKHPWLSDH  349 (373)
T ss_dssp             CCHHHHHHSHHHHCH
T ss_pred             CCHHHHhcCcCcCCC
Confidence            999999  7788754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=3.5e-32  Score=208.71  Aligned_cols=146  Identities=12%  Similarity=0.060  Sum_probs=115.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++.....     .....| +.|+|||.+.
T Consensus       210 ~i~~qi~~aL~~LH~~~ivHrDikp--------~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~  275 (377)
T 3byv_A          210 QLTLQVIRLLASLHHYGLVHTYLRP--------VDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEA  275 (377)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhc
Confidence            4678999999999999999999999        9999999999999999998764321     123445 7899999998


Q ss_pred             cC-----------CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          88 LR-----------KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        88 ~~-----------~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      +.           .++.++||||||+++|+++|  |..||.+.........+.           ......+.++.+++.+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt--g~~Pf~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~  342 (377)
T 3byv_A          276 RRATISYHRDRRTLMTFSFDAWALGLVIYWIWC--ADLPITKDAALGGSEWIF-----------RSCKNIPQPVRALLEG  342 (377)
T ss_dssp             HHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH--SSCCC------CCSGGGG-----------SSCCCCCHHHHHHHHH
T ss_pred             ccccccccccccccCChhhhHHHHHHHHHHHHH--CCCCCcccccccchhhhh-----------hhccCCCHHHHHHHHH
Confidence            77           78999999999999999995  678987654332222111           1124567899999999


Q ss_pred             HhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         157 CWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       157 cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ||+.||++||++.++  |+||+++.+
T Consensus       343 ~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          343 FLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             HTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             HcCCCchhCCCHHHHhhChHHHHHHH
Confidence            999999999999999  789988754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=1.2e-30  Score=201.06  Aligned_cols=155  Identities=26%  Similarity=0.390  Sum_probs=115.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|+|++||+||||||        +||+++ ++.+||+|||++................||+.|+|||++.
T Consensus       159 ~i~~qi~~aL~~lH~~~ivHrDlkp--------~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  229 (390)
T 2zmd_A          159 SYWKNMLEAVHTIHQHGIVHSDLKP--------ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK  229 (390)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCCCG--------GGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCH--------HHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhh
Confidence            4567899999999999999999999        999995 5789999999998765443322334567899999999987


Q ss_pred             c-----------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          88 L-----------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        88 ~-----------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      +           ..++.++||||+|+++|+|+  +|..||.+... ......+.....     ........+.++.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell--~G~~Pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~  302 (390)
T 2zmd_A          230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMT--YGKTPFQQIINQISKLHAIIDPNH-----EIEFPDIPEKDLQDVLK  302 (390)
T ss_dssp             CC------------CCHHHHHHHHHHHHHHHH--HSSCTTTTCCCHHHHHHHHHCTTS-----CCCCCCCSCHHHHHHHH
T ss_pred             hccccccccccccCCCChhhHHHHHHHHHHHH--HCCCcchhhhHHHHHHHHHhCccc-----cCCCCccchHHHHHHHH
Confidence            5           35788999999999999999  56789987543 333333332111     11112334678999999


Q ss_pred             HHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         156 ECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      +||..||++||++.|+  |+|++..
T Consensus       303 ~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          303 CCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHcccChhhCCCHHHHhhCcCcccc
Confidence            9999999999999999  7888743

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=1.2e-30  Score=198.34  Aligned_cols=150  Identities=22%  Similarity=0.342  Sum_probs=122.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++......      ....+|+.|+|||.+.
T Consensus       158 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          158 AVTHGALQGLAYLHSHNMIHRDVKA--------GNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVIL  223 (348)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSG--------GGEEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCH--------HHEEECCCCCEEEeeccCceecCCC------CcccCCcceeCHhhhc
Confidence            4567889999999999999999999        9999999999999999998765432      2456889999999985


Q ss_pred             ---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 ---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                         ...++.++||||+|+++++++  +|..||.+.........+....     .........+..+.+++.+||+.||++
T Consensus       224 ~~~~~~~~~~~DiwslG~il~ell--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~  296 (348)
T 1u5q_A          224 AMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQNE-----SPALQSGHWSEYFRNFVDSCLQKIPQD  296 (348)
T ss_dssp             TTSSCCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSC-----CCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHHHcccChhh
Confidence               456888999999999999999  5678998887666555554321     112223456889999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      |||++++  |+|+.+.
T Consensus       297 Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          297 RPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             SCCHHHHTTCHHHHSC
T ss_pred             CcCHHHHhhChhhhcc
Confidence            9999999  7888654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=1.7e-31  Score=206.80  Aligned_cols=157  Identities=20%  Similarity=0.295  Sum_probs=128.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++....... .......||+.|+|||++.
T Consensus       172 ~~~~qi~~aL~~LH~~givHrDLKp--------~NILl~~~g~ikL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~  242 (410)
T 3v8s_A          172 FYTAEVVLALDAIHSMGFIHRDVKP--------DNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLK  242 (410)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCCH--------HHeeECCCCCEEEeccceeEeeccCCc-ccccCCcCCccccCHHHhh
Confidence            3567899999999999999999999        999999999999999999987654332 1234567899999999998


Q ss_pred             cCC----CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 LRK----FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~~~----~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      +..    ++.++||||+|+++|+|+  +|..||.+....+....+......   ........++.++.+++.+||..+|+
T Consensus       243 ~~~~~~~~~~~~DiwSlGvilyell--~G~~Pf~~~~~~~~~~~i~~~~~~---~~~p~~~~~s~~~~~li~~lL~~~~~  317 (410)
T 3v8s_A          243 SQGGDGYYGRECDWWSVGVFLYEML--VGDTPFYADSLVGTYSKIMNHKNS---LTFPDDNDISKEAKNLICAFLTDREV  317 (410)
T ss_dssp             TTTTTCEEETHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHTHHHH---CCCCTTCCCCHHHHHHHHHHSSCGGG
T ss_pred             ccCCCcCCCCcceEecchHHHHHHH--hCCCCCCCCChhhHHHHHHhcccc---ccCCCcccccHHHHHHHHHHccChhh
Confidence            655    678999999999999999  567999998888877777643211   11122245788999999999998888


Q ss_pred             C--CCCHHHH--HHHHHhc
Q psy4332         164 E--RPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~--Rps~~el--~~~l~~~  178 (188)
                      +  |++++|+  |+||+.+
T Consensus       318 rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          318 RLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             CTTSSCHHHHHTSGGGCCS
T ss_pred             hCCCCCHHHHhcCccccCC
Confidence            8  9999999  8999876

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=7e-31  Score=198.39  Aligned_cols=155  Identities=32%  Similarity=0.569  Sum_probs=127.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.+
T Consensus       162 i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  233 (334)
T 2pvf_A          162 CTYQLARGMEYLASQKCIHRDLAA--------RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  233 (334)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCcc--------ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcC
Confidence            467889999999999999999999        999999999999999999877654433333344556788999999988


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCCH
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSF  168 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~  168 (188)
                      ..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||++
T Consensus       234 ~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~  306 (334)
T 2pvf_A          234 RVYTHQSDVWSFGVLMWEIFT-LGGSPYPGIPVEELFKLLKEGHR------MDKPANCTNELYMMMRDCWHAVPSQRPTF  306 (334)
T ss_dssp             CEECHHHHHHHHHHHHHHHHT-TSCCSSTTCCHHHHHHHHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCcChHHHHHHHHHHHHHHHh-CCCCCcCcCCHHHHHHHHhcCCC------CCCCccCCHHHHHHHHHHccCChhhCcCH
Confidence            888999999999999999995 26889998887776665543321      11224567899999999999999999999


Q ss_pred             HHHHHHHHhc
Q psy4332         169 TEIHLFLQRK  178 (188)
Q Consensus       169 ~el~~~l~~~  178 (188)
                      .++...|+++
T Consensus       307 ~ell~~L~~l  316 (334)
T 2pvf_A          307 KQLVEDLDRI  316 (334)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9998888766

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.4e-31  Score=200.49  Aligned_cols=154  Identities=20%  Similarity=0.257  Sum_probs=124.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc----eEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++    .+||+|||++.......   ......+|+.|+||
T Consensus       118 ~i~~qi~~al~~lH~~~ivH~Dlkp--------~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aP  186 (326)
T 2y0a_A          118 EFLKQILNGVYYLHSLQIAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAP  186 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESCSSSSSCCEEECCCTTCEECCTTS---CCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHCCeEcCCCCH--------HHEEEecCCCCCCCEEEEECCCCeECCCCC---ccccccCCcCcCCc
Confidence            4567889999999999999999999        999998877    79999999987764332   22345688999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++||||+|+++|+++  +|..||.+....+....+.........   ......+..+.+++.+||..||+
T Consensus       187 E~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~  261 (326)
T 2y0a_A          187 EIVNYEPLGLEADMWSIGVITYILL--SGASPFLGDTKQETLANVSAVNYEFED---EYFSNTSALAKDFIRRLLVKDPK  261 (326)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHH--HSCCSSCCSSHHHHHHHHHHTCCCCCH---HHHTTSCHHHHHHHHHHSCSSGG
T ss_pred             eeecCCCCCcHHHHHHHHHHHHHHH--HCcCCCCCCCHHHHHHHHHhcCCCcCc---cccccCCHHHHHHHHHHccCChh
Confidence            9998888999999999999999999  567899988877766665543221111   11235678899999999999999


Q ss_pred             CCCCHHHH--HHHHHh
Q psy4332         164 ERPSFTEI--HLFLQR  177 (188)
Q Consensus       164 ~Rps~~el--~~~l~~  177 (188)
                      +|||+.|+  |+||+.
T Consensus       262 ~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          262 KRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             GSCCHHHHHHSTTTSC
T ss_pred             hCCCHHHHhcCCCccC
Confidence            99999999  667764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.4e-31  Score=202.39  Aligned_cols=160  Identities=29%  Similarity=0.568  Sum_probs=117.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++.........  ......+++.|+|||.
T Consensus       196 ~i~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~  267 (373)
T 3c1x_A          196 GFGLQVAKGMKFLASKKFVHRDLAA--------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES  267 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECCC---------------------CCGGGSCHHH
T ss_pred             HHHHHHHHHHHHHHHCCEecCccch--------heEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHH
Confidence            3456899999999999999999999        99999999999999999987664332111  1233456778999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||||+++|+++|+ +..||.+....+....+....     . ......++.++.+++.+||..||++|
T Consensus       268 ~~~~~~~~~~DvwSlG~il~ellt~-~~~p~~~~~~~~~~~~~~~~~-----~-~~~p~~~~~~l~~li~~cl~~dp~~R  340 (373)
T 3c1x_A          268 LQTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVNTFDITVYLLQGR-----R-LLQPEYCPDPLYEVMLKCWHPKAEMR  340 (373)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTT-SCCSCTTSCSSCHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHhC-cCCCCCCCCHHHHHHHHHcCC-----C-CCCCCCCCHHHHHHHHHHcCCChhhC
Confidence            9988999999999999999999963 578888766544444443321     1 12234568899999999999999999


Q ss_pred             CCHHHHHHHHHhccCCC
Q psy4332         166 PSFTEIHLFLQRKNLGY  182 (188)
Q Consensus       166 ps~~el~~~l~~~~~~~  182 (188)
                      |++.++++.|+++-...
T Consensus       341 Ps~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          341 PSFSELVSRISAIFSTF  357 (373)
T ss_dssp             CCHHHHHHHHHHHHHTC
T ss_pred             cCHHHHHHHHHHHHHhc
Confidence            99999999988775443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=2.7e-31  Score=204.18  Aligned_cols=160  Identities=20%  Similarity=0.245  Sum_probs=125.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++ .++.+||+|||+++......   ......+++.|+|||.+
T Consensus       145 ~i~~qi~~aL~~LH~~gi~H~Dikp--------~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~  213 (383)
T 3eb0_A          145 IYIYQLFRAVGFIHSLGICHRDIKP--------QNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELM  213 (383)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCCG--------GGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCcCccCccCH--------HHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHh
Confidence            3567899999999999999999999        999997 67899999999988664432   22345678889999998


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC----------------------cccCCC
Q psy4332          87 RLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE----------------------FIYLPT  143 (188)
Q Consensus        87 ~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~  143 (188)
                      .+.. ++.++||||+|+++|+++  +|..||.+....+....+......+..                      ......
T Consensus       214 ~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (383)
T 3eb0_A          214 LGATEYTPSIDLWSIGCVFGELI--LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP  291 (383)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSC
T ss_pred             cCCCCCCcchhhhhHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCC
Confidence            8654 899999999999999999  567999988877666655432221110                      000112


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ...+.++.+++.+||+.||++|||+.|+  |+||++++.
T Consensus       292 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence            3467889999999999999999999999  889987754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=7e-32  Score=204.10  Aligned_cols=152  Identities=18%  Similarity=0.314  Sum_probs=120.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......||+.|+|||.+
T Consensus       111 ~~i~~qi~~aL~~LH~~givH~Dlkp--------~NIll~~~~~~kl~DFG~s~~~~~~~---~~~~~~gt~~y~aPE~~  179 (336)
T 3h4j_B          111 RRFFQQIICAIEYCHRHKIVHRDLKP--------ENLLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI  179 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCCST--------TTEEECTTCCEEECCSSCTBTTTTSB---TTCCCTTSTTTSCGGGS
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCch--------hhEEEcCCCCEEEEEeccceeccCCc---ccccccCCcCcCCHHHH
Confidence            34567899999999999999999999        99999999999999999987765432   23455688999999999


Q ss_pred             hcCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      .+..+ +.++||||+|+++|+++  +|..||.+.........+.       ..........+.++.+++.+||..||++|
T Consensus       180 ~~~~~~~~~~DiwslG~il~~ll--~g~~Pf~~~~~~~~~~~i~-------~~~~~~p~~~s~~~~~li~~~L~~dP~~R  250 (336)
T 3h4j_B          180 NGKLYAGPEVDVWSCGIVLYVML--VGRLPFDDEFIPNLFKKVN-------SCVYVMPDFLSPGAQSLIRRMIVADPMQR  250 (336)
T ss_dssp             CCSGGGCHHHHHHHHHHHHHHHH--HSSCSSBCSSSTTCBCCCC-------SSCCCCCTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             cCCCCCCCccchhHHHHHHHHHH--hCCCCCCCccHHHHHHHHH-------cCCCCCcccCCHHHHHHHHHHcCCChhHC
Confidence            87665 67999999999999999  5678997754322221111       11112234568899999999999999999


Q ss_pred             CCHHHH--HHHHHhc
Q psy4332         166 PSFTEI--HLFLQRK  178 (188)
Q Consensus       166 ps~~el--~~~l~~~  178 (188)
                      ||++|+  |+||+..
T Consensus       251 pt~~eil~hp~~~~~  265 (336)
T 3h4j_B          251 ITIQEIRRDPWFNVN  265 (336)
T ss_dssp             CCHHHHTTCHHHHTT
T ss_pred             cCHHHHHhChhhccC
Confidence            999999  8999854

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.97  E-value=7.5e-32  Score=205.97  Aligned_cols=162  Identities=12%  Similarity=0.143  Sum_probs=120.7

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEc--CcceEEEccCCCCccCCCCcccc-----ccCCCCCCcc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG--KKFEIKISDFATDSDMFSSDYYR-----VHDNTSLPIR   79 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~--~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~   79 (188)
                      ..++.+|+.|+.|+|++||+||||||        +||+++  .++.+||+|||+++.........     ......+|+.
T Consensus       155 ~~i~~qi~~~l~~lH~~~iiHrDlkp--------~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  226 (364)
T 3op5_A          155 LQLSLRILDILEYIHEHEYVHGDIKA--------SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIE  226 (364)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCG--------GGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTT
T ss_pred             HHHHHHHHHHHHHHHHCCeEEecCCH--------HHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCC
Confidence            34677899999999999999999999        999998  88999999999997765432211     1123448899


Q ss_pred             ccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHhh-cccCC--CCCcccCCCCCChHHHHHHHH
Q psy4332          80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT-DLEVLENIS-HLHAD--DGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~-~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~li~  155 (188)
                      |+|||.+.+..++.++||||||+++|+++|  |..||.+.. ......... .....  .......+....+.++.+++.
T Consensus       227 y~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  304 (364)
T 3op5_A          227 FTSIDAHNGVAPSRRGDLEILGYCMIQWLT--GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYME  304 (364)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHH
T ss_pred             ccCHHHhCCCCCCchhhHHHHHHHHHHHHh--CCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHH
Confidence            999999998889999999999999999994  678998532 222111111 00000  000011223566889999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhc
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      .||..||++||++.++.+.|+++
T Consensus       305 ~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          305 TVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             HHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999998877755

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=1.4e-30  Score=205.04  Aligned_cols=152  Identities=18%  Similarity=0.290  Sum_probs=125.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++.......   ......|++.|+|||.+.
T Consensus       120 ~i~~qi~~aL~~LH~~givHrDLkp--------~NIll~~~~~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~  188 (476)
T 2y94_A          120 RLFQQILSGVDYCHRHMVVHRDLKP--------ENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVIS  188 (476)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCSG--------GGEEECTTCCEEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCCCcccccH--------HHEEEecCCCeEEEeccchhhccccc---cccccCCCcCeEChhhcc
Confidence            4567899999999999999999999        99999999999999999988765432   223456889999999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..+ +.++||||+|+++|+++  +|..||.+.........+.....       ......+.++.+++.+||..||++||
T Consensus       189 ~~~~~~~~~DiwSlGvil~ell--tG~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~Li~~~L~~dP~~Rp  259 (476)
T 2y94_A          189 GRLYAGPEVDIWSSGVILYALL--CGTLPFDDDHVPTLFKKICDGIF-------YTPQYLNPSVISLLKHMLQVDPMKRA  259 (476)
T ss_dssp             TCCBCSHHHHHHHHHHHHHHHH--HSSCSSCCSSSHHHHHHHHTTCC-------CCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             CCCCCCCcceehhhHHHHHHHh--hCCCCCCCCCHHHHHHHHhcCCc-------CCCccCCHHHHHHHHHHcCCCchhCc
Confidence            7664 67999999999999999  56789998877777766654321       11234678999999999999999999


Q ss_pred             CHHHH--HHHHHhcc
Q psy4332         167 SFTEI--HLFLQRKN  179 (188)
Q Consensus       167 s~~el--~~~l~~~~  179 (188)
                      |++++  |+||++..
T Consensus       260 t~~eil~hp~~~~~~  274 (476)
T 2y94_A          260 TIKDIREHEWFKQDL  274 (476)
T ss_dssp             CHHHHHTCHHHHTTC
T ss_pred             CHHHHHhCHHhhhcC
Confidence            99999  88998653

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.7e-30  Score=193.05  Aligned_cols=158  Identities=28%  Similarity=0.586  Sum_probs=126.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.........  .......++..|+|||.
T Consensus       128 ~i~~qi~~~l~~LH~~~i~H~dikp--------~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  199 (298)
T 3pls_A          128 SFGLQVARGMEYLAEQKFVHRDLAA--------RNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES  199 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCc--------ceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhh
Confidence            4566889999999999999999999        9999999999999999998766443221  12234556788999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+|+++|+++|+ +..||......+....+.....      .......+.++.+++.+||..||++|
T Consensus       200 ~~~~~~~~~~Di~slG~il~~l~~g-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~R  272 (298)
T 3pls_A          200 LQTYRFTTKSDVWSFGVLLWELLTR-GAPPYRHIDPFDLTHFLAQGRR------LPQPEYCPDSLYQVMQQCWEADPAVR  272 (298)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHT-SCCTTTTSCGGGHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hccCCCChhhchhhHHHHHHHHhhC-CCCCCccCCHHHHHHHhhcCCC------CCCCccchHHHHHHHHHHccCChhhC
Confidence            9988899999999999999999963 4567777666665555543221      12234567899999999999999999


Q ss_pred             CCHHHHHHHHHhccC
Q psy4332         166 PSFTEIHLFLQRKNL  180 (188)
Q Consensus       166 ps~~el~~~l~~~~~  180 (188)
                      ||++++.+.|+++..
T Consensus       273 ps~~~ll~~l~~~~~  287 (298)
T 3pls_A          273 PTFRVLVGEVEQIVS  287 (298)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHH
Confidence            999999988887744

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=4.9e-31  Score=205.70  Aligned_cols=169  Identities=21%  Similarity=0.329  Sum_probs=118.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-------------------
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-------------------   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------   68 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++........                   
T Consensus       133 ~i~~qil~aL~~LH~~givHrDlkp--------~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (432)
T 3n9x_A          133 TILYNLLLGENFIHESGIIHRDLKP--------ANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL  204 (432)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEEC-------------------------
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCH--------HHeEECCCCCEEEccCCCcccccccccccccccccccccccccccch
Confidence            4567899999999999999999999        9999999999999999998876433211                   


Q ss_pred             -cccCCCCCCccccchhhhh-cCCCCChhhHHHHHHHHHHHHhC---------CCCCCCCCCC-----------------
Q psy4332          69 -RVHDNTSLPIRWMAWESVR-LRKFTTKSDVWSFGVTLWEILNL---------ARHRPYEGLT-----------------  120 (188)
Q Consensus        69 -~~~~~~~~~~~~~~Pe~~~-~~~~~~~~di~slG~~~~~l~t~---------~~~~p~~~~~-----------------  120 (188)
                       .......+|+.|+|||++. +..++.++||||+||++|||++|         .+..+|.+..                 
T Consensus       205 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~  284 (432)
T 3n9x_A          205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKS  284 (432)
T ss_dssp             ------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHH
T ss_pred             hccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccc
Confidence             1124556789999999874 55689999999999999999953         1344444432                 


Q ss_pred             HHHHHHHhhcccCCCCC------------------------cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHH
Q psy4332         121 DLEVLENISHLHADDGE------------------------FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLF  174 (188)
Q Consensus       121 ~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~  174 (188)
                      .......+......+..                        ......+..++++.+|+.+||..||++|||++|+  |+|
T Consensus       285 ~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  364 (432)
T 3n9x_A          285 NRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPY  364 (432)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGG
T ss_pred             hHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChh
Confidence            01112112111111100                        0000114568899999999999999999999999  899


Q ss_pred             HHhccCCCCC
Q psy4332         175 LQRKNLGYVP  184 (188)
Q Consensus       175 l~~~~~~~~~  184 (188)
                      |+++......
T Consensus       365 f~~~~~~~~e  374 (432)
T 3n9x_A          365 LKDVRKKKLE  374 (432)
T ss_dssp             GTTTCCTTTC
T ss_pred             hhhccCcccC
Confidence            9988665443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=5.6e-31  Score=198.52  Aligned_cols=151  Identities=20%  Similarity=0.325  Sum_probs=121.1

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||+++......  .......|++.|+|||.+.+
T Consensus       126 ~~~qi~~al~~lH~~~ivH~Dlkp--------~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~  195 (327)
T 3a62_A          126 YLAEISMALGHLHQKGIIYRDLKP--------ENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMR  195 (327)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCT--------TTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCEEcccCCH--------HHeEECCCCcEEEEeCCcccccccCC--ccccccCCCcCccCHhhCcC
Confidence            567889999999999999999999        99999999999999999987643322  12234568899999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC--
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP--  166 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp--  166 (188)
                      ..++.++||||+|+++|+++  +|..||.+....+....+.....       ......+.++.+++.+||..||++||  
T Consensus       196 ~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dp~~R~~~  266 (327)
T 3a62_A          196 SGHNRAVDWWSLGALMYDML--TGAPPFTGENRKKTIDKILKCKL-------NLPPYLTQEARDLLKKLLKRNAASRLGA  266 (327)
T ss_dssp             SCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHTCC-------CCCTTSCHHHHHHHHHHSCSCGGGSTTS
T ss_pred             CCCCCcccchhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhCCC-------CCCCCCCHHHHHHHHHHHhcCHhhccCC
Confidence            88999999999999999999  56789998887777766654321       11245678999999999999999999  


Q ss_pred             ---CHHHH--HHHHHhc
Q psy4332         167 ---SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ---s~~el--~~~l~~~  178 (188)
                         ++.++  |+||+.+
T Consensus       267 ~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          267 GPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             STTTHHHHHHSGGGSSC
T ss_pred             CCCCHHHHHcCCcccCC
Confidence               78888  7888754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=7.4e-31  Score=199.44  Aligned_cols=162  Identities=18%  Similarity=0.198  Sum_probs=123.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc--ccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY--YRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ........+|+.|+|||.
T Consensus       128 ~i~~qi~~~l~~LH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  199 (351)
T 3mi9_A          128 RVMQMLLNGLYYIHRNKILHRDMKA--------ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL  199 (351)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeCCCCCH--------HHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchh
Confidence            4567889999999999999999999        999999999999999999876643221  122244567899999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCC----------------C----
Q psy4332          86 VRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT----------------P----  144 (188)
Q Consensus        86 ~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----  144 (188)
                      +.+. .++.++||||+|+++|+++  +|..||.+.........+...............                .    
T Consensus       200 ~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (351)
T 3mi9_A          200 LLGERDYGPPIDLWGAGCIMAEMW--TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD  277 (351)
T ss_dssp             HTTCCSCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHH
T ss_pred             hcCCCCCCcHhHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHH
Confidence            8764 4799999999999999999  467899988776666555432221111110000                0    


Q ss_pred             -----CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         145 -----QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       145 -----~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                           ..+.++.+++.+||+.||++|||++|+  |+||++..
T Consensus       278 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          278 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             HHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             HhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence                 014678999999999999999999999  88997643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=2e-31  Score=203.09  Aligned_cols=154  Identities=22%  Similarity=0.255  Sum_probs=118.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-------------------------cceEEEccCCCCccC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-------------------------KFEIKISDFATDSDM   62 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-------------------------~~~~kl~dfg~~~~~   62 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.                         ++.+||+|||++...
T Consensus       141 ~i~~qi~~aL~~LH~~~ivHrDlkp--------~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~  212 (360)
T 3llt_A          141 LYCIEILKALNYLRKMSLTHTDLKP--------ENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK  212 (360)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCc--------ccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceec
Confidence            3567899999999999999999999        8888864                         778999999998764


Q ss_pred             CCCccccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----
Q psy4332          63 FSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----  137 (188)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----  137 (188)
                      ...     .....+|+.|+|||.+.+..++.++||||+|+++|+++  +|..||.+....+....+.........     
T Consensus       213 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~  285 (360)
T 3llt_A          213 SDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY--TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYE  285 (360)
T ss_dssp             TSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             CCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH--HCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhh
Confidence            332     23456789999999999889999999999999999999  567899887766655544332211110     


Q ss_pred             ---------------cccCCC-------------------CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHH
Q psy4332         138 ---------------FIYLPT-------------------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       138 ---------------~~~~~~-------------------~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~  176 (188)
                                     ....+.                   ...++++.+++.+||+.||++|||++|+  |+||+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          286 ATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                           000000                   0113678899999999999999999999  77764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=4.8e-31  Score=198.81  Aligned_cols=156  Identities=21%  Similarity=0.305  Sum_probs=124.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.   ++.+||+|||++.......   ......+++.|+|||
T Consensus       135 ~i~~ql~~~L~~LH~~givH~Dikp--------~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE  203 (327)
T 3lm5_A          135 RLIKQILEGVYYLHQNNIVHLDLKP--------QNILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPE  203 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHCCeecCcCCh--------HHEEEecCCCCCcEEEeeCccccccCCcc---ccccccCCcCccCCe
Confidence            4567889999999999999999999        9999987   7899999999987764332   223456889999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+....+....+.....   ..........+..+.+++.+||+.||++
T Consensus       204 ~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~  278 (327)
T 3lm5_A          204 ILNYDPITTATDMWNIGIIAYMLL--THTSPFVGEDNQETYLNISQVNV---DYSEETFSSVSQLATDFIQSLLVKNPEK  278 (327)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCC---CCCTTTTTTSCHHHHHHHHHHSCSSGGG
T ss_pred             eecCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCchHHHHHHHhccc---ccCchhhcccCHHHHHHHHHHcCCChhh
Confidence            999888999999999999999999  56789998887776665544322   1122223457889999999999999999


Q ss_pred             CCCHHHH--HHHHHhcc
Q psy4332         165 RPSFTEI--HLFLQRKN  179 (188)
Q Consensus       165 Rps~~el--~~~l~~~~  179 (188)
                      |||++++  |+||++++
T Consensus       279 Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          279 RPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             SCCHHHHTTCGGGCCCC
T ss_pred             CcCHHHHhCCHhhcccc
Confidence            9999999  88998763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=3.1e-31  Score=202.83  Aligned_cols=159  Identities=17%  Similarity=0.173  Sum_probs=116.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.++.+||+|||+++.....     .....+|..|+|||.+.
T Consensus       136 ~i~~qi~~aL~~LH~~givH~Dlkp--------~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~  202 (367)
T 2fst_X          136 FLIYQILRGLKYIHSADIIHRDLKP--------SNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIML  202 (367)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECC--------------------CCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCH--------hhEEECCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHc
Confidence            3567889999999999999999999        9999999999999999998765432     23446788899999998


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc------------------------ccCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF------------------------IYLP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~  142 (188)
                      + ..++.++||||+||++++++  +|..||.+.........+......+...                        ....
T Consensus       203 ~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (367)
T 2fst_X          203 NWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV  280 (367)
T ss_dssp             TCCSCCTTHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHH
T ss_pred             CCcCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHH
Confidence            6 56889999999999999999  5678999887766655554322211100                        0000


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      .+..+.++.+|+.+||..||++|||+.|+  |+||++....
T Consensus       281 ~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          281 FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP  321 (367)
T ss_dssp             TTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred             CCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCC
Confidence            12456789999999999999999999999  8899977553

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.97  E-value=3.4e-31  Score=197.07  Aligned_cols=161  Identities=23%  Similarity=0.339  Sum_probs=117.5

Q ss_pred             ccccchhhhhhhhc--------ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCC
Q psy4332           8 PQASNLAVVPLLRN--------KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh--------~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~   77 (188)
                      .++.+++.|+.|+|        ++||+|+||||        +||+++.++.+||+|||++..........  ......+|
T Consensus       109 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp--------~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  180 (301)
T 3q4u_A          109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS--------KNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT  180 (301)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCG--------GGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhhccCCCCeecCCCCh--------HhEEEcCCCCEEEeeCCCeeecccccccccccccccccc
Confidence            45678999999999        99999999999        99999999999999999987654332211  12344689


Q ss_pred             ccccchhhhhcC------CCCChhhHHHHHHHHHHHHhCC--------CCCCCCCCC----HHHHHHHhhcccCCCCCcc
Q psy4332          78 IRWMAWESVRLR------KFTTKSDVWSFGVTLWEILNLA--------RHRPYEGLT----DLEVLENISHLHADDGEFI  139 (188)
Q Consensus        78 ~~~~~Pe~~~~~------~~~~~~di~slG~~~~~l~t~~--------~~~p~~~~~----~~~~~~~~~~~~~~~~~~~  139 (188)
                      +.|+|||.+.+.      .++.++||||+|+++|+++|+.        +..||.+..    ............   ....
T Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~---~~~~  257 (301)
T 3q4u_A          181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD---QQRP  257 (301)
T ss_dssp             GGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS---CCCC
T ss_pred             cceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhcc---CCCC
Confidence            999999999865      3446899999999999999541        166775432    112222222111   1111


Q ss_pred             cCC----CCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhcc
Q psy4332         140 YLP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       140 ~~~----~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                      ..+    ....+.++.+++.+||+.||++|||+.++.+.|++++
T Consensus       258 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  301 (301)
T 3q4u_A          258 NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID  301 (301)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence            111    1224578999999999999999999999999998863

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=1.5e-30  Score=191.88  Aligned_cols=153  Identities=26%  Similarity=0.359  Sum_probs=123.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++......    ......+++.|+|||.+.
T Consensus       113 ~~~~qi~~~l~~LH~~~i~H~dlkp--------~Nili~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~  180 (279)
T 3fdn_A          113 TYITELANALSYCHSKRVIHRDIKP--------ENLLLGSAGELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIE  180 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTCEECCCCG--------GGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCEecccCCh--------HhEEEcCCCCEEEEeccccccCCcc----cccccCCCCCccCHhHhc
Confidence            4567889999999999999999999        9999999999999999987554332    223446788899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++  +|..||......+....+.....       ......+.++.+++.+||..||++||+
T Consensus       181 ~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps  251 (279)
T 3fdn_A          181 GRMHDEKVDLWSLGVLCYEFL--VGKPPFEANTYQETYKRISRVEF-------TFPDFVTEGARDLISRLLKHNPSQRPM  251 (279)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHTCC-------CCCTTSCHHHHHHHHHHCCSSGGGSCC
T ss_pred             cCCCCccchhHhHHHHHHHHH--HCCCCCCCCcHHHHHHHHHhCCC-------CCCCcCCHHHHHHHHHHhccChhhCCC
Confidence            888899999999999999999  56789998887776666543221       112346789999999999999999999


Q ss_pred             HHHH--HHHHHhccCC
Q psy4332         168 FTEI--HLFLQRKNLG  181 (188)
Q Consensus       168 ~~el--~~~l~~~~~~  181 (188)
                      ++|+  |+||+...+.
T Consensus       252 ~~e~l~h~~~~~~~~~  267 (279)
T 3fdn_A          252 LREVLEHPWITANSSK  267 (279)
T ss_dssp             HHHHHHCHHHHHHCSS
T ss_pred             HHHHhhCccccCCccC
Confidence            9999  8999977553

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=1.1e-30  Score=198.77  Aligned_cols=155  Identities=21%  Similarity=0.270  Sum_probs=121.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.++.|+|++||+|+||||        +||+++.++.   +||+|||++.......  .......+|+.|+|||
T Consensus       134 ~i~~qi~~al~~lH~~~ivHrDlkp--------~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE  203 (351)
T 3c0i_A          134 HYMRQILEALRYCHDNNIIHRDVKP--------HCVLLASKENSAPVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPE  203 (351)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECSSSTTCCEEECCCTTCEECCTTS--CBCCCCCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCh--------HHeEEecCCCCCcEEEecCcceeEecCCC--eeecCCcCCcCccCHH
Confidence            3567899999999999999999999        9999976544   9999999987765432  1234556899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+.. ......+.........   ......+.++.+++.+||..||++
T Consensus       204 ~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~-~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~  277 (351)
T 3c0i_A          204 VVKREPYGKPVDVWGCGVILFILL--SGCLPFYGTK-ERLFEGIIKGKYKMNP---RQWSHISESAKDLVRRMLMLDPAE  277 (351)
T ss_dssp             HHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSCSSH-HHHHHHHHHTCCCCCH---HHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             HHcCCCCCchHhhHHHHHHHHHHH--HCCCCCCCcH-HHHHHHHHcCCCCCCc---cccccCCHHHHHHHHHHCCCChhH
Confidence            999888999999999999999999  5678998754 3444444332211111   111356789999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      ||++.++  |+||++.
T Consensus       278 R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          278 RITVYEALNHPWLKER  293 (351)
T ss_dssp             SCCHHHHHTSHHHHTH
T ss_pred             CcCHHHHhcChhhcCC
Confidence            9999999  7898864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=4e-31  Score=202.50  Aligned_cols=158  Identities=16%  Similarity=0.175  Sum_probs=115.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+|+.|+|||.+.
T Consensus       131 ~i~~qi~~al~~lH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~  199 (371)
T 2xrw_A          131 YLLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVIL  199 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECCCCC-------------------CTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeecccCCH--------HHEEEcCCCCEEEEEeeccccccccc---ccCCceecCCccCHHHhc
Confidence            4567899999999999999999999        99999999999999999987654321   223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc----------------cc-----------
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF----------------IY-----------  140 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------~~-----------  140 (188)
                      +..++.++||||+|+++|+++  +|..||.+....+....+..........                ..           
T Consensus       200 ~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (371)
T 2xrw_A          200 GMGYKENVDIWSVGCIMGEMI--KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP  277 (371)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSC
T ss_pred             CCCCCchHhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcc
Confidence            888999999999999999999  5678999888766666554322211000                00           


Q ss_pred             ---CCCC-----CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         141 ---LPTP-----QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       141 ---~~~~-----~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                         .+..     ..+.++.+++.+||+.||++|||++|+  |+||+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          278 DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             GGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             cccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence               0000     015678999999999999999999999  8899854

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=1.7e-30  Score=191.88  Aligned_cols=156  Identities=26%  Similarity=0.520  Sum_probs=127.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++....... ........+++.|+|||.+.
T Consensus       124 ~i~~qi~~~l~~lH~~~i~H~dikp--------~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  194 (283)
T 3gen_A          124 EMCKDVCEAMEYLESKQFLHRDLAA--------RNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM  194 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCSG--------GGEEECTTSCEEECSTTGGGGBCCHH-HHSTTSTTSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCCCcc--------ceEEEcCCCCEEEccccccccccccc-cccccCCccCcccCCHHHhc
Confidence            4567889999999999999999999        99999999999999999987664332 12233445678899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||......+....+.....      .......++.+.+++.+||+.||++||+
T Consensus       195 ~~~~~~~~Dv~slG~~l~~l~t-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps  267 (283)
T 3gen_A          195 YSKFSSKSDIWAFGVLMWEIYS-LGKMPYERFTNSETAEHIAQGLR------LYRPHLASEKVYTIMYSCWHEKADERPT  267 (283)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHT-TTCCTTTTSCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCCccccChhHHHHHHhcccC------CCCCCcCCHHHHHHHHHHccCChhHCcC
Confidence            8889999999999999999994 27899999887777766654321      1222455789999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +++++..|+++-
T Consensus       268 ~~~ll~~L~~~~  279 (283)
T 3gen_A          268 FKILLSNILDVM  279 (283)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999998888763

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=8.1e-31  Score=205.42  Aligned_cols=154  Identities=29%  Similarity=0.497  Sum_probs=125.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||++||+||||||        +||+++.++.+||+|||+++......     ....++..|+|||.+.
T Consensus       293 ~~~~qi~~~l~~LH~~~ivHrDlkp--------~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~  359 (450)
T 1k9a_A          293 KFSLDVCEAMEYLEGNNFVHRDLAA--------RNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALR  359 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCH--------hhEEECCCCCEEEeeCCCcccccccc-----cCCCCCcceeCHHHhc
Confidence            4677899999999999999999999        99999999999999999987543221     2234567899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++||++| .|..||.+....+....+....     . ......++.++.+++.+||..||++|||
T Consensus       360 ~~~~~~~sDvwslG~~l~el~t-~g~~P~~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~l~~li~~cl~~dp~~Rpt  432 (450)
T 1k9a_A          360 EKKFSTKSDVWSFGILLWEIYS-FGRVPYPRIPLKDVVPRVEKGY-----K-MDAPDGCPPAVYDVMKNCWHLDAATRPT  432 (450)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHT-TTCCSSTTSCTTTHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCC-----C-CCCCCcCCHHHHHHHHHHcCCChhHCcC
Confidence            8899999999999999999995 2688998877666665554321     1 1123467889999999999999999999


Q ss_pred             HHHHHHHHHhccCC
Q psy4332         168 FTEIHLFLQRKNLG  181 (188)
Q Consensus       168 ~~el~~~l~~~~~~  181 (188)
                      +.++...|+++...
T Consensus       433 ~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          433 FLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999987654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=1.1e-30  Score=200.17  Aligned_cols=156  Identities=27%  Similarity=0.522  Sum_probs=116.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||+++......... ......++..|+|||.+
T Consensus       151 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~  222 (373)
T 2qol_A          151 GMLRGIASGMKYLSDMGYVHRDLAA--------RNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI  222 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECCC----------------------CTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeCCCCCc--------ceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhh
Confidence            4577899999999999999999999        99999999999999999987764332111 11223346679999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|++++ .|..||.+....+....+....      ........+.++.+++.+||+.||++||
T Consensus       223 ~~~~~~~~~Dv~SlG~il~ellt-~g~~P~~~~~~~~~~~~i~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~RP  295 (373)
T 2qol_A          223 AYRKFTSASDVWSYGIVLWEVMS-YGERPYWEMSNQDVIKAVDEGY------RLPPPMDCPAALYQLMLDCWQKDRNNRP  295 (373)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TC-CTTTTCCHHHHHHHHHTTE------ECCCCTTCBHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCcCchhcHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCC------CCCCCccccHHHHHHHHHHhCcChhhCc
Confidence            98899999999999999999995 3789999888777666654321      1122345788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.+++..|+++
T Consensus       296 s~~~i~~~L~~~  307 (373)
T 2qol_A          296 KFEQIVSILDKL  307 (373)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998888876

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=3.1e-30  Score=192.30  Aligned_cols=156  Identities=21%  Similarity=0.226  Sum_probs=126.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................++..|+|||.+.
T Consensus       113 ~~~~qi~~al~~LH~~~i~H~dlkp--------~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (305)
T 2wtk_C          113 GYFCQLIDGLEYLHSQGIVHKDIKP--------GNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN  184 (305)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCc--------ccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhcc
Confidence            3567889999999999999999999        99999999999999999987664332223334556889999999997


Q ss_pred             cCCC--CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKF--TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~--~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +...  +.++||||+|+++|+++  +|..||.+....+....+.....       ......+.++.+++.+||..||++|
T Consensus       185 ~~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~i~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~R  255 (305)
T 2wtk_C          185 GLDTFSGFKVDIWSAGVTLYNIT--TGLYPFEGDNIYKLFENIGKGSY-------AIPGDCGPPLSDLLKGMLEYEPAKR  255 (305)
T ss_dssp             CCSCEESHHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHCCC-------CCCSSSCHHHHHHHHHHTCSSTTTS
T ss_pred             CcccCCcchhhHHHHHHHHHHHH--hCCCCCCCchHHHHHHHHhcCCC-------CCCCccCHHHHHHHHHHccCChhhC
Confidence            6443  67999999999999999  56789998877776666654321       1224567899999999999999999


Q ss_pred             CCHHHH--HHHHHhccC
Q psy4332         166 PSFTEI--HLFLQRKNL  180 (188)
Q Consensus       166 ps~~el--~~~l~~~~~  180 (188)
                      |+++++  |+||++...
T Consensus       256 ps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          256 FSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             CCHHHHHHSHHHHSCCC
T ss_pred             CCHHHHhcCcccccCCC
Confidence            999999  789987644

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=4.1e-31  Score=203.50  Aligned_cols=163  Identities=17%  Similarity=0.267  Sum_probs=118.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-----ccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-----VHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~   82 (188)
                      .++.+|+.|+.|||++||+||||||        +||+++.++.+||+|||.+......+...     ......+++.|+|
T Consensus       132 ~~~~qi~~~l~~LH~~~ivHrDlkp--------~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  203 (389)
T 3gni_B          132 YILQGVLKALDYIHHMGYVHRSVKA--------SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS  203 (389)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSC
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccC
Confidence            4567899999999999999999999        99999999999999999876553322111     1123467888999


Q ss_pred             hhhhhc--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC-------------------------
Q psy4332          83 WESVRL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD-------------------------  135 (188)
Q Consensus        83 Pe~~~~--~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~-------------------------  135 (188)
                      ||.+.+  ..++.++||||+||++|+++  +|..||.+.................                         
T Consensus       204 PE~~~~~~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (389)
T 3gni_B          204 PEVLQQNLQGYDAKSDIYSVGITACELA--NGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGL  281 (389)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHHHHHHH--HSSCTTTTCCSTTHHHHC--------------------------------
T ss_pred             HHHHhccCCCCCcHhHHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccc
Confidence            999987  56889999999999999999  4678998765433332221110000                         


Q ss_pred             --------------CCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         136 --------------GEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       136 --------------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                                    ..........++.++.+|+.+||+.||++|||++|+  |+||+++..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          282 SDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             ccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence                          000001123457889999999999999999999999  889998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.97  E-value=8.8e-31  Score=196.04  Aligned_cols=155  Identities=30%  Similarity=0.525  Sum_probs=123.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.+
T Consensus       153 ~~~qi~~al~~lH~~~i~H~dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  224 (316)
T 2xir_A          153 YSFQVAKGMEFLASRKCIHRDLAA--------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  224 (316)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCcccccCcc--------ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc
Confidence            456899999999999999999999        999999999999999999877654433333344556788999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      ..++.++||||+|+++|+++| .|..||.+... ......+....     . .......+.++.+++.+||..||++||+
T Consensus       225 ~~~~~~~Di~slG~il~~l~t-~g~~p~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~li~~~l~~dp~~Rps  297 (316)
T 2xir_A          225 RVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKIDEEFCRRLKEGT-----R-MRAPDYTTPEMYQTMLDCWHGEPSQRPT  297 (316)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCCSHHHHHHHHHTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccccchhHHHHHHHHHHHHHh-CCCCCCcccchhHHHHHHhccCc-----c-CCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            889999999999999999995 26789887653 33333332211     1 1122446789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       298 ~~ell~~L~~~  308 (316)
T 2xir_A          298 FSELVEHLGNL  308 (316)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998888866

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=7.9e-31  Score=197.77  Aligned_cols=158  Identities=20%  Similarity=0.247  Sum_probs=121.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-------------------cceEEEccCCCCccCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-------------------KFEIKISDFATDSDMFSSDYY   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-------------------~~~~kl~dfg~~~~~~~~~~~   68 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.                   ++.+||+|||++......   
T Consensus       122 ~~~~qi~~~l~~lH~~~ivH~Dlkp--------~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  190 (339)
T 1z57_A          122 KMAYQICKSVNFLHSNKLTHTDLKP--------ENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH---  190 (339)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC---
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCH--------HHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc---
Confidence            4677899999999999999999999        9999876                   567999999998764322   


Q ss_pred             cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----------
Q psy4332          69 RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----------  137 (188)
Q Consensus        69 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  137 (188)
                        .....+|+.|+|||.+.+..++.++||||+|+++|+++  +|..||......+....+.........           
T Consensus       191 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  266 (339)
T 1z57_A          191 --HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY--LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKY  266 (339)
T ss_dssp             --CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHH--HSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGG
T ss_pred             --cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhH
Confidence              23456788999999999888999999999999999999  567888887765544433221111000           


Q ss_pred             --------------------------cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         138 --------------------------FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       138 --------------------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                                                .........++++.+++.+||+.||++|||+.|+  |+||+++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          267 FHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             HhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence                                      0001112235779999999999999999999999  899998765

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=4.9e-31  Score=201.46  Aligned_cols=163  Identities=20%  Similarity=0.206  Sum_probs=124.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......... ......+|+.|+|||.+
T Consensus       132 ~i~~qi~~aL~~LH~~~ivH~Dikp--------~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  203 (364)
T 3qyz_A          132 YFLYQILRGLKYIHSANVLHRDLKP--------SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  203 (364)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCh--------HhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHh
Confidence            4567899999999999999999999        99999999999999999987665432211 12345689999999987


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC------------------------cccC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE------------------------FIYL  141 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~  141 (188)
                      .+. .++.++||||+|+++|+++|  |..||.+....+....+.........                        ....
T Consensus       204 ~~~~~~~~~~DiwslG~il~ell~--g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (364)
T 3qyz_A          204 LNSKGYTKSIDIWSVGCILAEMLS--NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR  281 (364)
T ss_dssp             HTBCSCSTHHHHHHHHHHHHHHHH--SSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHH
T ss_pred             cCCCCCCcchhHHHHHHHHHHHHH--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHH
Confidence            654 48999999999999999995  67899887655554444321111100                        0000


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ..+..+.++.+++.+||+.||++|||+.|+  |+||++...
T Consensus       282 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          282 LFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             hCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence            113467889999999999999999999999  889987644

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=3e-31  Score=199.69  Aligned_cols=156  Identities=21%  Similarity=0.317  Sum_probs=121.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+|+.|+|||.+.
T Consensus       109 ~i~~qi~~aL~~LH~~givH~Dlkp--------~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  180 (323)
T 3tki_A          109 RFFHQLMAGVVYLHGIGITHRDIKP--------ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  180 (323)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccccccch--------HHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc
Confidence            4567889999999999999999999        99999999999999999987665443333345667899999999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..+ +.++||||+|+++|+++  +|..||...... .........     .....+....+.++.+++.+||+.||++|
T Consensus       181 ~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~R  253 (323)
T 3tki_A          181 RREFHAEPVDVWSCGIVLTAML--AGELPWDQPSDSCQEYSDWKEK-----KTYLNPWKKIDSAPLALLHKILVENPSAR  253 (323)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHH--HSSCSCSSSCTTSHHHHHHHTT-----CTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCCCCCCcccHHHHHHHHHHHH--hCCCCCCCCchHHHHHHHHhcc-----cccCCccccCCHHHHHHHHHHccCChhhC
Confidence            7665 67899999999999999  467898765432 222222211     11112224567899999999999999999


Q ss_pred             CCHHHH--HHHHHhc
Q psy4332         166 PSFTEI--HLFLQRK  178 (188)
Q Consensus       166 ps~~el--~~~l~~~  178 (188)
                      ||++|+  |+||++.
T Consensus       254 ~t~~eil~h~~~~~~  268 (323)
T 3tki_A          254 ITIPDIKKDRWYNKP  268 (323)
T ss_dssp             CCHHHHTTCTTTTCC
T ss_pred             cCHHHHhhChhhccc
Confidence            999999  7888754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=9.5e-31  Score=207.20  Aligned_cols=156  Identities=33%  Similarity=0.606  Sum_probs=127.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||++||+||||||        +||+++.++.+||+|||+++...... ........++..|+|||.+.
T Consensus       322 ~i~~qi~~~L~~LH~~~ivHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~  392 (495)
T 1opk_A          322 YMATQISSAMEYLEKKNFIHRNLAA--------RNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLA  392 (495)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECGGGCEEECCTTCEECCTTCC-EECCTTCCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCh--------hhEEECCCCcEEEeecccceeccCCc-eeecCCCcCCcceeCHhHHh
Confidence            3567899999999999999999999        99999999999999999988764322 22334455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|+++| .|..||.+....+....+....     . ......++.++.+++.+||+.||++||+
T Consensus       393 ~~~~~~~sDvwSlG~~l~el~t-~g~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~li~~cl~~dP~~RPs  465 (495)
T 1opk_A          393 YNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDY-----R-MERPEGCPEKVYELMRACWQWNPSDRPS  465 (495)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHT-TSCCSSTTCCGGGHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCcHHhHHhHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCC-----C-CCCCCCCCHHHHHHHHHHcCcChhHCcC
Confidence            8889999999999999999995 2678998887666655554321     1 1123457889999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++++.|+++-
T Consensus       466 ~~el~~~L~~~~  477 (495)
T 1opk_A          466 FAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHH
Confidence            999999998874

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.97  E-value=2.4e-30  Score=206.62  Aligned_cols=157  Identities=31%  Similarity=0.554  Sum_probs=129.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|||+++|+||||||        +||+++.++.+||+|||+++..... .........++..|+|||.+.
T Consensus       367 ~i~~qi~~~L~~LH~~~ivHrDlkp--------~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~  437 (535)
T 2h8h_A          367 DMAAQIASGMAYVERMNYVHRDLRA--------ANILVGENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAAL  437 (535)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCTTSTTTCCCH-HHHTTCSTTSCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCH--------hhEEEcCCCcEEEcccccceecCCC-ceecccCCcCcccccCHHHhc
Confidence            4577899999999999999999999        9999999999999999998776432 222233445678899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|||+| .|..||.+....+....+.....      ......++.++.++|.+||+.||++||+
T Consensus       438 ~~~~~~~sDvwSlGv~l~el~t-~g~~P~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPt  510 (535)
T 2h8h_A          438 YGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNREVLDQVERGYR------MPCPPECPESLHDLMCQCWRKEPEERPT  510 (535)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTT-TTCCSSTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence            8899999999999999999995 26899999887777766653211      1122467889999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +++++..|+++-.
T Consensus       511 ~~~l~~~L~~~~~  523 (535)
T 2h8h_A          511 FEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998854

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=1.9e-30  Score=192.47  Aligned_cols=156  Identities=28%  Similarity=0.532  Sum_probs=125.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       121 ~i~~qi~~~l~~LH~~~i~H~dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  192 (291)
T 1xbb_A          121 ELVHQVSMGMKYLEESNFVHRDLAA--------RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI  192 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeEcCCCCc--------ceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHh
Confidence            4577899999999999999999999        9999999999999999998776443322 122234456789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||
T Consensus       193 ~~~~~~~~~Di~slG~il~~l~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rp  265 (291)
T 1xbb_A          193 NYYKFSSKSDVWSFGVLMWEAFS-YGQKPYRGMKGSEVTAMLEKGER------MGCPAGCPREMYDLMNLCWTYDVENRP  265 (291)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHT-TTCCSSTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             ccCCCChhhhHHHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            88888999999999999999994 27889999887776666543221      112245788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.++.+.|+++
T Consensus       266 s~~~l~~~L~~~  277 (291)
T 1xbb_A          266 GFAAVELRLRNY  277 (291)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998888765

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=6e-31  Score=203.35  Aligned_cols=156  Identities=19%  Similarity=0.294  Sum_probs=116.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.   ++.+||+|||+++......   ......+|+.|+|||
T Consensus       165 ~i~~qi~~aL~~LH~~~ivHrDlkp--------~Nill~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE  233 (400)
T 1nxk_A          165 EIMKSIGEAIQYLHSINIAHRDVKP--------ENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPE  233 (400)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGG
T ss_pred             HHHHHHHHHHHHHHHCCccccCcCc--------ceEEEecCCCCccEEEEecccccccCCCC---ccccCCCCCCccCHh
Confidence            4567889999999999999999999        9999987   7889999999987654322   223556788999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH----HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE----VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      ++.+..++.++||||+|+++|+|+  +|..||.+.....    ....+.....   .........++.++.+++.+||..
T Consensus       234 ~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~  308 (400)
T 1nxk_A          234 VLGPEKYDKSCDMWSLGVIMYILL--CGYPPFYSNHGLAISPGMKTRIRMGQY---EFPNPEWSEVSEEVKMLIRNLLKT  308 (400)
T ss_dssp             GSCCCCSSSHHHHHHHHHHHHHHH--HSSCSCCCCTTCSSCCSHHHHHHHTCC---CCCTTTTTTSCHHHHHHHHTTSCS
T ss_pred             hcCCCCCCCcccHHHHHHHHHHHH--hCCCCCCCCccccccHHHHHHHHcCcc---cCCCcccccCCHHHHHHHHHHCCC
Confidence            998888999999999999999999  5678887653221    2222222111   111122245788999999999999


Q ss_pred             CCCCCCCHHHH--HHHHHhcc
Q psy4332         161 SPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~~~  179 (188)
                      ||++|||+.|+  |+||.+..
T Consensus       309 dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          309 EPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             SGGGSCCHHHHHHSHHHHTTT
T ss_pred             ChhHCcCHHHHhcCccccCCC
Confidence            99999999999  78887643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=5.2e-31  Score=199.84  Aligned_cols=156  Identities=19%  Similarity=0.250  Sum_probs=121.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc----ceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK----FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+|+.|+.|+|++||+||||||        +||++...    +.+||+|||++........  ......+|+.|+||
T Consensus       120 ~~~~qi~~al~~lH~~givHrDlkp--------~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aP  189 (342)
T 2qr7_A          120 AVLFTITKTVEYLHAQGVVHRDLKP--------SNILYVDESGNPESIRICDFGFAKQLRAENG--LLMTPCYTANFVAP  189 (342)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEESSSSCSGGGEEECCCTTCEECBCTTC--CBCCSSCCSSCCCH
T ss_pred             HHHHHHHHHHHHHHHCCcEeccCCH--------HHEEEecCCCCcCeEEEEECCCcccCcCCCC--ceeccCCCccccCH
Confidence            4567889999999999999999999        99998432    4599999999887644321  22345678899999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC---CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL---TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      |.+.+..++.++||||+|+++|++++  |..||.+.   ...+....+......   .........+.++.+++.+||..
T Consensus       190 E~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~  264 (342)
T 2qr7_A          190 EVLERQGYDAACDIWSLGVLLYTMLT--GYTPFANGPDDTPEEILARIGSGKFS---LSGGYWNSVSDTAKDLVSKMLHV  264 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH--SSCSSCSSTTSCHHHHHHHHHHCCCC---CCSTTTTTSCHHHHHHHHHHTCS
T ss_pred             HHhcCCCCCCccCeeeHhHHHHHHhc--CCCCCCCCCcCCHHHHHHHHccCCcc---cCccccccCCHHHHHHHHHHCCC
Confidence            99987778889999999999999994  67888753   445555555443221   11112345788999999999999


Q ss_pred             CCCCCCCHHHH--HHHHHhc
Q psy4332         161 SPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~~  178 (188)
                      ||++||++.++  |+||.+.
T Consensus       265 dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          265 DPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             STTTSCCHHHHTTSHHHHTG
T ss_pred             ChhHCcCHHHHhcCCeecCc
Confidence            99999999999  8999764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=5.5e-31  Score=196.90  Aligned_cols=161  Identities=22%  Similarity=0.279  Sum_probs=118.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........  ......++..|+|||.+.
T Consensus       106 ~i~~~l~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  175 (311)
T 4agu_A          106 SITWQTLQAVNFCHKHNCIHRDVKP--------ENILITKHSVIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLV  175 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCh--------hhEEEcCCCCEEEeeCCCchhccCccc--ccCCCcCCccccChHHHh
Confidence            4567889999999999999999999        999999999999999999876643321  223456788999999997


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC---------------CCccc---------CC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD---------------GEFIY---------LP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~---------------~~~~~---------~~  142 (188)
                      + ..++.++||||+|+++++++|  |..||.+....+....+.......               .....         ..
T Consensus       176 ~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 4agu_A          176 GDTQYGPPVDVWAIGCVFAELLS--GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELK  253 (311)
T ss_dssp             TCSCCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHH
T ss_pred             cCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhh
Confidence            6 567999999999999999994  678998887665544432211100               00000         01


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      .+..+.++.+++.+||..||++|||++|+  |+||+++..
T Consensus       254 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          254 FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             cccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence            13567889999999999999999999999  889987754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=1.6e-30  Score=191.88  Aligned_cols=156  Identities=29%  Similarity=0.488  Sum_probs=122.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......+++.|+|||.+.
T Consensus       117 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  187 (281)
T 3cc6_A          117 LYSLQICKAMAYLESINCVHRDIAV--------RNILVASPECVKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESIN  187 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSG--------GGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCcc--------ceEEECCCCcEEeCccCCCcccccccc-cccccCCCCcceeCchhhc
Confidence            3467889999999999999999999        999999999999999999876644321 1223445677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||......+....+.....      .......++.+.+++.+||..||++||+
T Consensus       188 ~~~~~~~~Di~slG~il~~llt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps  260 (281)
T 3cc6_A          188 FRRFTTASDVWMFAVCMWEILS-FGKQPFFWLENKDVIGVLEKGDR------LPKPDLCPPVLYTLMTRCWDYDPSDRPR  260 (281)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TTCCTTTTSCGGGHHHHHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhccHHHHHHHHHHHh-CCCCCcccCChHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHccCCchhCcC
Confidence            8889999999999999999994 26789987665555554433211      1122456789999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      +.++...|+++.
T Consensus       261 ~~ell~~L~~~~  272 (281)
T 3cc6_A          261 FTELVCSLSDVY  272 (281)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999988888763

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=4.3e-31  Score=203.26  Aligned_cols=156  Identities=18%  Similarity=0.262  Sum_probs=125.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC--cceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK--KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.  .+.+||+|||++........   .....+|+.|+|||+
T Consensus       153 ~i~~qi~~aL~~LH~~givHrDlkp--------~NIll~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~  221 (387)
T 1kob_A          153 NYMRQACEGLKHMHEHSIVHLDIKP--------ENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEI  221 (387)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSTTCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeecccch--------HHeEEecCCCCceEEEecccceecCCCcc---eeeeccCCCccCchh
Confidence            3567889999999999999999999        9999974  46799999999887644321   123457889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+|+++|+|+  +|..||.+....+....+.......   ........+.++.+++.+||..||++|
T Consensus       222 ~~~~~~~~~~DiwSlG~il~ell--tg~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dP~~R  296 (387)
T 1kob_A          222 VDREPVGFYTDMWAIGVLGYVLL--SGLSPFAGEDDLETLQNVKRCDWEF---DEDAFSSVSPEAKDFIKNLLQKEPRKR  296 (387)
T ss_dssp             HTTCCBCHHHHHHHHHHHHHHHH--HSCCSSCCSSHHHHHHHHHHCCCCC---CSSTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             ccCCCCCCcccEeeHhHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCCC---CccccccCCHHHHHHHHHHcCCChhHC
Confidence            99888999999999999999999  5678999888777766665432211   112224568899999999999999999


Q ss_pred             CCHHHH--HHHHHhcc
Q psy4332         166 PSFTEI--HLFLQRKN  179 (188)
Q Consensus       166 ps~~el--~~~l~~~~  179 (188)
                      ||+.|+  |+||+...
T Consensus       297 pt~~ell~hp~~~~~~  312 (387)
T 1kob_A          297 LTVHDALEHPWLKGDH  312 (387)
T ss_dssp             CCHHHHHTSTTTSSCC
T ss_pred             cCHHHHhhCccccCCc
Confidence            999999  77887543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.97  E-value=1.3e-31  Score=198.82  Aligned_cols=159  Identities=16%  Similarity=0.177  Sum_probs=120.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE---cCcceEEEccCCCCccCCCCccc-----cccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDFATDSDMFSSDYY-----RVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~   79 (188)
                      .++.+++.|+.|+|++||+|+||||        +||++   +.++.+||+|||++.........     .......+++.
T Consensus       109 ~i~~qi~~~l~~LH~~~ivH~Dlkp--------~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~  180 (296)
T 4hgt_A          109 LLADQMISRIEYIHSKNFIHRDVKP--------DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  180 (296)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGG
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCcc
Confidence            4567899999999999999999999        99999   78889999999998776543221     12235568899


Q ss_pred             ccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH---HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL---EVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      |+|||.+.+..++.++||||+|+++|+++  +|..||.+....   .....+........  ........++++.+++.+
T Consensus       181 y~aPE~~~~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~  256 (296)
T 4hgt_A          181 YASINTHLGIEQSRRDDLESLGYVLMYFN--LGSLPWQGLKAATKRQKYERISEKKMSTP--IEVLCKGYPSEFATYLNF  256 (296)
T ss_dssp             GCCHHHHTTCCCCHHHHHHHHHHHHHHHH--HSSCTTSSCCCSSSSSHHHHHHHHHHHSC--HHHHTTTSCHHHHHHHHH
T ss_pred             ccchHHhcCCCCCchhHHHHHHHHHHHHh--cCCCCCcccchhhhhhhhhhhhcccccch--hhhhhccCCHHHHHHHHH
Confidence            99999999888999999999999999999  567888764321   12222211110000  011113457899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhc
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ||+.||++||+++++.+.|+++
T Consensus       257 ~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          257 CRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCHHHHHHHHHHH
Confidence            9999999999999998888765

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=3.1e-30  Score=188.82  Aligned_cols=157  Identities=29%  Similarity=0.591  Sum_probs=128.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++....... ........++..|+|||.+.
T Consensus       108 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  178 (267)
T 3t9t_A          108 GMCLDVCEGMAYLEEACVIHRDLAA--------RNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFS  178 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCCG--------GGEEECGGGCEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCch--------heEEECCCCCEEEccccccccccccc-ccccccccccccccChhhhc
Confidence            3567889999999999999999999        99999999999999999987654322 12233455677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||+
T Consensus       179 ~~~~~~~~Di~slG~il~~l~~-~g~~p~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps  251 (267)
T 3t9t_A          179 FSRYSSKSDVWSFGVLMWEVFS-EGKIPYENRSNSEVVEDISTGFR------LYKPRLASTHVYQIMNHCWRERPEDRPA  251 (267)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCccchhchhhhHHHHHHHhc-cCCCCCCCCCHHHHHHHHhcCCc------CCCCccCcHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999995 26889998887777666653211      1122446789999999999999999999


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +.++.+.|+++.+
T Consensus       252 ~~~ll~~L~~l~~  264 (267)
T 3t9t_A          252 FSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=1.5e-30  Score=192.65  Aligned_cols=161  Identities=27%  Similarity=0.487  Sum_probs=126.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       125 ~~~~~i~~~l~~lH~~~i~H~dikp--------~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  196 (291)
T 1u46_A          125 RYAVQVAEGMGYLESKRFIHRDLAA--------RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL  196 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCch--------heEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhh
Confidence            3567889999999999999999999        9999999999999999998776543321 122344567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|++++++++ .|..||.+....+....+.....     ........+.++.+++.+||..||++||
T Consensus       197 ~~~~~~~~~Di~slG~il~~l~~-~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rp  270 (291)
T 1u46_A          197 KTRTFSHASDTWMFGVTLWEMFT-YGQEPWIGLNGSQILHKIDKEGE-----RLPRPEDCPQDIYNVMVQCWAHKPEDRP  270 (291)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHTSCC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCCCcccCCHHHHHHHHHccCC-----CCCCCcCcCHHHHHHHHHHccCCcccCc
Confidence            88888999999999999999994 27899999887777766653221     1122345788999999999999999999


Q ss_pred             CHHHHHHHHHhccCCC
Q psy4332         167 SFTEIHLFLQRKNLGY  182 (188)
Q Consensus       167 s~~el~~~l~~~~~~~  182 (188)
                      ++.++.++|+++....
T Consensus       271 s~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          271 TFVALRDFLLEAQPTD  286 (291)
T ss_dssp             CHHHHHHHHHHHC---
T ss_pred             CHHHHHHHHHHhCccc
Confidence            9999999999886543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=1.5e-30  Score=197.48  Aligned_cols=158  Identities=20%  Similarity=0.267  Sum_probs=121.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE-------------------cCcceEEEccCCCCccCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV-------------------GKKFEIKISDFATDSDMFSSDYY   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill-------------------~~~~~~kl~dfg~~~~~~~~~~~   68 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||++                   +.++.+||+|||++......   
T Consensus       127 ~i~~qi~~~L~~lH~~~ivH~Dlkp--------~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  195 (355)
T 2eu9_A          127 HMAYQLCHALRFLHENQLTHTDLKP--------ENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---  195 (355)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCG--------GGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC---
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEEecccccccccccccccccccCCCcEEEeecCcccccccc---
Confidence            4677899999999999999999999        88888                   56788999999998764332   


Q ss_pred             cccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-----------
Q psy4332          69 RVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-----------  137 (188)
Q Consensus        69 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  137 (188)
                        .....+|+.|+|||.+.+..++.++||||+|+++|+++  +|..||.+....+....+.........           
T Consensus       196 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  271 (355)
T 2eu9_A          196 --HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY--RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKY  271 (355)
T ss_dssp             --CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGG
T ss_pred             --ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhh
Confidence              23456889999999999888999999999999999999  567899887765544433322111000           


Q ss_pred             --------------------------cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         138 --------------------------FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       138 --------------------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                                                .........+.++.+++.+||+.||++|||+.|+  |+||+++..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          272 FYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             hcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence                                      0001112225678999999999999999999999  899997643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=2.1e-31  Score=200.91  Aligned_cols=158  Identities=16%  Similarity=0.194  Sum_probs=121.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce-----EEEccCCCCccCCCCccc-----cccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE-----IKISDFATDSDMFSSDYY-----RVHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~-----~kl~dfg~~~~~~~~~~~-----~~~~~~~~~   77 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.     +||+|||+++........     .......||
T Consensus       109 ~i~~qi~~~l~~LH~~~iiHrDlkp--------~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt  180 (330)
T 2izr_A          109 MIAIQLISRMEYVHSKNLIYRDVKP--------ENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT  180 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCH--------HHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCC
Confidence            4677899999999999999999999        9999999887     999999998876443221     122456689


Q ss_pred             ccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHH
Q psy4332          78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---DLEVLENISHLHADDGEFIYLPTPQTTKDILDLM  154 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  154 (188)
                      +.|+|||.+.+..++.++||||||+++|+++  +|..||.+..   ..+....+.........  .......+ ++.+++
T Consensus       181 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell--~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~p-~~~~li  255 (330)
T 2izr_A          181 ARYMSINTHLGKEQSRRDDLEALGHMFMYFL--RGSLPWQGLKADTLKERYQKIGDTKRATPI--EVLCENFP-EMATYL  255 (330)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH--HSSCTTTTCCCSSHHHHHHHHHHHHHHSCH--HHHTTTCH-HHHHHH
T ss_pred             ccccChHHHcCCCCCchhHHHHHHHHHHHHh--cCCCCccccccccHHHHHHHHHhhhccCCH--HHHhccCh-HHHHHH
Confidence            9999999999888999999999999999999  5678998743   22333333221110110  00112345 999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         155 NECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       155 ~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      .+||..||.+||+++++.+.|+++
T Consensus       256 ~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          256 RYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             HHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999998888765

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=3.1e-31  Score=198.61  Aligned_cols=148  Identities=17%  Similarity=0.172  Sum_probs=112.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......||+.|+|||++.
T Consensus       161 ~i~~qi~~aL~~LH~~~ivH~Dikp--------~NIll~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~  229 (311)
T 3p1a_A          161 GYLRDTLLALAHLHSQGLVHLDVKP--------ANIFLGPRGRCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQ  229 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGG
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCH--------HHEEECCCCCEEEccceeeeecccCC---CCcccCCCccccCHhHhc
Confidence            4567899999999999999999999        99999999999999999987664332   233456889999999987


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      + .++.++||||+|+++++++++  ..++.+.   .....+....     .........+.++.+++.+||+.||++|||
T Consensus       230 ~-~~~~~~DiwslG~il~el~~g--~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  298 (311)
T 3p1a_A          230 G-SYGTAADVFSLGLTILEVACN--MELPHGG---EGWQQLRQGY-----LPPEFTAGLSSELRSVLVMMLEPDPKLRAT  298 (311)
T ss_dssp             T-CCSTHHHHHHHHHHHHHHHHT--CCCCSSH---HHHHHHTTTC-----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             C-CCCchhhHHHHHHHHHHHHhC--CCCCCCc---cHHHHHhccC-----CCcccccCCCHHHHHHHHHHcCCChhhCcC
Confidence            5 789999999999999999964  3343332   2222222211     111112456789999999999999999999


Q ss_pred             HHHH--HHHHHh
Q psy4332         168 FTEI--HLFLQR  177 (188)
Q Consensus       168 ~~el--~~~l~~  177 (188)
                      ++|+  |+||++
T Consensus       299 ~~ell~hp~~~~  310 (311)
T 3p1a_A          299 AEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHTSGGGSC
T ss_pred             HHHHHhCccccC
Confidence            9999  778764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=2.4e-30  Score=190.53  Aligned_cols=156  Identities=18%  Similarity=0.218  Sum_probs=125.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE---cCcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||++   +.++.++|+|||++.......   ......+++.|+|||
T Consensus       110 ~i~~~i~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE  178 (277)
T 3f3z_A          110 RIMKDVLSAVAYCHKLNVAHRDLKP--------ENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQ  178 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEESSSSTTCCEEECCCTTCEECCTTS---CBCCCCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCCCCH--------HHEEEecCCCCCcEEEEecccceeccCcc---chhccCCCCCccChH
Confidence            4677899999999999999999999        99999   778899999999987664332   223456888999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+ .++.++||||+|+++++++  +|..||.+....+....+..........   .....+.++.+++.+||+.||++
T Consensus       179 ~~~~-~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~  252 (277)
T 3f3z_A          179 VLEG-LYGPECDEWSAGVMMYVLL--CGYPPFSAPTDSEVMLKIREGTFTFPEK---DWLNVSPQAESLIRRLLTKSPKQ  252 (277)
T ss_dssp             HHTT-CBCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCCCCHH---HHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             Hhcc-cCCchhhehhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhCCCCCCch---hhhcCCHHHHHHHHHHccCChhh
Confidence            9874 4899999999999999999  5678999888777776665432211111   11246789999999999999999


Q ss_pred             CCCHHHH--HHHHHhccC
Q psy4332         165 RPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~  180 (188)
                      ||++.++  |+||++..+
T Consensus       253 R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          253 RITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             SCCHHHHTTSHHHHHHHC
T ss_pred             CcCHHHHhcCHHHhcccc
Confidence            9999999  899987643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.97  E-value=2.9e-30  Score=191.87  Aligned_cols=160  Identities=13%  Similarity=0.175  Sum_probs=121.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......+|+.|+|||.+.
T Consensus       115 ~~~~qi~~~l~~lH~~~i~H~Dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~  185 (294)
T 4eqm_A          115 NFTNQILDGIKHAHDMRIVHRDIKP--------QNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAK  185 (294)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCCEEEEeCCCccccccccc-cccCccccCccccCHhHhc
Confidence            4567889999999999999999999        999999999999999999877643321 1223455888999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++||||+|+++|+++  +|..||.+...............  ...........+..+.+++.+||+.||++|| 
T Consensus       186 ~~~~~~~~Di~slG~~l~~ll--~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          186 GEATDECTDIYSIGIVLYEML--VGEPPFNGETAVSIAIKHIQDSV--PNVTTDVRKDIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHH--HSSCSSCSSCHHHHHHHHHSSCC--CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             CCCCCchHhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHhhccC--CCcchhcccCCCHHHHHHHHHHhcCCHhHccc
Confidence            888999999999999999999  46789998876655444432211  1111222355788999999999999999999 


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      +++++...|+++-.
T Consensus       262 ~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          262 TIQEMKDDLSSVLH  275 (294)
T ss_dssp             SHHHHHHHHHTSSS
T ss_pred             cHHHHHHHHHHHHh
Confidence            89999888887643

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=9.2e-31  Score=193.22  Aligned_cols=162  Identities=21%  Similarity=0.246  Sum_probs=125.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc----eEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++    .+||+|||++.......   ......+++.|+||
T Consensus       112 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aP  180 (283)
T 3bhy_A          112 QFLKQILDGVHYLHSKRIAHFDLKP--------ENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAP  180 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCh--------HHEEEecCCCCCCceEEEecccceeccCCC---cccccCCCcCccCc
Confidence            4567899999999999999999999        999998876    79999999987664432   22344578899999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++||||+|++++++++  |..||.+....+....+........   .......+..+.+++.+||..||+
T Consensus       181 E~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~  255 (283)
T 3bhy_A          181 EIVNYEPLGLEADMWSIGVITYILLS--GASPFLGETKQETLTNISAVNYDFD---EEYFSNTSELAKDFIRRLLVKDPK  255 (283)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHHH--SSCTTCCSSHHHHHHHHHTTCCCCC---HHHHTTCCHHHHHHHHTTSCSSGG
T ss_pred             ceecCCCCCcchhhhhHHHHHHHHHH--CCCCCCCcchHHHHHHhHhcccCCc---chhcccCCHHHHHHHHHHccCCHh
Confidence            99998889999999999999999994  6789998887776666543322111   111135678899999999999999


Q ss_pred             CCCCHHHH--HHHHHhccCCCCCC
Q psy4332         164 ERPSFTEI--HLFLQRKNLGYVPP  185 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~~~~~~~  185 (188)
                      +||++.++  |+||++++......
T Consensus       256 ~Rps~~~~l~h~~~~~~~~~~~~~  279 (283)
T 3bhy_A          256 RRMTIAQSLEHSWIKAIRRRNVRG  279 (283)
T ss_dssp             GSCCHHHHHHCHHHHHHHHCCC--
T ss_pred             HCcCHHHHHhCHHHHHHHHHhhhc
Confidence            99999999  78999886654433

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=1.4e-30  Score=199.42  Aligned_cols=158  Identities=20%  Similarity=0.233  Sum_probs=121.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++......     .....+|+.|+|||.+.
T Consensus       148 ~i~~qi~~aL~~LH~~~ivH~Dikp--------~NIll~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~  214 (371)
T 4exu_A          148 YLVYQMLKGLKYIHSAGVVHRDLKP--------GNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVIL  214 (371)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHS
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCcCH--------HHeEECCCCCEEEEecCcccccccC-----cCCcccCccccCHHHhc
Confidence            3567899999999999999999999        9999999999999999998765332     23455788899999998


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc------------------------ccCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF------------------------IYLP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~  142 (188)
                      + ..++.++||||+|+++++++  +|..||.+....+....+..........                        ....
T Consensus       215 ~~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (371)
T 4exu_A          215 SWMHYNQTVDIWSVGCIMAEML--TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQL  292 (371)
T ss_dssp             CCSCCCTTHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHH
T ss_pred             CCCCCCcHHhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHh
Confidence            6 57899999999999999999  5678999887666555543321111100                        0001


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      .+..+.++.+++.+||+.||++|||+.|+  |+||+....
T Consensus       293 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  332 (371)
T 4exu_A          293 FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD  332 (371)
T ss_dssp             STTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred             ccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCC
Confidence            13457899999999999999999999999  889987643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.6e-30  Score=209.20  Aligned_cols=156  Identities=27%  Similarity=0.521  Sum_probs=123.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.|+.|||++||+||||||        +||+++.++.+||+|||+++........ .......+++.|+|||++
T Consensus       440 ~i~~qi~~~L~~LH~~~iiHrDlkp--------~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~  511 (613)
T 2ozo_A          440 ELLHQVSMGMKYLEEKNFVHRNLAA--------RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI  511 (613)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCEEcCcCCH--------HHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhh
Confidence            4567899999999999999999999        9999999999999999999876433211 122233456789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++||++| .|..||.+....+....+....     . ......++.++.+++.+||..||++||
T Consensus       512 ~~~~~~~~sDvwSlGv~l~ellt-~G~~Pf~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~l~~li~~cl~~dP~~RP  584 (613)
T 2ozo_A          512 NFRKFSSRSDVWSYGVTMWEALS-YGQKPYKKMKGPEVMAFIEQGK-----R-MECPPECPPELYALMSDCWIYKWEDRP  584 (613)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCSHHHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHTTCSSTTTSC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHcCC-----C-CCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence            98899999999999999999995 2789999988777776665432     1 112245788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.++.+.|+++
T Consensus       585 s~~~l~~~L~~~  596 (613)
T 2ozo_A          585 DFLTVEQRMRAC  596 (613)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998887765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=1.4e-30  Score=193.49  Aligned_cols=158  Identities=25%  Similarity=0.402  Sum_probs=116.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       118 ~~~~qi~~~l~~lH~~~ivH~Dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  189 (295)
T 3ugc_A          118 QYTSQICKGMEYLGTKRYIHRDLAT--------RNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL  189 (295)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcccCCCCH--------hhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh
Confidence            3567899999999999999999999        9999999999999999998876443221 122344466779999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH----------------HHHHHhhcccCCCCCcccCCCCCChHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL----------------EVLENISHLHADDGEFIYLPTPQTTKDI  150 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (188)
                      .+..++.++||||+|+++++++|  +..||......                .....+..     . ........++.++
T Consensus       190 ~~~~~~~~~Di~slG~~l~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~l  261 (295)
T 3ugc_A          190 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN-----N-GRLPRPDGCPDEI  261 (295)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHH--TTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT-----T-CCCCCCTTCCHHH
T ss_pred             cCCCCChHHHHHHHHHHHHHHHh--cccccCCChHHHHhhhcCccccchhHHHHHHHHhc-----c-CcCCCCcCcCHHH
Confidence            98899999999999999999995  45565543211                11111111     1 1112234678899


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         151 LDLMNECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       151 ~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      .+++.+||..||++|||++|+.+.|+++.+.
T Consensus       262 ~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          262 YMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999988654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.3e-30  Score=193.62  Aligned_cols=156  Identities=29%  Similarity=0.519  Sum_probs=119.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......... ......++..|+|||.+
T Consensus       151 ~i~~qi~~aL~~LH~~~ivH~Dikp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  222 (333)
T 1mqb_A          151 GMLRGIAAGMKYLANMNYVHRDLAA--------RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI  222 (333)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCh--------heEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhc
Confidence            4567889999999999999999999        99999999999999999987764332111 12233456789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++++++| .|..||.+....+....+.....      .......+.++.+++.+||+.||++||
T Consensus       223 ~~~~~~~~~Di~slG~il~ellt-~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rp  295 (333)
T 1mqb_A          223 SYRKFTSASDVWSFGIVMWEVMT-YGERPYWELSNHEVMKAINDGFR------LPTPMDCPSAIYQLMMQCWQQERARRP  295 (333)
T ss_dssp             HSCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHTTCC------CCCCTTCBHHHHHHHHHHTCSSTTTSC
T ss_pred             ccCCCCchhhhHHHHHHHHHHHc-CCCCCcccCCHHHHHHHHHCCCc------CCCcccCCHHHHHHHHHHcCCChhhCc
Confidence            98889999999999999999995 27889998887776666543211      112345788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.++...|+++
T Consensus       296 s~~~l~~~L~~~  307 (333)
T 1mqb_A          296 KFADIVSILDKL  307 (333)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998888765

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=4.3e-31  Score=199.25  Aligned_cols=160  Identities=18%  Similarity=0.247  Sum_probs=116.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-----CcceEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-----KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      .++.+|+.++.|+|++||+|+||||        +||+++     ..+.+||+|||++.......  .......+|+.|+|
T Consensus       136 ~i~~ql~~~l~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~a  205 (329)
T 3gbz_A          136 SFLYQLINGVNFCHSRRCLHRDLKP--------QNLLLSVSDASETPVLKIGDFGLARAFGIPI--RQFTHEIITLWYRP  205 (329)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCC
T ss_pred             HHHHHHHHHHHHHHhCCEECCCCCH--------HHEEEecCCCCccceEEECcCCCccccCCcc--cccCCCcCCccccC
Confidence            4577899999999999999999999        999994     45569999999987654322  12234456888999


Q ss_pred             hhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc------------CC-------
Q psy4332          83 WESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY------------LP-------  142 (188)
Q Consensus        83 Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-------  142 (188)
                      ||.+.+. .++.++||||+|+++|+++  +|..||.+....+....+............            .+       
T Consensus       206 PE~~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (329)
T 3gbz_A          206 PEILLGSRHYSTSVDIWSIACIWAEML--MKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTL  283 (329)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCH
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHHHHHH--HCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccH
Confidence            9999864 4799999999999999999  467899888776665555432111111000            00       


Q ss_pred             ----CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         143 ----TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       143 ----~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                          ....+.++.+++.+||+.||++|||++|+  |+||++.+
T Consensus       284 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          284 KRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             HHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                01156789999999999999999999999  78998764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=2e-30  Score=197.05  Aligned_cols=165  Identities=20%  Similarity=0.163  Sum_probs=123.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--------ccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--------VHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~~~   79 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++..........        ......+|+.
T Consensus       116 ~~~~qi~~~L~~LH~~~ivH~Dlkp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~  187 (353)
T 2b9h_A          116 YFIYQTLRAVKVLHGSNVIHRDLKP--------SNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW  187 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCCTTCEECC----------------CCCCCCGG
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHeEEcCCCcEEEEecccccccccccccccCccccccchhhcccccc
Confidence            4567899999999999999999999        99999999999999999987664322111        1123467899


Q ss_pred             ccchhhhhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC---------------------
Q psy4332          80 WMAWESVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE---------------------  137 (188)
Q Consensus        80 ~~~Pe~~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------  137 (188)
                      |+|||.+.+ ..++.++||||+|+++++++  +|..||.+.........+.........                     
T Consensus       188 y~aPE~~~~~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (353)
T 2b9h_A          188 YRAPEVMLTSAKYSRAMDVWSCGCILAELF--LRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPM  265 (353)
T ss_dssp             GCCHHHHHSCCCCCHHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCC
T ss_pred             ccCCeeeccCCCccchhhHHHHHHHHHHHH--hCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccC
Confidence            999998764 56889999999999999999  567899888765544433221111100                     


Q ss_pred             ----cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCC
Q psy4332         138 ----FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       138 ----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~  182 (188)
                          ......+..+.++.+++.+||..||++|||+.|+  |+||+......
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN  316 (353)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred             CCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcc
Confidence                0000013567899999999999999999999999  78998875543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.8e-30  Score=191.16  Aligned_cols=156  Identities=27%  Similarity=0.526  Sum_probs=126.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......+++.|+|||.+
T Consensus       114 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (287)
T 1u59_A          114 ELLHQVSMGMKYLEEKNFVHRDLAA--------RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI  185 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCEeeCCCch--------heEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHh
Confidence            4567889999999999999999999        9999999999999999998776433221 122334467889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++++++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||
T Consensus       186 ~~~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rp  258 (287)
T 1u59_A          186 NFRKFSSRSDVWSYGVTMWEALS-YGQKPYKKMKGPEVMAFIEQGKR------MECPPECPPELYALMSDCWIYKWEDRP  258 (287)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHT-TSCCTTTTCCTHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             ccCCCCchhhHHHHHHHHHHHHc-CCCCCcccCCHHHHHHHHhcCCc------CCCCCCcCHHHHHHHHHHcCCChhhCc
Confidence            88888999999999999999994 27889988877666665543211      112246788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      ++.++.+.|+++
T Consensus       259 s~~~l~~~l~~~  270 (287)
T 1u59_A          259 DFLTVEQRMRAC  270 (287)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998877765

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=4.5e-31  Score=198.88  Aligned_cols=162  Identities=20%  Similarity=0.258  Sum_probs=105.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc---eEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF---EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++   .+||+|||++........  ......+|+.|+|||
T Consensus       110 ~i~~qi~~~l~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE  179 (325)
T 3kn6_A          110 YIMRKLVSAVSHMHDVGVVHRDLKP--------ENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAPE  179 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEEEC----CEEEECCCTTCEECCC--------------------
T ss_pred             HHHHHHHHHHHHHHHCCCeecCCCH--------HHEEEecCCCcccEEEeccccceecCCCCC--cccccCCCcCccCHH
Confidence            4577899999999999999999999        999997765   799999999876543321  223445788999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-------HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHH
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-------LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  157 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+...       .+....+........   .......++++.+++.+|
T Consensus       180 ~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~  254 (325)
T 3kn6_A          180 LLNQNGYDESCDLWSLGVILYTML--SGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE---GEAWKNVSQEAKDLIQGL  254 (325)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHH--HSSCTTC-------CCCHHHHHHHHTTTCCCCC---SHHHHTSCHHHHHHHHHH
T ss_pred             HhcCCCCCCccchHHHHHHHHHHH--hCCCCCCCCccccccccHHHHHHHHHcCCCCCC---cccccCCCHHHHHHHHHH
Confidence            999888999999999999999999  46789876432       334444432211110   001134678999999999


Q ss_pred             hccCCCCCCCHHHH--HHHHHhccCCCCC
Q psy4332         158 WKRSPTERPSFTEI--HLFLQRKNLGYVP  184 (188)
Q Consensus       158 l~~dp~~Rps~~el--~~~l~~~~~~~~~  184 (188)
                      |..||++||+++++  |+||++.......
T Consensus       255 L~~dP~~Rpt~~ell~h~w~~~~~~~~~~  283 (325)
T 3kn6_A          255 LTVDPNKRLKMSGLRYNEWLQDGSQLSSN  283 (325)
T ss_dssp             HCCCTTTCCCTTTSTTCGGGCTTCCCCCS
T ss_pred             CCCChhHCCCHHHHhcChhhccCccCCCC
Confidence            99999999999999  8999876554433

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=3.5e-30  Score=203.58  Aligned_cols=157  Identities=22%  Similarity=0.296  Sum_probs=125.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc---CcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG---KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++   .++.+||+|||++.......   ......+|+.|+|||
T Consensus       125 ~i~~qi~~al~~lH~~~ivH~Dlkp--------~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE  193 (486)
T 3mwu_A          125 RIIKQVFSGITYMHKHNIVHRDLKP--------ENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPE  193 (486)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGG
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCch--------HHEEEecCCCCCCEEEEECCcCeECCCCC---ccCCCcCCCCCCCHH
Confidence            4567889999999999999999999        999995   45679999999987664432   223456899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      ++.+ .++.++||||+|+++|+++  +|..||.+....+....+........   .......++++.+++.+||..||++
T Consensus       194 ~~~~-~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~  267 (486)
T 3mwu_A          194 VLRG-TYDEKCDVWSAGVILYILL--SGTPPFYGKNEYDILKRVETGKYAFD---LPQWRTISDDAKDLIRKMLTFHPSL  267 (486)
T ss_dssp             GGGS-CCCHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCCSC---SGGGGGSCHHHHHHHHHHTCSSTTT
T ss_pred             HhCC-CCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCCCC---CcccCCCCHHHHHHHHHHcCCChhh
Confidence            9874 5899999999999999999  56799999888777777665432211   1112456789999999999999999


Q ss_pred             CCCHHHH--HHHHHhccCC
Q psy4332         165 RPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~~  181 (188)
                      |||+.++  |+||++....
T Consensus       268 R~t~~~~l~hp~~~~~~~~  286 (486)
T 3mwu_A          268 RITATQCLEHPWIQKYSSE  286 (486)
T ss_dssp             SCCHHHHHHCHHHHHTCCC
T ss_pred             CcCHHHHhcCHhhccCccc
Confidence            9999999  8899987543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=1.3e-31  Score=207.77  Aligned_cols=144  Identities=12%  Similarity=0.070  Sum_probs=114.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh-
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV-   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~-   86 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++.....     .....| +.|+|||.+ 
T Consensus       215 ~i~~qi~~aL~~LH~~~iiHrDiKp--------~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~  280 (413)
T 3dzo_A          215 QLTLQVIRLLASLHHYGLVHTYLRP--------VDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTA  280 (413)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCcccCCccc--------ceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhh
Confidence            3457899999999999999999999        9999999999999999998765432     233445 789999999 


Q ss_pred             ---------hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHH
Q psy4332          87 ---------RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        87 ---------~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  157 (188)
                               .+..++.++||||||+++|+++|  |..||.+....+....+.           .....+++++.+++.+|
T Consensus       281 ~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt--g~~Pf~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~  347 (413)
T 3dzo_A          281 ERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC--ADLPNTDDAALGGSEWIF-----------RSCKNIPQPVRALLEGF  347 (413)
T ss_dssp             HHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH--SSCCCCTTGGGSCSGGGG-----------SSCCCCCHHHHHHHHHH
T ss_pred             ccccccccccCcCCCchhhHHHHHHHHHHHHH--CCCCCCCcchhhhHHHHH-----------hhcccCCHHHHHHHHHH
Confidence                     44457789999999999999994  678998765433222111           11235678999999999


Q ss_pred             hccCCCCCCCHHHH--HHHHHhc
Q psy4332         158 WKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       158 l~~dp~~Rps~~el--~~~l~~~  178 (188)
                      |+.||++||++.++  ++||+++
T Consensus       348 l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          348 LRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             TCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ccCChhhCcCHHHHHhCHHHHHH
Confidence            99999999999998  6777655

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.97  E-value=8.4e-31  Score=194.50  Aligned_cols=160  Identities=16%  Similarity=0.166  Sum_probs=120.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc---CcceEEEccCCCCccCCCCccc-----cccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG---KKFEIKISDFATDSDMFSSDYY-----RVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~---~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~   79 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++   .++.+||+|||++.........     .......+++.
T Consensus       109 ~i~~qi~~~l~~lH~~~ivH~dlkp--------~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (296)
T 3uzp_A          109 LLADQMISRIEYIHSKNFIHRDVKP--------DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  180 (296)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTT
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCH--------HHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccc
Confidence            4577899999999999999999999        999994   7788999999998766543221     12245568899


Q ss_pred             ccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH---HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      |+|||.+.+..++.++||||+|+++|+++|  |..||.+...   .+....+.........  .......+.++.+++.+
T Consensus       181 y~aPE~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~  256 (296)
T 3uzp_A          181 YASINTHLGIEQSRRDDLESLGYVLMYFNL--GSLPWQGLKAATKRQKYERISEKKMSTPI--EVLCKGYPSEFATYLNF  256 (296)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCTTSSCCCSSSSSHHHHHHHHHHHSCH--HHHTTTSCHHHHHHHHH
T ss_pred             cCChhhhcCCCCCcchhhHHHHHHHHHHHh--CCCCCCCcCchhhhhhhhhhcccccCCch--HHHHhhCCHHHHHHHHH
Confidence            999999998889999999999999999994  6788876421   1122222111100000  01114567899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhcc
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                      ||+.||++||+++++.+.|+++.
T Consensus       257 ~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          257 CRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHhcCcCcCCCHHHHHHHHHHHH
Confidence            99999999999999998888763

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=6.9e-31  Score=201.78  Aligned_cols=151  Identities=18%  Similarity=0.282  Sum_probs=119.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||++.......   ......||+.|+|||++.
T Consensus       119 ~~~~qi~~aL~~LH~~givHrDlkp--------~NIll~~~g~vkL~DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~  187 (384)
T 4fr4_A          119 LFICELVMALDYLQNQRIIHRDMKP--------DNILLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFS  187 (384)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECCTTC---CBCCCCSCGGGCCGGGTC
T ss_pred             HHHHHHHHHHHHHHHCCceeccCcH--------HHeEECCCCCEEEeccceeeeccCCC---ceeccCCCccccCCeeec
Confidence            3567899999999999999999999        99999999999999999987664332   234567899999999996


Q ss_pred             c---CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          88 L---RKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        88 ~---~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +   ..++.++||||+|+++|+|+  +|..||....   ..+....+....       ......++.++.+++.+||..|
T Consensus       188 ~~~~~~~~~~~DiwSlG~il~ell--tG~~Pf~~~~~~~~~~~~~~~~~~~-------~~~p~~~s~~~~~li~~lL~~d  258 (384)
T 4fr4_A          188 SRKGAGYSFAVDWWSLGVTAYELL--RGRRPYHIRSSTSSKEIVHTFETTV-------VTYPSAWSQEMVSLLKKLLEPN  258 (384)
T ss_dssp             CCSSCCBCTTHHHHHHHHHHHHHH--HSSCSSCCCTTSCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHSCSS
T ss_pred             cCCCCCCCccceeechHHHHHHHH--hCCCCCCCCCCccHHHHHHHHhhcc-------cCCCCcCCHHHHHHHHHHhcCC
Confidence            4   34788999999999999999  4678887542   233333332211       1122456889999999999999


Q ss_pred             CCCCCC-HHHH--HHHHHhc
Q psy4332         162 PTERPS-FTEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rps-~~el--~~~l~~~  178 (188)
                      |++||+ ++++  |+||+.+
T Consensus       259 P~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          259 PDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             GGGSCCSHHHHHTSGGGTTC
T ss_pred             HhHhcccHHHHHcChhhhcC
Confidence            999998 8888  7788765

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=2.4e-30  Score=210.11  Aligned_cols=157  Identities=27%  Similarity=0.526  Sum_probs=125.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc-ccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.|+.|||++||+||||||        +||+++.++.+||+|||+++....... ........++..|+|||++
T Consensus       473 ~i~~qi~~~L~yLH~~~iiHrDLkp--------~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~  544 (635)
T 4fl3_A          473 ELVHQVSMGMKYLEESNFVHRDLAA--------RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI  544 (635)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCEeCCCCCh--------HhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhh
Confidence            4677899999999999999999999        999999999999999999877654322 1222334467789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++||++| .|..||.+....+....+.....      ......++.++.+++.+||..||++||
T Consensus       545 ~~~~~~~~sDvwSlGv~l~ellt-~G~~Pf~~~~~~~~~~~i~~~~~------~~~p~~~~~~l~~li~~cl~~dP~~RP  617 (635)
T 4fl3_A          545 NYYKFSSKSDVWSFGVLMWEAFS-YGQKPYRGMKGSEVTAMLEKGER------MGCPAGCPREMYDLMNLCWTYDVENRP  617 (635)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TTCCSSTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCHhHCc
Confidence            98899999999999999999995 27899999988777776654321      112245788999999999999999999


Q ss_pred             CHHHHHHHHHhcc
Q psy4332         167 SFTEIHLFLQRKN  179 (188)
Q Consensus       167 s~~el~~~l~~~~  179 (188)
                      ++.++...|+++-
T Consensus       618 s~~~l~~~L~~~~  630 (635)
T 4fl3_A          618 GFAAVELRLRNYY  630 (635)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999988888653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.97  E-value=3.7e-30  Score=195.76  Aligned_cols=161  Identities=11%  Similarity=0.147  Sum_probs=121.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc--eEEEccCCCCccCCCCcccc-----ccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF--EIKISDFATDSDMFSSDYYR-----VHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~--~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~   80 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++  .+||+|||+++.........     ......+++.|
T Consensus       163 ~i~~qi~~~L~~LH~~~ivH~Dikp--------~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y  234 (352)
T 2jii_A          163 QVACRLLDALEFLHENEYVHGNVTA--------ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEF  234 (352)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCSCCCG--------GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTT
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCH--------HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccc
Confidence            4678899999999999999999999        999999998  89999999987765432211     11334688899


Q ss_pred             cchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCCCCCcc--cCCCCCChHHHHHHHHH
Q psy4332          81 MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHADDGEFI--YLPTPQTTKDILDLMNE  156 (188)
Q Consensus        81 ~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~  156 (188)
                      +|||.+.+..++.++||||||+++|+++|  |..||.+..  ...................  .......+.++.+++.+
T Consensus       235 ~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  312 (352)
T 2jii_A          235 ISMDLHKGCGPSRRSDLQSLGYCMLKWLY--GFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKV  312 (352)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHH--SCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHH
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHh--CCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHH
Confidence            99999998889999999999999999994  678887653  2222222221111111111  11112457899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhc
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ||..||++||+++++.+.|+++
T Consensus       313 ~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          313 VMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             HHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHhCChhhCCCHHHHHHHHHHH
Confidence            9999999999999998888766

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.97  E-value=3.6e-30  Score=188.95  Aligned_cols=152  Identities=29%  Similarity=0.482  Sum_probs=117.2

Q ss_pred             ccccchhhhhhhhcccc---cccccchhhhhccccccceEEcC--------cceEEEccCCCCccCCCCccccccCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNG---VEHSSLKKKCIKIFDFKNCLVGK--------KFEIKISDFATDSDMFSSDYYRVHDNTSL   76 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~---i~h~~lk~~~i~~~~~~nill~~--------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~   76 (188)
                      .++.+++.++.|+|++|   |+|+||||        +||+++.        ++.+||+|||++.......    .....+
T Consensus       109 ~i~~~l~~~l~~lH~~~~~~i~H~dikp--------~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~  176 (271)
T 3dtc_A          109 NWAVQIARGMNYLHDEAIVPIIHRDLKS--------SNILILQKVENGDLSNKILKITDFGLAREWHRTT----KMSAAG  176 (271)
T ss_dssp             HHHHHHHHHHHHHHHSSSSCCCCSCCSG--------GGEEESSCCSSSCCSSCCEEECCCCC-----------------C
T ss_pred             HHHHHHHHHHHHHHhCCCCceeecCCch--------HHEEEecccccccccCcceEEccCCccccccccc----ccCCCC
Confidence            35678899999999999   89999999        9999985        6789999999987654332    224467


Q ss_pred             CccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          77 PIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        77 ~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      ++.|+|||.+.+..++.++||||+|+++++++  +|..||.+..............     .........++++.+++.+
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~  249 (271)
T 3dtc_A          177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELL--TGEVPFRGIDGLAVAYGVAMNK-----LALPIPSTCPEPFAKLMED  249 (271)
T ss_dssp             CGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHH--HCCCTTTTSCHHHHHHHHHTSC-----CCCCCCTTCCHHHHHHHHH
T ss_pred             ccceeCHHHhccCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHhhhcCC-----CCCCCCcccCHHHHHHHHH
Confidence            88999999999888999999999999999999  4678999887666555544321     1122235668899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhc
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ||..||++|||+.|+.+.|+++
T Consensus       250 ~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          250 CWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HhcCCcccCcCHHHHHHHHhcC
Confidence            9999999999999999998864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=4e-30  Score=189.50  Aligned_cols=155  Identities=30%  Similarity=0.560  Sum_probs=126.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++....... ........++..|+|||.+.
T Consensus       113 ~i~~qi~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~  183 (279)
T 1qpc_A          113 DMAAQIAEGMAFIEERNYIHRDLRA--------ANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAIN  183 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTSCEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCH--------hhEEEcCCCCEEECCCcccccccCcc-cccccCCCCccCccChhhhc
Confidence            4567889999999999999999999        99999999999999999987765432 12223445677899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||.+....+....+.....      .......+.++.+++.+||..||++|||
T Consensus       184 ~~~~~~~~Di~slG~il~el~~-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps  256 (279)
T 1qpc_A          184 YGTFTIKSDVWSFGILLTEIVT-HGRIPYPGMTNPEVIQNLERGYR------MVRPDNCPEELYQLMRLCWKERPEDRPT  256 (279)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHT-TTCCSSTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhhHHHHHHHHHHHh-CCCCCCcccCHHHHHHHHhcccC------CCCcccccHHHHHHHHHHhccChhhCCC
Confidence            8888999999999999999995 26789998887776665543211      1223456889999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       257 ~~~l~~~l~~~  267 (279)
T 1qpc_A          257 FDYLRSVLEDF  267 (279)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998877765

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=1.3e-30  Score=195.96  Aligned_cols=155  Identities=21%  Similarity=0.251  Sum_probs=125.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc----eEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++    .+||+|||++.......   ......+++.|+||
T Consensus       119 ~i~~qi~~aL~~lH~~~ivH~dikp--------~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aP  187 (321)
T 2a2a_A          119 SFIKQILDGVNYLHTKKIAHFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAP  187 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEESCTTSSSCCEEECCCTTCEECCTTC---CCCCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCh--------HHEEEecCCCCcCCEEEccCccceecCccc---cccccCCCCCccCc
Confidence            4567889999999999999999999        999999887    79999999987765432   22345688999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++||||+|+++|+++  +|..||.+....+....+.........   ......+..+.+++.+||..||+
T Consensus       188 E~~~~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~  262 (321)
T 2a2a_A          188 EIVNYEPLGLEADMWSIGVITYILL--SGASPFLGDTKQETLANITSVSYDFDE---EFFSHTSELAKDFIRKLLVKETR  262 (321)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHH--HSCCSSCCSSHHHHHHHHHTTCCCCCH---HHHTTCCHHHHHHHHTTSCSSTT
T ss_pred             ccccCCCCCCccccHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhcccccCh---hhhcccCHHHHHHHHHHcCCChh
Confidence            9999888999999999999999999  467899988877777666543221111   11145678899999999999999


Q ss_pred             CCCCHHHH--HHHHHhc
Q psy4332         164 ERPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~  178 (188)
                      +|||+.|+  |+||+..
T Consensus       263 ~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          263 KRLTIQEALRHPWITPV  279 (321)
T ss_dssp             TSCCHHHHHHSTTTSCS
T ss_pred             hCcCHHHHhcCccccCC
Confidence            99999999  6777644

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=9.8e-31  Score=196.54  Aligned_cols=165  Identities=20%  Similarity=0.190  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       143 ~i~~~i~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  214 (321)
T 2qkw_B          143 EICIGAARGLHYLHTRAIIHRDVKS--------INILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFI  214 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCS--------TTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCeecCCCCH--------HHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhc
Confidence            3567888999999999999999999        99999999999999999987654333222334455788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH------HHHHhh-cccCCC---CCcccCCCCCChHHHHHHHHHH
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE------VLENIS-HLHADD---GEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~------~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~li~~c  157 (188)
                      +..++.++||||+|+++|+++|  |..||.+..+.+      ...... ......   ........+..+.++.+++.+|
T Consensus       215 ~~~~~~~~Di~slG~il~ell~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  292 (321)
T 2qkw_B          215 KGRLTEKSDVYSFGVVLFEVLC--ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC  292 (321)
T ss_dssp             HCBCCTHHHHHHHHHHHHHHHH--CCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHH
T ss_pred             CCCCCcccchHhHHHHHHHHHh--CCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHH
Confidence            8889999999999999999995  567776543211      111110 000000   0000111123467799999999


Q ss_pred             hccCCCCCCCHHHHHHHHHhccCCC
Q psy4332         158 WKRSPTERPSFTEIHLFLQRKNLGY  182 (188)
Q Consensus       158 l~~dp~~Rps~~el~~~l~~~~~~~  182 (188)
                      |+.||++|||+.|+++.|+.+-+..
T Consensus       293 l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          293 LALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             cCCCcccCcCHHHHHHHHHHHhhcc
Confidence            9999999999999998888765433

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=3e-30  Score=190.97  Aligned_cols=152  Identities=24%  Similarity=0.335  Sum_probs=116.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE---cCcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||++   +.++.+||+|||++.......   ......+++.|+|||
T Consensus       128 ~i~~qi~~~L~~LH~~~ivH~dikp--------~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE  196 (285)
T 3is5_A          128 ELMKQMMNALAYFHSQHVVHKDLKP--------ENILFQDTSPHSPIKIIDFGLAELFKSDE---HSTNAAGTALYMAPE  196 (285)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSG--------GGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHH
T ss_pred             HHHHHHHHHHHHHHhCCEEECCCCH--------HHEEEecCCCCCCEEEEeeecceecCCcc---cCcCcccccCcCChH
Confidence            4567889999999999999999999        99999   455789999999987654332   223456788999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+. ..++.++||||+|+++++++  +|..||.+....+..........    .........++++.+++.+||+.||++
T Consensus       197 ~~~-~~~~~~~Di~slG~il~~ll--~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~  269 (285)
T 3is5_A          197 VFK-RDVTFKCDIWSAGVVMYFLL--TGCLPFTGTSLEEVQQKATYKEP----NYAVECRPLTPQAVDLLKQMLTKDPER  269 (285)
T ss_dssp             HHT-TCCCHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC----CCCC--CCCCHHHHHHHHHHTCSCTTT
T ss_pred             Hhc-cCCCcccCeehHHHHHHHHH--hCCCCCCCCCHHHHHhhhccCCc----ccccccCcCCHHHHHHHHHHccCChhh
Confidence            986 56889999999999999999  46789998877666655543221    111122346789999999999999999


Q ss_pred             CCCHHHH--HHHHHh
Q psy4332         165 RPSFTEI--HLFLQR  177 (188)
Q Consensus       165 Rps~~el--~~~l~~  177 (188)
                      |||+.|+  |+||++
T Consensus       270 Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          270 RPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             SCCHHHHHTSGGGGC
T ss_pred             CcCHHHHhcCHHhhc
Confidence            9999999  778875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=1.6e-30  Score=192.41  Aligned_cols=156  Identities=23%  Similarity=0.406  Sum_probs=112.9

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++ ||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+
T Consensus       113 ~i~~qi~~~l~~lH~~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~  181 (290)
T 3fme_A          113 KIAVSIVKALEHLHSKLSVIHRDVKP--------SNVLINALGQVKMCDFGISGYLVDDV---AKDIDAGCKPYMAPERI  181 (290)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCCCCCSG--------GGCEECTTCCEEBCCC------------------CCCCCCSCHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCeecCCCCH--------HHEEECCCCCEEEeecCCcccccccc---cccccCCCccccChhhc
Confidence            4667899999999998 999999999        99999999999999999987664432   22334578889999997


Q ss_pred             ----hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 ----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ----~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                          .+..++.++||||+|+++++++  +|..||... ............     .....+....+.++.+++.+||+.|
T Consensus       182 ~~~~~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~  254 (290)
T 3fme_A          182 NPELNQKGYSVKSDIWSLGITMIELA--ILRFPYDSWGTPFQQLKQVVEE-----PSPQLPADKFSAEFVDFTSQCLKKN  254 (290)
T ss_dssp             SCCTTC--CCHHHHHHHHHHHHHHHH--HTSCSSCCCSCHHHHHHHHHHS-----CCCCCCTTTSCHHHHHHHHHHTCSS
T ss_pred             ChhhcCcCCCcHHHHHHHHHHHHHHH--HCCCCccccCchHHHHHHHhcc-----CCCCcccccCCHHHHHHHHHHhhcC
Confidence                4456888999999999999999  457888764 333333333221     1122233567889999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhccCC
Q psy4332         162 PTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~~~  181 (188)
                      |++|||+.|+  |+||+...+.
T Consensus       255 p~~Rpt~~e~l~hp~f~~~~~~  276 (290)
T 3fme_A          255 SKERPTYPELMQHPFFTLHESK  276 (290)
T ss_dssp             GGGSCCHHHHTTSHHHHHHHHS
T ss_pred             hhhCcCHHHHHhCcccccCccc
Confidence            9999999999  8899876543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=6.5e-31  Score=204.94  Aligned_cols=157  Identities=14%  Similarity=0.201  Sum_probs=126.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh-
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-   87 (188)
                      .+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++....... .......||+.|+|||++. 
T Consensus       180 ~~~qi~~aL~~LH~~giiHrDLKp--------~NILl~~~g~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~  250 (437)
T 4aw2_A          180 YLAEMVIAIDSVHQLHYVHRDIKP--------DNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQA  250 (437)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCeEecccCH--------HHeeEcCCCCEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhh
Confidence            567889999999999999999999        999999999999999999876654332 2234467899999999997 


Q ss_pred             ----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 ----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                          ...++.++||||+|+++|||+  +|..||.+....+....+.........  .......++++.+++.+||..+|+
T Consensus       251 ~~~~~~~~~~~~DvwSlGvil~ell--tG~~Pf~~~~~~~~~~~i~~~~~~~~~--p~~~~~~s~~~~dLi~~lL~~~~~  326 (437)
T 4aw2_A          251 MEGGKGRYGPECDWWSLGVCMYEML--YGETPFYAESLVETYGKIMNHKERFQF--PTQVTDVSENAKDLIRRLICSREH  326 (437)
T ss_dssp             HHTSCCEECTHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHTHHHHCCC--CSSCCCSCHHHHHHHHTTSSCGGG
T ss_pred             cccCCCCCCCcCeeHHHHHHHHHHH--hCCCCCCCCChhHHHHhhhhccccccC--CcccccCCHHHHHHHHHHhccccc
Confidence                345889999999999999999  567999998887777776542211110  111135788999999999988888


Q ss_pred             C--CCCHHHH--HHHHHhc
Q psy4332         164 E--RPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~--Rps~~el--~~~l~~~  178 (188)
                      +  |++++|+  |+||+.+
T Consensus       327 r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          327 RLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             CTTTTTTHHHHTSGGGTTC
T ss_pred             ccCCCCHHHHhCCCccCCC
Confidence            8  9999999  8999865

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=2.4e-30  Score=194.84  Aligned_cols=156  Identities=34%  Similarity=0.551  Sum_probs=124.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+.
T Consensus       146 ~i~~qi~~aL~~LH~~~ivH~dlkp--------~NIl~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  214 (327)
T 1fvr_A          146 HFAADVARGMDYLSQKQFIHRDLAA--------RNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLN  214 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCcc--------ceEEEcCCCeEEEcccCcCccccccc---cccCCCCCccccChhhhc
Confidence            4567889999999999999999999        99999999999999999986443211   222334567899999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+.++.+++.+||..||++||+
T Consensus       215 ~~~~~~~~Di~slG~il~ellt-~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps  287 (327)
T 1fvr_A          215 YSVYTTNSDVWSYGVLLWEIVS-LGGTPYCGMTCAELYEKLPQGYR------LEKPLNCDDEVYDLMRQCWREKPYERPS  287 (327)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHGGGTCC------CCCCTTBCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cccCCchhcchHHHHHHHHHHc-CCCCCCCCCcHHHHHHHhhcCCC------CCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence            8888999999999999999994 27899999887777666543211      1122456789999999999999999999


Q ss_pred             HHHHHHHHHhccCC
Q psy4332         168 FTEIHLFLQRKNLG  181 (188)
Q Consensus       168 ~~el~~~l~~~~~~  181 (188)
                      ++++...|+++-..
T Consensus       288 ~~ell~~L~~~~~~  301 (327)
T 1fvr_A          288 FAQILVSLNRMLEE  301 (327)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHh
Confidence            99998888876443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=3.5e-30  Score=189.77  Aligned_cols=154  Identities=29%  Similarity=0.494  Sum_probs=120.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......     ....+++.|+|||.+.
T Consensus       121 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~  187 (278)
T 1byg_A          121 KFSLDVCEAMEYLEGNNFVHRDLAA--------RNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALR  187 (278)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccccCCCc--------ceEEEeCCCcEEEeeccccccccccc-----cCCCccccccCHHHhC
Confidence            4567889999999999999999999        99999999999999999987554321     2334567899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++| .|..||......+....+....      ........+.++.+++.+||..||++||+
T Consensus       188 ~~~~~~~~Di~slG~il~~l~t-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps  260 (278)
T 1byg_A          188 EKKFSTKSDVWSFGILLWEIYS-FGRVPYPRIPLKDVVPRVEKGY------KMDAPDGCPPAVYEVMKNCWHLDAAMRPS  260 (278)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCSCTTSCGGGHHHHHTTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhcHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHhcCC------CCCCcccCCHHHHHHHHHHhcCChhhCCC
Confidence            8889999999999999999995 2678998877666555554321      11223456889999999999999999999


Q ss_pred             HHHHHHHHHhccCC
Q psy4332         168 FTEIHLFLQRKNLG  181 (188)
Q Consensus       168 ~~el~~~l~~~~~~  181 (188)
                      +.++.+.|+++...
T Consensus       261 ~~~l~~~L~~i~~~  274 (278)
T 1byg_A          261 FLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999987543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=3.2e-30  Score=190.75  Aligned_cols=155  Identities=34%  Similarity=0.617  Sum_probs=125.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.++|+|||++........ .......+++.|+|||.+.
T Consensus       115 ~i~~~i~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  185 (288)
T 3kfa_A          115 YMATQISSAMEYLEKKNFIHRDLAA--------RNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLA  185 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCSCCSG--------GGEEECGGGCEEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCCCCc--------ceEEEcCCCCEEEccCccceeccCCcc-ccccCCccccCcCChhhhc
Confidence            3467889999999999999999999        999999999999999999876643321 2233444567899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .|..||.+.........+....      ........+.++.+++.+||..||++||+
T Consensus       186 ~~~~~~~~Di~slG~il~~ll~-~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps  258 (288)
T 3kfa_A          186 YNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDY------RMERPEGCPEKVYELMRACWQWNPSDRPS  258 (288)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCGGGHHHHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHhccC------CCCCCCCCCHHHHHHHHHHhCCChhhCcC
Confidence            8899999999999999999995 2678998877666555554321      11223456889999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++++.|+++
T Consensus       259 ~~~~~~~l~~~  269 (288)
T 3kfa_A          259 FAEIHQAFETM  269 (288)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998888765

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=4e-30  Score=195.60  Aligned_cols=158  Identities=19%  Similarity=0.218  Sum_probs=120.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++......     .....+++.|+|||.+.
T Consensus       130 ~i~~qi~~al~~LH~~~ivH~dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~  196 (353)
T 3coi_A          130 YLVYQMLKGLKYIHSAGVVHRDLKP--------GNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVIL  196 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCCG--------GGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHS
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEeECCCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHh
Confidence            3567889999999999999999999        9999999999999999998765322     23445788899999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC------------------------CCcccCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD------------------------GEFIYLP  142 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~  142 (188)
                      + ..++.++||||+|+++++++  +|..||.+....+....+.......                        .......
T Consensus       197 ~~~~~~~~~Di~slG~il~el~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (353)
T 3coi_A          197 SWMHYNQTVDIWSVGCIMAEML--TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQL  274 (353)
T ss_dssp             CCSCCCTTHHHHHHHHHHHHHH--HSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTT
T ss_pred             CcCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHh
Confidence            6 56889999999999999999  4678998877665554443211100                        0011112


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      .+..+.++.+++.+||..||++||++.++  |+||+....
T Consensus       275 ~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  314 (353)
T 3coi_A          275 FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD  314 (353)
T ss_dssp             CTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred             cCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccC
Confidence            24568899999999999999999999999  889987644

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=2e-30  Score=199.28  Aligned_cols=156  Identities=20%  Similarity=0.257  Sum_probs=119.0

Q ss_pred             ccccchhhhhhhhc--ccccccccchhhhhccccccceEEc--CcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRN--KNGVEHSSLKKKCIKIFDFKNCLVG--KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh--~~~i~h~~lk~~~i~~~~~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.|+.|+|  +.||+||||||        +||+++  .++.+||+|||++......     .....+|+.|+||
T Consensus       161 ~i~~qi~~al~~lH~~~~~ivHrDlkp--------~NIll~~~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aP  227 (382)
T 2vx3_A          161 KFAQQMCTALLFLATPELSIIHCDLKP--------ENILLCNPKRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSP  227 (382)
T ss_dssp             HHHHHHHHHHHHHTSTTTCEECCCCSG--------GGEEESSTTSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCH
T ss_pred             HHHHHHHHHHHHhccCCCCEEcCCCCc--------ccEEEecCCCCcEEEEeccCceecccc-----cccccCCccccCh
Confidence            46778899999999  57999999999        999995  4678999999998766432     2345678899999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc------------------------
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI------------------------  139 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------  139 (188)
                      |++.+..++.++||||+|+++|+++  +|..||.+....+....+...........                        
T Consensus       228 E~~~~~~~~~~~DiwSlG~il~ell--tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (382)
T 2vx3_A          228 EVLLGMPYDLAIDMWSLGCILVEMH--TGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKT  305 (382)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCC
T ss_pred             HHHcCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccc
Confidence            9999888999999999999999999  46789998877666555543211110000                        


Q ss_pred             ------c-CCC----------------------C----CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         140 ------Y-LPT----------------------P----QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       140 ------~-~~~----------------------~----~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                            . .+.                      .    ....++.+|+.+||+.||++|||++|+  |+||++.
T Consensus       306 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          306 KDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             CTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             cccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                  0 000                      0    001478999999999999999999999  8898764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=2e-30  Score=198.19  Aligned_cols=153  Identities=19%  Similarity=0.289  Sum_probs=122.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+|+||        .||+++.++.+||+|||++.......   ......+|+.|+|||++.
T Consensus       204 ~i~~qi~~~L~~LH~~gi~H~Dlkp--------~NIl~~~~~~ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~  272 (365)
T 2y7j_A          204 SIMRSLLEAVSFLHANNIVHRDLKP--------ENILLDDNMQIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILK  272 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEECCCCCEEEEecCcccccCCCc---ccccCCCCCCccChhhcc
Confidence            4567889999999999999999999        99999999999999999987765432   223556889999999986


Q ss_pred             cC------CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          88 LR------KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        88 ~~------~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +.      .++.++||||+|+++|+++  +|..||.+.........+........   .......+.++.+++.+||..|
T Consensus       273 ~~~~~~~~~~~~~~Di~slG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~d  347 (365)
T 2y7j_A          273 CSMDETHPGYGKEVDLWACGVILFTLL--AGSPPFWHRRQILMLRMIMEGQYQFS---SPEWDDRSSTVKDLISRLLQVD  347 (365)
T ss_dssp             HTTCTTSCCBCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCCCC---HHHHSSSCHHHHHHHHHHSCSS
T ss_pred             ccccccCcCCCchhhHHhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhCCCCCC---CcccccCCHHHHHHHHHHcCCC
Confidence            43      4788999999999999999  56789988877666665544322111   1111356778999999999999


Q ss_pred             CCCCCCHHHH--HHHHH
Q psy4332         162 PTERPSFTEI--HLFLQ  176 (188)
Q Consensus       162 p~~Rps~~el--~~~l~  176 (188)
                      |++||++.++  |+||+
T Consensus       348 P~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          348 PEARLTAEQALQHPFFE  364 (365)
T ss_dssp             TTTSCCHHHHHHSGGGC
T ss_pred             hhHCcCHHHHhcCcccC
Confidence            9999999999  67775

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=7.3e-31  Score=203.32  Aligned_cols=157  Identities=15%  Similarity=0.214  Sum_probs=124.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++....... .......||+.|+|||++.
T Consensus       166 ~~~~qi~~aL~~LH~~giiHrDLKp--------~NILld~~g~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          166 FYLAEIVMAIDSVHRLGYVHRDIKP--------DNILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeecccCH--------HHeeecCCCCEEEeechhheeccCCCc-cccceeccccCcCCHHHHh
Confidence            3567899999999999999999999        999999999999999999877654332 1223457899999999997


Q ss_pred             c-------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          88 L-------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        88 ~-------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .       ..++.++|+||+|+++|||+  +|..||.+....+...++........  .......++.++.+++.+||. 
T Consensus       237 ~~~~~~~~~~~~~~~DiwSlGvilyell--tG~~Pf~~~~~~~~~~~i~~~~~~~~--~p~~~~~~s~~~~dli~~lL~-  311 (412)
T 2vd5_A          237 AVGGGPGTGSYGPECDWWALGVFAYEMF--YGQTPFYADSTAETYGKIVHYKEHLS--LPLVDEGVPEEARDFIQRLLC-  311 (412)
T ss_dssp             HHHTCTTCSEECTHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHTHHHHCC--CC----CCCHHHHHHHHTTSS-
T ss_pred             hcccCcCCCCCChHHhhhHHhHHHHHHH--hCCCCCCCCCHHHHHHHHHhcccCcC--CCccccCCCHHHHHHHHHHcC-
Confidence            3       45789999999999999999  56789999888777777654221110  011124678899999999999 


Q ss_pred             CCCCC---CCHHHH--HHHHHhc
Q psy4332         161 SPTER---PSFTEI--HLFLQRK  178 (188)
Q Consensus       161 dp~~R---ps~~el--~~~l~~~  178 (188)
                      +|++|   ++++|+  |+||+.+
T Consensus       312 ~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          312 PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             ChhhcCCCCCHHHHhcCCCcCCC
Confidence            99998   589999  8999876

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=1.7e-30  Score=196.07  Aligned_cols=159  Identities=21%  Similarity=0.296  Sum_probs=117.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........  ......++..|+|||.+.
T Consensus       128 ~~~~qi~~~l~~LH~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~  197 (331)
T 4aaa_A          128 KYLFQIINGIGFCHSHNIIHRDIKP--------ENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLV  197 (331)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCEEccCcCh--------heEEEcCCCcEEEEeCCCceeecCCcc--ccCCCcCCccccCccccc
Confidence            4567889999999999999999999        999999999999999999876643321  223456788899999998


Q ss_pred             cC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC---------------CCc---------ccCC
Q psy4332          88 LR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD---------------GEF---------IYLP  142 (188)
Q Consensus        88 ~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~---------------~~~---------~~~~  142 (188)
                      +. .++.++||||+|+++|++++  |..||.+....+....+.......               ...         ....
T Consensus       198 ~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (331)
T 4aaa_A          198 GDVKYGKAVDVWAIGCLVTEMFM--GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERR  275 (331)
T ss_dssp             TCTTCCTHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhc
Confidence            65 68899999999999999994  578998887655544433211100               000         0001


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      .+..++++.+++.+||+.||++|||+.|+  |+||+..
T Consensus       276 ~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          276 YPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             STTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            13567899999999999999999999999  8898854

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=1.7e-30  Score=197.47  Aligned_cols=157  Identities=18%  Similarity=0.228  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.   ++.+||+|||++.......   ......+|+.|+|||
T Consensus       152 ~i~~qi~~~L~~LH~~~ivH~Dikp--------~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE  220 (349)
T 2w4o_A          152 DAVKQILEAVAYLHENGIVHRDLKP--------ENLLYATPAPDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPE  220 (349)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEESSSSTTCCEEECCCC-------------------CGGGSCHH
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCc--------ccEEEecCCCCCCEEEccCccccccCccc---ccccccCCCCccCHH
Confidence            4567889999999999999999999        9999975   7889999999987654322   223456889999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+..... ....+.....   ..........+.++.+++.+||..||+
T Consensus       221 ~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~  295 (349)
T 2w4o_A          221 ILRGCAYGPEVDMWSVGIITYILL--CGFEPFYDERGDQFMFRRILNCEY---YFISPWWDEVSLNAKDLVRKLIVLDPK  295 (349)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHH--HSSCTTCCTTCHHHHHHHHHTTCC---CCCTTTTTTSCHHHHHHHHTTSCSSGG
T ss_pred             HhcCCCCCcccchHHHHHHHHHHH--hCCCCCCCCcccHHHHHHHHhCCC---ccCCchhhhCCHHHHHHHHHHccCChh
Confidence            999888999999999999999999  4678887765433 4444443221   111122345788999999999999999


Q ss_pred             CCCCHHHH--HHHHHhccC
Q psy4332         164 ERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~~  180 (188)
                      +||++.|+  |+||+....
T Consensus       296 ~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          296 KRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             GSCCHHHHHHSTTTTSTTC
T ss_pred             hCcCHHHHhcCcccCCCcc
Confidence            99999999  678876544

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=1.4e-30  Score=205.74  Aligned_cols=156  Identities=22%  Similarity=0.299  Sum_probs=126.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE---cCcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|+|++||+|+||||        +||++   +.++.+||+|||++........   .....+|+.|+|||
T Consensus       130 ~i~~qi~~~l~~lH~~~ivH~Dlkp--------~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE  198 (484)
T 3nyv_A          130 RIIRQVLSGITYMHKNKIVHRDLKP--------ENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPE  198 (484)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEESSSSTTCCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHH
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCH--------HHEEEecCCCCCcEEEEeeeeeEEcccccc---cccCCCCccccCce
Confidence            4577899999999999999999999        99999   4678899999999876643321   12345888999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+ .++.++||||+|+++|+++  +|..||.+....+....+........   .......++++.+++.+||..||++
T Consensus       199 ~~~~-~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~~L~~dp~~  272 (484)
T 3nyv_A          199 VLHG-TYDEKCDVWSTGVILYILL--SGCPPFNGANEYDILKKVEKGKYTFE---LPQWKKVSESAKDLIRKMLTYVPSM  272 (484)
T ss_dssp             HHHT-CCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCCCC---SGGGGGSCHHHHHHHHHHTCSSGGG
T ss_pred             eecC-CCCCcceeHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHcCCCCCC---CcccccCCHHHHHHHHHHCCCChhH
Confidence            9975 6899999999999999999  56799999988887777765432211   1112456789999999999999999


Q ss_pred             CCCHHHH--HHHHHhccC
Q psy4332         165 RPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~  180 (188)
                      |||+.|+  |+||++...
T Consensus       273 R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          273 RISARDALDHEWIQTYTK  290 (484)
T ss_dssp             SCCHHHHHTSHHHHHHTC
T ss_pred             CcCHHHHhhChhhccccc
Confidence            9999999  899997654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=6.8e-30  Score=202.29  Aligned_cols=154  Identities=24%  Similarity=0.308  Sum_probs=125.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++..   +.+||+|||++.......   ......+|+.|+|||
T Consensus       140 ~i~~qi~~~l~~lH~~~ivH~Dlkp--------~Nil~~~~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE  208 (494)
T 3lij_A          140 VIIKQVLSGVTYLHKHNIVHRDLKP--------ENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPE  208 (494)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEESCSSTTCCEEECCCTTCEECBTTB---CBCCCCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCh--------hhEEEeCCCCCCcEEEEECCCCeECCCCc---cccccCCCcCeeCHH
Confidence            4567889999999999999999999        99999764   459999999987765432   234556889999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      ++. ..++.++||||+|+++|+++  +|..||.+....+....+.........   ......+.++.+++.+||..||++
T Consensus       209 ~l~-~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~  282 (494)
T 3lij_A          209 VLR-KKYDEKCDVWSIGVILFILL--AGYPPFGGQTDQEILRKVEKGKYTFDS---PEWKNVSEGAKDLIKQMLQFDSQR  282 (494)
T ss_dssp             HHT-TCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCCCCS---GGGTTSCHHHHHHHHHHTCSSTTT
T ss_pred             HHc-ccCCCchhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCCCCc---hhcccCCHHHHHHHHHHCCCChhh
Confidence            986 56899999999999999999  567999999888877777654322211   122456889999999999999999


Q ss_pred             CCCHHHH--HHHHHhc
Q psy4332         165 RPSFTEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~~el--~~~l~~~  178 (188)
                      |||+.++  |+||++.
T Consensus       283 R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          283 RISAQQALEHPWIKEM  298 (494)
T ss_dssp             SCCHHHHHTCHHHHHH
T ss_pred             CccHHHHhcCcccccC
Confidence            9999999  8899865

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=1.6e-30  Score=198.56  Aligned_cols=153  Identities=22%  Similarity=0.298  Sum_probs=109.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce--EEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE--IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.  +||+|||+++......   ......+|+.|+|||.
T Consensus       120 ~i~~ql~~~L~~LH~~~ivH~Dlkp--------~Nill~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~  188 (361)
T 3uc3_A          120 FFFQQLLSGVSYCHSMQICHRDLKL--------ENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEV  188 (361)
T ss_dssp             HHHHHHHHHHHHHHHTTCCSCCCCG--------GGEEECSSSSCCEEECCCCCC------------------CTTSCHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEEcCCCCceEEEeecCccccccccC---CCCCCcCCCCcCChhh
Confidence            4567899999999999999999999        9999987765  9999999987443222   2234568899999999


Q ss_pred             hhcCCCCCh-hhHHHHHHHHHHHHhCCCCCCCCCCCH----HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          86 VRLRKFTTK-SDVWSFGVTLWEILNLARHRPYEGLTD----LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        86 ~~~~~~~~~-~di~slG~~~~~l~t~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      +.+..+..+ +||||+|+++|+++  +|..||.+...    ......+....     .........+.++.+++.+||..
T Consensus       189 ~~~~~~~~~~~DiwslG~il~ell--~g~~Pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~li~~~L~~  261 (361)
T 3uc3_A          189 LLRQEYDGKIADVWSCGVTLYVML--VGAYPFEDPEEPRDYRKTIQRILSVK-----YSIPDDIRISPECCHLISRIFVA  261 (361)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHH--HSSCSCC----CCCHHHHHHHHHTTC-----CCCCTTSCCCHHHHHHHHHHSCS
T ss_pred             hcCCCCCCCeeeeehhHHHHHHHH--hCCCCCCCCccHHHHHHHHHHHhcCC-----CCCCCcCCCCHHHHHHHHHHccC
Confidence            987777655 89999999999999  56789976532    23333333211     11222235688999999999999


Q ss_pred             CCCCCCCHHHH--HHHHHhc
Q psy4332         161 SPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~~  178 (188)
                      ||++|||+.|+  |+||.+.
T Consensus       262 dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          262 DPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             CTTTSCCHHHHHTSHHHHTT
T ss_pred             ChhHCcCHHHHHhCcchhcC
Confidence            99999999999  8898643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=5.7e-30  Score=191.65  Aligned_cols=156  Identities=16%  Similarity=0.217  Sum_probs=114.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......+++.|+|||.+
T Consensus       120 ~~~~qi~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  191 (311)
T 3ork_A          120 EVIADACQALNFSHQNGIIHRDVKP--------ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA  191 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEEETTSCEEECCCSCC------------------CCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCcCCCCH--------HHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHh
Confidence            4567889999999999999999999        9999999999999999998766543221 122344578899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+|+++|+++|  |..||.+...............   ..........+.++.+++.+||+.||++||
T Consensus       192 ~~~~~~~~~Di~slG~~l~~ll~--g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dP~~R~  266 (311)
T 3ork_A          192 RGDSVDARSDVYSLGCVLYEVLT--GEPPFTGDSPVSVAYQHVREDP---IPPSARHEGLSADLDAVVLKALAKNPENRY  266 (311)
T ss_dssp             HTCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHCCC---CCHHHHSTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHhcCCC---CCcccccCCCCHHHHHHHHHHHhcCHhhCh
Confidence            98889999999999999999994  6789998887666555443221   111112245788999999999999999999


Q ss_pred             CHHHH--HHHHH
Q psy4332         167 SFTEI--HLFLQ  176 (188)
Q Consensus       167 s~~el--~~~l~  176 (188)
                      +..++  +++++
T Consensus       267 ~~~~~l~~~l~~  278 (311)
T 3ork_A          267 QTAAEMRADLVR  278 (311)
T ss_dssp             SSHHHHHHHHHH
T ss_pred             hhHHHHHHHHHH
Confidence            76655  44544

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=1.1e-29  Score=188.50  Aligned_cols=154  Identities=19%  Similarity=0.268  Sum_probs=125.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........  ......+++.|+|||.+.
T Consensus       119 ~i~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  188 (294)
T 2rku_A          119 YYLRQIVLGCQYLHRNRVIHRDLKL--------GNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLS  188 (294)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCh--------HhEEEcCCCCEEEEeccCceecccCcc--ccccccCCCCcCCcchhc
Confidence            4567899999999999999999999        999999999999999999876643321  223456788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++  +|..||......+....+.....       ......+..+.+++.+||..||++||+
T Consensus       189 ~~~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps  259 (294)
T 2rku_A          189 KKGHSFEVDVWSIGCIMYTLL--VGKPPFETSCLKETYLRIKKNEY-------SIPKHINPVAASLIQKMLQTDPTARPT  259 (294)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHTTCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhhccC-------CCccccCHHHHHHHHHHcccChhhCcC
Confidence            888899999999999999999  46789988876666555543211       112356789999999999999999999


Q ss_pred             HHHH--HHHHHhccC
Q psy4332         168 FTEI--HLFLQRKNL  180 (188)
Q Consensus       168 ~~el--~~~l~~~~~  180 (188)
                      ++++  |+||++...
T Consensus       260 ~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          260 INELLNDEFFTSGYI  274 (294)
T ss_dssp             GGGGGGSHHHHTSCC
T ss_pred             HHHHhhChheecCCc
Confidence            9999  789986543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=9.6e-30  Score=192.30  Aligned_cols=154  Identities=19%  Similarity=0.268  Sum_probs=125.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........  ......++..|+|||.+.
T Consensus       145 ~i~~qi~~aL~~LH~~~ivH~dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~  214 (335)
T 2owb_A          145 YYLRQIVLGCQYLHRNRVIHRDLKL--------GNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLS  214 (335)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCEecCCCc--------hhEEEcCCCCEEEeeccCceecccCcc--cccccCCCccccCHHHhc
Confidence            4567899999999999999999999        999999999999999999876643321  223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  +|..||......+....+.....       ......+.++.+++.+||+.||++||+
T Consensus       215 ~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps  285 (335)
T 2owb_A          215 KKGHSFEVDVWSIGCIMYTLL--VGKPPFETSCLKETYLRIKKNEY-------SIPKHINPVAASLIQKMLQTDPTARPT  285 (335)
T ss_dssp             TSCBCTHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHTCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCchhhHHHHHHHHHHHH--HCcCCCCCCCHHHHHHHHhcCCC-------CCCccCCHHHHHHHHHHccCChhHCcC
Confidence            888999999999999999999  46789988776666555543221       112356789999999999999999999


Q ss_pred             HHHH--HHHHHhccC
Q psy4332         168 FTEI--HLFLQRKNL  180 (188)
Q Consensus       168 ~~el--~~~l~~~~~  180 (188)
                      ++|+  |+||++...
T Consensus       286 ~~ell~~~~~~~~~~  300 (335)
T 2owb_A          286 INELLNDEFFTSGYI  300 (335)
T ss_dssp             GGGGGGSHHHHTSCC
T ss_pred             HHHHhcCccccCCCc
Confidence            9999  789986543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=4.3e-31  Score=197.53  Aligned_cols=154  Identities=22%  Similarity=0.331  Sum_probs=117.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc------------ccCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR------------VHDNTS   75 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~------------~~~~~~   75 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++..........            ......
T Consensus       112 ~i~~qi~~al~~lH~~~ivH~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (310)
T 3s95_A          112 SFAKDIASGMAYLHSMNIIHRDLNS--------HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV  183 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCST--------TSEEECTTSCEEECCCTTCEECC--------------------CCCC
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCc--------CeEEECCCCCEEEeecccceecccccccccccccccccccccccccC
Confidence            4567899999999999999999999        99999999999999999987664332111            112456


Q ss_pred             CCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-----HHHHhhcccCCCCCcccCCCCCChHHH
Q psy4332          76 LPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-----VLENISHLHADDGEFIYLPTPQTTKDI  150 (188)
Q Consensus        76 ~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (188)
                      ||+.|+|||.+.+..++.++||||+|+++|++++  +..||.......     ......         .......++.++
T Consensus       184 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~--g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l  252 (310)
T 3s95_A          184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG--RVNADPDYLPRTMDFGLNVRGFL---------DRYCPPNCPPSF  252 (310)
T ss_dssp             SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH--TCCSSTTTSCBCTTSSBCHHHHH---------HHTCCTTCCTTH
T ss_pred             CCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc--CCCCCcchhhhHHHHhhhhhccc---------cccCCCCCCHHH
Confidence            8999999999998889999999999999999995  455655432110     000000         011124566789


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         151 LDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       151 ~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .+++.+||+.||++|||+.++.++|+++..
T Consensus       253 ~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          253 FPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999987754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=2.6e-30  Score=197.08  Aligned_cols=160  Identities=21%  Similarity=0.221  Sum_probs=117.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+.
T Consensus       138 ~~~~qi~~~l~~lH~~~ivH~Dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~  206 (362)
T 3pg1_A          138 YFMYHILLGLHVLHEAGVVHRDLHP--------GNILLADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVM  206 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECCTTC------------------CGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCcCEecCCCh--------HHEEEcCCCCEEEEecCccccccccc---ccceecccceecCcHHhc
Confidence            3567899999999999999999999        99999999999999999987543322   223456788899999987


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC-------------------------cccC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE-------------------------FIYL  141 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~  141 (188)
                      + ..++.++||||+|+++|+++  +|..||.+....+....+.........                         ....
T Consensus       207 ~~~~~~~~~DiwslG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (362)
T 3pg1_A          207 QFKGFTKLVDMWSAGCVMAEMF--NRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTA  284 (362)
T ss_dssp             TCTTCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHH
T ss_pred             CCCCCCcHhHHHhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHh
Confidence            6 56899999999999999999  567899988766655554322111100                         0000


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ..+..+..+.+++.+||+.||++|||+.|+  |+||+++..
T Consensus       285 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  325 (362)
T 3pg1_A          285 VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD  325 (362)
T ss_dssp             HSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence            123457789999999999999999999999  889997744

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=7.9e-30  Score=191.77  Aligned_cols=154  Identities=20%  Similarity=0.306  Sum_probs=116.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus       133 ~i~~qi~~~l~~lH~~~ivH~dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          133 YICREILRGLSHLHQHKVIHRDIKG--------QNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSG--------GGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC
T ss_pred             HHHHHHHHHHHHHHHCCccccCCcH--------HHEEEcCCCCEEEeeCcCceecCcCc--cccccccCCccccChhhhc
Confidence            3567899999999999999999999        99999999999999999987654322  1223446788999999986


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                           +..++.++||||+|+++|+++  +|..||.+.........+....     .........+..+.+++.+||..||
T Consensus       203 ~~~~~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp  275 (326)
T 2x7f_A          203 CDENPDATYDFKSDLWSLGITAIEMA--EGAPPLCDMHPMRALFLIPRNP-----APRLKSKKWSKKFQSFIESCLVKNH  275 (326)
T ss_dssp             --------CCTTHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSC-----CCCCSCSCSCHHHHHHHHHHCCSSG
T ss_pred             cccccCcCCCccchHHHHHHHHHHHH--hCCCCCCCCcHHHHHHHhhcCc-----cccCCccccCHHHHHHHHHHhccCh
Confidence                 456888999999999999999  4678998877665554443221     1122235568899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhc
Q psy4332         163 TERPSFTEI--HLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~  178 (188)
                      ++||++.++  |+||++.
T Consensus       276 ~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          276 SQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             GGSCCHHHHHTSHHHHCC
T ss_pred             hhCCCHHHHhhChHHhhC
Confidence            999999999  7888754

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.96  E-value=9.5e-31  Score=206.24  Aligned_cols=159  Identities=16%  Similarity=0.206  Sum_probs=122.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE---cCcceEEEccCCCCccCCCCcc-----ccccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDFATDSDMFSSDY-----YRVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill---~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~   79 (188)
                      .++.+|+.++.|||++||+|+||||        +|||+   +.++.+||+|||+++.......     +.......+|..
T Consensus       107 ~i~~qi~~aL~yLH~~gIvHrDIKP--------~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~  178 (483)
T 3sv0_A          107 MLADQMINRVEFVHSKSFLHRDIKP--------DNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR  178 (483)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTT
T ss_pred             HHHHHHHHHHHHHHHCCEeecccCc--------ceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCcc
Confidence            4677899999999999999999999        99999   5788999999999887654322     112235668899


Q ss_pred             ccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH---HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD---LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      |++||.+.+..++.++||||||+++|+|+  +|..||.+...   .+....+.........  ......++.++.+++.+
T Consensus       179 Y~aPE~~~~~~~s~~sDvwSlGvil~ell--tG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~p~~l~~li~~  254 (483)
T 3sv0_A          179 YASVNTHLGIEQSRRDDLESLGYVLMYFL--RGSLPWQGLKAGTKKQKYEKISEKKVATSI--EALCRGYPTEFASYFHY  254 (483)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHH--HSSCTTSSCCCSSHHHHHHHHHHHHHHSCH--HHHHTTSCHHHHHHHHH
T ss_pred             ccCHHHhcCCCCChHHHHHHHHHHHHHHH--hCCCCCccccchhHHHHHHHHhhccccccH--HHHhcCCcHHHHHHHHH
Confidence            99999999889999999999999999999  56789987542   2223322211110000  00113457899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhc
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ||..+|++||++.+|.+.|+++
T Consensus       255 cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          255 CRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HhcCChhhCcCHHHHHHHHHHH
Confidence            9999999999999998887766

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.96  E-value=4.1e-30  Score=193.61  Aligned_cols=156  Identities=31%  Similarity=0.559  Sum_probs=122.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.   +..+||+|||++................+++.|+|||
T Consensus       144 ~i~~qi~~al~~LH~~~i~H~dlkp--------~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          144 HVARDIACGCQYLEENHFIHRDIAA--------RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE  215 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHhhCCeecCcCCH--------hHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHh
Confidence            3567899999999999999999999        9999984   4469999999876543332222233445678899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||+|+++|+++| .|..||.+....+....+.....      .......+..+.+++.+||..||++
T Consensus       216 ~~~~~~~~~~~Di~slG~il~ellt-~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~  288 (327)
T 2yfx_A          216 AFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVTSGGR------MDPPKNCPGPVYRIMTQCWQHQPED  288 (327)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCCCCCchhhHHHHHHHHHHHHc-CCCCCCCCcCHHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHhcCChhh
Confidence            9998889999999999999999995 26789988887776666543221      1223456889999999999999999


Q ss_pred             CCCHHHHHHHHHhc
Q psy4332         165 RPSFTEIHLFLQRK  178 (188)
Q Consensus       165 Rps~~el~~~l~~~  178 (188)
                      ||++.++.+.|+.+
T Consensus       289 Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          289 RPNFAIILERIEYC  302 (327)
T ss_dssp             SCCHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHH
Confidence            99999998877755

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=4.1e-30  Score=192.56  Aligned_cols=168  Identities=17%  Similarity=0.193  Sum_probs=121.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++ .++.+||+|||++......... .......++..|+|||.
T Consensus       124 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (320)
T 2i6l_A          124 LFMYQLLRGLKYIHSANVLHRDLKP--------ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL  195 (320)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCSG--------GGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCH--------HHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHH
Confidence            3567899999999999999999999        999997 5679999999998766432111 11223345778999999


Q ss_pred             hhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC-----------------------CcccC
Q psy4332          86 VRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG-----------------------EFIYL  141 (188)
Q Consensus        86 ~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~  141 (188)
                      +.+ ..++.++||||+|+++|+++|  |..||.+....+....+........                       .....
T Consensus       196 ~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (320)
T 2i6l_A          196 LLSPNNYTKAIDMWAAGCIFAEMLT--GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ  273 (320)
T ss_dssp             HHCTTCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHH
T ss_pred             hcCcccCCchhhhHhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhH
Confidence            875 568899999999999999994  6789988876655544432211000                       00000


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP  185 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~  185 (188)
                      ..+..+.++.+++.+||+.||++||+++|+  |+||+...-...+|
T Consensus       274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~~~  319 (320)
T 2i6l_A          274 LLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEP  319 (320)
T ss_dssp             HSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-----
T ss_pred             hcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccCCC
Confidence            123568899999999999999999999999  89999876655554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=3e-30  Score=199.67  Aligned_cols=162  Identities=16%  Similarity=0.134  Sum_probs=112.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE----cCcceEEEccCCCCccCCCCccc-cccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV----GKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill----~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~   82 (188)
                      .++.+|+.|+.|||++||+||||||        +||++    +.++.+||+|||++......... .......+|+.|+|
T Consensus       132 ~i~~qi~~al~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  203 (405)
T 3rgf_A          132 SLLYQILDGIHYLHANWVLHRDLKP--------ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  203 (405)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCC
T ss_pred             HHHHHHHHHHHHHHhCCEeCCCcCH--------HHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccC
Confidence            4567899999999999999999999        99999    67789999999998876433211 12234567899999


Q ss_pred             hhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH---------HHHHHhhcccCCCCCcc-------------
Q psy4332          83 WESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL---------EVLENISHLHADDGEFI-------------  139 (188)
Q Consensus        83 Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~---------~~~~~~~~~~~~~~~~~-------------  139 (188)
                      ||++.+. .++.++||||+||++|+|+  +|..||.+....         +....+......+....             
T Consensus       204 PE~~~~~~~~~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  281 (405)
T 3rgf_A          204 PELLLGARHYTKAIDIWAIGCIFAELL--TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  281 (405)
T ss_dssp             HHHHTTCCSCCHHHHHHHHHHHHHHHH--HSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHH
T ss_pred             chhhcCCCcccchhhhHHHHHHHHHHH--hCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhh
Confidence            9999874 4899999999999999999  467888755431         22333222111111000             


Q ss_pred             ------------------cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         140 ------------------YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       140 ------------------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                                        .......+.++.+|+.+||..||++|||++|+  |+||++..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          282 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             HHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             hhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence                              00011225688999999999999999999999  88998653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.96  E-value=4.8e-30  Score=204.37  Aligned_cols=151  Identities=16%  Similarity=0.233  Sum_probs=121.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRL   88 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~   88 (188)
                      ++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++.......  ......||+.|+|||++.+
T Consensus       294 ~~~qi~~aL~~LH~~gIvHrDLKP--------~NILl~~~g~vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~  363 (543)
T 3c4z_A          294 YTAQIVSGLEHLHQRNIIYRDLKP--------ENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLG  363 (543)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTSCEEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCcccCCCh--------HHEEEeCCCCEEEeecceeeeccCCCc--ccccccCCccccChhhhcC
Confidence            467899999999999999999999        999999999999999999987654321  2234578999999999998


Q ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC----HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          89 RKFTTKSDVWSFGVTLWEILNLARHRPYEGLT----DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        89 ~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      ..++.++|+||+||++|+|+  +|..||.+..    ..++...+.....       .....++.++.+++.+||..||++
T Consensus       364 ~~~~~~~DiwSlGvilyell--tG~~PF~~~~~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~lL~~dP~~  434 (543)
T 3c4z_A          364 EEYDFSVDYFALGVTLYEMI--AARGPFRARGEKVENKELKQRVLEQAV-------TYPDKFSPASKDFCEALLQKDPEK  434 (543)
T ss_dssp             CCBCTHHHHHHHHHHHHHHH--HSSCSSCCTTCCCCHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             CCCChHHhcCcchHHHHHHH--hCCCCCCCCccchhHHHHHHHHhhccc-------CCCcccCHHHHHHHHHhccCCHhH
Confidence            88999999999999999999  4678997652    3444444443211       112467889999999999999999


Q ss_pred             CCCH-----HHH--HHHHHhc
Q psy4332         165 RPSF-----TEI--HLFLQRK  178 (188)
Q Consensus       165 Rps~-----~el--~~~l~~~  178 (188)
                      ||++     +++  |+||+.+
T Consensus       435 R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          435 RLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             SCCCBTTBSHHHHTSGGGTTC
T ss_pred             CCCCcccCHHHHHcCccccCC
Confidence            9964     677  8888864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=2e-29  Score=188.70  Aligned_cols=156  Identities=18%  Similarity=0.283  Sum_probs=124.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......++..|+|||.+.
T Consensus       129 ~i~~~i~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  198 (314)
T 3com_A          129 TILQSTLKGLEYLHFMRKIHRDIKA--------GNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  198 (314)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECBTTB--SCBCCCCSCGGGCCHHHHS
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCcCH--------HHEEECCCCCEEEeecccchhhhhhc--cccCccCCCCCccChhhcC
Confidence            4567889999999999999999999        99999999999999999987664332  1223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|+++  +|..||.+.........+.....    .........+.++.+++.+||..||++||+
T Consensus       199 ~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt  272 (314)
T 3com_A          199 EIGYNCVADIWSLGITAIEMA--EGKPPYADIHPMRAIFMIPTNPP----PTFRKPELWSDNFTDFVKQCLVKSPEQRAT  272 (314)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSCC----CCCSSGGGSCHHHHHHHHHHTCSCTTTSCC
T ss_pred             CCCCCccccHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHhcCCC----cccCCcccCCHHHHHHHHHHccCChhhCcC
Confidence            888999999999999999999  46789988776555444332211    111112345789999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      +.++  |+||+...
T Consensus       273 ~~~ll~~~~~~~~~  286 (314)
T 3com_A          273 ATQLLQHPFVRSAK  286 (314)
T ss_dssp             HHHHTTSHHHHTCC
T ss_pred             HHHHHhCHHHhcCC
Confidence            9999  78988653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=1.2e-29  Score=188.99  Aligned_cols=153  Identities=22%  Similarity=0.354  Sum_probs=124.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......+++.|+|||.+.
T Consensus       123 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  192 (303)
T 3a7i_A          123 TILREILKGLDYLHSEKKIHRDIKA--------ANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIK  192 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECBTTB--CCBCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCh--------heEEECCCCCEEEeecccceecCccc--cccCccCCCcCccCHHHHh
Confidence            4567889999999999999999999        99999999999999999987664332  1223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++  +|..||...........+.....      .......+..+.+++.+||..||++||+
T Consensus       193 ~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps  264 (303)
T 3a7i_A          193 QSAYDSKADIWSLGITAIELA--RGEPPHSELHPMKVLFLIPKNNP------PTLEGNYSKPLKEFVEACLNKEPSFRPT  264 (303)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSCC------CCCCSSCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             cCCCCchhhhHHHHHHHHHHc--cCCCCCCCcCHHHHHHHhhcCCC------CCCccccCHHHHHHHHHHcCCChhhCcC
Confidence            888899999999999999999  56789988876665554433211      1123456889999999999999999999


Q ss_pred             HHHH--HHHHHhc
Q psy4332         168 FTEI--HLFLQRK  178 (188)
Q Consensus       168 ~~el--~~~l~~~  178 (188)
                      +.++  |+||.+.
T Consensus       265 ~~~ll~~~~~~~~  277 (303)
T 3a7i_A          265 AKELLKHKFILRN  277 (303)
T ss_dssp             HHHHTTCHHHHHH
T ss_pred             HHHHhhChhhhcC
Confidence            9999  7787654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=2.4e-30  Score=190.31  Aligned_cols=157  Identities=20%  Similarity=0.301  Sum_probs=121.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       109 ~~~~~i~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (276)
T 2yex_A          109 RFFHQLMAGVVYLHGIGITHRDIKP--------ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  180 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGT
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCh--------HHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHh
Confidence            4567889999999999999999999        99999999999999999987664433323344566889999999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..+ +.++||||+|+++++++|  |..||...... .....+....     .........+.++.+++.+||..||++|
T Consensus       181 ~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~R  253 (276)
T 2yex_A          181 RREFHAEPVDVWSCGIVLTAMLA--GELPWDQPSDSCQEYSDWKEKK-----TYLNPWKKIDSAPLALLHKILVENPSAR  253 (276)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHH--SSCCCSCSCTTSHHHHHHHTTC-----TTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             cCCCCCCcchHHHHHHHHHHHHh--CCCCCCCCchHHHHHHHhhhcc-----cccCchhhcCHHHHHHHHHHCCCCchhC
Confidence            7664 678999999999999994  67888765432 2222222111     1111224567899999999999999999


Q ss_pred             CCHHHH--HHHHHhcc
Q psy4332         166 PSFTEI--HLFLQRKN  179 (188)
Q Consensus       166 ps~~el--~~~l~~~~  179 (188)
                      ||++|+  |+||++..
T Consensus       254 ps~~~il~~~~~~~~~  269 (276)
T 2yex_A          254 ITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             CCHHHHTTCTTTTCCC
T ss_pred             CCHHHHhcCccccChh
Confidence            999999  77887653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.96  E-value=7.2e-31  Score=197.12  Aligned_cols=166  Identities=24%  Similarity=0.378  Sum_probs=123.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       138 ~i~~~l~~~l~~LH~~~ivH~Dikp--------~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~  209 (318)
T 3lxp_A          138 LFAQQICEGMAYLHAQHYIHRDLAA--------RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL  209 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCch--------heEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHh
Confidence            4567899999999999999999999        9999999999999999998876543322 223445577889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-----------HHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-----------VLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      .+..++.++||||+|+++++++  +|..||.......           ....+.....  ..........++.++.+++.
T Consensus       210 ~~~~~~~~~Di~slG~il~~ll--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~  285 (318)
T 3lxp_A          210 KEYKFYYASDVWSFGVTLYELL--THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE--RGERLPRPDKCPAEVYHLMK  285 (318)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHH--TTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH--TTCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHHH--hCCCcccccchhhhhhhcccccchhHHHHHHHHh--cccCCCCCccccHHHHHHHH
Confidence            9888899999999999999999  5667776532110           0001111000  11112223567889999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhccCCCCCC
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRKNLGYVPP  185 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~~~~~~~~  185 (188)
                      +||+.||++|||+.++++.|+++.+.+.++
T Consensus       286 ~~l~~dP~~Rps~~ell~~L~~l~~~~~~~  315 (318)
T 3lxp_A          286 NCWETEASFRPTFENLIPILKTVHEKYQGQ  315 (318)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred             HHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence            999999999999999999999886654443

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.1e-29  Score=191.62  Aligned_cols=166  Identities=20%  Similarity=0.254  Sum_probs=117.0

Q ss_pred             ccccchhhhhhhhccc--------ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKN--------GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~--------~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~   77 (188)
                      .++.+++.++.|+|++        ||+|+||||        +||+++.++.+||+|||++..........  ......+|
T Consensus       138 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp--------~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  209 (337)
T 3mdy_A          138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKS--------KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGT  209 (337)
T ss_dssp             HHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCG--------GGEEECTTSCEEECCCTTCEECC---------CCSSCSC
T ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCEEecccch--------HHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccC
Confidence            4567889999999998        999999999        99999999999999999987664332211  11245688


Q ss_pred             ccccchhhhhcCCCCCh------hhHHHHHHHHHHHHhCCC--------CCCCCCCC----H-HHHHHHhhcccCCCCCc
Q psy4332          78 IRWMAWESVRLRKFTTK------SDVWSFGVTLWEILNLAR--------HRPYEGLT----D-LEVLENISHLHADDGEF  138 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~------~di~slG~~~~~l~t~~~--------~~p~~~~~----~-~~~~~~~~~~~~~~~~~  138 (188)
                      +.|+|||.+.+......      +||||+|+++|+++|+..        ..||....    . ......+..........
T Consensus       210 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (337)
T 3mdy_A          210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP  289 (337)
T ss_dssp             GGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             cceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccc
Confidence            99999999987655554      999999999999995411        55665431    1 12222221111111111


Q ss_pred             ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      .......++.++.+++.+||+.||++||++.++++.|+++.+.
T Consensus       290 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          290 NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            1111224567899999999999999999999999999987543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=1e-29  Score=189.64  Aligned_cols=155  Identities=18%  Similarity=0.231  Sum_probs=124.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE---cCcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV---GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||++   +.++.+||+|||++.......    .....+++.|+|||
T Consensus       110 ~~~~qi~~~l~~lH~~~i~H~dikp--------~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE  177 (304)
T 2jam_A          110 LVIQQVLSAVKYLHENGIVHRDLKP--------ENLLYLTPEENSKIMITDFGLSKMEQNGI----MSTACGTPGYVAPE  177 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSCCG--------GGCEESSSSTTCCEEBCSCSTTCCCCCBT----THHHHSCCCBCCTT
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCH--------HHEEEecCCCCCCEEEccCCcceecCCCc----cccccCCCCccChH
Confidence            3567889999999999999999999        99999   678899999999986543321    12234678899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+.........+.......   ........+.++.+++.+||..||++
T Consensus       178 ~~~~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~  252 (304)
T 2jam_A          178 VLAQKPYSKAVDCWSIGVITYILL--CGYPPFYEETESKLFEKIKEGYYEF---ESPFWDDISESAKDFICHLLEKDPNE  252 (304)
T ss_dssp             TBSSCSCCHHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHCCCCC---CTTTTTTSCHHHHHHHHHHHCSSTTT
T ss_pred             HhccCCCCchhhHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHcCCCCC---CccccccCCHHHHHHHHHHcCCChhH
Confidence            998888999999999999999999  5678999888777776665432211   11223456889999999999999999


Q ss_pred             CCCHHHH--HHHHHhcc
Q psy4332         165 RPSFTEI--HLFLQRKN  179 (188)
Q Consensus       165 Rps~~el--~~~l~~~~  179 (188)
                      ||+++++  |+||+...
T Consensus       253 Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          253 RYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             SCCHHHHHTSHHHHSSC
T ss_pred             CcCHHHHhcCccccCCC
Confidence            9999999  78998653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=1.2e-29  Score=201.27  Aligned_cols=157  Identities=18%  Similarity=0.237  Sum_probs=127.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc---eEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF---EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+|+||||        +||+++.++   .+||+|||++.......   ......+|+.|+|||
T Consensus       150 ~i~~qi~~~l~~lH~~~ivH~Dlkp--------~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE  218 (504)
T 3q5i_A          150 NIMKQILSGICYLHKHNIVHRDIKP--------ENILLENKNSLLNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPE  218 (504)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEESSTTCCSSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHCCeEeCCCcH--------HHEEEecCCCCccEEEEECCCCEEcCCCC---ccccccCCcCCCCHH
Confidence            4567899999999999999999999        999998775   69999999987765432   223456889999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+. ..++.++||||+|+++|+++  +|..||.+....+....+.........   ......+.++.+++.+||..||++
T Consensus       219 ~~~-~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~  292 (504)
T 3q5i_A          219 VLK-KKYNEKCDVWSCGVIMYILL--CGYPPFGGQNDQDIIKKVEKGKYYFDF---NDWKNISDEAKELIKLMLTYDYNK  292 (504)
T ss_dssp             HHT-TCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCCCCH---HHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             Hhc-cCCCchHHHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCCCCHHHHHHHHHHcCCChhH
Confidence            987 56899999999999999999  568999999888877777654321111   112456789999999999999999


Q ss_pred             CCCHHHH--HHHHHhccCC
Q psy4332         165 RPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~~  181 (188)
                      |||++|+  |+||++....
T Consensus       293 R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          293 RCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             SCCHHHHHTSHHHHHTCCC
T ss_pred             CCCHHHHhcCHhhhhchhc
Confidence            9999999  8999876543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.96  E-value=3.6e-30  Score=205.86  Aligned_cols=151  Identities=20%  Similarity=0.266  Sum_probs=122.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......   ......||+.|+|||++.
T Consensus       290 ~i~~qIl~aL~yLH~~gIvHrDLKP--------eNILld~~g~vKL~DFGla~~~~~~~---~~~~~~GT~~Y~APEvl~  358 (576)
T 2acx_A          290 FYAAEICCGLEDLHRERIVYRDLKP--------ENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVK  358 (576)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTSCEEECCCTTCEECCTTC---CEECCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCEeccCCch--------heEEEeCCCCeEEEecccceecccCc---cccccCCCccccCHHHHc
Confidence            3567889999999999999999999        99999999999999999998765432   223457899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC----HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT----DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      +..++.++||||+|+++|+|+  +|..||.+..    ...+...+....       ......++.++.+++.+||..||+
T Consensus       359 ~~~~~~~~DiwSLGvilyeLl--tG~~PF~~~~~~~~~~~i~~~i~~~~-------~~~p~~~s~~~~dLI~~lL~~dP~  429 (576)
T 2acx_A          359 NERYTFSPDWWALGCLLYEMI--AGQSPFQQRKKKIKREEVERLVKEVP-------EEYSERFSPQARSLCSQLLCKDPA  429 (576)
T ss_dssp             TCEESSHHHHHHHHHHHHHHH--HSSCSSSCSSSCCCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCCCCccchHHHHHHHHHHHH--hCCCCCcccccchhHHHHHHHhhccc-------ccCCccCCHHHHHHHHHhccCCHH
Confidence            888999999999999999999  4678998753    233443333221       111245788999999999999999


Q ss_pred             CCC-----CHHHH--HHHHHhc
Q psy4332         164 ERP-----SFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rp-----s~~el--~~~l~~~  178 (188)
                      +||     +++|+  |+||+.+
T Consensus       430 ~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          430 ERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             GSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HcCCCCCCCHHHHHhChhhccC
Confidence            999     78999  8899865

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=189.01  Aligned_cols=151  Identities=25%  Similarity=0.423  Sum_probs=112.8

Q ss_pred             cccchhhhhhhhcc---cccccccchhhhhccccccceEEcCcce-EEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           9 QASNLAVVPLLRNK---NGVEHSSLKKKCIKIFDFKNCLVGKKFE-IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         9 ~~~~~~~~~~~lh~---~~i~h~~lk~~~i~~~~~~nill~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .+.+++.++.|+|+   +||+|+||||        +||+++.++. +||+|||++......     .....+++.|+|||
T Consensus       107 ~~~qi~~~l~~LH~~~~~~ivH~dlkp--------~NIll~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE  173 (307)
T 2eva_A          107 WCLQCSQGVAYLHSMQPKALIHRDLKP--------PNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPE  173 (307)
T ss_dssp             HHHHHHHHHHHHHTCSSSCCCCCCCSG--------GGEEEETTTTEEEECCCCC-----------------CCTTSSCHH
T ss_pred             HHHHHHHHHHHHHhCCCCCeecCCCCh--------hHEEEeCCCCEEEEcccccccccccc-----cccCCCCCceEChh
Confidence            45678899999999   8999999999        9999988775 799999998765332     12345788999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      .+.+..++.++||||+|+++++++|  |..||....  ............     . .......+..+.+++.+||..||
T Consensus       174 ~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          174 VFEGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGT-----R-PPLIKNLPKPIESLMTRCWSKDP  245 (307)
T ss_dssp             HHTCCCCCTHHHHHHHHHHHHHHHH--TCCTTTTTCSSHHHHHHHHHTTC-----C-CCCBTTCCHHHHHHHHHHTCSSG
T ss_pred             hhCCCCCCcHHHHHHHHHHHHHHHH--CCCCchhhCccHHHHHHHHhcCC-----C-CCcccccCHHHHHHHHHHhcCCh
Confidence            9998889999999999999999995  578887543  222222222111     1 11224567899999999999999


Q ss_pred             CCCCCHHHHHHHHHhccC
Q psy4332         163 TERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el~~~l~~~~~  180 (188)
                      ++|||++++.+.|+++..
T Consensus       246 ~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          246 SQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             GGSCCHHHHHHHHHHHGG
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999998887754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=1.9e-30  Score=193.66  Aligned_cols=162  Identities=22%  Similarity=0.270  Sum_probs=119.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++................+++.|+|||.+.
T Consensus       137 ~i~~~i~~~l~~lH~~~i~H~dlkp--------~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  208 (307)
T 2nru_A          137 KIAQGAANGINFLHENHHIHRDIKS--------ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR  208 (307)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHhcCCeecCCCCH--------HHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc
Confidence            3567889999999999999999999        99999999999999999987665433333334566889999999986


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH----HHHHhhcccCCC----CCcccCCCCCChHHHHHHHHHHhc
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE----VLENISHLHADD----GEFIYLPTPQTTKDILDLMNECWK  159 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~cl~  159 (188)
                      + .++.++||||+|+++|+++|  |..||.+.....    +...+.......    ...........+..+.+++.+||.
T Consensus       209 ~-~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  285 (307)
T 2nru_A          209 G-EITPKSDIYSFGVVLLEIIT--GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLH  285 (307)
T ss_dssp             T-EECTHHHHHHHHHHHHHHHH--CCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTC
T ss_pred             C-CCCccchhHHHHHHHHHHHH--CCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcC
Confidence            4 57889999999999999995  567887643221    222111110000    000111122335779999999999


Q ss_pred             cCCCCCCCHHHHHHHHHhccC
Q psy4332         160 RSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       160 ~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .||++||++.++.+.|+++..
T Consensus       286 ~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          286 EKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             SSTTTSCCHHHHHHHHHHHC-
T ss_pred             CCcccCcCHHHHHHHHHHHhc
Confidence            999999999999999998753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=2.3e-30  Score=195.82  Aligned_cols=144  Identities=18%  Similarity=0.325  Sum_probs=115.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+|+.|+|||.+.
T Consensus       134 ~i~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~  202 (335)
T 3dls_A          134 YIFRQLVSAVGYLRLKDIIHRDIKD--------ENIVIAEDFTIKLIDFGSAAYLERGK---LFYTFCGTIEYCAPEVLM  202 (335)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTSCEEECCCTTCEECCTTC---CBCEECSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCeEEeccCH--------HHEEEcCCCcEEEeecccceECCCCC---ceeccCCCccccChhhhc
Confidence            3677899999999999999999999        99999999999999999987664432   223345788999999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..+ +.++||||+|+++|+++  +|..||.....      ..       ..........+.++.+++.+||+.||++||
T Consensus       203 ~~~~~~~~~DiwslG~il~el~--~g~~pf~~~~~------~~-------~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  267 (335)
T 3dls_A          203 GNPYRGPELEMWSLGVTLYTLV--FEENPFCELEE------TV-------EAAIHPPYLVSKELMSLVSGLLQPVPERRT  267 (335)
T ss_dssp             TCCBCSHHHHHHHHHHHHHHHH--HSSCSCSSGGG------GT-------TTCCCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCCCCCcccchhHHHHHHHHH--hCCCchhhHHH------HH-------hhccCCCcccCHHHHHHHHHHccCChhhCc
Confidence            7776 77899999999999999  56788876321      00       011122244688999999999999999999


Q ss_pred             CHHHH--HHHHHh
Q psy4332         167 SFTEI--HLFLQR  177 (188)
Q Consensus       167 s~~el--~~~l~~  177 (188)
                      +++++  |+||++
T Consensus       268 s~~ell~hp~~~~  280 (335)
T 3dls_A          268 TLEKLVTDPWVTQ  280 (335)
T ss_dssp             CHHHHHHCTTTTC
T ss_pred             CHHHHhcCccccC
Confidence            99999  677764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=9.4e-30  Score=188.22  Aligned_cols=151  Identities=21%  Similarity=0.335  Sum_probs=117.5

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcce-----EEEccCCCCccCCCCccccccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFE-----IKISDFATDSDMFSSDYYRVHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~-----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~   80 (188)
                      .++.+++.++.|+|++|  |+|+||||        +||+++.++.     +||+|||++......     .....+++.|
T Consensus       126 ~~~~~l~~~l~~lH~~~~~ivH~dikp--------~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y  192 (287)
T 4f0f_A          126 RLMLDIALGIEYMQNQNPPIVHRDLRS--------PNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQW  192 (287)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCBCSCCSG--------GGEEESCCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTT
T ss_pred             HHHHHHHHHHHHHHhCCCCeecCCCCc--------ceEEEeccCCCCceeEEeCCCCcccccccc-----ccccCCCccc
Confidence            45678899999999999  99999999        9999987765     999999998754332     2345678899


Q ss_pred             cchhhhh--cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH--HHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          81 MAWESVR--LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE--VLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        81 ~~Pe~~~--~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      +|||.+.  ...++.++||||+|+++|++++  |..||.......  ....+....     .........++++.+++.+
T Consensus       193 ~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~  265 (287)
T 4f0f_A          193 MAPETIGAEEESYTEKADTYSFAMILYTILT--GEGPFDEYSYGKIKFINMIREEG-----LRPTIPEDCPPRLRNVIEL  265 (287)
T ss_dssp             SCGGGSSCSSCEECHHHHHHHHHHHHHHHHH--SSCTTTTCCCCHHHHHHHHHHSC-----CCCCCCTTSCHHHHHHHHH
T ss_pred             cCchhhccCCCCcCchhhHHHHHHHHHHHHc--CCCCCccccccHHHHHHHHhccC-----CCCCCCcccCHHHHHHHHH
Confidence            9999984  3446889999999999999994  678887654322  233332211     1112234568899999999


Q ss_pred             HhccCCCCCCCHHHHHHHHHhc
Q psy4332         157 CWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       157 cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ||+.||++||+++++++.|+++
T Consensus       266 ~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          266 CWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HhcCChhhCcCHHHHHHHHHhC
Confidence            9999999999999999998864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=3.9e-30  Score=194.21  Aligned_cols=163  Identities=16%  Similarity=0.256  Sum_probs=113.5

Q ss_pred             ccccchhhhhhhhccc---------ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc------ccccC
Q psy4332           8 PQASNLAVVPLLRNKN---------GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY------YRVHD   72 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~---------~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~   72 (188)
                      .++.+++.|+.|+|++         ||+|+||||        +||+++.++.+||+|||++........      .....
T Consensus       115 ~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp--------~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~  186 (336)
T 3g2f_A          115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS--------RNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI  186 (336)
T ss_dssp             HHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSG--------GGEEECTTSCEEECCCTTCEECSSSSCC---------C
T ss_pred             HHHHHHHHHHHHHHhhhccccccccceeeccccc--------ceEEEcCCCcEEEeeccceeecccccccCccccccccc
Confidence            4577899999999999         999999999        999999999999999999876643211      11223


Q ss_pred             CCCCCccccchhhhhc-------CCCCChhhHHHHHHHHHHHHhCCCCCCC-CCCC----------------HHHHHHHh
Q psy4332          73 NTSLPIRWMAWESVRL-------RKFTTKSDVWSFGVTLWEILNLARHRPY-EGLT----------------DLEVLENI  128 (188)
Q Consensus        73 ~~~~~~~~~~Pe~~~~-------~~~~~~~di~slG~~~~~l~t~~~~~p~-~~~~----------------~~~~~~~~  128 (188)
                      ...+|+.|+|||.+.+       ..++.++||||+|+++|+++|+  ..|| .+..                ........
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR--CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVL  264 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTT--BGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHH
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhc--CCcCCCccchhHHHHhhhcccCCCchHHHHHhh
Confidence            4568999999999976       3456789999999999999954  3343 2211                01111111


Q ss_pred             hcccCCCCCcc--cCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         129 SHLHADDGEFI--YLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       129 ~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      ...........  .......+.++.+++.+||+.||++|||++|+.+.|+++-.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          265 VSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             HTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            11100000000  00111235679999999999999999999999988887643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=9.7e-31  Score=197.06  Aligned_cols=161  Identities=12%  Similarity=0.169  Sum_probs=118.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++ .+||+|||++.......   ......++..|+|||.+
T Consensus       134 ~~~~qi~~~l~~lH~~~ivH~Dikp--------~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~~~y~aPE~~  202 (330)
T 3nsz_A          134 FYMYEILKALDYCHSMGIMHRDVKP--------HNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL  202 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEETTTTEEEECCCTTCEECCTTC---CCCSCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCH--------HHEEEcCCCCEEEEEeCCCceEcCCCC---ccccccccccccChhhh
Confidence            4567899999999999999999999        999999776 89999999987664432   22345678889999999


Q ss_pred             hc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcc-------------cCCC-------------CC-
Q psy4332          87 RL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHL-------------HADD-------------GE-  137 (188)
Q Consensus        87 ~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~-------------~~~~-------------~~-  137 (188)
                      .+ ..++.++||||+|++++++++  |..||... ...+....+...             ....             .. 
T Consensus       203 ~~~~~~~~~~DiwslG~il~~ll~--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (330)
T 3nsz_A          203 VDYQMYDYSLDMWSLGCMLASMIF--RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW  280 (330)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHH--TCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCG
T ss_pred             cCCCcCCchhhHHHHHHHHHHHHh--CCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccch
Confidence            86 568999999999999999995  56787443 322222211110             0000             00 


Q ss_pred             ---cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         138 ---FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       138 ---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                         .........+.++.+++.+||..||++|||++|+  |+||+++..+
T Consensus       281 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  329 (330)
T 3nsz_A          281 ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD  329 (330)
T ss_dssp             GGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC--
T ss_pred             hhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhccC
Confidence               0001112257899999999999999999999999  8899987543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.96  E-value=2.7e-29  Score=184.00  Aligned_cols=151  Identities=21%  Similarity=0.372  Sum_probs=121.7

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++|  |+|+||||        +||+++.++.++++||++......       ....+|+.|+|||.
T Consensus       115 ~i~~qi~~~l~~lH~~~~~i~H~dikp--------~Nil~~~~~~~~l~~~~~~~~~~~-------~~~~~t~~y~aPE~  179 (271)
T 3kmu_A          115 KFALDMARGMAFLHTLEPLIPRHALNS--------RSVMIDEDMTARISMADVKFSFQS-------PGRMYAPAWVAPEA  179 (271)
T ss_dssp             HHHHHHHHHHHHHTTSSSCCTTCCCSG--------GGEEECTTSCEEEEGGGSCCTTSC-------TTCBSCGGGSCHHH
T ss_pred             HHHHHHHHHHHHHhcCCCceecCCCcc--------ceEEEcCCcceeEEeccceeeecc-------cCccCCccccChhh
Confidence            45678899999999999  99999999        999999999999999887544322       23457889999999


Q ss_pred             hhcCCCCC---hhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          86 VRLRKFTT---KSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        86 ~~~~~~~~---~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      +.+.....   ++||||+|+++|+++|  |..||.+.........+......     .......+.++.+++.+||+.||
T Consensus       180 ~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p  252 (271)
T 3kmu_A          180 LQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKVALEGLR-----PTIPPGISPHVSKLMKICMNEDP  252 (271)
T ss_dssp             HHSCGGGSCHHHHHHHHHHHHHHHHHH--CSCTTTTSCHHHHHHHHHHSCCC-----CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             hccCCCCCCCchhhHHHHHHHHHHHHh--CCCCccccChHHHHHHHHhcCCC-----CCCCCCCCHHHHHHHHHHcCCCh
Confidence            98654443   7999999999999995  67899988876665555432211     11224578899999999999999


Q ss_pred             CCCCCHHHHHHHHHhccC
Q psy4332         163 TERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el~~~l~~~~~  180 (188)
                      ++|||++++.+.|+++.+
T Consensus       253 ~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          253 AKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             GGSCCHHHHHHHHHHHCC
T ss_pred             hhCcCHHHHHHHHHHhhc
Confidence            999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=1.5e-29  Score=189.11  Aligned_cols=160  Identities=19%  Similarity=0.286  Sum_probs=114.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......++..|+|||.+.
T Consensus       140 ~i~~qi~~~l~~LH~~~i~H~dl~p--------~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  209 (310)
T 2wqm_A          140 KYFVQLCSALEHMHSRRVMHRDIKP--------ANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIH  209 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEECCC--------------------CCSSCCHHHHT
T ss_pred             HHHHHHHHHHHHHhhCCeeCCCCcH--------HHEEEcCCCCEEEEeccceeeecCCC--ccccccCCCeeEeChHHhC
Confidence            4567889999999999999999999        99999999999999999987654322  1223445788899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC--HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT--DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..++.++||||+|++++++++  |..||.+..  .......+...     .....+....+.++.+++.+||..||++|
T Consensus       210 ~~~~~~~~Dv~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~R  282 (310)
T 2wqm_A          210 ENGYNFKSDIWSLGCLLYEMAA--LQSPFYGDKMNLYSLCKKIEQC-----DYPPLPSDHYSEELRQLVNMCINPDPEKR  282 (310)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHH--SSCTTC---CCHHHHHHHHHTT-----CSCCCCTTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCCchhhHHHHHHHHHHHHh--CCCCCcccchhHHHHHHHhhcc-----cCCCCcccccCHHHHHHHHHHcCCChhhC
Confidence            8889999999999999999995  567886542  23333333321     11222335578899999999999999999


Q ss_pred             CCHHHHHHHHHhccCCCCC
Q psy4332         166 PSFTEIHLFLQRKNLGYVP  184 (188)
Q Consensus       166 ps~~el~~~l~~~~~~~~~  184 (188)
                      |++.++...|+++.....+
T Consensus       283 ps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          283 PDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             CCHHHHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHHHhhhh
Confidence            9999999999988654433

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.96  E-value=2e-29  Score=188.96  Aligned_cols=158  Identities=22%  Similarity=0.240  Sum_probs=118.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc---ccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY---YRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++ ++.+||+|||++........   ........+++.|+|||
T Consensus       134 ~i~~qi~~al~~lH~~~i~H~dlkp--------~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE  204 (319)
T 2y4i_B          134 QIAQEIVKGMGYLHAKGILHKDLKS--------KNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE  204 (319)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCS--------TTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHH
T ss_pred             HHHHHHHHHHHHHHhCCccccCCCh--------hhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChH
Confidence            4567889999999999999999999        999998 67899999998765432111   11223445788999999


Q ss_pred             hhhc---------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          85 SVRL---------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        85 ~~~~---------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      .+.+         ..++.++||||+|+++|+++  +|..||.+.........+....     .........+.++.+++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~--~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~  277 (319)
T 2y4i_B          205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH--AREWPFKTQPAEAIIWQMGTGM-----KPNLSQIGMGKEISDILL  277 (319)
T ss_dssp             HHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH--HSSCSSSSCCHHHHHHHHHTTC-----CCCCCCSSCCTTHHHHHH
T ss_pred             HhhhccccccccccCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHhccCC-----CCCCCcCCCCHHHHHHHH
Confidence            9874         34688999999999999999  4678999888776665554321     112222356778999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      +||..||++||++.++.+.|+++...
T Consensus       278 ~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          278 FCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999988654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=2.3e-29  Score=205.01  Aligned_cols=155  Identities=32%  Similarity=0.586  Sum_probs=124.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||++........ .......+++.|+|||.+.
T Consensus       495 ~i~~qi~~aL~~LH~~givHrDikp--------~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~  565 (656)
T 2j0j_A          495 LYAYQLSTALAYLESKRFVHRDIAA--------RNVLVSSNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESIN  565 (656)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccccccch--------HhEEEeCCCCEEEEecCCCeecCCCcc-eeccCCCCCcceeCHHHhc
Confidence            3567899999999999999999999        999999999999999999887644322 1223344677899999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++|++++ .|..||.+....+....+.....      ......++.++.+++.+||..||++||+
T Consensus       566 ~~~~~~~~DiwSlG~il~ellt-~g~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~RPs  638 (656)
T 2j0j_A          566 FRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNNDVIGRIENGER------LPMPPNCPPTLYSLMTKCWAYDPSRRPR  638 (656)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhhHHHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHcCCC------CCCCccccHHHHHHHHHHcCCChhHCcC
Confidence            8889999999999999999995 36789999887777766654321      1123467889999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      +.++...|+++
T Consensus       639 ~~el~~~L~~i  649 (656)
T 2j0j_A          639 FTELKAQLSTI  649 (656)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999888876

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=1.4e-29  Score=186.24  Aligned_cols=152  Identities=18%  Similarity=0.278  Sum_probs=116.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+.
T Consensus       115 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  183 (276)
T 2h6d_A          115 RLFQQILSAVDYCHRHMVVHRDLKP--------ENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVIS  183 (276)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCCCCG--------GGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGT
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCh--------hhEEECCCCCEEEeecccccccCCCc---ceecccCCccccCHHHHc
Confidence            4567889999999999999999999        99999999999999999987664432   223445788899999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +... +.++||||+|++++++++  |..||.+.........+.....       ......+.++.+++.+||..||++||
T Consensus       184 ~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rp  254 (276)
T 2h6d_A          184 GRLYAGPEVDIWSCGVILYALLC--GTLPFDDEHVPTLFKKIRGGVF-------YIPEYLNRSVATLLMHMLQVDPLKRA  254 (276)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCCCCccchHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHhhcCcc-------cCchhcCHHHHHHHHHHccCChhhCC
Confidence            7655 579999999999999994  6789988876666665543211       11244678999999999999999999


Q ss_pred             CHHHH--HHHHHhcc
Q psy4332         167 SFTEI--HLFLQRKN  179 (188)
Q Consensus       167 s~~el--~~~l~~~~  179 (188)
                      ++.++  |+||++.-
T Consensus       255 s~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          255 TIKDIREHEWFKQDL  269 (276)
T ss_dssp             CHHHHHHSHHHHTTC
T ss_pred             CHHHHHhChhhccCc
Confidence            99999  78998653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=1.1e-29  Score=193.66  Aligned_cols=159  Identities=21%  Similarity=0.339  Sum_probs=119.9

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++ ||+|+||||        +||+++.++.+||+|||++......    ......+++.|+|||.+
T Consensus       135 ~i~~~i~~~l~~lh~~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~  202 (360)
T 3eqc_A          135 KVSIAVIKGLTYLREKHKIMHRDVKP--------SNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL  202 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCSCCSG--------GGEEECTTCCEEECCCCCCHHHHHH----C----CCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCEEcCCccH--------HHEEECCCCCEEEEECCCCcccccc----cccCCCCCCCeECHHHH
Confidence            4567888999999986 999999999        9999999999999999998654321    22345678899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC--------------------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD--------------------------------  134 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~--------------------------------  134 (188)
                      .+..++.++||||+|+++|+++  +|..||......+....+......                                
T Consensus       203 ~~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (360)
T 3eqc_A          203 QGTHYSVQSDIWSMGLSLVEMA--VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL  280 (360)
T ss_dssp             TTCCCSHHHHHHHHHHHHHHHH--HTSCCSSCCCHHHHHHHHC------------------------------CCCHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhh
Confidence            9888999999999999999999  567898876654432221100000                                


Q ss_pred             -----CCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         135 -----DGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       135 -----~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                           .......+....+.++.+++.+||..||++|||++|+  |+||++...
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  333 (360)
T 3eqc_A          281 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  333 (360)
T ss_dssp             HHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             hhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence                 0011122234467899999999999999999999999  899987643

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=7.2e-30  Score=199.22  Aligned_cols=158  Identities=23%  Similarity=0.269  Sum_probs=112.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-------------ceEEEccCCCCccCCCCcccc--ccC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-------------FEIKISDFATDSDMFSSDYYR--VHD   72 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-------------~~~kl~dfg~~~~~~~~~~~~--~~~   72 (188)
                      .++.+++.|+.|||++||+|+||||        +||+++.+             +.+||+|||+++.........  ...
T Consensus       119 ~i~~qi~~aL~~LH~~~ivHrDLkp--------~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~  190 (434)
T 2rio_A          119 SLLRQIASGVAHLHSLKIIHRDLKP--------QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN  190 (434)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC----------
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCh--------HhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeec
Confidence            3678999999999999999999999        99999754             389999999988765432111  123


Q ss_pred             CCCCCccccchhhhhc-------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCC
Q psy4332          73 NTSLPIRWMAWESVRL-------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ  145 (188)
Q Consensus        73 ~~~~~~~~~~Pe~~~~-------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (188)
                      ...||+.|+|||++.+       ..++.++||||+||++|+++| .|..||.+......  .+.................
T Consensus       191 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-~g~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~~~~  267 (434)
T 2rio_A          191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS-KGKHPFGDKYSRES--NIIRGIFSLDEMKCLHDRS  267 (434)
T ss_dssp             ----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHT-TSCCTTCSTTTHHH--HHHHTCCCCCCCTTCCCHH
T ss_pred             CCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHh-CCCCCCCCchhhHH--HHhcCCCCccccccccccc
Confidence            4568899999999975       568899999999999999995 26789977643331  2222111111111111223


Q ss_pred             ChHHHHHHHHHHhccCCCCCCCHHHH--HHHHH
Q psy4332         146 TTKDILDLMNECWKRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       146 ~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~  176 (188)
                      .+.++.+++.+||+.||++||++.++  |+||.
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            46789999999999999999999999  66664

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=4.8e-30  Score=192.21  Aligned_cols=159  Identities=21%  Similarity=0.261  Sum_probs=112.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccCCCCcc-----ccccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSDY-----YRVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~   79 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.   +||+|||++........     ........+++.
T Consensus       115 ~i~~qi~~~l~~lH~~~ivH~dlkp--------~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~  186 (316)
T 2ac3_A          115 VVVQDVASALDFLHNKGIAHRDLKP--------ENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE  186 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEESCSSSSCSEEECCTTCCC-------------------CCSGG
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCH--------HHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcC
Confidence            4567899999999999999999999        9999988765   99999999876542221     111223458899


Q ss_pred             ccchhhhhc-----CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH---------------HHHHHHhhcccCCCCCcc
Q psy4332          80 WMAWESVRL-----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD---------------LEVLENISHLHADDGEFI  139 (188)
Q Consensus        80 ~~~Pe~~~~-----~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~---------------~~~~~~~~~~~~~~~~~~  139 (188)
                      |+|||.+.+     ..++.++||||+|+++|+++|  |..||.+...               ......+........   
T Consensus       187 y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---  261 (316)
T 2ac3_A          187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS--GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP---  261 (316)
T ss_dssp             GCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHH--SSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC---
T ss_pred             ccChHHhhcccccccCCCcccccHhHHHHHHHHHH--CCCCCcccccccccccccccchhHHHHHHHHHhccCcccC---
Confidence            999999875     457889999999999999995  6788876531               223333332211111   


Q ss_pred             cCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         140 YLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      .......+.++.+++.+||..||++|||+.|+  |+||+...
T Consensus       262 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            00113467899999999999999999999999  77888754

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=3.3e-29  Score=187.52  Aligned_cols=156  Identities=26%  Similarity=0.390  Sum_probs=112.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++. +.+||+|||++................+++.|+|||.+.
T Consensus       131 ~i~~qi~~aL~~LH~~~ivH~dlkp--------~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  201 (313)
T 3cek_A          131 SYWKNMLEAVHTIHQHGIVHSDLKP--------ANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK  201 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCc--------ccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHh
Confidence            4567899999999999999999999        9999965 789999999988765433222334456889999999987


Q ss_pred             c-----------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          88 L-----------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        88 ~-----------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      +           ..++.++||||+|+++++++  +|..||..... ......+....     .........+.++.+++.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~Di~slG~il~el~--~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~  274 (313)
T 3cek_A          202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMT--YGKTPFQQIINQISKLHAIIDPN-----HEIEFPDIPEKDLQDVLK  274 (313)
T ss_dssp             TCC----------CCCHHHHHHHHHHHHHHHH--HSSCTTTTCCSHHHHHHHHHCTT-----SCCCCCCCSCHHHHHHHH
T ss_pred             hcccccccccccccCCchHHHHHHHHHHHHHH--hCCCchhhHHHHHHHHHHHHhcc-----cccCCcccchHHHHHHHH
Confidence            5           36788999999999999999  45788877543 23333332211     111112344778999999


Q ss_pred             HHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         156 ECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      +||..||++||++.|+  |+||+...
T Consensus       275 ~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          275 CCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             HHccCCcccCcCHHHHhcCccccCCC
Confidence            9999999999999999  78888543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=3.2e-30  Score=198.46  Aligned_cols=154  Identities=15%  Similarity=0.189  Sum_probs=114.3

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcc-------------------------------------
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKF-------------------------------------   49 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~-------------------------------------   49 (188)
                      .++.+|+.|+.|+|++ ||+||||||        +||+++.++                                     
T Consensus       150 ~i~~qi~~aL~~lH~~~givHrDikp--------~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (397)
T 1wak_A          150 KIIQQVLQGLDYLHTKCRIIHTDIKP--------ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL  221 (397)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECCCCSG--------GGEEECCCHHHHHHHHHHHC---------------------CCTTS
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCH--------HHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccc
Confidence            4677899999999998 999999999        999998775                                     


Q ss_pred             ------------eEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Q psy4332          50 ------------EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYE  117 (188)
Q Consensus        50 ------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~  117 (188)
                                  .+||+|||++......     .....+|+.|+|||++.+..++.++||||+||++|+|+|  |..||.
T Consensus       222 ~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g~~pf~  294 (397)
T 1wak_A          222 VNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELAT--GDYLFE  294 (397)
T ss_dssp             CCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH--SSCSCC
T ss_pred             ccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhh--CCCCCC
Confidence                        7999999998766432     234567899999999998889999999999999999994  678887


Q ss_pred             CCC------HHHHHHHhhcccCCCC------------------Cccc-----------------CCCCCChHHHHHHHHH
Q psy4332         118 GLT------DLEVLENISHLHADDG------------------EFIY-----------------LPTPQTTKDILDLMNE  156 (188)
Q Consensus       118 ~~~------~~~~~~~~~~~~~~~~------------------~~~~-----------------~~~~~~~~~~~~li~~  156 (188)
                      +..      .......+........                  ....                 ......+.++.+|+.+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  374 (397)
T 1wak_A          295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP  374 (397)
T ss_dssp             CCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGG
T ss_pred             CCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHH
Confidence            543      1222222211110000                  0000                 0011224678899999


Q ss_pred             HhccCCCCCCCHHHH--HHHHH
Q psy4332         157 CWKRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       157 cl~~dp~~Rps~~el--~~~l~  176 (188)
                      ||+.||++|||+.|+  |+||+
T Consensus       375 ~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          375 MLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             GGCSSGGGSCCHHHHHTSGGGG
T ss_pred             HhccChhhcCCHHHHhhCcccc
Confidence            999999999999999  77875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.96  E-value=8.6e-30  Score=192.66  Aligned_cols=166  Identities=20%  Similarity=0.203  Sum_probs=120.3

Q ss_pred             ccccchhhhhhhhc--------ccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCC
Q psy4332           8 PQASNLAVVPLLRN--------KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh--------~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~   77 (188)
                      .++.+++.++.|+|        ++||+|+||||        +||+++.++.+||+|||++..........  ......++
T Consensus       143 ~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp--------~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt  214 (342)
T 1b6c_B          143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS--------KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT  214 (342)
T ss_dssp             HHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSG--------GGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCH--------HHEEECCCCCEEEEECCCceeccccccccccccccCCcC
Confidence            45678899999999        99999999999        99999999999999999987654332211  22445688


Q ss_pred             ccccchhhhhcCC------CCChhhHHHHHHHHHHHHhCCC--------CCCCCCCC-----HHHHHHHhhcccCCCCCc
Q psy4332          78 IRWMAWESVRLRK------FTTKSDVWSFGVTLWEILNLAR--------HRPYEGLT-----DLEVLENISHLHADDGEF  138 (188)
Q Consensus        78 ~~~~~Pe~~~~~~------~~~~~di~slG~~~~~l~t~~~--------~~p~~~~~-----~~~~~~~~~~~~~~~~~~  138 (188)
                      +.|+|||.+.+..      ++.++||||+|+++|+++|+..        ..||....     .......+..........
T Consensus       215 ~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (342)
T 1b6c_B          215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP  294 (342)
T ss_dssp             GGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             cccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCc
Confidence            9999999997552      2268999999999999996522        57876542     223333332211111111


Q ss_pred             ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccCC
Q psy4332         139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~~  181 (188)
                      ........+..+.+++.+||..||++||++.++++.|+++.+.
T Consensus       295 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          295 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            1111123456899999999999999999999999999988554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=3.6e-29  Score=187.45  Aligned_cols=155  Identities=23%  Similarity=0.437  Sum_probs=112.7

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++ ||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+
T Consensus       128 ~~~~~i~~~l~~lH~~~~i~H~dlkp--------~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~  196 (318)
T 2dyl_A          128 KMTVAIVKALYYLKEKHGVIHRDVKP--------SNILLDERGQIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERI  196 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCCCCCG--------GGEEECTTSCEEECCCTTC-----------------CCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCEEeCCCCH--------HHEEECCCCCEEEEECCCchhccCCc---cccccCCCccccChhhc
Confidence            4567889999999995 999999999        99999999999999999987654332   22344578889999999


Q ss_pred             h-----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          87 R-----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        87 ~-----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .     ...++.++||||+|+++++++|  |..||... ...+....+.....    .........+.++.+++.+||..
T Consensus       197 ~~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~  270 (318)
T 2dyl_A          197 DPPDPTKPDYDIRADVWSLGISLVELAT--GQFPYKNCKTDFEVLTKVLQEEP----PLLPGHMGFSGDFQSFVKDCLTK  270 (318)
T ss_dssp             C--------CCTHHHHHHHHHHHHHHHH--SSCTTTTCCSHHHHHHHHHHSCC----CCCCSSSCCCHHHHHHHHHHTCS
T ss_pred             ccccccccCCccccchhhHHHHHHHHHh--CCCCCCCCCccHHHHHHHhccCC----CCCCccCCCCHHHHHHHHHHccC
Confidence            4     4567889999999999999995  57898874 34444444433211    11112235688999999999999


Q ss_pred             CCCCCCCHHHH--HHHHHhcc
Q psy4332         161 SPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~~~  179 (188)
                      ||++||+++++  |+||++..
T Consensus       271 dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          271 DHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             CTTTSCCHHHHTTSHHHHHHH
T ss_pred             ChhHCcCHHHHhhCHHHHhcc
Confidence            99999999999  78887654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=2.7e-30  Score=190.35  Aligned_cols=155  Identities=21%  Similarity=0.328  Sum_probs=98.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........  ......+++.|+|||.+.
T Consensus       116 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  185 (278)
T 3cok_A          116 HFMHQIITGMLYLHSHGILHRDLTL--------SNLLLTRNMNIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIAT  185 (278)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSSCCG--------GGEEECTTCCEEECCCTTCEECC------------------------
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCH--------HHEEEcCCCCEEEEeecceeeccCCCC--cceeccCCCCcCCcchhc
Confidence            4567899999999999999999999        999999999999999999876643221  223345788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|++++++++  |..||...........+...       ........+.++.+++.+||..||++||+
T Consensus       186 ~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rps  256 (278)
T 3cok_A          186 RSAHGLESDVWSLGCMFYTLLI--GRPPFDTDTVKNTLNKVVLA-------DYEMPSFLSIEAKDLIHQLLRRNPADRLS  256 (278)
T ss_dssp             ------CTHHHHHHHHHHHHHH--SSCSSCCCSCC-----CCSS-------CCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCCchhhHHHHHHHHHHHHh--CCCCCCChhHHHHHHHHhhc-------ccCCccccCHHHHHHHHHHcccCHhhCCC
Confidence            8888999999999999999994  67888776543333332211       11122456789999999999999999999


Q ss_pred             HHHH--HHHHHhccCC
Q psy4332         168 FTEI--HLFLQRKNLG  181 (188)
Q Consensus       168 ~~el--~~~l~~~~~~  181 (188)
                      ++++  |+||++....
T Consensus       257 ~~~~l~h~~~~~~~~~  272 (278)
T 3cok_A          257 LSSVLDHPFMSRNSST  272 (278)
T ss_dssp             HHHHTTSTTTC-----
T ss_pred             HHHHhcCccccCCCCc
Confidence            9999  7788765543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.96  E-value=7.1e-30  Score=188.98  Aligned_cols=154  Identities=26%  Similarity=0.383  Sum_probs=117.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce--------EEEccCCCCccCCCCccccccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE--------IKISDFATDSDMFSSDYYRVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~   79 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.        +||+|||++.......      ...+++.
T Consensus       117 ~i~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~  182 (289)
T 4fvq_A          117 EVAKQLAAAMHFLEENTLIHGNVCA--------KNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------ILQERIP  182 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH------HHHHTTT
T ss_pred             HHHHHHHHHHHHHhhCCeECCCcCc--------ceEEEecCCcccccccceeeeccCcccccccCcc------ccCCcCc
Confidence            4577899999999999999999999        9999988776        9999999986654322      1235667


Q ss_pred             ccchhhhhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          80 WMAWESVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        80 ~~~Pe~~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      |+|||.+.+ ..++.++||||+|+++|+++|+ +..||................        ......+.++.+++.+||
T Consensus       183 y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l  253 (289)
T 4fvq_A          183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG-GDKPLSALDSQRKLQFYEDRH--------QLPAPKAAELANLINNCM  253 (289)
T ss_dssp             TSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHHTTC--------CCCCCSSCTTHHHHHHHS
T ss_pred             ccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC-CCCCccccchHHHHHHhhccC--------CCCCCCCHHHHHHHHHHc
Confidence            999999987 6689999999999999999963 466776666544443332111        111234568999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHhccCCCCC
Q psy4332         159 KRSPTERPSFTEIHLFLQRKNLGYVP  184 (188)
Q Consensus       159 ~~dp~~Rps~~el~~~l~~~~~~~~~  184 (188)
                      +.||++|||++++.+.|+++-...-+
T Consensus       254 ~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          254 DYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             CSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             CCChhHCcCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999988664433

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=2e-29  Score=187.29  Aligned_cols=157  Identities=20%  Similarity=0.242  Sum_probs=124.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+.
T Consensus       128 ~~~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  196 (298)
T 1phk_A          128 KIMRALLEVICALHKLNIVHRDLKP--------ENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIE  196 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCc--------ceEEEcCCCcEEEecccchhhcCCCc---ccccccCCccccCHHHhc
Confidence            4567889999999999999999999        99999999999999999987664332   223456788999999985


Q ss_pred             ------cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          88 ------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        88 ------~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                            ...++.++||||+|++++++++  |..||.+.........+.......   ........+.++.+++.+||..|
T Consensus       197 ~~~~~~~~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~d  271 (298)
T 1phk_A          197 CSMNDNHPGYGKEVDMWSTGVIMYTLLA--GSPPFWHRKQMLMLRMIMSGNYQF---GSPEWDDYSDTVKDLVSRFLVVQ  271 (298)
T ss_dssp             HHHCTTSCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCCCC---CTTTGGGSCHHHHHHHHHHCCSS
T ss_pred             cccccccccCCcccccHhHHHHHHHHHH--CCCCCcCccHHHHHHHHhcCCccc---CcccccccCHHHHHHHHHHccCC
Confidence                  3457889999999999999994  678998887766666655432211   11112356789999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhccC
Q psy4332         162 PTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~~  180 (188)
                      |++||++.++  |+||++...
T Consensus       272 p~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          272 PQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             GGGSCCHHHHTTSGGGCTTC-
T ss_pred             cccCCCHHHHHhChHhhhccc
Confidence            9999999999  788886643

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=1.4e-29  Score=190.77  Aligned_cols=157  Identities=27%  Similarity=0.385  Sum_probs=120.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       131 ~i~~qi~~al~~lH~~~ivH~Dikp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  202 (327)
T 3lxl_A          131 LYSSQICKGMEYLGSRRCVHRDLAA--------RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL  202 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCh--------hhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHh
Confidence            4567899999999999999999999        9999999999999999998876543322 223445578889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH---------------HHHHhhcccCCCCCcccCCCCCChHHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE---------------VLENISHLHADDGEFIYLPTPQTTKDIL  151 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (188)
                      .+..++.++||||+|+++++++  +|..||.......               ....+..      .........+++++.
T Consensus       203 ~~~~~~~~~Di~slG~il~~ll--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~  274 (327)
T 3lxl_A          203 SDNIFSRQSDVWSFGVVLYELF--TYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE------GQRLPAPPACPAEVH  274 (327)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHH--TTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT------TCCCCCCTTCCHHHH
T ss_pred             ccCCCChHHhHHHHHHHHHHHH--hCCCCCccccchhhhhcccccccccHHHHHHHhhc------ccCCCCCCcccHHHH
Confidence            9888899999999999999999  5567765432211               1111111      111122356788999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         152 DLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       152 ~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      +++.+||+.||++|||+.++.+.|+++..
T Consensus       275 ~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          275 ELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999998754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=2.3e-29  Score=186.49  Aligned_cols=151  Identities=17%  Similarity=0.247  Sum_probs=116.1

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++|  |+|+||||        +||+++ .++.+||+|||++.......    .....+++.|+|||
T Consensus       133 ~~~~qi~~~l~~lH~~~~~i~H~dikp--------~Nil~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE  200 (290)
T 1t4h_A          133 SWCRQILKGLQFLHTRTPPIIHRDLKC--------DNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPE  200 (290)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCSCCCG--------GGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEECCCCH--------HHEEEECCCCCEEEeeCCCcccccccc----cccccCCcCcCCHH
Confidence            35678999999999999  99999999        999997 78899999999986543321    22345788899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+. ..++.++||||+|++++++++  |..||.+... ......+....     .........+.++.+++.+||+.||+
T Consensus       201 ~~~-~~~~~~~Di~slG~~l~~l~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~  272 (290)
T 1t4h_A          201 MYE-EKYDESVDVYAFGMCMLEMAT--SEYPYSECQNAAQIYRRVTSGV-----KPASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             GGG-TCCCTHHHHHHHHHHHHHHHH--SSCTTTTCSSHHHHHHHHTTTC-----CCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             HHh-ccCCCcchHHHHHHHHHHHHh--CCCCCCCcCcHHHHHHHHhccC-----CccccCCCCCHHHHHHHHHHccCChh
Confidence            886 568999999999999999994  6789987544 33333333211     11112234567899999999999999


Q ss_pred             CCCCHHHH--HHHHHhc
Q psy4332         164 ERPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~  178 (188)
                      +|||++++  |+||++.
T Consensus       273 ~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          273 ERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             GSCCHHHHHTSGGGC--
T ss_pred             hCCCHHHHhhCcccccC
Confidence            99999999  7788753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=191.23  Aligned_cols=153  Identities=19%  Similarity=0.254  Sum_probs=102.1

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc----------ccCCCC
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR----------VHDNTS   75 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~   75 (188)
                      .++.+++.++.|+|++|  |+|+||||        +||+++.++.+||+|||++..........          ......
T Consensus       140 ~i~~qi~~~l~~LH~~~~~ivH~Dikp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (337)
T 3ll6_A          140 KIFYQTCRAVQHMHRQKPPIIHRDLKV--------ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN  211 (337)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCBCCCCCG--------GGCEECTTSCEEBCCCTTCBCCSSCC-------------------
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEccCCc--------ccEEECCCCCEEEecCccceeccccCcccccccccccchhhcccc
Confidence            45678899999999999  99999999        99999999999999999987765432211          111345


Q ss_pred             CCccccchhhh---hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHH
Q psy4332          76 LPIRWMAWESV---RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILD  152 (188)
Q Consensus        76 ~~~~~~~Pe~~---~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (188)
                      +++.|+|||.+   .+..++.++||||+|+++|+++  +|..||.+..........         .........+..+.+
T Consensus       212 ~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~--~g~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~  280 (337)
T 3ll6_A          212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC--FRQHPFEDGAKLRIVNGK---------YSIPPHDTQYTVFHS  280 (337)
T ss_dssp             ------------CCTTSCSSHHHHHHHHHHHHHHHH--HSSCCC---------------------CCCCTTCCSSGGGHH
T ss_pred             CCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHH--hCCCCCcchhHHHhhcCc---------ccCCcccccchHHHH
Confidence            78889999998   4566788999999999999999  567888765433322211         112223445678999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhcc
Q psy4332         153 LMNECWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       153 li~~cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                      ++.+||+.||++||++.|+++.|+++.
T Consensus       281 li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          281 LIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999988888764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=7.4e-30  Score=189.99  Aligned_cols=157  Identities=22%  Similarity=0.336  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......  .......++..|+|||.+.
T Consensus       121 ~~~~~i~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~  190 (302)
T 2j7t_A          121 VVCRQMLEALNFLHSKRIIHRDLKA--------GNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVM  190 (302)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSG--------GGEEECTTSCEEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcccCCCCH--------HHEEECCCCCEEEEECCCCccccccc--cccccccCChhhcCCeeec
Confidence            4567889999999999999999999        99999999999999999865432111  1223456788999999984


Q ss_pred             -----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          88 -----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        88 -----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                           +..++.++||||+|+++++++  +|..||...........+.....    .........+.++.+++.+||..||
T Consensus       191 ~~~~~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp  264 (302)
T 2j7t_A          191 CETMKDTPYDYKADIWSLGITLIEMA--QIEPPHHELNPMRVLLKIAKSDP----PTLLTPSKWSVEFRDFLKIALDKNP  264 (302)
T ss_dssp             HHHTTSTTTTTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSCC----CCCSSGGGSCHHHHHHHHHHSCSCT
T ss_pred             cccCCCCCCchhhhHHHHHHHHHHHh--cCCCCCccCCHHHHHHHHhccCC----cccCCccccCHHHHHHHHHHcccCh
Confidence                 456788999999999999999  56789988876666555443221    1111224567899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccC
Q psy4332         163 TERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~  180 (188)
                      ++|||+.++  |+||++...
T Consensus       265 ~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          265 ETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             TTSCCHHHHTTSTTTTTCCC
T ss_pred             hhCCCHHHHhcChHHhhhcc
Confidence            999999999  788887643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.96  E-value=2e-29  Score=189.60  Aligned_cols=160  Identities=23%  Similarity=0.304  Sum_probs=117.8

Q ss_pred             ccccchhhhhhhhccc---ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKN---GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~---~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++   ||+|+||||        +||+++.++.+||+|||++........ .......+|+.|+|||
T Consensus       135 ~i~~~i~~~l~~lH~~~~~~ivH~Dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE  205 (326)
T 3uim_A          135 RIALGSARGLAYLHDHCDPKIIHRDVKA--------ANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPE  205 (326)
T ss_dssp             HHHHHHHHHHHHHHHSSSSCEECCCCSG--------GGEEECTTCCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEeCCCch--------hhEEECCCCCEEeccCccccccCcccc-cccccccCCcCccCHH
Confidence            4567888999999999   999999999        999999999999999999876643322 2234455899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC-----CHHHHHHHhhcccCCCCCccc--------CCCCCChHHHH
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL-----TDLEVLENISHLHADDGEFIY--------LPTPQTTKDIL  151 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  151 (188)
                      .+.+..++.++||||+|+++|+++|  |..||...     ........+.... .......        ......+.++.
T Consensus       206 ~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~  282 (326)
T 3uim_A          206 YLSTGKSSEKTDVFGYGVMLLELIT--GQRAFDLARLANDDDVMLLDWVKGLL-KEKKLEALVDVDLQGNYKDEEVEQLI  282 (326)
T ss_dssp             HHHHSEECHHHHHHHHHHHHHHHHH--CCCSBCHHHHTTTSCSBHHHHHTTTT-SSCCSTTSSCTTCTTSCCHHHHHHHH
T ss_pred             HhccCCCCccccchhHHHHHHHHHh--CCCcccccccccccchhHHHHHHHHh-hchhhhhhcChhhccccCHHHHHHHH
Confidence            9988889999999999999999995  56787521     1111111111110 0110000        01112246799


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhcc
Q psy4332         152 DLMNECWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       152 ~li~~cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                      +++.+||+.||++|||+.++++.|+...
T Consensus       283 ~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          283 QVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             HHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            9999999999999999999999998653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=8.3e-30  Score=189.62  Aligned_cols=163  Identities=24%  Similarity=0.345  Sum_probs=116.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc---cccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY---RVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.........   .......+++.|+|||
T Consensus       125 ~i~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (303)
T 2vwi_A          125 TILREVLEGLEYLHKNGQIHRDVKA--------GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE  196 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSG--------GGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCh--------hhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHH
Confidence            3567889999999999999999999        9999999999999999987665433211   1123445788899999


Q ss_pred             hhhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCC---cccCCCCCChHHHHHHHHHHhcc
Q psy4332          85 SVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE---FIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        85 ~~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .+.+ ..++.++||||+|+++|+++|  |..||.+...................   .........+.++.+++.+||..
T Consensus       197 ~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  274 (303)
T 2vwi_A          197 VMEQVRGYDFKADIWSFGITAIELAT--GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQK  274 (303)
T ss_dssp             HHHHHHCCCTHHHHHHHHHHHHHHHH--SSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCS
T ss_pred             HhccccCCCchhhHHHHHHHHHHHHh--CCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccC
Confidence            9875 468999999999999999994  67899877654444333221111100   11112345678999999999999


Q ss_pred             CCCCCCCHHHH--HHHHHhccC
Q psy4332         161 SPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ||++||++.++  |+||++...
T Consensus       275 dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          275 DPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             SGGGSCCHHHHHTSTTC-----
T ss_pred             ChhhCcCHHHHhhChhhhcCCC
Confidence            99999999999  678887654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=2.4e-29  Score=189.36  Aligned_cols=157  Identities=21%  Similarity=0.369  Sum_probs=100.9

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++ ||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+
T Consensus       129 ~i~~~i~~~l~~lH~~~~ivH~dlkp--------~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~  197 (327)
T 3aln_A          129 KITLATVKALNHLKENLKIIHRDIKP--------SNILLDRSGNIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERI  197 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCSCCCG--------GGEEEETTTEEEECCCSSSCC-------------------------
T ss_pred             HHHHHHHHHHHHHhccCCEeECCCCH--------HHEEEcCCCCEEEccCCCceeccccc---ccccCCCCccccCceee
Confidence            4567889999999999 999999999        99999999999999999987664332   22334578889999998


Q ss_pred             ----hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 ----RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ----~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                          .+..++.++||||+|++++++++  |..||.+.... +....+...  .............+.++.+++.+||..|
T Consensus       198 ~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~d  273 (327)
T 3aln_A          198 DPSASRQGYDVRSDVWSLGITLYELAT--GRFPYPKWNSVFDQLTQVVKG--DPPQLSNSEEREFSPSFINFVNLCLTKD  273 (327)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHH--SCCCSSCC-------CCCCCS--CCCCCCCCSSCCCCHHHHHHHHHHTCSS
T ss_pred             ccccCcCCCCchhhHHHHHHHHHHHHH--CCCCCCCcchHHHHHHHHhcC--CCCCCCCcccccCCHHHHHHHHHHhhCC
Confidence                45568899999999999999995  67888775422 111111110  0111111122457889999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhcc
Q psy4332         162 PTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~~  179 (188)
                      |++||++.++  |+||.+..
T Consensus       274 p~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          274 ESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             GGGSCCHHHHTTSHHHHHHH
T ss_pred             hhhCcCHHHHHhChHHHHhH
Confidence            9999999999  78887654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.4e-30  Score=195.66  Aligned_cols=153  Identities=21%  Similarity=0.280  Sum_probs=117.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||+++....... .......+|+.|+|||.+.
T Consensus       163 ~~~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          163 IYVGEIVLALEHLHKLGIIYRDIKL--------ENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVR  233 (355)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEESCSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCH--------HHEEECCCCcEEEeeCCCCeecccCCC-CcccCcccCcCccChhhhc
Confidence            3466899999999999999999999        999999999999999999876543322 1223445888999999998


Q ss_pred             cC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCC----HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          88 LR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLT----DLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        88 ~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +.  .++.++||||||+++|+++|  |..||....    .......+....       .......+..+.+++.+||..|
T Consensus       234 ~~~~~~~~~~DvwslG~il~ell~--g~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~d  304 (355)
T 1vzo_A          234 GGDSGHDKAVDWWSLGVLMYELLT--GASPFTVDGEKNSQAEISRRILKSE-------PPYPQEMSALAKDLIQRLLMKD  304 (355)
T ss_dssp             TCC---CTHHHHHHHHHHHHHHHH--SSCTTSCTTSCCCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHH--CCCCCccCCccchHHHHHHHHhccC-------CCCCcccCHHHHHHHHHHhhhC
Confidence            53  46889999999999999995  567886432    233333332211       1122456789999999999999


Q ss_pred             CCCCC-----CHHHH--HHHHHhc
Q psy4332         162 PTERP-----SFTEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rp-----s~~el--~~~l~~~  178 (188)
                      |++||     +++|+  |+||+++
T Consensus       305 P~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          305 PKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             GGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHhcCCCCCCHHHHHcCcchhcC
Confidence            99999     99999  7788765

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=2e-29  Score=192.78  Aligned_cols=157  Identities=17%  Similarity=0.242  Sum_probs=114.1

Q ss_pred             ccccchhhhhhhhccc-ccccccchhhhhccccccceEEc------CcceEEEccCCCCccCCCCccccccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKN-GVEHSSLKKKCIKIFDFKNCLVG------KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~-~i~h~~lk~~~i~~~~~~nill~------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~   80 (188)
                      .++.+|+.|+.|+|++ ||+|+||||        +||+++      ..+.+||+|||++......     .....+|+.|
T Consensus       135 ~i~~qi~~aL~~lH~~~~ivH~Dikp--------~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y  201 (373)
T 1q8y_A          135 QISKQLLLGLDYMHRRCGIIHTDIKP--------ENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREY  201 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECSCCSG--------GGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGG
T ss_pred             HHHHHHHHHHHHHHhcCCEEecCCCh--------HHeEEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccc
Confidence            4567899999999998 999999999        999994      4458999999998766432     2344678999


Q ss_pred             cchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH------HHHHHHhhcccCCCCC-----------------
Q psy4332          81 MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD------LEVLENISHLHADDGE-----------------  137 (188)
Q Consensus        81 ~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~------~~~~~~~~~~~~~~~~-----------------  137 (188)
                      +|||.+.+..++.++||||+|+++|+++|  |..||.+...      ......+.......+.                 
T Consensus       202 ~aPE~~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  279 (373)
T 1q8y_A          202 RSPEVLLGAPWGCGADIWSTACLIFELIT--GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG  279 (373)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHH--SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred             cCcHHHhCCCCCchHhHHHHHHHHHHHHh--CCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcc
Confidence            99999998889999999999999999995  6788876532      1222222111110000                 


Q ss_pred             -c-----------------ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         138 -F-----------------IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       138 -~-----------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                       .                 ........+.++.+++.+||+.||++|||++|+  |+||++..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             hhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence             0                 000112335778999999999999999999999  78998753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=7.2e-30  Score=193.12  Aligned_cols=159  Identities=18%  Similarity=0.297  Sum_probs=99.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.   ++.+||+|||++......    ......+++.|+|||
T Consensus       132 ~i~~ql~~~l~~LH~~~ivH~dlkp--------~NIll~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE  199 (336)
T 3fhr_A          132 EIMRDIGTAIQFLHSHNIAHRDVKP--------ENLLYTSKEKDAVLKLTDFGFAKETTQN----ALQTPCYTPYYVAPE  199 (336)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCH--------HHEEEEecCCCceEEEeccccceecccc----ccccCCCCcCccChh
Confidence            4567889999999999999999999        9999976   455999999998765432    223445688899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcc-cCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHL-HADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+............. ...............+.++.+++.+||..||+
T Consensus       200 ~~~~~~~~~~~Di~slG~il~~l~--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  277 (336)
T 3fhr_A          200 VLGPEKYDKSCDMWSLGVIMYILL--CGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPT  277 (336)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHH--HSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHH--HCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChh
Confidence            998778889999999999999999  567888766543332211110 00111111222246788999999999999999


Q ss_pred             CCCCHHHH--HHHHHhccC
Q psy4332         164 ERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~~  180 (188)
                      +|||++|+  |+||++...
T Consensus       278 ~Rpt~~ell~hp~~~~~~~  296 (336)
T 3fhr_A          278 ERLTITQFMNHPWINQSMV  296 (336)
T ss_dssp             GSCCHHHHHHSHHHHTGGG
T ss_pred             HCcCHHHHhcCcccccccc
Confidence            99999999  789987543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.96  E-value=3.8e-29  Score=186.16  Aligned_cols=155  Identities=26%  Similarity=0.412  Sum_probs=119.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       130 ~~~~~i~~~l~~lH~~~i~H~dikp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  201 (302)
T 4e5w_A          130 KYAVQICKGMDYLGSRQYVHRDLAA--------RNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL  201 (302)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHhhcCCcccCCCch--------heEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee
Confidence            4567899999999999999999999        9999999999999999998876544322 233455677889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCC--------------CHH-HHHHHhhcccCCCCCcccCCCCCChHHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGL--------------TDL-EVLENISHLHADDGEFIYLPTPQTTKDIL  151 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~--------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (188)
                      .+..++.++||||+|+++|+++|  |..|+...              ... .....+...      .........++++.
T Consensus       202 ~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~  273 (302)
T 4e5w_A          202 MQSKFYIASDVWSFGVTLHELLT--YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG------KRLPCPPNCPDEVY  273 (302)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHT--TTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT------CCCCCCTTCCHHHH
T ss_pred             cCCCCCcchhHHHHHHHHHHHHH--ccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc------CCCCCCCCCCHHHH
Confidence            98888999999999999999995  44554321              111 111111111      11122346788999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         152 DLMNECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       152 ~li~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      +++.+||+.||++|||+.++.+.|+++
T Consensus       274 ~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          274 QLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999875

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=2.1e-30  Score=194.99  Aligned_cols=152  Identities=21%  Similarity=0.301  Sum_probs=111.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc----------cccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY----------RVHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~   77 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++.........          .......+|
T Consensus       168 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          168 HIFIQIAEAVEFLHSKGLMHRDLKP--------SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             HHHHHHHHHHHHHHhCCeeecCCCc--------ccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            4667899999999999999999999        9999999999999999998876543211          122345689


Q ss_pred             ccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHH
Q psy4332          78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNEC  157 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  157 (188)
                      +.|+|||.+.+..++.++||||+|+++|++++  +..|+..  ............     . .......++++.+++.+|
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~--~~~~~~~--~~~~~~~~~~~~-----~-~~~~~~~~~~~~~li~~~  309 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLY--SFSTQME--RVRIITDVRNLK-----F-PLLFTQKYPQEHMMVQDM  309 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHS--CCCCHHH--HHHHHHHHHTTC-----C-CHHHHHHCHHHHHHHHHH
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHH--cCCChhH--HHHHHHHhhccC-----C-CcccccCChhHHHHHHHH
Confidence            99999999998889999999999999999994  4333211  111222221110     0 000112346789999999


Q ss_pred             hccCCCCCCCHHHH--HHHHHh
Q psy4332         158 WKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       158 l~~dp~~Rps~~el--~~~l~~  177 (188)
                      |+.||++||+++|+  |+||++
T Consensus       310 l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          310 LSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ccCCCCcCCCHHHHhhchhhhc
Confidence            99999999999999  567765

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=4e-29  Score=187.59  Aligned_cols=159  Identities=13%  Similarity=0.135  Sum_probs=117.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE----cCcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV----GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.|+.|+|++||+|+||||        +||++    +.++.+||+|||++.......   ......+++.|+||
T Consensus       116 ~i~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aP  184 (319)
T 4euu_A          116 IVLRDVVGGMNHLRENGIVHRNIKP--------GNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHP  184 (319)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEEECTTSCEEEEECCCTTCEECCTTC---CBCCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCH--------HHEEEeccCCCCceEEEccCCCceecCCCC---ceeecccCCCccCH
Confidence            3567889999999999999999999        99998    788889999999987765433   22345688999999


Q ss_pred             hhhh--------cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC----HHHHHHHhhcccCCCCC--------------
Q psy4332          84 ESVR--------LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT----DLEVLENISHLHADDGE--------------  137 (188)
Q Consensus        84 e~~~--------~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~----~~~~~~~~~~~~~~~~~--------------  137 (188)
                      |.+.        +..++.++||||+|+++|+++|  |..||....    ..+....+.........              
T Consensus       185 E~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  262 (319)
T 4euu_A          185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT--GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWS  262 (319)
T ss_dssp             HHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHH--SSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEE
T ss_pred             HHhhhccccccccCCCCcHHHHHHHHHHHHHHHh--CCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccC
Confidence            9986        4668899999999999999995  678886432    23333333322111000              


Q ss_pred             -ccc---CCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhcc
Q psy4332         138 -FIY---LPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKN  179 (188)
Q Consensus       138 -~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~  179 (188)
                       ...   ......+..+.+++.+||+.||++|||++|+++..++..
T Consensus       263 ~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          263 GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             SSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             ccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence             000   001123567899999999999999999999988777653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=4.1e-29  Score=186.88  Aligned_cols=157  Identities=17%  Similarity=0.157  Sum_probs=113.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++........ .......+++.|+|||.+.
T Consensus       138 ~i~~qi~~~l~~lH~~~i~H~dlkp--------~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          138 AIVRQIGSALDAAHAAGATHRDVKP--------ENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTC
T ss_pred             HHHHHHHHHHHHHHHCcCCcCCCCh--------HHEEEcCCCCEEEecCccCcccccccc-ccccccCCCcCccCHHHHc
Confidence            4577889999999999999999999        999999999999999999876543321 1223455788999999998


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++||||+|+++|+++|  |..||.+.........+...    ........+.++.++.+++.+||..||++|| 
T Consensus       209 ~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~  282 (309)
T 2h34_A          209 ESHATYRADIYALTCVLYECLT--GSPPYQGDQLSVMGAHINQA----IPRPSTVRPGIPVAFDAVIARGMAKNPEDRYV  282 (309)
T ss_dssp             C----CCCHHHHHHHHHHHHHH--SSCSSCSCHHHHHHHHHHSC----CCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCS
T ss_pred             CCCCCchHhHHHHHHHHHHHHH--CCCCCCCchHHHHHHHhccC----CCCccccCCCCCHHHHHHHHHhccCCHHHHHH
Confidence            8888999999999999999995  67899887654433333221    1111222356788999999999999999999 


Q ss_pred             CHHHHHHHHHhcc
Q psy4332         167 SFTEIHLFLQRKN  179 (188)
Q Consensus       167 s~~el~~~l~~~~  179 (188)
                      +++++...|++.-
T Consensus       283 s~~~l~~~l~~~l  295 (309)
T 2h34_A          283 TCGDLSAAAHAAL  295 (309)
T ss_dssp             SHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHH
Confidence            9999988887663

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=2e-29  Score=187.04  Aligned_cols=155  Identities=17%  Similarity=0.307  Sum_probs=115.8

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcC-cceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++. ++.+||+|||++........  ......+++.|+|||.+.
T Consensus       127 ~~~qi~~~l~~lH~~~i~H~dl~p--------~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~  196 (295)
T 2clq_A          127 YTKQILEGLKYLHDNQIVHRDIKG--------DNVLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIID  196 (295)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSG--------GGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHhCCEEccCCCh--------hhEEEECCCCCEEEeecccccccCCCCC--cccccCCCccccChhhhc
Confidence            467889999999999999999999        9999987 88999999999876643321  223456788999999997


Q ss_pred             cCC--CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHH-HHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          88 LRK--FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLE-VLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        88 ~~~--~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      +..  ++.++||||+|+++|++++  |..||....... .........     .........+.++.+++.+||..||++
T Consensus       197 ~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~  269 (295)
T 2clq_A          197 KGPRGYGKAADIWSLGCTIIEMAT--GKPPFYELGEPQAAMFKVGMFK-----VHPEIPESMSAEAKAFILKCFEPDPDK  269 (295)
T ss_dssp             HGGGGCSHHHHHHHHHHHHHHHHH--TSCTTGGGSSHHHHHHHHHHHC-----CCCCCCTTSCHHHHHHHHHTTCSSTTT
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHH--CCCCccCCCchhHHHHhhcccc-----ccccccccCCHHHHHHHHHHccCChhh
Confidence            643  7889999999999999995  678887653322 111111111     011122456889999999999999999


Q ss_pred             CCCHHHH--HHHHHhccC
Q psy4332         165 RPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~  180 (188)
                      ||++.++  |+||+....
T Consensus       270 Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          270 RACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             SCCHHHHHTSGGGCC---
T ss_pred             CCCHHHHhcChhhhhccc
Confidence            9999999  788876544

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=3.7e-29  Score=189.69  Aligned_cols=158  Identities=18%  Similarity=0.262  Sum_probs=121.8

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.|+.|+|+ +||+|+||||        +||+++.++.+||+|||++......    ......++..|+|||.+
T Consensus       155 ~i~~qi~~~l~~lH~~~~i~H~dl~p--------~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~  222 (348)
T 2pml_X          155 CIIKSVLNSFSYIHNEKNICHRDVKP--------SNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFF  222 (348)
T ss_dssp             HHHHHHHHHHHHHHHTSCEECCCCCG--------GGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGG
T ss_pred             HHHHHHHHHHHHHhccCCEeecCCCh--------HhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhh
Confidence            356788999999998 9999999999        9999999999999999998765433    22455678899999999


Q ss_pred             hcC-CCCC-hhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcc------------cCCCCCChHHHH
Q psy4332          87 RLR-KFTT-KSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFI------------YLPTPQTTKDIL  151 (188)
Q Consensus        87 ~~~-~~~~-~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~  151 (188)
                      .+. .++. ++||||+|++++++++  |..||..... .+....+...........            .......+.++.
T Consensus       223 ~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  300 (348)
T 2pml_X          223 SNESSYNGAKVDIWSLGICLYVMFY--NVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI  300 (348)
T ss_dssp             SSCCCEEHHHHHHHHHHHHHHHHHH--SSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHH
T ss_pred             cCCCCCCcchhhHHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHH
Confidence            866 4555 8999999999999994  6789987765 566655543221111000            000145688999


Q ss_pred             HHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         152 DLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       152 ~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      +++.+||+.||++||++.|+  |+||++.+
T Consensus       301 ~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          301 DFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            99999999999999999999  77887653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=5.8e-29  Score=184.12  Aligned_cols=156  Identities=22%  Similarity=0.299  Sum_probs=122.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.+   +.+||+|||++.......   ......+++.|+|||
T Consensus       125 ~i~~qi~~~l~~LH~~~i~H~dl~p--------~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE  193 (287)
T 2wei_A          125 RIIKQVFSGITYMHKHNIVHRDLKP--------ENILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPE  193 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEESCSSTTCCEEECSTTGGGTBCCCS---SCSCHHHHHTTCCHH
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCh--------hhEEEecCCCcccEEEeccCcceeecCCC---ccccccCcccccChH
Confidence            4567899999999999999999999        99999654   469999999987654332   112334678899999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      .+.+ .++.++||||+|+++++++  +|..||.+....+....+........   .......+.++.+++.+||..||++
T Consensus       194 ~~~~-~~~~~~Di~slG~~l~~l~--~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~  267 (287)
T 2wei_A          194 VLRG-TYDEKCDVWSAGVILYILL--SGTPPFYGKNEYDILKRVETGKYAFD---LPQWRTISDDAKDLIRKMLTFHPSL  267 (287)
T ss_dssp             HHTT-CCCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCCCCC---SGGGTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HhcC-CCCCchhhHhHHHHHHHHH--hCCCCCCCCCHHHHHHHHHcCCCCCC---chhhhhcCHHHHHHHHHHcccChhh
Confidence            9874 5889999999999999999  46789998887777666654322111   1112456789999999999999999


Q ss_pred             CCCHHHH--HHHHHhccC
Q psy4332         165 RPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       165 Rps~~el--~~~l~~~~~  180 (188)
                      |||+.++  |+||++..+
T Consensus       268 Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          268 RITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             SCCHHHHHHSHHHHHHCC
T ss_pred             CcCHHHHhcCHHHhcccc
Confidence            9999999  779987654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=4.4e-29  Score=184.13  Aligned_cols=150  Identities=15%  Similarity=0.199  Sum_probs=118.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.......   ......+++.|+|||.+.
T Consensus       126 ~i~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~  194 (284)
T 2a19_B          126 ELFEQITKGVDYIHSKKLINRDLKP--------SNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQIS  194 (284)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEEETTEEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeeccCCH--------HHEEEcCCCCEEECcchhheeccccc---cccccCCcccccChhhhc
Confidence            3567889999999999999999999        99999999999999999987765432   223455788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+|+++++++|  +..|+...  ......+...         .....++.++.+++.+||..||++||+
T Consensus       195 ~~~~~~~~Di~slG~il~~l~~--~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps  261 (284)
T 2a19_B          195 SQDYGKEVDLYALGLILAELLH--VCDTAFET--SKFFTDLRDG---------IISDIFDKKEKTLLQKLLSKKPEDRPN  261 (284)
T ss_dssp             CSCCCTHHHHHHHHHHHHHHHS--CCSSHHHH--HHHHHHHHTT---------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCcchhhhHHHHHHHHHHHh--cCCcchhH--HHHHHHhhcc---------cccccCCHHHHHHHHHHccCChhhCcC
Confidence            8889999999999999999994  44554321  1222222211         112446789999999999999999999


Q ss_pred             HHHHHHHHHhccCC
Q psy4332         168 FTEIHLFLQRKNLG  181 (188)
Q Consensus       168 ~~el~~~l~~~~~~  181 (188)
                      +.|+...|+.+...
T Consensus       262 ~~e~l~~l~~~~~~  275 (284)
T 2a19_B          262 TSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHhhC
Confidence            99999888877543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=7.8e-30  Score=198.21  Aligned_cols=154  Identities=22%  Similarity=0.304  Sum_probs=110.2

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCc---ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK---FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ++.+++.|+.|+|++||+|+||||        +||+++.+   +.+||+|||+++......   ......+|+.|+|||+
T Consensus       244 i~~qi~~~l~~LH~~~ivHrDlkp--------~NIll~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~  312 (419)
T 3i6u_A          244 YFYQMLLAVQYLHENGIIHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEV  312 (419)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCG--------GGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTT
T ss_pred             HHHHHHHHHHHHHHCCccccCCCh--------HhEEEecCCCcceEEEeecccceecCCCc---cccccCCCCCccCcee
Confidence            457889999999999999999999        99999754   459999999998765432   2234568889999999


Q ss_pred             hhc---CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          86 VRL---RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        86 ~~~---~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +.+   ..++.++||||+|+++|+++  +|..||.+.... .....+......   .........++++.+++.+||+.|
T Consensus       313 ~~~~~~~~~~~~~DiwslG~il~~ll--tg~~pf~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~li~~~L~~d  387 (419)
T 3i6u_A          313 LVSVGTAGYNRAVDCWSLGVILFICL--SGYPPFSEHRTQVSLKDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVD  387 (419)
T ss_dssp             TC----CTTHHHHHHHHHHHHHHHHH--HSSCSSCCCSSSCCHHHHHHTTCCC---CCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             eecCCCCCCCchhhhHhHHHHHHHHH--HCCCCCCCCcchHHHHHHHhcCCCC---CCchhhcccCHHHHHHHHHHccCC
Confidence            853   45778999999999999999  467888765322 222223221111   111112356789999999999999


Q ss_pred             CCCCCCHHHH--HHHHHhc
Q psy4332         162 PTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~~  178 (188)
                      |++||+++|+  |+||++.
T Consensus       388 P~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          388 PKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             TTTSCCHHHHHHSGGGCCH
T ss_pred             hhHCcCHHHHhCCcccCCh
Confidence            9999999999  7788643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=2.8e-29  Score=188.68  Aligned_cols=144  Identities=22%  Similarity=0.378  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++ .++.+||+|||++......    ......+++.|+|||.+
T Consensus       153 ~i~~qi~~~L~~LH~~~ivH~Dlkp--------~NIll~~~~~~~kL~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~  220 (320)
T 3a99_A          153 SFFWQVLEAVRHCHNCGVLHRDIKD--------ENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWI  220 (320)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEETTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcEeCCCCH--------HHEEEeCCCCCEEEeeCccccccccc----cccCCCCCccCCChHHh
Confidence            3567899999999999999999999        999998 6789999999998766432    22345688899999999


Q ss_pred             hcCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      .+... +.++||||+|+++|+++|  |..||....  ....    ..       .......+.++.+++.+||+.||++|
T Consensus       221 ~~~~~~~~~~Di~slG~il~el~~--g~~pf~~~~--~~~~----~~-------~~~~~~~~~~~~~li~~~l~~dp~~R  285 (320)
T 3a99_A          221 RYHRYHGRSAAVWSLGILLYDMVC--GDIPFEHDE--EIIR----GQ-------VFFRQRVSSECQHLIRWCLALRPSDR  285 (320)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHH--SSCSCCSHH--HHHH----CC-------CCCSSCCCHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCCCCccchHHhHHHHHHHHHH--CCCCCCChh--hhhc----cc-------ccccccCCHHHHHHHHHHccCChhhC
Confidence            87665 678999999999999995  678886532  1111    10       11224567899999999999999999


Q ss_pred             CCHHHH--HHHHHhc
Q psy4332         166 PSFTEI--HLFLQRK  178 (188)
Q Consensus       166 ps~~el--~~~l~~~  178 (188)
                      |+++++  |+||++.
T Consensus       286 ps~~~ll~hp~~~~~  300 (320)
T 3a99_A          286 PTFEEIQNHPWMQDV  300 (320)
T ss_dssp             CCHHHHHTSGGGSSC
T ss_pred             cCHHHHhcCHhhcCc
Confidence            999999  6677754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.95  E-value=3.4e-29  Score=195.22  Aligned_cols=156  Identities=17%  Similarity=0.182  Sum_probs=110.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-----cceEEEccCCCCccCCCCccc-cccCCCCCCcccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-----KFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWM   81 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-----~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~   81 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.     ...+||+|||+++........ .......||+.|+
T Consensus       122 ~i~~qi~~aL~~LH~~~ivHrDlKp--------~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~  193 (432)
T 3p23_A          122 TLLQQTTSGLAHLHSLNIVHRDLKP--------HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI  193 (432)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCST--------TSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSC
T ss_pred             HHHHHHHHHHHHHHHCcCEeCCCCH--------HHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCcc
Confidence            4667899999999999999999999        9999953     335889999998876533211 1233456899999


Q ss_pred             chhhhh---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHh
Q psy4332          82 AWESVR---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        82 ~Pe~~~---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      |||.+.   +..++.++||||+||++++++| .|..||...............    ......+....+..+.+++.+||
T Consensus       194 APE~l~~~~~~~~t~~~DiwSlG~il~ellt-~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L  268 (432)
T 3p23_A          194 APEMLSEDCKENPTYTVDIFSAGCVFYYVIS-EGSHPFGKSLQRQANILLGAC----SLDCLHPEKHEDVIARELIEKMI  268 (432)
T ss_dssp             CGGGTSCC---CCCTHHHHHHHHHHHHHHHT-TSCBTTBSTTTHHHHHHTTCC----CCTTSCTTCHHHHHHHHHHHHHS
T ss_pred             ChhhhhcccccCCCcHHHHHHHHHHHHHHHc-CCCCCcchhhHHHHHHHhccC----CccccCccccccHHHHHHHHHHH
Confidence            999997   3567789999999999999995 267888766544433222111    11111122233566889999999


Q ss_pred             ccCCCCCCCHHHH--HHHHH
Q psy4332         159 KRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       159 ~~dp~~Rps~~el--~~~l~  176 (188)
                      +.||++||+++++  |+||.
T Consensus       269 ~~dP~~Rps~~evl~hp~f~  288 (432)
T 3p23_A          269 AMDPQKRPSAKHVLKHPFFW  288 (432)
T ss_dssp             CSSGGGSCCHHHHHTSTTTC
T ss_pred             hCCHhhCCCHHHHHhCcccc
Confidence            9999999999999  66664

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.95  E-value=7.1e-29  Score=183.16  Aligned_cols=147  Identities=14%  Similarity=0.148  Sum_probs=108.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-------------------ceEEEccCCCCccCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-------------------FEIKISDFATDSDMFSSDYY   68 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-------------------~~~kl~dfg~~~~~~~~~~~   68 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.+                   ..+||+|||++......   
T Consensus       119 ~i~~qi~~al~~lH~~~ivH~Dikp--------~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  187 (289)
T 1x8b_A          119 DLLLQVGRGLRYIHSMSLVHMDIKP--------SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---  187 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEC--------------------CCCEEECCCTTCEETTCS---
T ss_pred             HHHHHHHHHHHHHHhCCEeecCCCH--------HHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---
Confidence            4577899999999999999999999        99999744                   47899999998766432   


Q ss_pred             cccCCCCCCccccchhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCCh
Q psy4332          69 RVHDNTSLPIRWMAWESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT  147 (188)
Q Consensus        69 ~~~~~~~~~~~~~~Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (188)
                         ....+++.|+|||.+.+. .++.++||||+|+++++++  ++..++....   ....+....     . .......+
T Consensus       188 ---~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~--~~~~~~~~~~---~~~~~~~~~-----~-~~~~~~~~  253 (289)
T 1x8b_A          188 ---QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAA--GAEPLPRNGD---QWHEIRQGR-----L-PRIPQVLS  253 (289)
T ss_dssp             ---CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHT--TCCCCCSSSH---HHHHHHTTC-----C-CCCSSCCC
T ss_pred             ---cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHh--cCCCCCcchh---HHHHHHcCC-----C-CCCCcccC
Confidence               233478899999999765 4567999999999999999  4444443332   222222211     1 11224578


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      .++.+++.+||+.||++||++.++  |+||++..
T Consensus       254 ~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          254 QEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            899999999999999999999999  77877543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.95  E-value=7.5e-29  Score=186.68  Aligned_cols=161  Identities=25%  Similarity=0.401  Sum_probs=119.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.++|++||+|+||||        +||+++.++.+||+|||++......... .......++..|+|||.+
T Consensus       149 ~i~~qi~~aL~~LH~~~ivH~dikp--------~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  220 (326)
T 2w1i_A          149 QYTSQICKGMEYLGTKRYIHRDLAT--------RNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL  220 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCEeccCCCc--------ceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhh
Confidence            3567899999999999999999999        9999999999999999998876543322 122344567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH------------HHHHHHhhcccCCCCCcccCCCCCChHHHHHHH
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD------------LEVLENISHLHADDGEFIYLPTPQTTKDILDLM  154 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  154 (188)
                      .+..++.++||||+|+++++++|  +..||.....            ......+...... ... ......++.++.+++
T Consensus       221 ~~~~~~~~~Di~slG~il~el~t--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~li  296 (326)
T 2w1i_A          221 TESKFSVASDVWSFGVVLYELFT--YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN-NGR-LPRPDGCPDEIYMIM  296 (326)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHH--TTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT-TCC-CCCCTTCCHHHHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHHh--cCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc-CCC-CCCCCcccHHHHHHH
Confidence            98888999999999999999995  4556543211            0001011110000 111 112345788999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         155 NECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       155 ~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .+||..||++||++.++...|+++.+
T Consensus       297 ~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          297 TECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999988754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=4.4e-29  Score=183.88  Aligned_cols=149  Identities=19%  Similarity=0.252  Sum_probs=117.4

Q ss_pred             ccccchhhhhhhhcccc-----cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNG-----VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~-----i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      .++.+++.++.|+|++|     |+|+||||        +||+++.++.+||+|||++........  ......++..|+|
T Consensus       115 ~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p--------~NIl~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~a  184 (279)
T 2w5a_A          115 RVMTQLTLALKECHRRSDGGHTVLHRDLKP--------ANVFLDGKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMS  184 (279)
T ss_dssp             HHHHHHHHHHHHHHHHC------CCCCCSG--------GGEEECSSSCEEECCCCHHHHC---CH--HHHHHHSCCTTCC
T ss_pred             HHHHHHHHHHHHHhcccCCCCeeEEeccch--------hhEEEcCCCCEEEecCchheeeccccc--cccccCCCccccC
Confidence            45678899999999999     99999999        999999999999999999876543221  1122346778999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||.+.+..++.++||||+|+++|+++|  |..||......+....+.....      .......+.++.+++.+||..||
T Consensus       185 PE~~~~~~~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~~l~~~p  256 (279)
T 2w5a_A          185 PEQMNRMSYNEKSDIWSLGCLLYELCA--LMPPFTAFSQKELAGKIREGKF------RRIPYRYSDELNEIITRMLNLKD  256 (279)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHTCC------CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             hHHhccCCCCchhhHHHHHHHHHHHHH--CCCCCcccCHHHHHHHHhhccc------ccCCcccCHHHHHHHHHHcCCCc
Confidence            999998889999999999999999995  5789998877766666554321      11224568899999999999999


Q ss_pred             CCCCCHHHHHHH
Q psy4332         163 TERPSFTEIHLF  174 (188)
Q Consensus       163 ~~Rps~~el~~~  174 (188)
                      ++||+++|++..
T Consensus       257 ~~Rps~~~ll~~  268 (279)
T 2w5a_A          257 YHRPSVEEILEN  268 (279)
T ss_dssp             GGSCCHHHHHTS
T ss_pred             ccCCCHHHHHhC
Confidence            999999999553

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=1.5e-28  Score=187.75  Aligned_cols=149  Identities=10%  Similarity=0.032  Sum_probs=113.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-----------cceEEEccCCCCccCCCCccccccCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-----------KFEIKISDFATDSDMFSSDYYRVHDNTSL   76 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~   76 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.           ++.+||+|||+++...............|
T Consensus       176 ~i~~qi~~~L~~lH~~~ivHrDiKp--------~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  247 (365)
T 3e7e_A          176 SFAMRMLYMIEQVHDCEIIHGDIKP--------DNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCE  247 (365)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCSG--------GGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSC
T ss_pred             HHHHHHHHHHHHHhhCCeecCCCCH--------HHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecC
Confidence            4678899999999999999999999        9999988           78999999999976543222234456678


Q ss_pred             CccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHH
Q psy4332          77 PIRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE  156 (188)
Q Consensus        77 ~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  156 (188)
                      |+.|+|||++.+..++.++||||+|+++|+|+|  |..||.......       ..    ..........++.+.+++..
T Consensus       248 t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt--g~~pf~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~  314 (365)
T 3e7e_A          248 TSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF--GTYMKVKNEGGE-------CK----PEGLFRRLPHLDMWNEFFHV  314 (365)
T ss_dssp             TTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHH--SSCCCEEEETTE-------EE----ECSCCTTCSSHHHHHHHHHH
T ss_pred             CCCCCChHHhcCCCCCccccHHHHHHHHHHHHh--CCCccccCCCCc-------ee----echhccccCcHHHHHHHHHH
Confidence            999999999998889999999999999999995  567775432210       00    00011112346789999999


Q ss_pred             HhccCCCCCC-CHHHHHHHHHh
Q psy4332         157 CWKRSPTERP-SFTEIHLFLQR  177 (188)
Q Consensus       157 cl~~dp~~Rp-s~~el~~~l~~  177 (188)
                      |+..+|.+|+ +++++...|++
T Consensus       315 ~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          315 MLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             HHCCCCTTCCCCHHHHHHHHHH
T ss_pred             HcCCCCCCcchHHHHHHHHHHH
Confidence            9999999985 67777555444

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=1.3e-28  Score=189.99  Aligned_cols=158  Identities=13%  Similarity=0.151  Sum_probs=116.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEE----cCcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLV----GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      .++.+++.|+.|+|++||+|+||||        +||++    +.++.+||+|||+++......   ......+++.|+||
T Consensus       116 ~i~~qi~~aL~~LH~~~ivH~Dlkp--------~NIll~~~~~~~~~~kL~DFG~a~~~~~~~---~~~~~~gt~~y~aP  184 (396)
T 4eut_A          116 IVLRDVVGGMNHLRENGIVHRNIKP--------GNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHP  184 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEEEECTTSCEEEEECCGGGCEECCCGG---GSSCSSSCCTTCCH
T ss_pred             HHHHHHHHHHHHHHHCCEEECCcCH--------HHEEEeecCCCceeEEEecCCCceEccCCC---ccccccCCccccCH
Confidence            3567889999999999999999999        99998    778889999999987765432   23345688899999


Q ss_pred             hhhhc--------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCC----CHHHHHHHhhcccCCCCC------------c-
Q psy4332          84 ESVRL--------RKFTTKSDVWSFGVTLWEILNLARHRPYEGL----TDLEVLENISHLHADDGE------------F-  138 (188)
Q Consensus        84 e~~~~--------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~----~~~~~~~~~~~~~~~~~~------------~-  138 (188)
                      |.+.+        ..++.++||||+|+++|+++|  |..||.+.    ...+....+.........            + 
T Consensus       185 E~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~t--g~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  262 (396)
T 4eut_A          185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT--GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWS  262 (396)
T ss_dssp             HHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH--SSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEE
T ss_pred             HHhhccccccccccCCCcHHHHHHHHHHHHHHHH--CCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccC
Confidence            99875        456779999999999999995  67888643    223344444322111000            0 


Q ss_pred             -ccCCC----CCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         139 -IYLPT----PQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       139 -~~~~~----~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                       .....    ...+..+.+++.+||+.||++||++.++.+.++++
T Consensus       263 ~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          263 GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             SSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             ccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence             00001    12356788999999999999999999998877765

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.95  E-value=9e-29  Score=185.34  Aligned_cols=162  Identities=17%  Similarity=0.209  Sum_probs=118.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-------cccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-------RVHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~~   80 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||+|||++.........       .......+++.|
T Consensus       138 ~i~~qi~~~L~~LH~~~ivH~dlkp--------~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  209 (317)
T 2buj_A          138 WLLLGICRGLEAIHAKGYAHRDLKP--------TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY  209 (317)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCccc
Confidence            3577899999999999999999999        9999999999999999987665321110       001123457889


Q ss_pred             cchhhhhcCC---CCChhhHHHHHHHHHHHHhCCCCCCCCCCCH--HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHH
Q psy4332          81 MAWESVRLRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTD--LEVLENISHLHADDGEFIYLPTPQTTKDILDLMN  155 (188)
Q Consensus        81 ~~Pe~~~~~~---~~~~~di~slG~~~~~l~t~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  155 (188)
                      +|||.+.+..   ++.++||||+|+++|++++  |..||.....  ......+..      ..........+.++.+++.
T Consensus       210 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~  281 (317)
T 2buj_A          210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMF--GEGPYDMVFQKGDSVALAVQN------QLSIPQSPRHSSALWQLLN  281 (317)
T ss_dssp             CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHH--SSCTTHHHHHTTSCHHHHHHC------C--CCCCTTSCHHHHHHHH
T ss_pred             CCHhHhccCCCcCCCchhhHHHHHHHHHHHHh--CCCChhhhhcccchhhHHhhc------cCCCCccccCCHHHHHHHH
Confidence            9999987543   6889999999999999994  5678753110  011111111      1111223456889999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhccCCCCCC
Q psy4332         156 ECWKRSPTERPSFTEIHLFLQRKNLGYVPP  185 (188)
Q Consensus       156 ~cl~~dp~~Rps~~el~~~l~~~~~~~~~~  185 (188)
                      +||..||++||++.+++..|+++......+
T Consensus       282 ~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~  311 (317)
T 2buj_A          282 SMMTVDPHQRPHIPLLLSQLEALQPPAPGQ  311 (317)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred             HHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence            999999999999999999999987655443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.95  E-value=6.8e-29  Score=186.58  Aligned_cols=152  Identities=22%  Similarity=0.285  Sum_probs=112.7

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      ++.+++.++.|+|++||+|+||||        +||+++.++.   +||+|||++........   .....+++.|+|||.
T Consensus       119 ~~~qi~~~l~~lH~~~ivH~dlkp--------~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~  187 (322)
T 2ycf_A          119 YFYQMLLAVQYLHENGIIHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEV  187 (322)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSG--------GGEEESSSSSSCCEEECCCTTCEECCCCHH---HHHHHSCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCH--------HHEEEecCCCCCeEEEccCccceecccccc---cccccCCcCccCchh
Confidence            467889999999999999999999        9999987654   99999999876643321   122346788999999


Q ss_pred             hh---cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH-HHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          86 VR---LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL-EVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        86 ~~---~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      +.   ...++.++||||+|+++|++++  |..||...... .....+.......   ........+.++.+++.+||..|
T Consensus       188 ~~~~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~d  262 (322)
T 2ycf_A          188 LVSVGTAGYNRAVDCWSLGVILFICLS--GYPPFSEHRTQVSLKDQITSGKYNF---IPEVWAEVSEKALDLVKKLLVVD  262 (322)
T ss_dssp             HHHTTTTTCTTHHHHHHHHHHHHHHHH--SSCSSCSTTCSSCHHHHHHHTCCCC---CHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             hccCCCCCCCchhhHHHHHHHHHHHHh--CCCCCcccchHHHHHHHHHhCcccc---CchhhhhcCHHHHHHHHHHcccC
Confidence            75   3567889999999999999994  57888765322 2222222211110   00111356789999999999999


Q ss_pred             CCCCCCHHHH--HHHHH
Q psy4332         162 PTERPSFTEI--HLFLQ  176 (188)
Q Consensus       162 p~~Rps~~el--~~~l~  176 (188)
                      |++||++.++  |+||+
T Consensus       263 P~~Rps~~~~l~h~~~~  279 (322)
T 2ycf_A          263 PKARFTTEEALRHPWLQ  279 (322)
T ss_dssp             TTTSCCHHHHHTSGGGC
T ss_pred             HhhCCCHHHHhhCcCcC
Confidence            9999999999  55654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=5.3e-28  Score=179.66  Aligned_cols=153  Identities=17%  Similarity=0.238  Sum_probs=109.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc------------ccccCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY------------YRVHDNTS   75 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~   75 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.+||+|||++........            ........
T Consensus       120 ~i~~qi~~~l~~LH~~~i~H~dlkp--------~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (303)
T 1zy4_A          120 RLFRQILEALSYIHSQGIIHRDLKP--------MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI  191 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECCCCCCSCTTC-----------------------
T ss_pred             HHHHHHHHHHHHHHhCCeecccCCH--------HhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCC
Confidence            3567889999999999999999999        999999999999999999876643211            11223445


Q ss_pred             CCccccchhhhhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCC-CHHHHHHHhhcccCCCCCcccCCCCCChHHHHHH
Q psy4332          76 LPIRWMAWESVRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGL-TDLEVLENISHLHADDGEFIYLPTPQTTKDILDL  153 (188)
Q Consensus        76 ~~~~~~~Pe~~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (188)
                      +++.|+|||.+.+. .++.++||||+|+++|++++     ||... ........+....   ...........+..+.++
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-----p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l  263 (303)
T 1zy4_A          192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-----PFSTGMERVNILKKLRSVS---IEFPPDFDDNKMKVEKKI  263 (303)
T ss_dssp             --CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHHHHHSTT---CCCCTTCCTTTSHHHHHH
T ss_pred             CcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-----ccCCchhHHHHHHhccccc---cccCccccccchHHHHHH
Confidence            78889999999754 68899999999999999993     55432 2223333333211   111112234556789999


Q ss_pred             HHHHhccCCCCCCCHHHH--HHHHH
Q psy4332         154 MNECWKRSPTERPSFTEI--HLFLQ  176 (188)
Q Consensus       154 i~~cl~~dp~~Rps~~el--~~~l~  176 (188)
                      +.+||..||++|||+.++  |+||+
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~  288 (303)
T 1zy4_A          264 IRLLIDHDPNKRPGARTLLNSGWLP  288 (303)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred             HHHHHhcCcccCcCHHHHhCCCCcC
Confidence            999999999999999999  56665

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=5.6e-28  Score=180.71  Aligned_cols=146  Identities=21%  Similarity=0.336  Sum_probs=114.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++ .++.+||+|||++.......    .....++..|+|||.+
T Consensus       143 ~~~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~  210 (312)
T 2iwi_A          143 CFFGQVVAAIQHCHSRGVVHRDIKD--------ENILIDLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWI  210 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTEECCCCSG--------GGEEEETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCh--------hhEEEeCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceee
Confidence            3677899999999999999999999        999999 78999999999987664432    2345578889999999


Q ss_pred             hcCCCC-ChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKFT-TKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~~-~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      .+..+. .++||||+|+++|++++  |..||....  +...    ..       .......+.++.+++.+||..||++|
T Consensus       211 ~~~~~~~~~~Di~slG~il~~l~~--g~~pf~~~~--~~~~----~~-------~~~~~~~~~~~~~li~~~l~~~p~~R  275 (312)
T 2iwi_A          211 SRHQYHALPATVWSLGILLYDMVC--GDIPFERDQ--EILE----AE-------LHFPAHVSPDCCALIRRCLAPKPSSR  275 (312)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHH--SSCSCCSHH--HHHH----TC-------CCCCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             ecCCCCCccchHHHHHHHHHHHHH--CCCCCCChH--HHhh----hc-------cCCcccCCHHHHHHHHHHccCChhhC
Confidence            876654 58999999999999995  678886532  2111    10       11124567899999999999999999


Q ss_pred             CCHHHH--HHHHHhccC
Q psy4332         166 PSFTEI--HLFLQRKNL  180 (188)
Q Consensus       166 ps~~el--~~~l~~~~~  180 (188)
                      |+++|+  |+||++..+
T Consensus       276 ps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          276 PSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             CCHHHHHHSTTTCC---
T ss_pred             cCHHHHhcChhhcCchh
Confidence            999999  568876544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.94  E-value=3.9e-27  Score=190.59  Aligned_cols=159  Identities=16%  Similarity=0.155  Sum_probs=113.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcce---EEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFE---IKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.++.   +||+|||++.......   ......+++.|+|||
T Consensus       125 ~I~~QLl~aL~yLHs~gIVHrDLKP--------~NILl~~~g~~~~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE  193 (676)
T 3qa8_A          125 TLLSDISSALRYLHENRIIHRDLKP--------ENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPE  193 (676)
T ss_dssp             HHHHHHHHHHHHHHHTTBCCCCCCS--------TTEEEECCSSSCEEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSC
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCH--------HHeEeecCCCceeEEEccccccccccccc---ccccccCCcccCChH
Confidence            4567889999999999999999999        9999986654   8999999988765432   224456888999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH---------hhcccCCCCC---ccc-----CCCCCCh
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLEN---------ISHLHADDGE---FIY-----LPTPQTT  147 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~---------~~~~~~~~~~---~~~-----~~~~~~~  147 (188)
                      .+.+..++.++||||+|+++|+++  +|..||.+......+..         ........+.   ...     ......+
T Consensus       194 ~l~~~~~s~ksDIwSLGviLyeLl--tG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls  271 (676)
T 3qa8_A          194 LLEQKKYTVTVDYWSFGTLAFECI--TGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILA  271 (676)
T ss_dssp             SSCCSCCSTTHHHHHHHHHHHHHH--SSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGH
T ss_pred             HhccCCCCchhHHHHHHHHHHHHH--HCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhh
Confidence            999888999999999999999999  67789876533221100         0000000000   000     0112357


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                      ..+.+++.+||..||++||++.++  |+||+.+.
T Consensus       272 ~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          272 GKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             HHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             HHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence            889999999999999999999997  66666543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=2e-26  Score=171.47  Aligned_cols=142  Identities=18%  Similarity=0.278  Sum_probs=102.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+++.|+.|+|++||+|+||||        +||+++.   ++.+||+|||++....                     
T Consensus       121 ~i~~qi~~~l~~lH~~~i~H~dlkp--------~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------  171 (299)
T 3m2w_A          121 EIMKSIGEAIQYLHSINIAHRDVKP--------ENLLYTSKRPNAILKLTDFGFAKETT---------------------  171 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEESSSSTTCCEEECCCTTCEECT---------------------
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCH--------HHEEEecCCCCCcEEEeccccccccc---------------------
Confidence            4677889999999999999999999        9999998   7889999999875432                     


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC-CcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG-EFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                         +..++.++||||+|+++|+++  +|..||.+.................. ..........+.++.+++.+||..||+
T Consensus       172 ---~~~~~~~~DiwslG~il~el~--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  246 (299)
T 3m2w_A          172 ---GEKYDKSCDMWSLGVIMYILL--CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT  246 (299)
T ss_dssp             ---TCGGGGHHHHHHHHHHHHHHH--HSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTT
T ss_pred             ---cccCCchhhHHHHHHHHHHHH--HCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChh
Confidence               133567899999999999999  46789977654433222111110000 000001145688999999999999999


Q ss_pred             CCCCHHHH--HHHHHhccCCCC
Q psy4332         164 ERPSFTEI--HLFLQRKNLGYV  183 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~~~~~~  183 (188)
                      +|||+.|+  |+||++......
T Consensus       247 ~Rps~~e~l~hp~~~~~~~~~~  268 (299)
T 3m2w_A          247 QRMTITEFMNHPWIMQSTKVPQ  268 (299)
T ss_dssp             TSCCHHHHHTSHHHHTGGGSCC
T ss_pred             hCCCHHHHhcChhhcccccCCC
Confidence            99999999  889987755433

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.91  E-value=4.8e-25  Score=180.52  Aligned_cols=135  Identities=18%  Similarity=0.089  Sum_probs=102.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.++.|+|++||+|+||||        +||+++.+ .+||+|||+++.....      ....||+.|+|||++.
T Consensus       186 ~~~~qi~~aL~~lH~~giiHrDlkp--------~NIll~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~  250 (681)
T 2pzi_A          186 AYLLEILPALSYLHSIGLVYNDLKP--------ENIMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVR  250 (681)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHH
T ss_pred             HHHHHHHHHHHHHHHCCCeecccCh--------HHeEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHc
Confidence            4567889999999999999999999        99999886 8999999998766432      3456889999999997


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +. .+.++||||||+++++++  .+..||.+....        .     .....+....+..+.+++.+||+.||++||+
T Consensus       251 ~~-~~~~sDi~slG~~l~~l~--~g~~~~~~~~~~--------~-----~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~  314 (681)
T 2pzi_A          251 TG-PTVATDIYTVGRTLAALT--LDLPTRNGRYVD--------G-----LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFT  314 (681)
T ss_dssp             HC-SCHHHHHHHHHHHHHHHH--SCCCEETTEECS--------S-----CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCS
T ss_pred             CC-CCCceehhhhHHHHHHHH--hCCCCCcccccc--------c-----ccccccccccCHHHHHHHhhhccCChhhCCC
Confidence            65 488999999999999999  556666542100        0     0000000112467899999999999999995


Q ss_pred             -HHHHHH
Q psy4332         168 -FTEIHL  173 (188)
Q Consensus       168 -~~el~~  173 (188)
                       ++++..
T Consensus       315 ~~~~l~~  321 (681)
T 2pzi_A          315 TAEEMSA  321 (681)
T ss_dssp             SHHHHHH
T ss_pred             HHHHHHH
Confidence             555533

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=1.2e-24  Score=161.15  Aligned_cols=133  Identities=15%  Similarity=0.074  Sum_probs=98.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++.++.+||++++.                      ++     
T Consensus       133 ~i~~ql~~aL~~lH~~givH~Dikp--------~NIll~~~g~~kl~~~~~----------------------~~-----  177 (286)
T 3uqc_A          133 RAMQSLAAAADAAHRAGVALSIDHP--------SRVRVSIDGDVVLAYPAT----------------------MP-----  177 (286)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSG--------GGEEEETTSCEEECSCCC----------------------CT-----
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCc--------ccEEEcCCCCEEEEeccc----------------------cC-----
Confidence            3567899999999999999999999        999999999999985432                      22     


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                        .++.++||||+|+++|+++  +|..||.+............................+.++.+++.+||+.||++| |
T Consensus       178 --~~~~~~Di~slG~il~ell--tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s  252 (286)
T 3uqc_A          178 --DANPQDDIRGIGASLYALL--VNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-S  252 (286)
T ss_dssp             --TCCHHHHHHHHHHHHHHHH--HSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-C
T ss_pred             --CCCchhHHHHHHHHHHHHH--HCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-C
Confidence              3678999999999999999  4678988765322110000000001111111224578899999999999999999 9


Q ss_pred             HHHHHHHHHhccC
Q psy4332         168 FTEIHLFLQRKNL  180 (188)
Q Consensus       168 ~~el~~~l~~~~~  180 (188)
                      +.|+.+.|+++..
T Consensus       253 ~~el~~~L~~~~~  265 (286)
T 3uqc_A          253 ASTLLNLMQQATA  265 (286)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999987654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.89  E-value=8e-25  Score=165.31  Aligned_cols=142  Identities=13%  Similarity=0.031  Sum_probs=100.4

Q ss_pred             ccccchhhhhhhhc-ccccccccchhhhhccccccceEEcCcc--------------------eEEEccCCCCccCCCCc
Q psy4332           8 PQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKF--------------------EIKISDFATDSDMFSSD   66 (188)
Q Consensus         8 ~~~~~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~--------------------~~kl~dfg~~~~~~~~~   66 (188)
                      .++.+|+.|+.|+| ++||+||||||        +|||++.++                    .+||+|||+++..... 
T Consensus       165 ~i~~qi~~aL~~lH~~~~ivHrDlKp--------~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-  235 (336)
T 2vuw_A          165 SILHQLTASLAVAEASLRFEHRDLHW--------GNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-  235 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBCSCCCG--------GGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-
T ss_pred             HHHHHHHHHHHHHHHhCCEeECCCCH--------HHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-
Confidence            45678999999999 99999999999        999998876                    8999999998765432 


Q ss_pred             cccccCCCCCCccccchhhhhcCCCCChhhHHHHHHH-HHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCC
Q psy4332          67 YYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVT-LWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTP  144 (188)
Q Consensus        67 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~-~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  144 (188)
                            ...||+.|+|||.+.+.. +.++||||++.+ .++++  .+..||.+... ......+................
T Consensus       236 ------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (336)
T 2vuw_A          236 ------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRW--GEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMK  306 (336)
T ss_dssp             ------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCT--TSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHH
T ss_pred             ------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccc--cccCCCcchhhhhHHHHhhhhhhccCcccchhhhh
Confidence                  235788899999998665 889999998776 56677  56677744211 11222222111111111111112


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHHH
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEIH  172 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el~  172 (188)
                      ..++++.+|+.+||+.|     |++|++
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hcCHHHHHHHHHHhccC-----CHHHHH
Confidence            35788999999999876     888886

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.77  E-value=4.9e-21  Score=153.70  Aligned_cols=94  Identities=13%  Similarity=0.010  Sum_probs=62.0

Q ss_pred             ccCCccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           4 LRHRPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         4 l~~~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      +....+..+|+.|+.|+|++||+||||||        +|||++.+|.+||+|||+++.......  ......||+.|++|
T Consensus       339 l~~~~I~~QIl~AL~ylH~~GIIHRDIKP--------eNILL~~dg~vKL~DFGlAr~~~~~~~--~~~t~vGTp~YmAP  408 (569)
T 4azs_A          339 IDREKILGSLLRSLAALEKQGFWHDDVRP--------WNVMVDARQHARLIDFGSIVTTPQDCS--WPTNLVQSFFVFVN  408 (569)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCEESCCCG--------GGEEECTTSCEEECCCTTEESCC---C--CSHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHCCceeccCch--------HhEEECCCCCEEEeecccCeeCCCCCc--cccCceechhhccH
Confidence            34445778999999999999999999999        999999999999999999887654321  22334589999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHH
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEIL  108 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~  108 (188)
                      |++.+ ....++|+|++|++.+++.
T Consensus       409 E~l~g-~~~~~~d~~s~g~~~~~l~  432 (569)
T 4azs_A          409 ELFAE-NKSWNGFWRSAPVHPFNLP  432 (569)
T ss_dssp             HHC------------------CCCC
T ss_pred             HHhCC-CCCCcccccccccchhhhc
Confidence            99974 4677899999999877654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.50  E-value=5.7e-16  Score=123.73  Aligned_cols=92  Identities=16%  Similarity=0.088  Sum_probs=74.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-----ccCCCCCCcccc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-----VHDNTSLPIRWM   81 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~   81 (188)
                      ..++.+++.++.|+|++||+||||||        +||+++.  .+||+|||+++.........     ......+|+.|+
T Consensus       434 ~~i~~qi~~aL~~LH~~gIiHrDiKp--------~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~  503 (540)
T 3en9_A          434 LDIAYKIGEIVGKLHKNDVIHNDLTT--------SNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEK  503 (540)
T ss_dssp             THHHHHHHHHHHHHHHTTEECTTCCT--------TSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCH--------HHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcC
Confidence            45678899999999999999999999        9999998  89999999998875432211     113456789999


Q ss_pred             chhhhhc--CCCCChhhHHHHHHHHHHHH
Q psy4332          82 AWESVRL--RKFTTKSDVWSFGVTLWEIL  108 (188)
Q Consensus        82 ~Pe~~~~--~~~~~~~di~slG~~~~~l~  108 (188)
                      |||++..  ..++..+|+|+..+-..+-.
T Consensus       504 APEv~~~~~~~Y~~~~d~ws~vl~~l~~v  532 (540)
T 3en9_A          504 FDEIWERFLEGYKSVYDRWEIILELMKDV  532 (540)
T ss_dssp             HHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9999986  45677789999887766655

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.20  E-value=2.5e-12  Score=94.78  Aligned_cols=56  Identities=20%  Similarity=0.092  Sum_probs=47.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.++.|+|++||+|+||||        +||+++ ++.+||+|||++....               .+.+||++.
T Consensus       197 ~i~~qi~~~l~~lH~~giiHrDlkp--------~NILl~-~~~vkl~DFG~a~~~~---------------~~~a~e~l~  252 (282)
T 1zar_A          197 EVLDMILEEVAKFYHRGIVHGDLSQ--------YNVLVS-EEGIWIIDFPQSVEVG---------------EEGWREILE  252 (282)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCST--------TSEEEE-TTEEEECCCTTCEETT---------------STTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCEeCCCCH--------HHEEEE-CCcEEEEECCCCeECC---------------CCCHHHHHH
Confidence            4567889999999999999999999        999999 9999999999975331               267888874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.85  E-value=7.9e-10  Score=80.31  Aligned_cols=46  Identities=9%  Similarity=0.051  Sum_probs=40.8

Q ss_pred             Cccccchhhhhhhhc-ccccccccchhhhhccccccceEEcCcceEEEccCCCCccC
Q psy4332           7 RPQASNLAVVPLLRN-KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDM   62 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh-~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~   62 (188)
                      ..++.+++.++.++| ++||+|+|+||        .||+++.  .++|+|||++...
T Consensus       173 ~~i~~qi~~~l~~lH~~~givHrDlkp--------~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          173 EGIFNDVVENVKRLYQEAELVHADLSE--------YNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTSCEECSSCST--------TSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHCCEEeCCCCH--------HHEEEcC--cEEEEECcccccC
Confidence            345678889999999 99999999999        9999988  8999999998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.26  E-value=2.3e-07  Score=70.97  Aligned_cols=45  Identities=20%  Similarity=0.214  Sum_probs=38.6

Q ss_pred             cccchhhhhhhhcccccccccchhhhhccccccceEEcCcc----------eEEEccCCCCcc
Q psy4332           9 QASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----------EIKISDFATDSD   61 (188)
Q Consensus         9 ~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----------~~kl~dfg~~~~   61 (188)
                      +..+++.++.++|++||+||||||        .|||++.++          .+.|+||+-+..
T Consensus       210 l~~qll~~l~~lH~~gIVHrDLKp--------~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          210 LYADLIALILRLAKHGLIHGDFNE--------FNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCST--------TSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHCCCcCCCCCH--------HHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            456788899999999999999999        999998876          489999996543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.63  E-value=0.00087  Score=47.82  Aligned_cols=31  Identities=16%  Similarity=-0.048  Sum_probs=26.0

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|++|        .||+++.++.+.|.||+.+.
T Consensus       183 ~~~l~HgDl~~--------~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          183 DLVVTHGDACL--------PNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CEEEECSSCCG--------GGEEEETTEEEEECCCTTCE
T ss_pred             CeEEECCCCCC--------CcEEEECCcEEEEEcchhcc
Confidence            34599999999        99999877667899999753

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.16  E-value=0.0017  Score=46.52  Aligned_cols=29  Identities=17%  Similarity=0.110  Sum_probs=25.1

Q ss_pred             cccccccchhhhhccccccceEEcCcceEEEccCCCC
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD   59 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~   59 (188)
                      .+++|+|+++        .||+++.+..+.|.||+.+
T Consensus       183 ~~l~HgDl~~--------~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          183 LVFSHGDLGD--------SNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEEECSSCCT--------TSEEEETTEEEEECCCTTC
T ss_pred             ceEECCCCCc--------CcEEEECCcEEEEEEchhc
Confidence            6799999999        9999987666689999865

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.81  E-value=0.0029  Score=46.51  Aligned_cols=32  Identities=16%  Similarity=0.145  Sum_probs=26.9

Q ss_pred             ccccccccchhhhhccccccceEEcC--cceEEEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGK--KFEIKISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~--~~~~kl~dfg~~~~   61 (188)
                      ...++|+|+++        .||+++.  ...+.+.||+.+..
T Consensus       190 ~~~~~HgD~~~--------~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          190 YPCLIHNDFSS--------DHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             CCEEECSCCCG--------GGEEEETTTTEEEEECCCTTCEE
T ss_pred             CceeEeCCCCc--------ccEEEeCCCCCEEEEEeCCCCcc
Confidence            36799999999        9999988  56679999998654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.38  E-value=0.0054  Score=46.13  Aligned_cols=31  Identities=10%  Similarity=0.174  Sum_probs=25.9

Q ss_pred             cccccccchhhhhccccccceEEcCcc--eEEEccCCCCcc
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLVGKKF--EIKISDFATDSD   61 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill~~~~--~~kl~dfg~~~~   61 (188)
                      .+++|+|+++        .||+++.++  .+.|.||+.+..
T Consensus       216 ~~lvHgD~~~--------~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRL--------DNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSG--------GGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCC--------CcEEEeCCCCcEEEEECcccccc
Confidence            6799999999        999998764  368999998653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=94.64  E-value=0.17  Score=35.50  Aligned_cols=54  Identities=13%  Similarity=0.071  Sum_probs=32.5

Q ss_pred             ccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhhcCCCCChhhHHHHHHHHHHHHh
Q psy4332          40 FKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFGVTLWEILN  109 (188)
Q Consensus        40 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t  109 (188)
                      ...|++..+|.+.+.+ ..+.              .....+.+||... ...+.+.-|||+|+++|..+.
T Consensus        78 ~~~i~l~~dG~V~f~~-~~s~--------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           78 AAQIRVWRDGAVTLAP-AADD--------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             GGGEEEETTSCEEECC-C--------------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             CcceEEecCCceeccc-cccc--------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            3788888888887764 2110              0111366777753 345678889999999999984

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.86  E-value=0.03  Score=41.44  Aligned_cols=31  Identities=26%  Similarity=0.308  Sum_probs=27.4

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+++        .||+++.++.+.+.||+.+.
T Consensus       221 ~~~l~HgD~~~--------~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGT--------GNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCST--------TSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCc--------ccEEEeCCCcEEEEehhhcc
Confidence            57899999999        99999877889999999753

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=93.76  E-value=0.034  Score=42.80  Aligned_cols=32  Identities=13%  Similarity=0.124  Sum_probs=27.9

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      +...++|+|+++        .||+++.++ +.+.||+.+..
T Consensus       230 ~~~~liHGDl~~--------~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHT--------GSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSG--------GGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCC--------CcEEEeCCC-CEEEeCccccc
Confidence            578999999999        999998776 99999988654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=92.86  E-value=0.055  Score=39.84  Aligned_cols=31  Identities=23%  Similarity=0.175  Sum_probs=26.3

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .||+++.+..+.+.||+.+.
T Consensus       186 ~~~liHgDl~~--------~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          186 PAGVIHADLFQ--------DNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             CEEEECSCCCG--------GGEEEETTEEEEECCCTTCE
T ss_pred             CcccCCCCCCc--------cCEEEeCCceEEEecchhcc
Confidence            46899999999        99999887666899998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=91.49  E-value=0.1  Score=37.26  Aligned_cols=31  Identities=16%  Similarity=0.117  Sum_probs=26.2

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ...++|+|+.+        .||+++..+.+-|.||+.+.
T Consensus       192 ~~~l~HGDl~~--------~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          192 DSVVTHGDFSL--------DNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             CEEEECSCCCT--------TSEEEETTEEEEECCCTTCE
T ss_pred             CcEEEcCCCCC--------CeEEEECCeEEEEEECcccc
Confidence            44689999999        99999988777899999754

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=91.26  E-value=0.11  Score=38.53  Aligned_cols=33  Identities=15%  Similarity=0.125  Sum_probs=27.2

Q ss_pred             cccccccccchhhhhccccccceEEcCc----ceEEEccCCCCcc
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKK----FEIKISDFATDSD   61 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~----~~~kl~dfg~~~~   61 (188)
                      +...++|+|+.+        .||+++.+    +.+.+.||+.+..
T Consensus       181 ~~~~lvHgD~~~--------~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          181 GDMVFVHRDFHA--------QNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             SCCEEECSCCSG--------GGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCCeeEeCCcCc--------ccEEeccCcCCCCCeEEEeCCCcCc
Confidence            357899999999        99999764    6789999997653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=91.03  E-value=0.11  Score=38.76  Aligned_cols=31  Identities=10%  Similarity=0.048  Sum_probs=26.1

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ...++|+|+.+        .||+++++..+.|.||+.+.
T Consensus       221 ~~~l~HgDl~~--------~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARV--------GNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSG--------GGEEEETTEEEEECCGGGCE
T ss_pred             CceEEeCCCCC--------CeEEEeCCcEEEEEcccccc
Confidence            56899999999        99999865557999998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.24  E-value=0.17  Score=37.07  Aligned_cols=33  Identities=18%  Similarity=0.184  Sum_probs=26.2

Q ss_pred             cccccccccchhhhhccccccceEEcC---cce-EEEccCCCCcc
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGK---KFE-IKISDFATDSD   61 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~---~~~-~kl~dfg~~~~   61 (188)
                      ....++|+|+++        .|++++.   ++. +.|.||+.+..
T Consensus       188 ~~~~~~HgD~~~--------~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          188 YTPRLIHGDLSP--------DHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CCCEEECSCCSG--------GGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CCCeeEeCCCCc--------ccEEEecCCCCCceEEEEehhhcCC
Confidence            456789999999        9999987   344 58999997543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=88.81  E-value=0.23  Score=36.51  Aligned_cols=30  Identities=13%  Similarity=-0.055  Sum_probs=25.0

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ....++|+|+++        .||+++ + .+.+.||+.+.
T Consensus       193 ~~~~l~HgD~~~--------~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          193 FTVLRLHGDCHA--------GNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             SCCEECCSSCSG--------GGEEES-S-SEEECCCTTCC
T ss_pred             CCeeeeeCCCCc--------ccEeEc-C-CCEEEECCCCC
Confidence            356789999999        999998 4 78999998754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=88.73  E-value=0.21  Score=37.23  Aligned_cols=32  Identities=31%  Similarity=0.313  Sum_probs=27.5

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ..+++|+|+.+        .||+++.++.+.+.||+.+..
T Consensus       205 ~~~~~HgD~~~--------~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHA--------GNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCG--------GGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCc--------CCEEEeCCCeEEEEECCCCee
Confidence            46799999999        999998878899999986543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=88.29  E-value=0.23  Score=37.30  Aligned_cols=30  Identities=20%  Similarity=0.319  Sum_probs=24.3

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .||+++.+. +.+.||..+.
T Consensus       211 ~~~l~HgDl~~--------~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQE--------NNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCG--------GGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCc--------ccEEecCCc-EEEEEecCCC
Confidence            46799999999        999987654 8999998754

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=88.09  E-value=0.29  Score=37.18  Aligned_cols=32  Identities=16%  Similarity=0.151  Sum_probs=26.1

Q ss_pred             cccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          21 NKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        21 h~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      +...++|+|+.+        .||+++.+ .+++.||..+..
T Consensus       225 ~~~~L~HGDl~~--------~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          225 SAETLIHGDLHT--------GSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             BCCEEECSCCSG--------GGEEECSS-CEEECCCTTCEE
T ss_pred             CCCceeeCCCCc--------CcEEEeCC-CeEEEeCccccc
Confidence            367899999999        99998766 488999987543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=85.76  E-value=0.3  Score=37.78  Aligned_cols=19  Identities=26%  Similarity=0.280  Sum_probs=15.2

Q ss_pred             ccccccccchhhhhccccccceEEcCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKK   48 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~   48 (188)
                      ...++|+|+.+        .||+++.+
T Consensus       248 ~~v~~H~Dl~~--------gNiL~~~~  266 (429)
T 1nw1_A          248 PVTFCHNDLQE--------GNILLPKA  266 (429)
T ss_dssp             CEEEECSCCCG--------GGEEEEC-
T ss_pred             CeEEEeCCCCC--------CeEEeeCC
Confidence            45799999999        88888764

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=85.17  E-value=0.45  Score=37.17  Aligned_cols=17  Identities=18%  Similarity=0.061  Sum_probs=14.3

Q ss_pred             ccccccccchhhhhccccccceEEc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVG   46 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~   46 (188)
                      ...++|+|+.+        .||+++
T Consensus       289 ~~v~cHnDl~~--------gNIL~~  305 (458)
T 2qg7_A          289 PIVLCHCDLLS--------SNIINT  305 (458)
T ss_dssp             CEEEECSCCCG--------GGEEEC
T ss_pred             CeeEEecCCCC--------CcEEee
Confidence            45799999999        888776

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=84.90  E-value=0.46  Score=34.56  Aligned_cols=30  Identities=17%  Similarity=0.075  Sum_probs=24.3

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ...++|+|+.+        .|++ ..++.+.+.||..+.
T Consensus       172 ~~~l~HgDl~~--------~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          172 PLAACHCDPLC--------ENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             CCEEECSCCCG--------GGEE-ECSSCEEECCCTTCE
T ss_pred             CceeeccCCCc--------CCEE-ECCCCEEEEeccccc
Confidence            45689999999        9998 455678999998764

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=84.87  E-value=0.47  Score=36.08  Aligned_cols=31  Identities=19%  Similarity=0.213  Sum_probs=26.4

Q ss_pred             ccccccccchhhhhccccccceEEcCc----ceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKK----FEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~----~~~kl~dfg~~~   60 (188)
                      ...++|+|+.+        .||+++.+    +.+.+.||..+.
T Consensus       219 ~~~~~H~D~~~--------~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          219 PVVFCHNDIQE--------GNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             CEEEECSCCCG--------GGEEEESCC---CCEEECCCTTCE
T ss_pred             CcEEEcCCCCC--------CeEEEcCCCCccCcEEEEecccCC
Confidence            46899999999        99998876    678999998764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=80.92  E-value=0.89  Score=34.69  Aligned_cols=30  Identities=23%  Similarity=0.289  Sum_probs=23.7

Q ss_pred             cccccccchhhhhccccccceEE------cCcceEEEccCCCCc
Q psy4332          23 NGVEHSSLKKKCIKIFDFKNCLV------GKKFEIKISDFATDS   60 (188)
Q Consensus        23 ~~i~h~~lk~~~i~~~~~~nill------~~~~~~kl~dfg~~~   60 (188)
                      ..++|+|+.+        .||++      +....+.+.||.++.
T Consensus       244 ~vfcHnDl~~--------gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          244 VVFCHNDCQE--------GNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEEECSCCCG--------GGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeeEEecCCC--------CeEEEecCcccCcCCeEEEechHhcc
Confidence            3468999999        88888      345678999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	188
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-28
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-27
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-27
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-27
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-26
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-25
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-25
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-25
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-24
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-24
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-24
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-24
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-24
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-24
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-23
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-23
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-23
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-22
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-21
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-20
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-19
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-18
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	8e-17
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-16
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-15
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-14
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	0.001

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  106 bits (264), Expect = 1e-28
 Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 7/137 (5%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +NCLVG+   +KI+DF    +++S+DYY+   N ++PIRWM  ES+   ++TT+SDVW++
Sbjct: 169 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 228

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI +     PY G+   EV+  +      DG  +  P      ++ +LM  CW +
Sbjct: 229 GVVLWEIFSYGLQ-PYYGMAHEEVIYYVR-----DGNILACP-ENCPLELYNLMRLCWSK 281

Query: 161 SPTERPSFTEIHLFLQR 177
            P +RPSF  IH  LQR
Sbjct: 282 LPADRPSFCSIHRILQR 298

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (254), Expect = 2e-27
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 8/153 (5%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L  K I   D K  N  + +   +KI DF   +           +  S  I WMA E +R
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179

Query: 88  LRK---FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
           ++    ++ +SDV++FG+ L+E+  +    PY  + + + +  +        +   +   
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYEL--MTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR-S 236

Query: 145 QTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              K +  LM EC K+   ERP F +I   ++ 
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 3e-27
 Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 10/158 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           +++      D +  N LVG+    K++DF   + +   + Y        PI+W A E+  
Sbjct: 129 VERMNYVHRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIKWTAPEAAL 187

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             +FT KSDVWSFG+ L E+       PY G+ + EVL+ +     + G  +  P P+  
Sbjct: 188 YGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQV-----ERGYRMPCP-PECP 240

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPP 185
           + + DLM +CW++ P ERP+F  +  FL+       P 
Sbjct: 241 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 6e-27
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L+ + +   D    N LV     +KI+DF     + + +     +   +PI+WMA ES+ 
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            R +T +SDVWS+GVT+WE++      PY+G+   E+   +     + GE +  P P  T
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSK-PYDGIPASEISSIL-----EKGERLPQP-PICT 239

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
            D+  +M +CW      RP F E+ +   +
Sbjct: 240 IDVYMIMVKCWMIDADSRPKFRELIIEFSK 269

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 8e-26
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 10/144 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L+ K     D    NCLV  +  +K+SDF   S     D Y     +  P+RW   E + 
Sbjct: 116 LESKQFLHRDLAARNCLVNDQGVVKVSDFGL-SRYVLDDEYTSSVGSKFPVRWSPPEVLM 174

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             KF++KSD+W+FGV +WEI +L +  PYE  T+ E  E+I       G  +Y P    +
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKM-PYERFTNSETAEHI-----AQGLRLYRP-HLAS 227

Query: 148 KDILDLMNECWKRSPTERPSFTEI 171
           + +  +M  CW     ERP+F  +
Sbjct: 228 EKVYTIMYSCWHEKADERPTFKIL 251

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.9 bits (243), Expect = 2e-25
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTS--LPIRW 80
               H  L          +NC++ +KF +K++DF    DM+  ++  VH+ T   LP++W
Sbjct: 149 KKFVHRDLA--------ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 200

Query: 81  MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
           MA ES++ +KFTTKSDVWSFGV LWE++      PY  +   ++   +       G  + 
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTR-GAPPYPDVNTFDITVYLLQ-----GRRLL 254

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
            P       + ++M +CW      RPSF+E+   +  
Sbjct: 255 QP-EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 2e-25
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 10/150 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L++ C+   D    NCLVG+   IK+SDF         D Y     T  P++W + E   
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFS 175

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
             ++++KSDVWSFGV +WE+ +     PYE  ++ EV+E+IS      G  +Y P    +
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSE-GKIPYENRSNSEVVEDIST-----GFRLYKP-RLAS 228

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
             +  +MN CWK  P +RP+F+ +   L  
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQLAE 258

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.7 bits (240), Expect = 3e-25
 Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 10/153 (6%)

Query: 27  HSSLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE 84
              L+KK     D    NCLVG+   +K++DF   S + + D Y  H     PI+W A E
Sbjct: 128 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIKWTAPE 186

Query: 85  SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
           S+   KF+ KSDVW+FGV LWEI       PY G+   +V E +      + ++      
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYELL------EKDYRMERPE 239

Query: 145 QTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
              + + +LM  CW+ +P++RPSF EIH   + 
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 1e-24
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 15/157 (9%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRW 80
                H  L          +N L+  +  +KI DF     +  + D+Y + ++  +P  W
Sbjct: 129 SKRFIHRDLA--------ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180

Query: 81  MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
            A ES++ R F+  SD W FGVTLWE+    +  P+ GL   ++L  I     D      
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKI-----DKEGERL 234

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
                  +DI ++M +CW   P +RP+F  +  FL  
Sbjct: 235 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 2e-24
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 10/150 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSS-DYYRVHDNTSLPIRWMAWESV 86
           L++      D    N L+  +   KISDF     + +  +YY+   +   P++W A E +
Sbjct: 123 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
              KF++KSDVWSFGV +WE  +    +PY G+   EV   +     + GE +  P    
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSY-GQKPYRGMKGSEVTAML-----EKGERMGCP-AGC 235

Query: 147 TKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
            +++ DLMN CW      RP F  + L L+
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 2e-24
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L+       D    N LV +    K+SDF       + +     D   LP++W A E++R
Sbjct: 119 LEGNNFVHRDLAARNVLVSEDNVAKVSDFG-----LTKEASSTQDTGKLPVKWTAPEALR 173

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            +KF+TKSDVWSFG+ LWEI +  R  PY  +   +V+  +     + G  +  P     
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRV-PYPRIPLKDVVPRV-----EKGYKMDAP-DGCP 226

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
             + ++M  CW      RPSF ++   L+ 
Sbjct: 227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 4e-24
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 10/149 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           ++++     D +  N LV      KI+DF   + +   + Y   +    PI+W A E++ 
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIKWTAPEAIN 183

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
              FT KSDVWSFG+ L EI+   R  PY G+T+ EV++N+     + G  +  P     
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRI-PYPGMTNPEVIQNL-----ERGYRMVRP-DNCP 236

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQ 176
           +++  LM  CWK  P +RP+F  +   L+
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.4 bits (231), Expect = 5e-24
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 32  KKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFS-SDYYRVHDNTSLPIRWMAWESVRL 88
                  D    N LV      K+SDF     +    +         +PIRW A E++  
Sbjct: 128 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 187

Query: 89  RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTK 148
           RKFT+ SDVWSFG+ +WE++     RPY  L++ EV++ I     +DG  +  P      
Sbjct: 188 RKFTSASDVWSFGIVMWEVMTY-GERPYWELSNHEVMKAI-----NDGFRLPTP-MDCPS 240

Query: 149 DILDLMNECWKRSPTERPSFTEIHLFLQR 177
            I  LM +CW++    RP F +I   L +
Sbjct: 241 AIYQLMMQCWQQERARRPKFADIVSILDK 269

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 6e-24
 Identities = 54/150 (36%), Positives = 76/150 (50%), Gaps = 10/150 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L+ K     D    N LV     +K+ DF     M  S YY+      LPI+WMA ES+ 
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLPIKWMAPESIN 182

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            R+FT+ SDVW FGV +WEIL      P++G+ + +V+  I +     GE + +P P   
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVK-PFQGVKNNDVIGRIEN-----GERLPMP-PNCP 235

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
             +  LM +CW   P+ RP FTE+   L  
Sbjct: 236 PTLYSLMTKCWAYDPSRRPRFTELKAQLST 265

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.3 bits (231), Expect = 6e-24
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 12/153 (7%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTS---LPIRWMAWE 84
           L        D    N LV      K+SDF     +        + +     +PIRW A E
Sbjct: 144 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 203

Query: 85  SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTP 144
           +++ RKFT+ SDVWS+G+ +WE+++    RPY  +T+ +V+  I        ++   P  
Sbjct: 204 AIQYRKFTSASDVWSYGIVMWEVMSYGE-RPYWDMTNQDVINAIEQ------DYRLPPPM 256

Query: 145 QTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
                +  LM +CW++    RP F +I   L +
Sbjct: 257 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 289

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.0 bits (230), Expect = 9e-24
 Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 41  KNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSF 100
           +N LV +   +KI+DF    D+   DYY+   N  LP++WMA E++  R +T +SDVWSF
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223

Query: 101 GVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR 160
           GV LWEI  L    PY G+   E+ + +      +G  +  P    T ++  +M +CW  
Sbjct: 224 GVLLWEIFTL-GGSPYPGVPVEELFKLL-----KEGHRMDKP-SNCTNELYMMMRDCWHA 276

Query: 161 SPTERPSFTEIHLFLQR 177
            P++RP+F ++   L R
Sbjct: 277 VPSQRPTFKQLVEDLDR 293

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 1e-23
 Identities = 48/140 (34%), Positives = 65/140 (46%), Gaps = 8/140 (5%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           D    N LV     +KI DF    D+ S   Y V  N  LP++WMA ES+    +T KSD
Sbjct: 189 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 248

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           VWS+G+ LWEI +L  + PY G+        +         F        T++I  +M  
Sbjct: 249 VWSYGILLWEIFSLGVN-PYPGIPVDANFYKLI-----QNGFKMDQPFYATEEIYIIMQS 302

Query: 157 CWKRSPTERPSFTEIHLFLQ 176
           CW     +RPSF  +  FL 
Sbjct: 303 CWAFDSRKRPSFPNLTSFLG 322

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.7 bits (227), Expect = 2e-23
 Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 10/150 (6%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNT-SLPIRWMAWESV 86
           L++K     D    N L+  +   KISDF     + + D Y    +    P++W A E +
Sbjct: 125 LEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 184

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
             RKF+++SDVWS+GVT+WE L+  +  PY+ +   EV+  I     + G+ +  P P+ 
Sbjct: 185 NFRKFSSRSDVWSYGVTMWEALSYGQK-PYKKMKGPEVMAFI-----EQGKRMECP-PEC 237

Query: 147 TKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
             ++  LM++CW     +RP F  +   ++
Sbjct: 238 PPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 3e-23
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L  +     D    N L+ +K  +KI DF    D++    Y    +  LP++WMA E++ 
Sbjct: 150 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 209

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            R +T +SDVWSFGV LWEI +L    PY G+   E           +G  +  P   TT
Sbjct: 210 DRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKIDEEFCRR----LKEGTRMRAP-DYTT 263

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
            ++   M +CW   P++RP+F+E+   L  
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 2e-22
 Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L +K     D    N LVG+ +  KI+DF         + Y       LP+RWMA ES+ 
Sbjct: 143 LSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKKTMGRLPVRWMAIESLN 199

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
              +TT SDVWS+GV LWEI++L    PY G+T  E+ E +       G  +  P     
Sbjct: 200 YSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEKL-----PQGYRLEKP-LNCD 252

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQR 177
            ++ DLM +CW+  P ERPSF +I + L R
Sbjct: 253 DEVYDLMRQCWREKPYERPSFAQILVSLNR 282

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 3e-22
 Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 15/169 (8%)

Query: 23  NGVEHSSLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
             +E   L    +   D K  N L+G    +K++DF   + +      R     +    W
Sbjct: 127 QALEF--LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP--YW 182

Query: 81  MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
           MA E V  + +  K D+WS G+   E+  +    PY     L  L  I+     +G    
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLRALYLIAT----NGTPEL 236

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR-KNLGYVPPM 186
               + +    D +N C      +R S  E+  H FL+  K L  + P+
Sbjct: 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPL 285

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.8 bits (219), Expect = 4e-22
 Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 9/151 (5%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L        D    NC+V + F +KI DF    D++ +DYYR      LP+RWM+ ES++
Sbjct: 149 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 208

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
              FTT SDVWSFGV LWEI  LA   PY+GL++ +VL  +      +G  +  P     
Sbjct: 209 DGVFTTYSDVWSFGVVLWEIATLAEQ-PYQGLSNEQVLRFV-----MEGGLLDKP-DNCP 261

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQRK 178
             + +LM  CW+ +P  RPSF EI   ++ +
Sbjct: 262 DMLFELMRMCWQYNPKMRPSFLEIISSIKEE 292

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.1 bits (218), Expect = 8e-22
 Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 22/164 (13%)

Query: 23  NGVEHSSLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
            G+ +  L    +   D K  N L+ +   +K+ DF + S M  ++ +           W
Sbjct: 126 QGLAY--LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG------TPYW 177

Query: 81  MAWESVRL---RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGE 137
           MA E +      ++  K DVWS G+T  E+    R  P   +  +  L +I+       E
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQ-----NE 230

Query: 138 FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN 179
              L +   ++   + ++ C ++ P +RP+   +  H F+ R+ 
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 1e-21
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 14/141 (9%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           D K  N  +  K  +K+ DF   + + + D          P  +M+ E +    +  KSD
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGL-ARILNHDTSFAKAFVGTP-YYMSPEQMNRMSYNEKSD 196

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           +WS G  L+E+   A   P+   +  E+   I       G+F  +P  + + ++ +++  
Sbjct: 197 IWSLGCLLYEL--CALMPPFTAFSQKELAGKIRE-----GKFRRIP-YRYSDELNEIITR 248

Query: 157 CWKRSPTERPSFTEI--HLFL 175
                   RPS  EI  +  +
Sbjct: 249 MLNLKDYHRPSVEEILENPLI 269

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 1e-21
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 17/145 (11%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           D K  N L+G   E+KI+DF       SS    +       + ++  E +  R    K D
Sbjct: 131 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG----TLDYLPPEMIEGRMHDEKVD 186

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
           +WS GV  +E   L    P+E  T  E  + IS +     +F+       T+   DL++ 
Sbjct: 187 LWSLGVLCYEF--LVGKPPFEANTYQETYKRISRVEFTFPDFV-------TEGARDLISR 237

Query: 157 CWKRSPTERPSFTEI--HLFLQRKN 179
             K +P++RP   E+  H ++   +
Sbjct: 238 LLKHNPSQRPMLREVLEHPWITANS 262

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 84.0 bits (207), Expect = 1e-20
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 18/161 (11%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL---PI 78
           K  + H  LK         +N L+     IK++DF     +   +  R    T     P 
Sbjct: 128 KLNIVHRDLK--------PENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 179

Query: 79  RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF 138
                 +     +  + D+WS GV ++ +  LA   P+     + +L  I      + +F
Sbjct: 180 IIECSMNDNHPGYGKEVDMWSTGVIMYTL--LAGSPPFWHRKQMLMLRMIMS---GNYQF 234

Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
                   +  + DL++      P +R +  E   H F Q+
Sbjct: 235 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 2e-20
 Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 25/164 (15%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
            N + H  LK          N L     +IK++DF   S   +    R       P  WM
Sbjct: 128 DNKIIHRDLK--------AGNILFTLDGDIKLADFGV-SAKNTRTIQRRDSFIGTP-YWM 177

Query: 82  AWESVRL-----RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG 136
           A E V       R +  K+DVWS G+TL E+       P+  L  + VL  I+       
Sbjct: 178 APEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEPPHHELNPMRVLLKIAK-----S 230

Query: 137 EFIYLPTP-QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
           E   L  P + + +  D + +C +++   R + +++  H F+  
Sbjct: 231 EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 84.0 bits (207), Expect = 3e-20
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 16/161 (9%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
           +N   H  LK + I     ++       E+K+ DF         D  +    T+    + 
Sbjct: 142 ENNYVHLDLKPENIMFTTKRSN------ELKLIDF---GLTAHLDPKQSVKVTTGTAEFA 192

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL 141
           A E    +     +D+WS GV  + +  L+   P+ G  D E L N+      D      
Sbjct: 193 APEVAEGKPVGYYTDMWSVGVLSYIL--LSGLSPFGGENDDETLRNVKSC---DWNMDDS 247

Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL 180
                ++D  D + +     P  R +  +   H +L   N 
Sbjct: 248 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 5e-20
 Identities = 28/159 (17%), Positives = 67/159 (42%), Gaps = 16/159 (10%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
            + + H  ++ + I     ++        IKI +F     +   D +R+         + 
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSS------TIKIIEFGQARQLKPGDNFRLLFTA---PEYY 170

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL 141
           A E  +    +T +D+WS G  ++ +  L+   P+   T+ +++ENI +    +  F   
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVL--LSGINPFLAETNQQIIENIMN---AEYTFDEE 225

Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK 178
              + + + +D ++    +    R + +E   H +L++K
Sbjct: 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (199), Expect = 3e-19
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 23  NGVEHSSLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
            G+    L  K     D    N L+      KI DF    D+ +   Y V  N  LP++W
Sbjct: 156 KGMAF--LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW 213

Query: 81  MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
           MA ES+    +T +SDVWS+G+ LWE+ +L    PY G+        +         F  
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSL-GSSPYPGMPVDSKFYKMI-----KEGFRM 267

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
           L       ++ D+M  CW   P +RP+F +I   +++
Sbjct: 268 LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 3e-19
 Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L  K I   D K  N L+ +   I+I+DF T   +         ++     ++++ E + 
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 183

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            +     SD+W+ G  ++++  +A   P+    +  + + I  L        Y    +  
Sbjct: 184 EKSACKSSDLWALGCIIYQL--VAGLPPFRAGNEYLIFQKIIKLE-------YDFPEKFF 234

Query: 148 KDILDLMNECWKRSPTERPSFTEIHLFLQRKN 179
               DL+ +      T+R    E+  +   K 
Sbjct: 235 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 79.7 bits (196), Expect = 1e-18
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 16/169 (9%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
           ++ + H  +K + I     K         +KI DF   + +   +  +V   T     + 
Sbjct: 145 EHSIVHLDIKPENIMCETKKAS------SVKIIDFGLATKLNPDEIVKVTTAT---AEFA 195

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL 141
           A E V        +D+W+ GV  + +  L+   P+ G  DLE L+N+      D EF   
Sbjct: 196 APEIVDREPVGFYTDMWAIGVLGYVL--LSGLSPFAGEDDLETLQNVKRC---DWEFDED 250

Query: 142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPPMNS 188
                + +  D +    ++ P +R +  +   H +L+  +      + S
Sbjct: 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPS 299

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 2e-18
 Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 16/158 (10%)

Query: 24  GVEHSSLKKKCIKIFDFK--NCLV-GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
           G++    +   I   D K  N  + G    +KI D    + +  + + +    T     +
Sbjct: 124 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL-ATLKRASFAKAVIGT---PEF 179

Query: 81  MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
           MA E     K+    DV++FG+ + E+       PY    +   +    +     G    
Sbjct: 180 MAPEMYE-EKYDESVDVYAFGMCMLEM--ATSEYPYSECQNAAQI----YRRVTSGVKPA 232

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
                   ++ +++  C +++  ER S  ++  H F Q
Sbjct: 233 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 2e-18
 Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 16/156 (10%)

Query: 32  KKCIKIFDF--KNCLV----GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES 85
              I  FD   +N ++      K  IKI DF     +   + ++    T     ++A E 
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT---PEFVAPEI 187

Query: 86  VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQ 145
           V       ++D+WS GV  + +  L+   P+ G T  E L N+S +   + EF       
Sbjct: 188 VNYEPLGLEADMWSIGVITYIL--LSGASPFLGDTKQETLANVSAV---NYEFEDEYFSN 242

Query: 146 TTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN 179
           T+    D +     + P +R +  +   H +++ K+
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 3e-18
 Identities = 28/144 (19%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKF-TTKS 95
           D K  N L+ ++  +KISDF   +    ++  R+ +     + ++A E ++ R+F     
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187

Query: 96  DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMN 155
           DVWS G+ L  +L           +  E  +        + +    P  +     L L++
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK------EKKTYLNPWKKIDSAPLALLH 241

Query: 156 ECWKRSPTERPSFTEI--HLFLQR 177
           +    +P+ R +  +I    +  +
Sbjct: 242 KILVENPSARITIPDIKKDRWYNK 265

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 1e-17
 Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 29/177 (16%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL--PIR 79
           K  + H  LK         KN LV K     I+D        S+               R
Sbjct: 126 KPAIAHRDLK--------SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177

Query: 80  WMAWE------SVRLRKFTTKSDVWSFGVTLWEIL--------NLARHRPYEGLTDLE-V 124
           +MA E      +++  +   ++D+++ G+  WEI         +     PY  L   +  
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237

Query: 125 LENISHLHADDGEFIYLP----TPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR 177
           +E +  +  +      +P    + +  + +  +M ECW  +   R +   I   L +
Sbjct: 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 2e-17
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 53/200 (26%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           LR K+ + H  +K          N LV  + EIK+ DF   S             T    
Sbjct: 120 LREKHKIMHRDVK--------PSNILVNSRGEIKLCDFGV-SGQLIDSMANSFVGT---R 167

Query: 79  RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHL------- 131
            +M+ E ++   ++ +SD+WS G++L E+       P       E+              
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGRYPIPPPDAKELELMFGCQVEGDAAE 225

Query: 132 ------------------------------HADDGEFIYLPTPQTTKDILDLMNECWKRS 161
                                         +  +     LP+   + +  D +N+C  ++
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285

Query: 162 PTERPSFTEI--HLFLQRKN 179
           P ER    ++  H F++R +
Sbjct: 286 PAERADLKQLMVHAFIKRSD 305

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 5e-17
 Identities = 28/159 (17%), Positives = 64/159 (40%), Gaps = 13/159 (8%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
              + H  +K + +     +   +     +K++DF    +  S +       T     ++
Sbjct: 129 SINIAHRDVKPENLLYTSKRPNAI-----LKLTDFGFAKETTSHNSLTTPCYT---PYYV 180

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI-SHLHADDGEFIY 140
           A E +   K+    D+WS GV ++ +  L  + P+     L +   + + +     EF  
Sbjct: 181 APEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 238

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
               + ++++  L+    K  PT+R + TE   H ++ +
Sbjct: 239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 277

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.0 bits (181), Expect = 8e-17
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 8/141 (5%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSL-PIRWMAWESV 86
             +  I   D K  N ++     +K+ DF     +  S          +   ++++ E  
Sbjct: 127 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 186

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQT 146
           R      +SDV+S G  L+E+  L    P+ G + + V         +D           
Sbjct: 187 RGDSVDARSDVYSLGCVLYEV--LTGEPPFTGDSPVSVAYQHVR---EDPIPPSARHEGL 241

Query: 147 TKDILDLMNECWKRSPTERPS 167
           + D+  ++ +   ++P  R  
Sbjct: 242 SADLDAVVLKALAKNPENRYQ 262

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.0 bits (176), Expect = 6e-16
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 16/140 (11%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L  K I   D K  N L+ K   IKI+DF     +    Y            ++A E V 
Sbjct: 120 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG-----TPDYIAPEVVS 174

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
            + +    D WSFG+ ++E+  LA + P+     ++  E I +             P   
Sbjct: 175 TKPYNKSIDWWSFGILIYEM--LAGYTPFYDSNTMKTYEKILNAE-------LRFPPFFN 225

Query: 148 KDILDLMNECWKRSPTERPS 167
           +D+ DL++    R  ++R  
Sbjct: 226 EDVKDLLSRLITRDLSQRLG 245

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.8 bits (173), Expect = 1e-15
 Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 10/137 (7%)

Query: 42  NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSDVWSFG 101
              + +  +I ISDF                 T     ++A E +  + ++   D WS G
Sbjct: 140 YYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT---PGYVAPEVLAQKPYSKAVDCWSIG 196

Query: 102 VTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS 161
           V  + +  L  + P+    D ++ E I      + EF        +    D +    ++ 
Sbjct: 197 VIAYIL--LCGYPPFYDENDAKLFEQILK---AEYEFDSPYWDDISDSAKDFIRHLMEKD 251

Query: 162 PTERPSFTEI--HLFLQ 176
           P +R +  +   H ++ 
Sbjct: 252 PEKRFTCEQALQHPWIA 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.3 bits (171), Expect = 2e-15
 Identities = 19/156 (12%), Positives = 48/156 (30%), Gaps = 3/156 (1%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
                H  +K     +   K   +    +  ++    D+       YR + N +   R+ 
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF-IY 140
           +  +    + + + D+ S G  L          P++GL      +    +        I 
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYF--NLGSLPWQGLKAATKRQKYERISEKKMSTPIE 238

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQ 176
           +       +    +N C      ++P ++ +    +
Sbjct: 239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 274

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 2e-15
 Identities = 33/148 (22%), Positives = 57/148 (38%), Gaps = 11/148 (7%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
            G++    K    +     N L+ K   IKI+DF    +    D     +       ++A
Sbjct: 114 LGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIA 171

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP 142
            E +  +K+    D WSFGV L+E+  L    P+ G  + E+  +I   +          
Sbjct: 172 PEILLGQKYNHSVDWWSFGVLLYEM--LIGQSPFHGQDEEELFHSIRMDN-------PFY 222

Query: 143 TPQTTKDILDLMNECWKRSPTERPSFTE 170
                K+  DL+ + + R P +R     
Sbjct: 223 PRWLEKEAKDLLVKLFVREPEKRLGVRG 250

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 67.1 bits (163), Expect = 2e-14
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 7/166 (4%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVG--KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIR 79
           +  + +  +K     I    +         +  +  F  D        YR   N S   R
Sbjct: 119 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR 178

Query: 80  WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLH-ADDGEF 138
           +M+  +   R+ + + D+ + G        L    P++GL      +    +        
Sbjct: 179 YMSINTHLGREQSRRDDLEALGHVFMYF--LRGSLPWQGLKAATNKQKYERIGEKKQSTP 236

Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQR--KNLGY 182
           +        ++    M+     +    P +  +     +  + L  
Sbjct: 237 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 282

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 7e-14
 Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 32/166 (19%)

Query: 41  KNCLVGKKFEIKISDF--ATDSDMFSSDYYRVHDNTSLPIRWMAWESVR-LRKFTTKSDV 97
            N L+ +   +K++DF  A    +  +     + N  + + +   E +   R +    D+
Sbjct: 146 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDL 205

Query: 98  WSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY----------------- 140
           W  G  + E+    R    +G T+   L  IS L       ++                 
Sbjct: 206 WGAGCIMAEM--WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG 263

Query: 141 --------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
                   L         LDL+++     P +R    +   H F  
Sbjct: 264 QKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 9e-14
 Identities = 32/183 (17%), Positives = 54/183 (29%), Gaps = 28/183 (15%)

Query: 29  SLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV 86
            L +  I   D K  N L+ +   +K++DF   +  F S                     
Sbjct: 115 YLHQHWILHRDLKPNNLLLDENGVLKLADF-GLAKSFGSPNRAYTHQVVTRWYRAPELLF 173

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT--- 143
             R +    D+W+ G  L E+L   R     G +DL+ L  I        E  +      
Sbjct: 174 GARMYGVGVDMWAVGCILAELL--LRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 231

Query: 144 ------------------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYV 183
                                  D+LDL+   +  +P  R + T+     +   +     
Sbjct: 232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP 291

Query: 184 PPM 186
              
Sbjct: 292 GCQ 294

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 2e-13
 Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 31/178 (17%)

Query: 23  NGVEHSSLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW 80
            G++   L    +   D K  N LV    +IK++DF                 T   + +
Sbjct: 127 RGLDF--LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT---LWY 181

Query: 81  MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI------------ 128
            A E +    + T  D+WS G    E+    R   + G +D++ L  I            
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEM--FRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239

Query: 129 --------SHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
                      H+   + I        +   DL+ +C   +P +R S      H + Q
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 2e-12
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 13/138 (9%)

Query: 32  KKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLR 89
            + +   D K  N ++ K   IKI+DF    +  S          +    ++A E +   
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP--EYLAPEVLEDN 180

Query: 90  KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKD 149
            +    D W  GV ++E+  +    P+       + E I        E I  P    + +
Sbjct: 181 DYGRAVDWWGLGVVMYEM--MCGRLPFYNQDHERLFELILM------EEIRFP-RTLSPE 231

Query: 150 ILDLMNECWKRSPTERPS 167
              L+    K+ P +R  
Sbjct: 232 AKSLLAGLLKKDPKQRLG 249

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 4e-12
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 8/147 (5%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
             +EH        +    +N L+     + ++DF   S  F +D      +    I +MA
Sbjct: 140 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL-SKEFVADETERAYDFCGTIEYMA 198

Query: 83  WESVRL--RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
            + VR          D WS GV ++E+  L    P+    +      IS       +   
Sbjct: 199 PDIVRGGDSGHDKAVDWWSLGVLMYEL--LTGASPFTVDGEKNSQAEISRRIL---KSEP 253

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPS 167
               + +    DL+     + P +R  
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLG 280

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 35/179 (19%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
             G+ H  +K + +        L      +K+ DF +   +   +               
Sbjct: 140 SFGICHRDIKPQNL-------LLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRA 190

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHL---------- 131
                    +T+  DVWS G  L E+  L     + G + ++ L  I  +          
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248

Query: 132 ------------HADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
                             +  +  P+T  + + L +   + +PT R +  E   H F  
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 307

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 2e-11
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 32/182 (17%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
              + +   D K  N L+ +  E+K+++F   +  F                        
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG-LARAFGIPVRCYSAEVVTLWYRPPDVLFG 175

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY------- 140
            + ++T  D+WS G    E+ N      + G    + L+ I  L     E  +       
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANA-GRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234

Query: 141 ---------------LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYV 183
                             P+      DL+    K +P +R S  E   H +       + 
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS----DFC 290

Query: 184 PP 185
           PP
Sbjct: 291 PP 292

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 3e-11
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 31/174 (17%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
                +   D K  N L+  +  IK++DF            R + +  + + + A E + 
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILL 175

Query: 88  LRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT--- 143
             K ++T  D+WS G    E++   R   + G ++++ L  I        E ++      
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233

Query: 144 -------------------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
                              P   +D   L+++     P +R S      H F Q
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 23/158 (14%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLV-GKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
             V H        +    +N L+   + E+K+ DF +   +     Y   D T     + 
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS-GALLKDTVYTDFDGT---RVYS 176

Query: 82  AWESVRLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
             E +R  ++  +S  VWS G+ L++++      P+E   ++   +              
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQ-------------V 221

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
               + + +   L+  C    P++RP+F EI  H ++Q
Sbjct: 222 FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 15/147 (10%)

Query: 24  GVEHSSLKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
           G+EH  +  + +   D K  N L+ +   ++ISD     D      +           +M
Sbjct: 119 GLEH--MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG----THGYM 172

Query: 82  AWESVRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY 140
           A E ++    + + +D +S G  L+++  L  H P+      +  E          E   
Sbjct: 173 APEVLQKGVAYDSSADWFSLGCMLFKL--LRGHSPFRQHKTKDKHEIDRMTLTMAVEL-- 228

Query: 141 LPTPQTTKDILDLMNECWKRSPTERPS 167
                 + ++  L+    +R    R  
Sbjct: 229 --PDSFSPELRSLLEGLLQRDVNRRLG 253

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.0 bits (139), Expect = 5e-11
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 27/178 (15%)

Query: 23  NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA 82
           NG+ +   ++   +    +N L+ ++ E+KI+DF   +  F     +             
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARAFGIPVRKYTHEIVTLWYRAP 169

Query: 83  WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI-------------- 128
              +  +K++T  D+WS G    E++N      + G+++ + L  I              
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVN--GTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 129 -SHLHADDGEFIYLPT-------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQ 176
            + L   D  F                +  +DL+++  K  P +R +  +   H + +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 3e-10
 Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 32/178 (17%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRW-MAWESV 86
           +    +   D K  N L+    ++KI DF           +       +  RW  A E +
Sbjct: 125 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 184

Query: 87  RLRKFTTKS-DVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT-- 143
              K  TKS D+WS G  L E+L  +    + G   L+ L +I  +     +        
Sbjct: 185 LNSKGYTKSIDIWSVGCILAEML--SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 242

Query: 144 ----------------------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR 177
                                 P      LDL+++    +P +R    +   H +L++
Sbjct: 243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 16/130 (12%)

Query: 39  DFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVRLRKFTTKSD 96
           D K  N L+ ++  I+++DF      F+                +A E +  + +    D
Sbjct: 166 DLKPENLLIDQQGYIQVTDFG-----FAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD 220

Query: 97  VWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNE 156
            W+ GV ++E+   A + P+     +++ E I                  + D+ DL+  
Sbjct: 221 WWALGVLIYEM--AAGYPPFFADQPIQIYEKIVSGK-------VRFPSHFSSDLKDLLRN 271

Query: 157 CWKRSPTERP 166
             +   T+R 
Sbjct: 272 LLQVDLTKRF 281

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 46.8 bits (110), Expect = 4e-07
 Identities = 22/182 (12%), Positives = 53/182 (29%), Gaps = 38/182 (20%)

Query: 30  LKKKCIKIFDFK--NCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV 86
                I   D K  N ++  +  ++++ D+           Y V   +           V
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS--RYFKGPELLV 202

Query: 87  RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYL----- 141
             + +    D+WS G  L  ++   +   + G  + + L  I+ +   +  + Y+     
Sbjct: 203 DYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261

Query: 142 -------------------------PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLF 174
                                         + + LD +++  +     R +  E   H +
Sbjct: 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321

Query: 175 LQ 176
             
Sbjct: 322 FY 323

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 3e-06
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 34/185 (18%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           +    I   D K  N  V +  E+KI DF     +       +    +          + 
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDF----GLARHTDDEMTGYVATRWYRAPEIMLN 192

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPT---- 143
              +    D+WS G  + E+L       + G   ++ L+ I  L    G  +        
Sbjct: 193 WMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250

Query: 144 --------------------PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG 181
                                      +DL+ +       +R +  +   H +  + +  
Sbjct: 251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310

Query: 182 YVPPM 186
              P+
Sbjct: 311 DDEPV 315

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 3e-05
 Identities = 23/169 (13%), Positives = 57/169 (33%), Gaps = 21/169 (12%)

Query: 19  LRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPI 78
           +  + G+ H+ +K + + +            +IKI+D        +  Y   + N+    
Sbjct: 141 MHRRCGIIHTDIKPENVLME--IVDSPENLIQIKIADLGN-----ACWYDEHYTNSIQTR 193

Query: 79  RWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF 138
            + + E +    +   +D+WS    ++E+  +     +E        ++  H+       
Sbjct: 194 EYRSPEVLLGAPWGCGADIWSTACLIFEL--ITGDFLFEPDEGHSYTKDDDHIA------ 245

Query: 139 IYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNLGYVPPMN 187
                 Q  + + +L +   +     R  F    L      L + P  +
Sbjct: 246 ------QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 288

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 40/181 (22%)

Query: 22  KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWM 81
             G+ H  LK   +         V +  E+KI DF     +       +           
Sbjct: 139 AAGIIHRDLKPGNL--------AVNEDCELKILDF----GLARQADSEMTGYVVTRWYRA 186

Query: 82  AWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENI------------S 129
               +   ++T   D+WS G  + E++       ++G   L+ L+ I             
Sbjct: 187 PEVILNWMRYTQTVDIWSVGCIMAEMI--TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 244

Query: 130 HLHADDGEFIYLPTPQTTK------------DILDLMNECWKRSPTERPSFTEI--HLFL 175
            L +D+ +      P+  K              ++L+ +       +R +  E   H + 
Sbjct: 245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304

Query: 176 Q 176
           +
Sbjct: 305 E 305

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.001
 Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 44/186 (23%)

Query: 30  LKKKCIKIFDFK--NCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR 87
           L    I   D K  N +V     +KI DF       +S     +  T     + A E + 
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT---RYYRAPEVIL 191

Query: 88  LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTT 147
              +    D+WS G  + E+  +     + G   ++    +                 T 
Sbjct: 192 GMGYKENVDIWSVGCIMGEM--VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249

Query: 148 KDI-----------------------------------LDLMNECWKRSPTERPSFTEI- 171
           ++                                     DL+++     P +R S  +  
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309

Query: 172 -HLFLQ 176
            H ++ 
Sbjct: 310 QHPYIN 315

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	188
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.98
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.98
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.22
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.23
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.76
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	91.27
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	87.8
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	87.63

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-39  Score=235.47  Aligned_cols=164  Identities=23%  Similarity=0.325  Sum_probs=124.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||+++|+||||||        +|||++.++.+||+|||+++...............||+.|+|||++
T Consensus       107 ~~i~~qi~~gl~yLH~~~ivHrDlKp--------~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l  178 (276)
T d1uwha_         107 IDIARQTAQGMDYLHAKSIIHRDLKS--------NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI  178 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCEeccccCH--------HHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHH
Confidence            44678999999999999999999999        9999999999999999999876544333344566789999999999


Q ss_pred             hcC---CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          87 RLR---KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        87 ~~~---~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+.   .++.++|||||||++|||+|  |..||.+.................+. .......+++++.+++.+||+.||+
T Consensus       179 ~~~~~~~~~~~sDiwS~Gv~l~el~t--g~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~~li~~cl~~dp~  255 (276)
T d1uwha_         179 RMQDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPKAMKRLMAECLKKKRD  255 (276)
T ss_dssp             TTCSSCCCCHHHHHHHHHHHHHHHHH--SSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCHHHHHHHHHHTCSSGG
T ss_pred             hcccCCCCCchhhhhhhHHHHHHHHH--CCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchHHHHHHHHHHcCCCHh
Confidence            743   47889999999999999995  67899987655444333322111111 1222356788999999999999999


Q ss_pred             CCCCHHHHHHHHHhccCC
Q psy4332         164 ERPSFTEIHLFLQRKNLG  181 (188)
Q Consensus       164 ~Rps~~el~~~l~~~~~~  181 (188)
                      +|||++|+++.|+.+.+.
T Consensus       256 ~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         256 ERPLFPQILASIELLARS  273 (276)
T ss_dssp             GSCCHHHHHHHHHHHHHT
T ss_pred             HCcCHHHHHHHHHHHHHc
Confidence            999999999999888654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-38  Score=230.07  Aligned_cols=151  Identities=26%  Similarity=0.371  Sum_probs=128.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......    .....||+.|+|||++.
T Consensus       110 ~i~~qi~~al~~lH~~~ivHrDiKp--------~Nill~~~~~~kl~DFG~a~~~~~~~----~~~~~Gt~~Y~APE~~~  177 (263)
T d2j4za1         110 TYITELANALSYCHSKRVIHRDIKP--------ENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIE  177 (263)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEECCCCSCSCCCCCC----CEETTEEGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCeeeeeecc--------ccceecCCCCEeecccceeeecCCCc----ccccCCCCcccCHHHHc
Confidence            4577999999999999999999999        99999999999999999987664332    23456899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|+|+  +|..||.+....+....+.....       ..+...++++.+++.+||+.||++|||
T Consensus       178 ~~~~~~~~DiwSlGvilyell--~G~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dp~~R~t  248 (263)
T d2j4za1         178 GRMHDEKVDLWSLGVLCYEFL--VGKPPFEANTYQETYKRISRVEF-------TFPDFVTEGARDLISRLLKHNPSQRPM  248 (263)
T ss_dssp             TCCCCTTHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHTTCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhhhhhHhHHHHHHh--cCCCCCCCCCHHHHHHHHHcCCC-------CCCccCCHHHHHHHHHHccCCHhHCcC
Confidence            888999999999999999999  56789999888877777654321       112456889999999999999999999


Q ss_pred             HHHH--HHHHHhcc
Q psy4332         168 FTEI--HLFLQRKN  179 (188)
Q Consensus       168 ~~el--~~~l~~~~  179 (188)
                      ++|+  |+||++-.
T Consensus       249 ~~eil~hp~~~~~s  262 (263)
T d2j4za1         249 LREVLEHPWITANS  262 (263)
T ss_dssp             HHHHHTCHHHHHHC
T ss_pred             HHHHHcCcCcCCcC
Confidence            9999  78998643

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=234.30  Aligned_cols=154  Identities=18%  Similarity=0.271  Sum_probs=125.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++...............||+.|+|||++.
T Consensus       112 ~~~~qi~~al~ylH~~~iiHrDiKp--------~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~  183 (288)
T d1uu3a_         112 FYTAEIVSALEYLHGKGIIHRDLKP--------ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT  183 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHhhccccEEcCcCCc--------cccccCCCceEEecccccceecccCCcccccccccCCccccCceeec
Confidence            4567899999999999999999999        99999999999999999998775444333444567999999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|+|+  +|..||.+.+..+...++.....       .....+++++.+|+.+||+.||++|||
T Consensus       184 ~~~~~~~~DiwSlGvilyell--~g~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~~R~t  254 (288)
T d1uu3a_         184 EKSACKSSDLWALGCIIYQLV--AGLPPFRAGNEYLIFQKIIKLEY-------DFPEKFFPKARDLVEKLLVLDATKRLG  254 (288)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHTTCC-------CCCTTCCHHHHHHHHTTSCSSGGGSTT
T ss_pred             cCCCCcccceehhhHHHHHHh--hCCCCCCCcCHHHHHHHHHcCCC-------CCCccCCHHHHHHHHHHccCCHhHCcC
Confidence            889999999999999999999  56799999888888777764321       112457889999999999999999999


Q ss_pred             HHHH--------HHHHHhc
Q psy4332         168 FTEI--------HLFLQRK  178 (188)
Q Consensus       168 ~~el--------~~~l~~~  178 (188)
                      ++|+        |+||+.+
T Consensus       255 ~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         255 CEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             SGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHcCCHHHHcCCccCCC
Confidence            9985        5677654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-38  Score=232.15  Aligned_cols=156  Identities=31%  Similarity=0.527  Sum_probs=120.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|+++|+||||||        +|||++.++.+||+|||+++...............||+.|+|||.+.
T Consensus       138 ~~~~qi~~gl~ylH~~~ivHrDlKp--------~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  209 (299)
T d1ywna1         138 CYSFQVAKGMEFLASRKCIHRDLAA--------RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  209 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcCCcCCc--------cceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhh
Confidence            4567899999999999999999999        99999999999999999998765544433445567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHH-HHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVL-ENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      +..++.++||||+||++|||+|+ +..||.+....+.. ..+....     . .......++++.+++.+||+.||++||
T Consensus       210 ~~~~~~~sDiwS~Gvil~ellt~-~~~p~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~li~~cl~~dP~~Rp  282 (299)
T d1ywna1         210 DRVYTIQSDVWSFGVLLWEIFSL-GASPYPGVKIDEEFCRRLKEGT-----R-MRAPDYTTPEMYQTMLDCWHGEPSQRP  282 (299)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTT-SCCSSTTCCCSHHHHHHHHHTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCcccceeehHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhcCC-----C-CCCCccCCHHHHHHHHHHcCCChhHCc
Confidence            99999999999999999999963 46788776543333 3332221     1 112245678999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      |++|+++.|+++
T Consensus       283 t~~eil~~L~~i  294 (299)
T d1ywna1         283 TFSELVEHLGNL  294 (299)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999999888875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.7e-38  Score=232.08  Aligned_cols=158  Identities=35%  Similarity=0.690  Sum_probs=131.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|+++|+||||||        +|||++.++.+||+|||+++...............+++.|+|||.+
T Consensus       143 ~~i~~qi~~gl~ylH~~~ivHrDlKp--------~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~  214 (301)
T d1lufa_         143 LCIARQVAAGMAYLSERKFVHRDLAT--------RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  214 (301)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             HHHHHHHHHHhhhcccCCeEeeEEcc--------cceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHH
Confidence            45688999999999999999999999        9999999999999999998866554444444566788999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++|||||||++|||+++ +..||.+....+....+.....      ...+..++.++.+++.+||+.||++||
T Consensus       215 ~~~~~t~ksDVwS~Gvvl~ell~~-~~~p~~~~~~~e~~~~v~~~~~------~~~p~~~~~~~~~li~~cl~~~P~~RP  287 (301)
T d1lufa_         215 FYNRYTTESDVWAYGVVLWEIFSY-GLQPYYGMAHEEVIYYVRDGNI------LACPENCPLELYNLMRLCWSKLPADRP  287 (301)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTT-TCCTTTTSCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCCChhhhhccchhhHHHHHcc-CCCCCCCCCHHHHHHHHHcCCC------CCCCccchHHHHHHHHHHcCCChhHCc
Confidence            999999999999999999999953 3578998888887777654321      112245688999999999999999999


Q ss_pred             CHHHHHHHHHhcc
Q psy4332         167 SFTEIHLFLQRKN  179 (188)
Q Consensus       167 s~~el~~~l~~~~  179 (188)
                      |+.||+++|+++-
T Consensus       288 t~~ev~~~L~~i~  300 (301)
T d1lufa_         288 SFCSIHRILQRMC  300 (301)
T ss_dssp             CHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHhc
Confidence            9999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-38  Score=231.30  Aligned_cols=155  Identities=23%  Similarity=0.316  Sum_probs=128.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+
T Consensus       119 ~~i~~qi~~aL~yLH~~~iiHrDiKp--------~NILl~~~~~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~aPE~~  188 (293)
T d1yhwa1         119 AAVCRECLQALEFLHSNQVIHRDIKS--------DNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVV  188 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECCSTT--CCBCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCcccCCcH--------HHeEECCCCcEeeccchhheeecccc--ccccccccCCCccChhhh
Confidence            34677999999999999999999999        99999999999999999998765433  233456799999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+||++|+|+  +|..||.+.........+......    .......+++++.+++.+||+.||++||
T Consensus       189 ~~~~~~~~~DiwSlGvilyeml--tG~~Pf~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~li~~~L~~dP~~R~  262 (293)
T d1yhwa1         189 TRKAYGPKVDIWSLGIMAIEMI--EGEPPYLNENPLRALYLIATNGTP----ELQNPEKLSAIFRDFLNRCLDMDVEKRG  262 (293)
T ss_dssp             SSSCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHHCSC----CCSSGGGSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCCCCCchhceehHhHHHHHHh--hCCCCCCCCCHHHHHHHHHhCCCC----CCCCcccCCHHHHHHHHHHccCChhHCc
Confidence            9888999999999999999999  567999988876666555432211    1112245688999999999999999999


Q ss_pred             CHHHH--HHHHHh
Q psy4332         167 SFTEI--HLFLQR  177 (188)
Q Consensus       167 s~~el--~~~l~~  177 (188)
                      |++|+  |+||+.
T Consensus       263 s~~eil~Hp~~~~  275 (293)
T d1yhwa1         263 SAKELLQHQFLKI  275 (293)
T ss_dssp             CHHHHTTCGGGGG
T ss_pred             CHHHHhcCHhhCC
Confidence            99999  889974

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-38  Score=235.83  Aligned_cols=155  Identities=32%  Similarity=0.485  Sum_probs=126.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||+++|+||||||        +||+++.++.+||+|||+++...............+|+.|+|||.+.
T Consensus       168 ~i~~qi~~gl~yLH~~~IiHRDlKp--------~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~  239 (325)
T d1rjba_         168 CFAYQVAKGMEFLEFKSCVHRDLAA--------RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  239 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTEEETTCSG--------GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeeccCch--------hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc
Confidence            3677999999999999999999999        99999999999999999998765544333344556789999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|||||||++|||+| .|..||.+........++.....    . ...+...++++.+++.+||+.||++|||
T Consensus       240 ~~~~~~~~DiwS~Gvil~emlt-~g~~Pf~~~~~~~~~~~~~~~~~----~-~~~p~~~~~~l~~li~~cl~~dP~~RPt  313 (325)
T d1rjba_         240 EGIYTIKSDVWSYGILLWEIFS-LGVNPYPGIPVDANFYKLIQNGF----K-MDQPFYATEEIYIIMQSCWAFDSRKRPS  313 (325)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHTT-TSCCSSTTCCCSHHHHHHHHTTC----C-CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCcceeccchhHHHHHHHh-CCCCCCCCCCHHHHHHHHHhcCC----C-CCCCCcCCHHHHHHHHHHcCCChhHCcC
Confidence            9999999999999999999995 36789988765444444433211    1 1223456889999999999999999999


Q ss_pred             HHHHHHHHH
Q psy4332         168 FTEIHLFLQ  176 (188)
Q Consensus       168 ~~el~~~l~  176 (188)
                      ++||++.|.
T Consensus       314 ~~ei~~~L~  322 (325)
T d1rjba_         314 FPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998885

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-38  Score=231.90  Aligned_cols=155  Identities=21%  Similarity=0.311  Sum_probs=123.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++...............||+.|+|||++.
T Consensus       107 ~i~~qi~~al~ylH~~~IiHrDiKp--------~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~  178 (271)
T d1nvra_         107 RFFHQLMAGVVYLHGIGITHRDIKP--------ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  178 (271)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCccCcccH--------HHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhc
Confidence            4677899999999999999999999        99999999999999999998776554444455677999999999998


Q ss_pred             cCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHH-HHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEV-LENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +..+ +.++||||+||++|+|+  +|..||........ .......     .....+....++++.+++.+||+.||++|
T Consensus       179 ~~~~~~~~~DiwSlGvilyeml--~G~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~~~li~~~L~~dP~~R  251 (271)
T d1nvra_         179 RREFHAEPVDVWSCGIVLTAML--AGELPWDQPSDSCQEYSDWKEK-----KTYLNPWKKIDSAPLALLHKILVENPSAR  251 (271)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHH--HSSCSCSSSSTTSHHHHHHHTT-----CTTSTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCCCCCceeeeHhHHHHHHHH--hCCCCCCCCChHHHHHHHHhcC-----CCCCCccccCCHHHHHHHHHHcCCChhHC
Confidence            7775 57899999999999999  46789876543222 2222211     11122234568899999999999999999


Q ss_pred             CCHHHH--HHHHHh
Q psy4332         166 PSFTEI--HLFLQR  177 (188)
Q Consensus       166 ps~~el--~~~l~~  177 (188)
                      ||++|+  |+||++
T Consensus       252 ~t~~eil~hpwf~~  265 (271)
T d1nvra_         252 ITIPDIKKDRWYNK  265 (271)
T ss_dssp             CCHHHHTTCTTTTC
T ss_pred             cCHHHHhcCHhhCc
Confidence            999999  788864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.5e-37  Score=228.65  Aligned_cols=157  Identities=28%  Similarity=0.494  Sum_probs=120.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccc---cCCCCCCccccch
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRV---HDNTSLPIRWMAW   83 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~P   83 (188)
                      ..++.+++.|+.|+|+++|+||||||        +|||++.++.+||+|||+++..........   .....+|+.|+||
T Consensus       131 ~~i~~qia~gl~yLH~~~iiHrDlKp--------~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aP  202 (299)
T d1jpaa_         131 VGMLRGIAAGMKYLADMNYVHRDLAA--------RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP  202 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECCC-----------------------CGGGSCH
T ss_pred             HHHHHHHHHHHHHHhhCCCccCcccc--------ceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCH
Confidence            35678999999999999999999999        999999999999999999987654322111   1224468899999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      |.+.+..++.++|||||||++||++| .|..||.+....+....+.....      ......++.++.+++.+||+.||+
T Consensus       203 E~~~~~~~~~~sDvwS~Gvvl~el~t-~g~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~cl~~~P~  275 (299)
T d1jpaa_         203 EAIQYRKFTSASDVWSYGIVMWEVMS-YGERPYWDMTNQDVINAIEQDYR------LPPPMDCPSALHQLMLDCWQKDRN  275 (299)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSTT
T ss_pred             HHHhcCCCCcccccccchHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCCC------CCCCccchHHHHHHHHHHcCCCHh
Confidence            99998899999999999999999996 36899999988877776654221      122345788999999999999999


Q ss_pred             CCCCHHHHHHHHHhc
Q psy4332         164 ERPSFTEIHLFLQRK  178 (188)
Q Consensus       164 ~Rps~~el~~~l~~~  178 (188)
                      +|||+.|+++.|+++
T Consensus       276 ~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         276 HRPKFGQIVNTLDKM  290 (299)
T ss_dssp             TSCCHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHH
Confidence            999999999888876

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-37  Score=225.31  Aligned_cols=157  Identities=29%  Similarity=0.507  Sum_probs=120.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.|+.|+|+++|+||||||        +|||++.++.+||+|||+++........ .......+|+.|+|||+
T Consensus       113 ~~i~~~i~~gl~~lH~~~iiHrDlKp--------~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~  184 (283)
T d1mqba_         113 VGMLRGIAAGMKYLANMNYVHRDLAA--------RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA  184 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECCCCC-----------------CCCGGGSCHHH
T ss_pred             HHHHHHHHHhhhhccccccccCcccc--------ceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHH
Confidence            45778999999999999999999999        9999999999999999999876443221 22234567889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||||+++||++|+ +..|+.+....+....+....     . .......+.++.+++.+||+.||++|
T Consensus       185 l~~~~~~~~sDI~S~Gvil~el~t~-~~~~~~~~~~~~~~~~i~~~~-----~-~~~~~~~~~~l~~li~~cl~~~p~~R  257 (283)
T d1mqba_         185 ISYRKFTSASDVWSFGIVMWEVMTY-GERPYWELSNHEVMKAINDGF-----R-LPTPMDCPSAIYQLMMQCWQQERARR  257 (283)
T ss_dssp             HHSCCCCHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHHHTTC-----C-CCCCTTCBHHHHHHHHHHTCSSTTTS
T ss_pred             HccCCCCCcccccccHHHHHHHHhC-CCCccccCCHHHHHHHHhccC-----C-CCCchhhHHHHHHHHHHHCcCCHhHC
Confidence            9988999999999999999999963 456666666666666655322     1 12224578899999999999999999


Q ss_pred             CCHHHHHHHHHhc
Q psy4332         166 PSFTEIHLFLQRK  178 (188)
Q Consensus       166 ps~~el~~~l~~~  178 (188)
                      ||+.|+.+.|+++
T Consensus       258 Pt~~eil~~L~~l  270 (283)
T d1mqba_         258 PKFADIVSILDKL  270 (283)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHH
Confidence            9999998888766

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.5e-37  Score=226.05  Aligned_cols=158  Identities=33%  Similarity=0.594  Sum_probs=126.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|++||+||||||        +|||++.++.+||+|||+++....... .......+++.|+|||++
T Consensus       118 ~~i~~qi~~gL~yLH~~~iiHrDlKp--------~NILl~~~~~~Kl~DFG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~  188 (287)
T d1opja_         118 LYMATQISSAMEYLEKKNFIHRDLAA--------RNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESL  188 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCCCTTTCCSSSS-EEETTEEECGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCcccCcccc--------CeEEECCCCcEEEccccceeecCCCCc-eeeccccccccccChHHH
Confidence            34567999999999999999999999        999999999999999999987654322 233445578889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++||++|+ +..+|.+.........+....     . ......+++++.+++.+||+.||++||
T Consensus       189 ~~~~~~~k~DiwS~Gv~l~ell~~-~~p~~~~~~~~~~~~~i~~~~-----~-~~~~~~~~~~l~~li~~cl~~dP~~Rp  261 (287)
T d1opja_         189 AYNKFSIKSDVWAFGVLLWEIATY-GMSPYPGIDLSQVYELLEKDY-----R-MERPEGCPEKVYELMRACWQWNPSDRP  261 (287)
T ss_dssp             HHCCCSHHHHHHHHHHHHHHHHTT-SCCSSTTCCHHHHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCchhhhhhHHHHHHHHHhC-CCCCCCcchHHHHHHHHhcCC-----C-CCCCccchHHHHHHHHHHcCCCHhHCc
Confidence            999999999999999999999953 445566666655555443221     1 122245788999999999999999999


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      |++|++++|+.+.+
T Consensus       262 s~~ei~~~L~~~~~  275 (287)
T d1opja_         262 SFAEIHQAFETMFQ  275 (287)
T ss_dssp             CHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999988744

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-37  Score=225.20  Aligned_cols=156  Identities=30%  Similarity=0.595  Sum_probs=120.0

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|+|+++|+||||||        +||+++.++.+||+|||+++....... .......+|+.|+|||.+.
T Consensus       105 ~i~~qia~gl~~lH~~~iiHrDlKp--------~Nill~~~~~~Kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~  175 (263)
T d1sm2a_         105 GMCLDVCEGMAYLEEACVIHRDLAA--------RNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFS  175 (263)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTCSG--------GGEEECGGGCEEECSCC-------------------CTTSCCHHHHT
T ss_pred             HHHHHHHHHHHhhhccceeecccch--------hheeecCCCCeEecccchheeccCCCc-eeecceecCcccCChHHhc
Confidence            4678999999999999999999999        999999999999999999887654332 2223456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++||++|+ +..||......+....+.....      ...+...++++.+++.+||+.||++|||
T Consensus       176 ~~~~~~k~DVwS~Gvil~el~t~-~~~~~~~~~~~~~~~~i~~~~~------~~~p~~~~~~l~~li~~cl~~~p~~Rps  248 (263)
T d1sm2a_         176 FSRYSSKSDVWSFGVLMWEVFSE-GKIPYENRSNSEVVEDISTGFR------LYKPRLASTHVYQIMNHCWKERPEDRPA  248 (263)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHTT-SCCTTCSCCHHHHHHHHHHTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCchhhhcchHHHHHHHHHC-CCCCCCCCCHHHHHHHHHhcCC------CCCccccCHHHHHHHHHHccCCHhHCcC
Confidence            88999999999999999999963 5677877777777776654321      1122456789999999999999999999


Q ss_pred             HHHHHHHHHhcc
Q psy4332         168 FTEIHLFLQRKN  179 (188)
Q Consensus       168 ~~el~~~l~~~~  179 (188)
                      ++|+++.|+++.
T Consensus       249 ~~~il~~L~~i~  260 (263)
T d1sm2a_         249 FSRLLRQLAEIA  260 (263)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-37  Score=224.76  Aligned_cols=156  Identities=30%  Similarity=0.544  Sum_probs=128.3

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|+++|+||||||        +||+++.++.+||+|||+++...... ........+++.|+|||++
T Consensus       112 ~~i~~qi~~gl~~lH~~~ivHrDiKp--------~NIll~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~  182 (272)
T d1qpca_         112 LDMAAQIAEGMAFIEERNYIHRDLRA--------ANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI  182 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTSCEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCccch--------hheeeecccceeeccccceEEccCCc-cccccccCCcccccChHHH
Confidence            35678999999999999999999999        99999999999999999998775432 2334456688899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|||+|+ +..||......+....+....     . ......+++++.+++.+||+.||++||
T Consensus       183 ~~~~~~~~sDvwS~Gvvl~ellt~-~~~~~~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~l~~li~~cl~~~P~~Rp  255 (272)
T d1qpca_         183 NYGTFTIKSDVWSFGILLTEIVTH-GRIPYPGMTNPEVIQNLERGY-----R-MVRPDNCPEELYQLMRLCWKERPEDRP  255 (272)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hCCCCCchhhhhhhHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhcC-----C-CCCcccChHHHHHHHHHHcCCCHhHCc
Confidence            988899999999999999999963 466777777777766665322     1 112246788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      |++++++.|+++
T Consensus       256 t~~ei~~~L~~~  267 (272)
T d1qpca_         256 TFDYLRSVLEDF  267 (272)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHhhhh
Confidence            999998877754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-37  Score=225.26  Aligned_cols=155  Identities=28%  Similarity=0.540  Sum_probs=126.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc-cccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY-RVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.|+.|+|+++|+||||||        +||+++.++.+|++|||+++........ .......+|+.|+|||.+
T Consensus       111 ~i~~qi~~gl~ylH~~~iiHrDlKp--------~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l  182 (277)
T d1xbba_         111 ELVHQVSMGMKYLEESNFVHRDLAA--------RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI  182 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred             HHHHHHHHHHhhHHhCCcccCCCcc--------hhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhh
Confidence            4677999999999999999999999        9999999999999999999876543322 223345688999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++||++| .|..||.+....+....+....     .. ..+..++.++.+++.+||+.||++||
T Consensus       183 ~~~~~~~~sDiwS~Gv~l~ellt-~g~~Pf~~~~~~~~~~~i~~~~-----~~-~~p~~~~~~~~~li~~cl~~dp~~RP  255 (277)
T d1xbba_         183 NYYKFSSKSDVWSFGVLMWEAFS-YGQKPYRGMKGSEVTAMLEKGE-----RM-GCPAGCPREMYDLMNLCWTYDVENRP  255 (277)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHT-TTCCSSTTCCHHHHHHHHHTTC-----CC-CCCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             cCCCCCchhhhccchhhhhHHhh-CCCCCCCCCCHHHHHHHHHcCC-----CC-CCCcccCHHHHHHHHHHcCCCHhHCc
Confidence            98889999999999999999995 3689999988877777665422     11 12245788999999999999999999


Q ss_pred             CHHHHHHHHHh
Q psy4332         167 SFTEIHLFLQR  177 (188)
Q Consensus       167 s~~el~~~l~~  177 (188)
                      |++++...|+.
T Consensus       256 s~~~i~~~L~~  266 (277)
T d1xbba_         256 GFAAVELRLRN  266 (277)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHhhC
Confidence            99999766654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-37  Score=227.20  Aligned_cols=151  Identities=22%  Similarity=0.342  Sum_probs=125.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||++......      ....||+.|+|||++
T Consensus       118 ~~i~~qi~~aL~yLH~~~iiHrDiKp--------~NILl~~~~~~Kl~DFG~a~~~~~~------~~~~GT~~Y~APE~~  183 (309)
T d1u5ra_         118 AAVTHGALQGLAYLHSHNMIHRDVKA--------GNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVI  183 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSG--------GGEEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCCCc--------ceEEECCCCCEEEeecccccccCCC------CccccCccccCHHHH
Confidence            45678999999999999999999999        9999999999999999998765432      345689999999998


Q ss_pred             hc---CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          87 RL---RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        87 ~~---~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+   ..++.++||||+||++|+|+  +|..||.+....+....+....     .........++++.+|+.+||+.||+
T Consensus       184 ~~~~~~~y~~~~DiwSlGvilyel~--~g~~Pf~~~~~~~~~~~i~~~~-----~~~~~~~~~s~~~~~li~~~L~~dP~  256 (309)
T d1u5ra_         184 LAMDEGQYDGKVDVWSLGITCIELA--ERKPPLFNMNAMSALYHIAQNE-----SPALQSGHWSEYFRNFVDSCLQKIPQ  256 (309)
T ss_dssp             TTTTSCCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHHHHHHHHHHSC-----CCCCSCTTSCHHHHHHHHHHTCSSGG
T ss_pred             hccCCCCcCchhhhhhHHHHHHHHH--HCCCCCCCCCHHHHHHHHHhCC-----CCCCCCCCCCHHHHHHHHHHCcCChh
Confidence            64   34788999999999999999  5678999888777766665432     12223356788999999999999999


Q ss_pred             CCCCHHHH--HHHHHhc
Q psy4332         164 ERPSFTEI--HLFLQRK  178 (188)
Q Consensus       164 ~Rps~~el--~~~l~~~  178 (188)
                      +|||++|+  |+||.+.
T Consensus       257 ~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         257 DRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             GSCCHHHHTTCHHHHSC
T ss_pred             HCcCHHHHHhCHHhcCC
Confidence            99999999  7888753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-37  Score=225.71  Aligned_cols=157  Identities=27%  Similarity=0.518  Sum_probs=129.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++......... ......+|+.|+|||.
T Consensus       112 ~~i~~qi~~gL~ylH~~~iiHrDlKp--------~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (285)
T d1u59a_         112 AELLHQVSMGMKYLEEKNFVHRDLAA--------RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC  183 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHhCCeecCcCch--------hheeeccCCceeeccchhhhcccccccccccccccccCccccChHH
Confidence            34678899999999999999999999        99999999999999999998775443222 2234567889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++|||||||++||++| .|..||.+....+....+....     .. .....+++++.+++.+||+.||++|
T Consensus       184 ~~~~~~~~ksDVwS~Gv~l~E~lt-~G~~Pf~~~~~~~~~~~i~~~~-----~~-~~p~~~~~~l~~li~~cl~~~p~~R  256 (285)
T d1u59a_         184 INFRKFSSRSDVWSYGVTMWEALS-YGQKPYKKMKGPEVMAFIEQGK-----RM-ECPPECPPELYALMSDCWIYKWEDR  256 (285)
T ss_dssp             HHHCEECHHHHHHHHHHHHHHHHT-TSCCTTTTCCTHHHHHHHHTTC-----CC-CCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             HhCCCCCccchhhcchHHHHHHHh-CCCCCCCCCCHHHHHHHHHcCC-----CC-CCCCcCCHHHHHHHHHHcCCCHhHC
Confidence            998889999999999999999995 3689999888777776665422     11 1235678899999999999999999


Q ss_pred             CCHHHHHHHHHhc
Q psy4332         166 PSFTEIHLFLQRK  178 (188)
Q Consensus       166 ps~~el~~~l~~~  178 (188)
                      ||+.++++.|+..
T Consensus       257 Ps~~~i~~~L~~~  269 (285)
T d1u59a_         257 PDFLTVEQRMRAC  269 (285)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHH
Confidence            9999998777654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=225.84  Aligned_cols=160  Identities=23%  Similarity=0.240  Sum_probs=130.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+++.|+.|||++||+||||||        +|||++.++.+||+|||+++......   ......||+.|+|||++.
T Consensus       120 ~~~~qi~~aL~yLH~~~ivHrDiKp--------~NILi~~~~~~kl~dfg~~~~~~~~~---~~~~~~gT~~Y~APE~~~  188 (305)
T d1blxa_         120 DMMFQLLRGLDFLHSHRVVHRDLKP--------QNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLL  188 (305)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCEEecCCCc--------cEEEEcCCCCeeecchhhhhhhcccc---cCCCcccChhhcCcchhc
Confidence            4678899999999999999999999        99999999999999999987654332   335667899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc--------------------ccCCCCCCh
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF--------------------IYLPTPQTT  147 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~  147 (188)
                      +..++.++||||+||++|||+  +|..||.+....+....+..........                    ........+
T Consensus       189 ~~~y~~~~DiwSlG~il~ell--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  266 (305)
T d1blxa_         189 QSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID  266 (305)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC
T ss_pred             CCCCChhehhhchHHHHHHHH--HCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCC
Confidence            899999999999999999999  5679999988777766654322111110                    011124467


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         148 KDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       148 ~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      +++.+|+.+||+.||++|||++|+  |+||+++..
T Consensus       267 ~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~  301 (305)
T d1blxa_         267 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  301 (305)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence            889999999999999999999999  899998854

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=227.58  Aligned_cols=155  Identities=23%  Similarity=0.314  Sum_probs=125.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||++
T Consensus       113 ~~i~~qi~~gL~ylH~~~ivHrDiKp--------~NIll~~~~~~Kl~DFG~a~~~~~~~--~~~~~~~Gt~~y~APE~l  182 (288)
T d2jfla1         113 QVVCKQTLDALNYLHDNKIIHRDLKA--------GNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVV  182 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECHHHH--HHHTCCCSCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCEEEeecCh--------hheeECCCCCEEEEechhhhccCCCc--ccccccccccccCCHHHH
Confidence            45678899999999999999999999        99999999999999999987654322  223456789999999998


Q ss_pred             h-----cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccC
Q psy4332          87 R-----LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRS  161 (188)
Q Consensus        87 ~-----~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d  161 (188)
                      .     +..++.++||||+||++|+|+  +|..||.+....+....+.....    .........++++.+++.+||+.|
T Consensus       183 ~~~~~~~~~y~~k~DiwSlGvilyeml--tg~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~~s~~~~~li~~~L~~d  256 (288)
T d2jfla1         183 MCETSKDRPYDYKADVWSLGITLIEMA--EIEPPHHELNPMRVLLKIAKSEP----PTLAQPSRWSSNFKDFLKKCLEKN  256 (288)
T ss_dssp             TTCSTTTSSTTTHHHHHHHHHHHHHHH--HSSCTTTTSCGGGHHHHHHHSCC----CCCSSGGGSCHHHHHHHHHHSCSS
T ss_pred             hhcccCCCCCChhhhHHHHHHHHHHHh--hCCCCCCCCCHHHHHHHHHcCCC----CCCCccccCCHHHHHHHHHHccCC
Confidence            4     345788999999999999999  46789998887777766654321    111122456889999999999999


Q ss_pred             CCCCCCHHHH--HHHHHh
Q psy4332         162 PTERPSFTEI--HLFLQR  177 (188)
Q Consensus       162 p~~Rps~~el--~~~l~~  177 (188)
                      |++|||++|+  |+||+.
T Consensus       257 p~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         257 VDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             TTTSCCHHHHTTSGGGCC
T ss_pred             hhHCcCHHHHhcCcccCC
Confidence            9999999999  788864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-36  Score=218.93  Aligned_cols=156  Identities=26%  Similarity=0.515  Sum_probs=130.5

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++....... .......+|+.|+|||.+
T Consensus       103 ~~i~~qi~~gl~~LH~~~iiH~dlk~--------~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~  173 (258)
T d1k2pa_         103 LEMCKDVCEAMEYLESKQFLHRDLAA--------RNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVL  173 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCCSCCSG--------GGEEECTTCCEEECCCSSCCBCSSSSC-CCCCCSCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcccccccc--------eeEEEcCCCcEEECcchhheeccCCCc-eeecccCCCCCcCCcHHh
Confidence            35678999999999999999999999        999999999999999999977654332 233445688899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|||+| .|..||.+....++...+....     . ...+...+.++.+++.+||+.||++||
T Consensus       174 ~~~~~~~ksDiwS~G~~l~el~t-~g~~Pf~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~l~~li~~cl~~dP~~RP  246 (258)
T d1k2pa_         174 MYSKFSSKSDIWAFGVLMWEIYS-LGKMPYERFTNSETAEHIAQGL-----R-LYRPHLASEKVYTIMYSCWHEKADERP  246 (258)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTSCHHHHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             cCCCCCcceeecccchhhHhHHh-cCCCCCCCCCHHHHHHHHHhCC-----C-CCCcccccHHHHHHHHHHccCCHhHCc
Confidence            99999999999999999999996 3679999998888777775422     1 122345678999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      |+++++..|.++
T Consensus       247 t~~eil~~L~di  258 (258)
T d1k2pa_         247 TFKILLSNILDV  258 (258)
T ss_dssp             CHHHHHHHHHCC
T ss_pred             CHHHHHHHhhCC
Confidence            999998888654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-37  Score=228.88  Aligned_cols=157  Identities=27%  Similarity=0.485  Sum_probs=125.7

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||++||+||||||        +||+++.++.+||+|||+++...............+|+.|+|||.+
T Consensus       114 ~~i~~qi~~gl~yLH~~~iiHrDlKp--------~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l  185 (317)
T d1xkka_         114 LNWCVQIAKGMNYLEDRRLVHRDLAA--------RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI  185 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcccCcchh--------hcceeCCCCCeEeeccccceecccccccccccccccCccccChHHH
Confidence            34678999999999999999999999        9999999999999999998877554433333445678999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .++.++.++||||||+++|||+| .|..||.+....+....+....     . ......++.++.+++.+||..||++||
T Consensus       186 ~~~~~~~~sDvwS~Gvil~el~t-~g~~p~~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~~~~li~~cl~~dP~~RP  258 (317)
T d1xkka_         186 LHRIYTHQSDVWSYGVTVWELMT-FGSKPYDGIPASEISSILEKGE-----R-LPQPPICTIDVYMIMVKCWMIDADSRP  258 (317)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TSCCTTTTSCGGGHHHHHHHTC-----C-CCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             hcCCCChhhhhhhHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHcCC-----C-CCCCcccCHHHHHHHHHhCCCChhhCc
Confidence            99999999999999999999996 3688999887766666554322     1 112245688999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      |+.|++..|+++
T Consensus       259 s~~eil~~l~~~  270 (317)
T d1xkka_         259 KFRELIIEFSKM  270 (317)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999997776654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=225.84  Aligned_cols=149  Identities=19%  Similarity=0.274  Sum_probs=115.0

Q ss_pred             ccccchhhhhhhhcccc-----cccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           8 PQASNLAVVPLLRNKNG-----VEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~-----i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      .++.+|+.|+.|+|++|     |+||||||        +||+++.++.+||+|||+++......  .......||+.|+|
T Consensus       113 ~i~~qi~~al~ylH~~~~~~~~IiHrDiKp--------~NIll~~~~~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~A  182 (269)
T d2java1         113 RVMTQLTLALKECHRRSDGGHTVLHRDLKP--------ANVFLDGKQNVKLGDFGLARILNHDT--SFAKAFVGTPYYMS  182 (269)
T ss_dssp             HHHHHHHHHHHHHHHHCC---------CCG--------GGEEECTTSCEEECCHHHHHHC-------------CCCSCCC
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCEEeCcCch--------hhcCcCCCCcEEEeeccceeecccCC--CccccCCCCcccCC
Confidence            45778999999999876     99999999        99999999999999999988765432  22345668999999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||++.+..++.++||||+||++|+|+|  |..||.+.+..+....+.....      ......+++++.+++.+||+.||
T Consensus       183 PE~l~~~~~~~~~DIwSlGvilyel~t--g~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~s~~l~~li~~~L~~dp  254 (269)
T d2java1         183 PEQMNRMSYNEKSDIWSLGCLLYELCA--LMPPFTAFSQKELAGKIREGKF------RRIPYRYSDELNEIITRMLNLKD  254 (269)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHH--SSCSCCCSSHHHHHHHHHHTCC------CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHcCCCCChHHHHHhhCHHHHHHhh--CCCCCCCCCHHHHHHHHHcCCC------CCCCcccCHHHHHHHHHHcCCCh
Confidence            999998889999999999999999995  6789999888887777654322      11224678899999999999999


Q ss_pred             CCCCCHHHH--HHH
Q psy4332         163 TERPSFTEI--HLF  174 (188)
Q Consensus       163 ~~Rps~~el--~~~  174 (188)
                      ++|||++|+  |+|
T Consensus       255 ~~Rps~~ell~hp~  268 (269)
T d2java1         255 YHRPSVEEILENPL  268 (269)
T ss_dssp             GGSCCHHHHHTSTT
T ss_pred             hHCcCHHHHHhCCc
Confidence            999999999  444

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-36  Score=224.88  Aligned_cols=152  Identities=18%  Similarity=0.230  Sum_probs=128.3

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +|||++.+|.+||+|||+++.......  ......||+.|+|||++.
T Consensus       109 ~~~~qil~al~ylH~~~iiHRDlKP--------~NILl~~~g~vkl~DFG~a~~~~~~~~--~~~~~~GT~~Y~aPE~~~  178 (337)
T d1o6la_         109 FYGAEIVSALEYLHSRDVVYRDIKL--------ENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLE  178 (337)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGS
T ss_pred             HHHHHHhhhhhhhhhcCccccccCH--------HHeEecCCCCEEEeecccccccccCCc--ccccceeCHHHhhhhhcc
Confidence            4567899999999999999999999        999999999999999999987644332  334567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||+||++|+|+  +|..||.+.+..++...+.....       ..+..++.++.+|+.+||+.||++|++
T Consensus       179 ~~~y~~~~DiwSlGvilyeml--~G~~pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         179 DNDYGRAVDWWGLGVVMYEMM--CGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             SSCBCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCCChhhcccchhhHHHHHH--HCCCCCCCcCHHHHHHHHhcCCC-------CCCccCCHHHHHHHHhhccCCchhhcc
Confidence            999999999999999999999  46789999988777776654321       122457889999999999999999995


Q ss_pred             -----HHHH--HHHHHhc
Q psy4332         168 -----FTEI--HLFLQRK  178 (188)
Q Consensus       168 -----~~el--~~~l~~~  178 (188)
                           ++|+  |+||+++
T Consensus       250 ~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         250 GGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CSTTTHHHHHTSGGGTTC
T ss_pred             cccccHHHHHcCcccccC
Confidence                 8888  8888765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-36  Score=221.47  Aligned_cols=157  Identities=32%  Similarity=0.555  Sum_probs=132.3

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ...+.+|+.|+.|+|+++|+||||||        +|||++.++.+||+|||+++...............+++.|+|||.+
T Consensus       138 ~~~~~qi~~al~ylH~~~ivHrDiKp--------~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l  209 (299)
T d1fgka_         138 VSCAYQVARGMEYLASKKCIHRDLAA--------RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL  209 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHhhhCCEEeeeecc--------cceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHh
Confidence            35677999999999999999999999        9999999999999999999877655444444556688899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .++.++.++||||||+++|||+| .|..||.+....+....+....     . ......+++++.+++.+||+.||++||
T Consensus       210 ~~~~y~~k~DiwS~Gvvl~ell~-~g~~p~~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~l~~li~~cl~~dP~~Rp  282 (299)
T d1fgka_         210 FDRIYTHQSDVWSFGVLLWEIFT-LGGSPYPGVPVEELFKLLKEGH-----R-MDKPSNCTNELYMMMRDCWHAVPSQRP  282 (299)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TSCCSSTTCCHHHHHHHHHTTC-----C-CCCCSSCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCchhhhHHhHHHHHHhcc-CCCCCCCCCCHHHHHHHHHcCC-----C-CCCCccchHHHHHHHHHHccCCHhHCc
Confidence            99999999999999999999995 3678998888777766554321     1 122345788999999999999999999


Q ss_pred             CHHHHHHHHHhc
Q psy4332         167 SFTEIHLFLQRK  178 (188)
Q Consensus       167 s~~el~~~l~~~  178 (188)
                      |+.|+++.|+++
T Consensus       283 s~~eil~~L~~i  294 (299)
T d1fgka_         283 TFKQLVEDLDRI  294 (299)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999999999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=220.93  Aligned_cols=155  Identities=32%  Similarity=0.586  Sum_probs=119.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|+++|+||||||        +||+++.++.+||+|||+++....... .......+|+.|+|||.+.
T Consensus       112 ~~~~qi~~gl~ylH~~~iiHrDlKp--------~NIll~~~~~~Kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~apE~l~  182 (273)
T d1mp8a_         112 LYAYQLSTALAYLESKRFVHRDIAA--------RNVLVSSNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESIN  182 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEEETTEEEECC--------------------CCGGGCCHHHHH
T ss_pred             HHHHHHHHHhhhhcccCeeccccch--------hheeecCCCcEEEccchhheeccCCcc-eeccceecCcccchhhHhc
Confidence            4567899999999999999999999        999999999999999999887644322 2334456788999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++|||||||++|||+| .|..||.+....+....+.....      ....+.+++++.+++.+||..||++|||
T Consensus       183 ~~~~~~~~DiwSlGvil~e~lt-~g~~P~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~li~~cl~~dp~~Rps  255 (273)
T d1mp8a_         183 FRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNNDVIGRIENGER------LPMPPNCPPTLYSLMTKCWAYDPSRRPR  255 (273)
T ss_dssp             HCCCSHHHHHHHHHHHHHHHHT-TSCCTTTTCCGGGHHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCCccccccchHHHHHHHh-cCCCCCCCCCHHHHHHHHHcCCC------CCCCCCCCHHHHHHHHHHcCCCHhHCcC
Confidence            8999999999999999999996 36889998888777776654321      1223567899999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      ++|+++.|+++
T Consensus       256 ~~ei~~~L~~i  266 (273)
T d1mp8a_         256 FTELKAQLSTI  266 (273)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998888776

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-36  Score=219.40  Aligned_cols=160  Identities=30%  Similarity=0.544  Sum_probs=125.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+|+.|+.|||++||+||||||        +||+++.++.+||+|||+++...... ........+|+.|+|||++
T Consensus       116 ~~i~~~i~~gl~~LH~~~ivH~DlKp--------~NIll~~~~~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~  186 (285)
T d1fmka3         116 VDMAAQIASGMAYVERMNYVHRDLRA--------ANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA  186 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhheecccccc--------eEEEECCCCcEEEcccchhhhccCCC-ceeeccccccccccChHHH
Confidence            45788999999999999999999999        99999999999999999987664332 1233445688999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++||++|+ +..|+.+....+....+.....      ......+++++.+++.+||+.||++||
T Consensus       187 ~~~~~~~ksDI~S~Giil~el~t~-~~p~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rp  259 (285)
T d1fmka3         187 LYGRFTIKSDVWSFGILLTELTTK-GRVPYPGMVNREVLDQVERGYR------MPCPPECPESLHDLMCQCWRKEPEERP  259 (285)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTT-TCCSSTTCCHHHHHHHHHTTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hCCCCCcHHhhhcchHHHHHHHhC-CCCCCCCCCHHHHHHHHHhcCC------CCCCcccCHHHHHHHHHHcccCHhHCc
Confidence            999999999999999999999963 4666777777777776654221      122356788999999999999999999


Q ss_pred             CHHHHHHHHHhccCCC
Q psy4332         167 SFTEIHLFLQRKNLGY  182 (188)
Q Consensus       167 s~~el~~~l~~~~~~~  182 (188)
                      ++++|+++|++.-...
T Consensus       260 s~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         260 TFEYLQAFLEDYFTST  275 (285)
T ss_dssp             CHHHHHHHHHTTTSCS
T ss_pred             CHHHHHHHHhhhhcCC
Confidence            9999999888764433

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-36  Score=224.79  Aligned_cols=154  Identities=19%  Similarity=0.239  Sum_probs=116.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc---CcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG---KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      .++.+|+.|+.|+|++||+||||||        +||++.   .++.+||+|||+++......   ......||+.|+|||
T Consensus       111 ~~~~qi~~al~ylH~~~iiHrDiKp--------~Nil~~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~GT~~y~APE  179 (307)
T d1a06a_         111 RLIFQVLDAVKYLHDLGIVHRDLKP--------ENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE  179 (307)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEESSSSTTCCEEECCC---------------------CTTSCHH
T ss_pred             HHHHHHHHHHHhhhhceeeeEEecc--------cceeecccCCCceEEEeccceeEEccCCC---eeeeeeeCccccCcH
Confidence            4577899999999999999999999        999985   46889999999987664332   234556899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTE  164 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~  164 (188)
                      ++.+..++.++||||+||++|+|+  +|..||.+....+....+......   .........++++.+++.+||+.||++
T Consensus       180 ~~~~~~~~~~~DiwSlGvilyell--~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~  254 (307)
T d1a06a_         180 VLAQKPYSKAVDCWSIGVIAYILL--CGYPPFYDENDAKLFEQILKAEYE---FDSPYWDDISDSAKDFIRHLMEKDPEK  254 (307)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHTTCCC---CCTTTTTTSCHHHHHHHHHHSCSSGGG
T ss_pred             HHcCCCCCcHHHhhhhhHHHHHHH--hCCCCCCCCCHHHHHHHHhccCCC---CCCccccCCCHHHHHHHHHHccCCHhH
Confidence            999888999999999999999999  567999998887877777653321   122223567889999999999999999


Q ss_pred             CCCHHHH--HHHHHh
Q psy4332         165 RPSFTEI--HLFLQR  177 (188)
Q Consensus       165 Rps~~el--~~~l~~  177 (188)
                      |||++|+  |+||+.
T Consensus       255 R~s~~eil~hp~~~~  269 (307)
T d1a06a_         255 RFTCEQALQHPWIAG  269 (307)
T ss_dssp             SCCHHHHHHSTTTTS
T ss_pred             CcCHHHHhcCHhhCC
Confidence            9999999  678874

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=220.62  Aligned_cols=158  Identities=28%  Similarity=0.512  Sum_probs=129.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~   85 (188)
                      ..++.+++.|+.|+|+++|+||||||        .||+++.++.+||+|||+++......... ......++..|+|||.
T Consensus       114 ~~~~~qi~~gl~ylH~~~iiHrDikp--------~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~  185 (273)
T d1u46a_         114 SRYAVQVAEGMGYLESKRFIHRDLAA--------RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES  185 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCG--------GGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHhhhCCEeeeeecH--------HHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHH
Confidence            35678999999999999999999999        99999999999999999998775443322 2234457788999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||||+++|||+| .|..||.+....+....+......     ......++.++.+++.+||..||++|
T Consensus       186 ~~~~~~~~~~Di~S~Gvil~emlt-~G~~Pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~R  259 (273)
T d1u46a_         186 LKTRTFSHASDTWMFGVTLWEMFT-YGQEPWIGLNGSQILHKIDKEGER-----LPRPEDCPQDIYNVMVQCWAHKPEDR  259 (273)
T ss_dssp             HHHCEEEHHHHHHHHHHHHHHHHT-TSCCTTTTCCHHHHHHHHHTSCCC-----CCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HhCCCCCcchhhhhhHHHHHHHHh-CCCCCCCCcCHHHHHHHHHhCCCC-----CCCcccccHHHHHHHHHHcCCChhHC
Confidence            998889999999999999999996 268999999888887776543211     12235678899999999999999999


Q ss_pred             CCHHHHHHHHHhc
Q psy4332         166 PSFTEIHLFLQRK  178 (188)
Q Consensus       166 ps~~el~~~l~~~  178 (188)
                      ||+.|++++|++.
T Consensus       260 Pt~~ei~~~L~~~  272 (273)
T d1u46a_         260 PTFVALRDFLLEA  272 (273)
T ss_dssp             CCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhc
Confidence            9999999999875

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.7e-36  Score=223.79  Aligned_cols=149  Identities=21%  Similarity=0.307  Sum_probs=127.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++.....     .....||+.|+|||++.
T Consensus       108 ~~~~qi~~al~~lH~~~iiHrDiKp--------~NILl~~~g~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~l~  174 (316)
T d1fota_         108 FYAAEVCLALEYLHSKDIIYRDLKP--------ENILLDKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVS  174 (316)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCG--------GGEEECTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHhhhhhccCcEEccccCc--------hheeEcCCCCEEEecCccceEeccc-----cccccCcccccCHHHHc
Confidence            3567899999999999999999999        9999999999999999999876543     23567899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC-
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP-  166 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-  166 (188)
                      +..++.++||||+||++|+|+  +|..||.+.+..+...++.....       ...+..++++.+++.+||+.||++|+ 
T Consensus       175 ~~~y~~~~DiwSlGvilyeml--tG~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dp~~R~~  245 (316)
T d1fota_         175 TKPYNKSIDWWSFGILIYEML--AGYTPFYDSNTMKTYEKILNAEL-------RFPPFFNEDVKDLLSRLITRDLSQRLG  245 (316)
T ss_dssp             TCCBCTTHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred             CCCCCchhhccccchhHHHHH--hCCCCCCCcCHHHHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhhhCHHhccc
Confidence            888999999999999999999  56799999988888777764321       12245688999999999999999996 


Q ss_pred             ----CHHHH--HHHHHhc
Q psy4332         167 ----SFTEI--HLFLQRK  178 (188)
Q Consensus       167 ----s~~el--~~~l~~~  178 (188)
                          +++++  |+||+++
T Consensus       246 ~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         246 NLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             SSTTTTHHHHTSGGGSSC
T ss_pred             cchhhHHHHHcCcccccC
Confidence                89999  8888765

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=227.50  Aligned_cols=159  Identities=21%  Similarity=0.340  Sum_probs=119.5

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+++.|+.|+|+ +||+||||||        +|||++.++.+||+|||+|+.....    ......||+.|+|||++
T Consensus       108 ~~~~qil~aL~yLH~~~~IiHRDiKP--------~NILl~~~~~vkl~DFGla~~~~~~----~~~~~~GT~~Y~APEvl  175 (322)
T d1s9ja_         108 KVSIAVIKGLTYLREKHKIMHRDVKP--------SNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERL  175 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCSCCSG--------GGEEECTTCCEEECCCCCCHHHHHH----TC---CCSSCCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCEEccccCH--------HHeeECCCCCEEEeeCCCccccCCC----ccccccCCccccCchHH
Confidence            456789999999997 5999999999        9999999999999999998865332    22345789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC--------------------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD--------------------------------  134 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~--------------------------------  134 (188)
                      .+..++.++||||+||++|||+  +|..||.+.+..+...........                                
T Consensus       176 ~~~~y~~~~DiWSlGvil~ell--~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (322)
T d1s9ja_         176 QGTHYSVQSDIWSMGLSLVEMA--VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFEL  253 (322)
T ss_dssp             HCSCCCTTHHHHHHHHHHHHHH--HSSCCSSCCCTTHHHHHC------------------------------CCCCHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHHH--HCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHH
Confidence            9999999999999999999999  567898765432211110000000                                


Q ss_pred             -----CCCcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         135 -----DGEFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       135 -----~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                           .......+....+.++.+++.+||+.||++|||++|+  |+||++...
T Consensus       254 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         254 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             HHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             HhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCc
Confidence                 0000111223357899999999999999999999999  899987643

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=220.38  Aligned_cols=149  Identities=17%  Similarity=0.257  Sum_probs=117.6

Q ss_pred             ccccchhhhhhhhcccc--cccccchhhhhccccccceEEc-CcceEEEccCCCCccCCCCccccccCCCCCCccccchh
Q psy4332           8 PQASNLAVVPLLRNKNG--VEHSSLKKKCIKIFDFKNCLVG-KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWE   84 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~--i~h~~lk~~~i~~~~~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe   84 (188)
                      ..+.+|+.|+.|+|+++  |+||||||        +|||++ .++.+||+|||+++.....    ......||+.|+|||
T Consensus       116 ~~~~qi~~gl~yLH~~~~~IiHrDiKp--------~NILl~~~~~~~Kl~DFGla~~~~~~----~~~~~~GT~~Y~aPE  183 (270)
T d1t4ha_         116 SWCRQILKGLQFLHTRTPPIIHRDLKC--------DNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPE  183 (270)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCSCCCG--------GGEEESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGG
T ss_pred             HHHHHHHHHHHHHHHCCCCEEeCCcCh--------hhceeeCCCCCEEEeecCcceeccCC----ccCCcccCccccCHH
Confidence            45789999999999999  99999999        999996 4789999999998754332    123456899999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      ++. +.++.++||||+||++|+|+  +|..||.+... ..+...+....     .........++++.+++.+||+.||+
T Consensus       184 ~~~-~~~~~~~DIwSlGvilyel~--~g~~Pf~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~  255 (270)
T d1t4ha_         184 MYE-EKYDESVDVYAFGMCMLEMA--TSEYPYSECQNAAQIYRRVTSGV-----KPASFDKVAIPEVKEIIEGCIRQNKD  255 (270)
T ss_dssp             GGG-TCCCTHHHHHHHHHHHHHHH--HSSCTTTTCSSHHHHHHHHTTTC-----CCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             HhC-CCCCCcCchhhHHHHHHHHH--HCCCCCCCcccHHHHHHHHHcCC-----CCcccCccCCHHHHHHHHHHccCCHh
Confidence            986 46899999999999999999  56789987654 44444443321     11112244677899999999999999


Q ss_pred             CCCCHHHH--HHHHH
Q psy4332         164 ERPSFTEI--HLFLQ  176 (188)
Q Consensus       164 ~Rps~~el--~~~l~  176 (188)
                      +|||++|+  |+||+
T Consensus       256 ~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         256 ERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GSCCHHHHHTSGGGC
T ss_pred             HCcCHHHHhCCcccC
Confidence            99999999  66774

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.9e-36  Score=226.46  Aligned_cols=150  Identities=18%  Similarity=0.224  Sum_probs=127.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.....     .....||+.|+|||++
T Consensus       144 ~~i~~qi~~aL~yLH~~~iiHRDIKP--------~NILl~~~g~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~  210 (350)
T d1rdqe_         144 RFYAAQIVLTFEYLHSLDLIYRDLKP--------ENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEII  210 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCEecCcCCH--------HHcccCCCCCEEeeeceeeeecccc-----cccccCccccCCHHHH
Confidence            34678899999999999999999999        9999999999999999999876432     2356689999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+||++|+|+  +|..||.+.........+.....       .....+++++.+++.+||+.||++|+
T Consensus       211 ~~~~~~~~~DiwSlGvilyeml--tG~~Pf~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~L~~dP~kR~  281 (350)
T d1rdqe_         211 LSKGYNKAVDWWALGVLIYEMA--AGYPPFFADQPIQIYEKIVSGKV-------RFPSHFSSDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHCCC-------CCCTTCCHHHHHHHHHHSCSCTTTCT
T ss_pred             cCCCCCccccccchhHHHHHHH--hCCCCCCCcCHHHHHHHHhcCCC-------CCCccCCHHHHHHHHHHhhhCHHhcc
Confidence            9888999999999999999999  56799999888887777764321       12246788999999999999999995


Q ss_pred             -----CHHHH--HHHHHhc
Q psy4332         167 -----SFTEI--HLFLQRK  178 (188)
Q Consensus       167 -----s~~el--~~~l~~~  178 (188)
                           +++++  |+||+.+
T Consensus       282 ~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         282 GNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TSSTTTTHHHHTSGGGTTC
T ss_pred             ccccccHHHHHcCccccCC
Confidence                 89999  8888754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.6e-36  Score=228.48  Aligned_cols=157  Identities=20%  Similarity=0.239  Sum_probs=128.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC--cceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK--KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.  ++.+||+|||+++......   ......||+.|+|||+
T Consensus       128 ~i~~qi~~aL~ylH~~~iiHrDiKp--------~NIll~~~~~~~vkL~DFG~a~~~~~~~---~~~~~~gT~~Y~aPEv  196 (350)
T d1koaa2         128 EYMRQVCKGLCHMHENNYVHLDLKP--------ENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEV  196 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSTTSCCEEECCCTTCEECCTTS---CEEEECSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHhcCCeeeeech--------hHeeeccCCCCeEEEeecchheeccccc---ccceecCcccccCHHH
Confidence            4577999999999999999999999        9999964  5789999999998765432   2234567899999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+||++|+|+  +|..||.+.+..+....+.........   .....+++++.+|+.+||..||++|
T Consensus       197 ~~~~~~~~~~DiwSlGvilyell--~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R  271 (350)
T d1koaa2         197 AEGKPVGYYTDMWSVGVLSYILL--SGLSPFGGENDDETLRNVKSCDWNMDD---SAFSGISEDGKDFIRKLLLADPNTR  271 (350)
T ss_dssp             HHTCCBCHHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCCSCC---GGGGGCCHHHHHHHHHHCCSSGGGS
T ss_pred             HcCCCCChhHhhhhhhHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCCCCc---ccccCCCHHHHHHHHHHccCChhHC
Confidence            99888999999999999999999  567899998888887777654322211   1124567899999999999999999


Q ss_pred             CCHHHH--HHHHHhccC
Q psy4332         166 PSFTEI--HLFLQRKNL  180 (188)
Q Consensus       166 ps~~el--~~~l~~~~~  180 (188)
                      ||++|+  |+||++.+.
T Consensus       272 ~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         272 MTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             CCHHHHHHSTTTSCTTC
T ss_pred             cCHHHHhcCcccCCCCC
Confidence            999999  778887644

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.1e-36  Score=227.98  Aligned_cols=158  Identities=18%  Similarity=0.270  Sum_probs=129.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEc--CcceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVG--KKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|+|++||+||||||        +|||++  .++.+||+|||++.......   ......+|+.|+|||+
T Consensus       131 ~i~~qi~~aL~ylH~~~iiHRDiKp--------~NILl~~~~~~~vkL~DFGla~~~~~~~---~~~~~~gt~~y~aPE~  199 (352)
T d1koba_         131 NYMRQACEGLKHMHEHSIVHLDIKP--------ENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEI  199 (352)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSTTCCCEEECCCTTCEECCTTS---CEEEECSSGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeeccccc--------ccccccccCCCeEEEeecccceecCCCC---ceeeccCcccccCHHH
Confidence            3567899999999999999999999        999997  56889999999998775432   2234567889999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+||++|+|+  +|..||.+....+....+.......   ........+.++.+|+.+||+.||++|
T Consensus       200 ~~~~~~~~~~DiwSlGvilyell--tG~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dp~~R  274 (352)
T d1koba_         200 VDREPVGFYTDMWAIGVLGYVLL--SGLSPFAGEDDLETLQNVKRCDWEF---DEDAFSSVSPEAKDFIKNLLQKEPRKR  274 (352)
T ss_dssp             HTTCCBCHHHHHHHHHHHHHHHH--HSCCSSCCSSHHHHHHHHHHCCCCC---CSSTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             HcCCCCCCccchHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCCC---CcccccCCCHHHHHHHHHHccCChhHC
Confidence            99888999999999999999999  5678999988888777776543221   122235678899999999999999999


Q ss_pred             CCHHHH--HHHHHhccCC
Q psy4332         166 PSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       166 ps~~el--~~~l~~~~~~  181 (188)
                      ||++|+  |+||+.....
T Consensus       275 ~s~~eil~Hp~~~~~~~~  292 (352)
T d1koba_         275 LTVHDALEHPWLKGDHSN  292 (352)
T ss_dssp             CCHHHHHTSTTTSSCCTT
T ss_pred             cCHHHHhcCHhhCCCcch
Confidence            999999  7788765443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=219.24  Aligned_cols=163  Identities=19%  Similarity=0.187  Sum_probs=128.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++.......  ......+|+.|+|||.+
T Consensus       103 ~~~~~qil~aL~~lH~~~iiHrDiKp--------~NIli~~~~~~KL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~  172 (299)
T d1ua2a_         103 KAYMLMTLQGLEYLHQHWILHRDLKP--------NNLLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELL  172 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHhhccceecccCCc--------ceEEecCCCccccccCccccccCCCcc--cccceecChhhccHHHH
Confidence            34567899999999999999999999        999999999999999999887654432  23345688999999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc--------------C-------CCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY--------------L-------PTP  144 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------~-------~~~  144 (188)
                      .+. .++.++||||+||++|+|+|  |..||.+....+....+............              .       ..+
T Consensus       173 ~~~~~~~~~~DiwSlGvil~el~~--g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (299)
T d1ua2a_         173 FGARMYGVGVDMWAVGCILAELLL--RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS  250 (299)
T ss_dssp             TTCSCCCHHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCT
T ss_pred             ccCCCCChhhhhhhcchHHHHHHh--CcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcc
Confidence            754 47899999999999999995  57899988877776665432221111000              0       012


Q ss_pred             CChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         145 QTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       145 ~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      ..++++.+|+.+||+.||++|||++|+  |+||++....
T Consensus       251 ~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         251 AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  289 (299)
T ss_dssp             TCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCC
Confidence            457889999999999999999999999  7899876543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=221.43  Aligned_cols=153  Identities=24%  Similarity=0.345  Sum_probs=128.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......||+.|+|||.+
T Consensus       106 ~~~~~qi~~al~ylH~~~iiHrDikp--------~NiL~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~  175 (320)
T d1xjda_         106 TFYAAEIILGLQFLHSKGIVYRDLKL--------DNILLDKDGHIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEIL  175 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCG--------GGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCcc--------cceeecCCCceeccccchhhhccccc--ccccccCCCCCcCCHHHH
Confidence            34678899999999999999999999        99999999999999999998665432  233456789999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+||++|+|+|  |..||.+....++...+.....       ......+.++.+|+.+||+.||++||
T Consensus       176 ~~~~~~~~~DiwSlGvilyemlt--G~~PF~~~~~~~~~~~i~~~~~-------~~p~~~s~~~~dli~~~L~~dP~~R~  246 (320)
T d1xjda_         176 LGQKYNHSVDWWSFGVLLYEMLI--GQSPFHGQDEEELFHSIRMDNP-------FYPRWLEKEAKDLLVKLFVREPEKRL  246 (320)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHH--SSCSSCCSSHHHHHHHHHHCCC-------CCCTTSCHHHHHHHHHHSCSSGGGSB
T ss_pred             cCCCCCchhhhhhhhHHHHHHHh--CCCCCCCCCHHHHHHHHHcCCC-------CCCccCCHHHHHHHHHhcccCCCCCc
Confidence            99999999999999999999994  6799999888887777654321       11245688999999999999999999


Q ss_pred             CHH-HH--HHHHHhc
Q psy4332         167 SFT-EI--HLFLQRK  178 (188)
Q Consensus       167 s~~-el--~~~l~~~  178 (188)
                      ++. ++  |+||+++
T Consensus       247 s~~~~l~~hpff~~~  261 (320)
T d1xjda_         247 GVRGDIRQHPLFREI  261 (320)
T ss_dssp             TTBSCGGGSGGGTTC
T ss_pred             CHHHHHHhCchhccC
Confidence            995 77  8888765

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.7e-35  Score=223.96  Aligned_cols=153  Identities=17%  Similarity=0.179  Sum_probs=120.4

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|++||+||||||        +|||++.++.+||+|||+++.....    ......||+.|+|||++.
T Consensus       111 ~~~~qi~~aL~ylH~~~iiHrDlKP--------~NILl~~~g~iKl~DFGla~~~~~~----~~~~~~GT~~y~APE~~~  178 (364)
T d1omwa3         111 FYAAEIILGLEHMHNRFVVYRDLKP--------ANILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQ  178 (364)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECSSSCEEECCCTTCEECSSS----CCCSCCSCGGGCCHHHHS
T ss_pred             HHHHHHHHHHHHHHHCCccceeecc--------ceeEEcCCCcEEEeeeceeeecCCC----cccccccccccchhHHhh
Confidence            4567899999999999999999999        9999999999999999999876543    224557899999999996


Q ss_pred             c-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          88 L-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        88 ~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      . ..++.++||||+||++|+|+  +|..||.+..............    .........+++++.++|.+||+.||++||
T Consensus       179 ~~~~~~~~~DiwSlGvilyeml--tG~~Pf~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~  252 (364)
T d1omwa3         179 KGVAYDSSADWFSLGCMLFKLL--RGHSPFRQHKTKDKHEIDRMTL----TMAVELPDSFSPELRSLLEGLLQRDVNRRL  252 (364)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHH--HSSCSSCSSCSSCHHHHHHHSS----SCCCCCCSSSCHHHHHHHHHHTCSSTTTST
T ss_pred             cCCCCCcccchhHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhcc----cCCCCCCCCCCHHHHHHHHHHcccCHHHhC
Confidence            4 46899999999999999999  4678997654322221111111    111222346788999999999999999999


Q ss_pred             C-----HHHH--HHHHHhc
Q psy4332         167 S-----FTEI--HLFLQRK  178 (188)
Q Consensus       167 s-----~~el--~~~l~~~  178 (188)
                      |     ++|+  |+||+.+
T Consensus       253 t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         253 GCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             TTSSSTHHHHHTSGGGTTC
T ss_pred             CCcccCHHHHHcCccccCC
Confidence            9     6888  8898765

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-35  Score=216.38  Aligned_cols=159  Identities=37%  Similarity=0.653  Sum_probs=134.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|||+++|+||||||        .|||++.++++||+|||+++...............+++.|++||.+
T Consensus       136 ~~i~~~ia~gl~~LH~~~ivHrDlk~--------~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l  207 (308)
T d1p4oa_         136 IQMAGEIADGMAYLNANKFVHRDLAA--------RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL  207 (308)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCSCCSG--------GGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCeeeceEcC--------CceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHH
Confidence            45788999999999999999999999        9999999999999999999877555444444555688999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|||+|+ +..||.+....+....+....     . ......++.++.+++.+||+.||++||
T Consensus       208 ~~~~~~~~~Dv~S~G~il~El~t~-~~~p~~~~~~~~~~~~i~~~~-----~-~~~p~~~~~~l~~li~~cl~~~P~~RP  280 (308)
T d1p4oa_         208 KDGVFTTYSDVWSFGVVLWEIATL-AEQPYQGLSNEQVLRFVMEGG-----L-LDKPDNCPDMLFELMRMCWQYNPKMRP  280 (308)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHHT-SCCTTTTSCHHHHHHHHHTTC-----C-CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCCCcccccccHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhCC-----C-CCCcccchHHHHHHHHHHcCCChhHCc
Confidence            999999999999999999999974 468999988888877765432     1 112245778999999999999999999


Q ss_pred             CHHHHHHHHHhccC
Q psy4332         167 SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 s~~el~~~l~~~~~  180 (188)
                      |++++++.|++.-+
T Consensus       281 s~~~il~~L~~~~~  294 (308)
T d1p4oa_         281 SFLEIISSIKEEME  294 (308)
T ss_dssp             CHHHHHHHHGGGSC
T ss_pred             CHHHHHHHHHHhcC
Confidence            99999998887633

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-35  Score=219.51  Aligned_cols=156  Identities=21%  Similarity=0.261  Sum_probs=127.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc----eEEEccCCCCccCCCCccccccCCCCCCccccc
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF----EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA   82 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~   82 (188)
                      +.++.+++.|+.|||++||+||||||        +||+++.++    .+|++|||++.......   ......+|+.|+|
T Consensus       116 ~~~~~qi~~al~yLH~~~ivHrDiKp--------~Nill~~~~~~~~~vkl~DfG~a~~~~~~~---~~~~~~~t~~y~A  184 (293)
T d1jksa_         116 TEFLKQILNGVYYLHSLQIAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVA  184 (293)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEESCSSSSSCCEEECCCTTCEECTTSC---BCSCCCCCGGGCC
T ss_pred             HHHHHHHHHHHHhhhhcceeeccccc--------ceEEEecCCCcccceEecchhhhhhcCCCc---cccccCCCCcccC
Confidence            34577899999999999999999999        999998776    49999999988765443   2345568889999


Q ss_pred             hhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          83 WESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        83 Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      ||.+.+..++.++||||+||++|+|+  +|..||.+.+..+....+.........   ...+..+.++.+|+.+||+.||
T Consensus       185 PE~~~~~~~~~~~DiwSlGvilyell--~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP  259 (293)
T d1jksa_         185 PEIVNYEPLGLEADMWSIGVITYILL--SGASPFLGDTKQETLANVSAVNYEFED---EYFSNTSALAKDFIRRLLVKDP  259 (293)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHTTCCCCCH---HHHTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHcCCCCCCcccchhhhHHHHHHH--cCCCCCCCCCHHHHHHHHHhcCCCCCc---hhcCCCCHHHHHHHHHHccCCh
Confidence            99999888999999999999999999  567999998888877776654322111   1124568899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhc
Q psy4332         163 TERPSFTEI--HLFLQRK  178 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~  178 (188)
                      ++|||++|+  |+||+..
T Consensus       260 ~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         260 KKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             GGSCCHHHHHHSTTTCC-
T ss_pred             hHCcCHHHHhcCcccCCC
Confidence            999999999  7788754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=218.48  Aligned_cols=157  Identities=34%  Similarity=0.548  Sum_probs=127.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ...+.+++.|+.|+|+++|+||||||        +|||++.++.+||+|||+++......   ......+|..|+|||.+
T Consensus       130 ~~~~~qia~gl~~lH~~~iiHrDlkp--------~NIL~~~~~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l  198 (309)
T d1fvra_         130 LHFAADVARGMDYLSQKQFIHRDLAA--------RNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESL  198 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCcccccccc--------ceEEEcCCCceEEccccccccccccc---cccceecCCcccchHHh
Confidence            34678999999999999999999999        99999999999999999987654332   22344578889999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|||+++ +..||.+.+..+....+....     . .......++++.+++.+||+.||++||
T Consensus       199 ~~~~~~~~sDvwSfGvil~ell~~-~~~p~~~~~~~~~~~~i~~~~-----~-~~~~~~~~~~~~~li~~cl~~dP~~RP  271 (309)
T d1fvra_         199 NYSVYTTNSDVWSYGVLLWEIVSL-GGTPYCGMTCAELYEKLPQGY-----R-LEKPLNCDDEVYDLMRQCWREKPYERP  271 (309)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHTT-SCCTTTTCCHHHHHHHGGGTC-----C-CCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCCCccceeehhHHHHHHHHhc-CCCCCCCCCHHHHHHHHHhcC-----C-CCCCccCCHHHHHHHHHHcCCChhHCc
Confidence            988999999999999999999953 467898888888777765432     1 122245688999999999999999999


Q ss_pred             CHHHHHHHHHhccCC
Q psy4332         167 SFTEIHLFLQRKNLG  181 (188)
Q Consensus       167 s~~el~~~l~~~~~~  181 (188)
                      |++|++..|+++.+.
T Consensus       272 s~~eil~~L~~i~~~  286 (309)
T d1fvra_         272 SFAQILVSLNRMLEE  286 (309)
T ss_dssp             CHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999888877543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=212.98  Aligned_cols=155  Identities=28%  Similarity=0.492  Sum_probs=123.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..++.+++.|+.|+|+++|+|+||||        +||+++.++.+|++|||+++.....     .....++..|+|||.+
T Consensus       106 ~~i~~~i~~al~ylH~~~ivH~dlkp--------~Nil~~~~~~~kl~dfg~s~~~~~~-----~~~~~~~~~y~aPE~l  172 (262)
T d1byga_         106 LKFSLDVCEAMEYLEGNNFVHRDLAA--------RNVLVSEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEAL  172 (262)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTSCEEECCCCC-----------------CCTTTSCHHHH
T ss_pred             HHHHHHHHhhccccccCceeccccch--------HhheecCCCCEeecccccceecCCC-----CccccccccCCChHHH
Confidence            45688999999999999999999999        9999999999999999998765432     2234567789999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||||+++|||+| .+..||......+....+....     ... .....++++.+++.+||+.||++||
T Consensus       173 ~~~~~t~~sDIwSfG~il~el~t-~~~~p~~~~~~~~~~~~i~~~~-----~~~-~~~~~~~~~~~li~~cl~~dP~~Rp  245 (262)
T d1byga_         173 REKKFSTKSDVWSFGILLWEIYS-FGRVPYPRIPLKDVVPRVEKGY-----KMD-APDGCPPAVYEVMKNCWHLDAAMRP  245 (262)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHT-TSCCSCTTSCGGGHHHHHTTTC-----CCC-CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             hCCCCChHHHHHhHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHcCC-----CCC-CCccCCHHHHHHHHHHcccCHhHCc
Confidence            98899999999999999999996 3678888887777776664321     112 2245678999999999999999999


Q ss_pred             CHHHHHHHHHhccCC
Q psy4332         167 SFTEIHLFLQRKNLG  181 (188)
Q Consensus       167 s~~el~~~l~~~~~~  181 (188)
                      |+.++++.|+++++.
T Consensus       246 s~~~l~~~L~~i~~~  260 (262)
T d1byga_         246 SFLQLREQLEHIKTH  260 (262)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhC
Confidence            999999999988653

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-35  Score=217.11  Aligned_cols=164  Identities=21%  Similarity=0.285  Sum_probs=128.6

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+++.|+.|+|++||+||||||        +||+++.++.+||+|||+++......  .......+|+.|+|||.+
T Consensus       105 ~~~~~qil~~L~yLH~~~IiHrDiKp--------eNIl~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~apE~~  174 (298)
T d1gz8a_         105 KSYLFQLLQGLAFCHSHRVLHRDLKP--------QNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEIL  174 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECSTTHHHHHCCCS--BCTTCCBCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCEEccccCc--------hheeecccCcceeccCCcceeccCCc--ccceeecccceeeehhhh
Confidence            35678899999999999999999999        99999999999999999987664433  233455688999999998


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCccc------------C----------CC
Q psy4332          87 RLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIY------------L----------PT  143 (188)
Q Consensus        87 ~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------~----------~~  143 (188)
                      .... .+.++||||+||++|+|+  +|..||.+.+..+....+............            .          ..
T Consensus       175 ~~~~~~~~~~DiwSlGvily~m~--~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (298)
T d1gz8a_         175 LGCKYYSTAVDIWSLGCIFAEMV--TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV  252 (298)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHS
T ss_pred             ccccCCCccccccccchhhhHHh--hCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhc
Confidence            7655 578999999999999999  567999988876666554322111111000            0          01


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGY  182 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~  182 (188)
                      +..+.++.+|+.+||..||++|||++|+  |+||++++.+.
T Consensus       253 ~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p~  293 (298)
T d1gz8a_         253 PPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV  293 (298)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCCC
Confidence            2456789999999999999999999999  88999998773

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-34  Score=215.71  Aligned_cols=157  Identities=28%  Similarity=0.524  Sum_probs=128.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      .++.+|+.|+.|||+++|+||||||        +||+++.++.+|++|||.++...............+|+.|+|||.+.
T Consensus       149 ~~~~qi~~gl~~LH~~~ivHrDLKp--------~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  220 (311)
T d1t46a_         149 SFSYQVAKGMAFLASKNCIHRDLAA--------RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeeccccc--------ccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence            4678999999999999999999999        99999999999999999998876555444555667899999999999


Q ss_pred             cCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCCC
Q psy4332          88 LRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERPS  167 (188)
Q Consensus        88 ~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps  167 (188)
                      +..++.++||||||+++|||+|+ |..+|.+....+....+.....    . .......+.++.+|+.+||+.||++|||
T Consensus       221 ~~~~~~~~DIwS~G~~l~ellt~-g~p~~~~~~~~~~~~~~i~~~~----~-~~~~~~~~~~l~~Li~~cl~~dP~~RPs  294 (311)
T d1t46a_         221 NCVYTFESDVWSYGIFLWELFSL-GSSPYPGMPVDSKFYKMIKEGF----R-MLSPEHAPAEMYDIMKTCWDADPLKRPT  294 (311)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTT-TCCSSTTCCSSHHHHHHHHHTC----C-CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCcccccchHHHHHHHHhC-CCCCCCCCCHHHHHHHHHhcCC----C-CCCcccccHHHHHHHHHHcCCChhHCcC
Confidence            88999999999999999999963 5667766655444444432211    1 1122456789999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy4332         168 FTEIHLFLQRK  178 (188)
Q Consensus       168 ~~el~~~l~~~  178 (188)
                      ++++++.|+++
T Consensus       295 ~~~il~~L~~~  305 (311)
T d1t46a_         295 FKQIVQLIEKQ  305 (311)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.1e-35  Score=214.41  Aligned_cols=155  Identities=22%  Similarity=0.292  Sum_probs=127.8

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+|+.|+.|+|++||+||||||        +||+++.++.+||+|||+++......   ......||+.|++||.+
T Consensus       113 ~~~~~qi~~al~~lH~~~ivHrDlkp--------~Nill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~~PE~~  181 (277)
T d1phka_         113 RKIMRALLEVICALHKLNIVHRDLKP--------ENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEII  181 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSG--------GGEEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccc--------ceEEEcCCCCeEEccchheeEccCCC---ceeeeeccCCCCCHHHh
Confidence            45678899999999999999999999        99999999999999999998775432   23456689999999998


Q ss_pred             hc------CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhcc
Q psy4332          87 RL------RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKR  160 (188)
Q Consensus        87 ~~------~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  160 (188)
                      .+      ..++.++||||+||++|+|+  +|..||.+.........+......   ........+++++.+++.+||+.
T Consensus       182 ~~~~~~~~~~~~~~~DiwslGvilyeml--~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~  256 (277)
T d1phka_         182 ECSMNDNHPGYGKEVDMWSTGVIMYTLL--AGSPPFWHRKQMLMLRMIMSGNYQ---FGSPEWDDYSDTVKDLVSRFLVV  256 (277)
T ss_dssp             HHHHCTTSCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHTCCC---CCTTTGGGSCHHHHHHHHHHCCS
T ss_pred             hccccccCCCCCchheEcccchhhhhhc--cCCCCCCCCCHHHHHHHHHhCCCC---CCCcccccCCHHHHHHHHHHccC
Confidence            64      23577999999999999999  567999999887777776654321   12222346788999999999999


Q ss_pred             CCCCCCCHHHH--HHHHHh
Q psy4332         161 SPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       161 dp~~Rps~~el--~~~l~~  177 (188)
                      ||++|||++|+  |+||++
T Consensus       257 ~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         257 QPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             SGGGSCCHHHHTTSGGGCT
T ss_pred             ChhHCcCHHHHHcCHHHHH
Confidence            99999999999  788875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=214.99  Aligned_cols=162  Identities=28%  Similarity=0.540  Sum_probs=124.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCCccccchh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLPIRWMAWE   84 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~Pe   84 (188)
                      ..++.+++.|+.|+|+++|+||||||        .|||++.++.+||+|||+++.........  ......+|..|+|||
T Consensus       133 ~~i~~qia~gL~~lH~~~iiHrDLK~--------~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  204 (311)
T d1r0pa_         133 IGFGLQVAKGMKFLASKKFVHRDLAA--------RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE  204 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSG--------GGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHH
T ss_pred             HHHHHHHHHhhhhhcccCcccCCccH--------HhEeECCCCCEEEecccchhhccccccccceecccccccccccChH
Confidence            35778999999999999999999999        99999999999999999998765432211  223355788999999


Q ss_pred             hhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCC-CCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCC
Q psy4332          85 SVRLRKFTTKSDVWSFGVTLWEILNLARHRPYE-GLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPT  163 (188)
Q Consensus        85 ~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~  163 (188)
                      .+.+..++.++||||||+++||++|+  ..||. .....+....+....     .. ......++++.+++.+||+.||+
T Consensus       205 ~~~~~~~~~ksDI~SfGivl~El~t~--~~p~~~~~~~~~~~~~i~~g~-----~~-~~p~~~~~~l~~li~~cl~~dP~  276 (311)
T d1r0pa_         205 SLQTQKFTTKSDVWSFGVLLWELMTR--GAPPYPDVNTFDITVYLLQGR-----RL-LQPEYCPDPLYEVMLKCWHPKAE  276 (311)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTT--SCCSCC------CHHHHHTTC-----CC-CCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHhcCCCCChhHhhhhHHHHHHHHHC--CCCCCCCCCHHHHHHHHHcCC-----CC-CCcccCcHHHHHHHHHHcCCCHh
Confidence            99999999999999999999999953  34444 434444444443321     11 12245678999999999999999


Q ss_pred             CCCCHHHHHHHHHhccCCCCC
Q psy4332         164 ERPSFTEIHLFLQRKNLGYVP  184 (188)
Q Consensus       164 ~Rps~~el~~~l~~~~~~~~~  184 (188)
                      +||++.||++.|+++.+.+..
T Consensus       277 ~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         277 MRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             GSCCHHHHHHHHHHHHHTCCS
T ss_pred             HCcCHHHHHHHHHHHHHhhhh
Confidence            999999999999988665443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.9e-35  Score=212.64  Aligned_cols=160  Identities=18%  Similarity=0.231  Sum_probs=122.9

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcc-ccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDY-YRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~   86 (188)
                      .++.+|+.|+.|+|++||+||||||        +||+++.++..+++|||.+........ ........||+.|+|||++
T Consensus       115 ~i~~qi~~al~~lH~~~iiHrDiKP--------~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  186 (277)
T d1o6ya_         115 EVIADACQALNFSHQNGIIHRDVKP--------ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA  186 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEETTSCEEECCCTTCEECC----------------TTCCHHHH
T ss_pred             HHHHHHHHHHHHHHhCCccCccccC--------cccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHH
Confidence            4677899999999999999999999        999999999999999998766543322 1233456689999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCCC
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTERP  166 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  166 (188)
                      .+..++.++||||+||++|+|+  +|..||.+....+...++.....   ..........++++.+++.+||+.||++||
T Consensus       187 ~~~~~~~~~DiwSlGvilyell--tG~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~l~~li~~~L~~dp~~R~  261 (277)
T d1o6ya_         187 RGDSVDARSDVYSLGCVLYEVL--TGEPPFTGDSPVSVAYQHVREDP---IPPSARHEGLSADLDAVVLKALAKNPENRY  261 (277)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHCCC---CCGGGTSSSCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCCCcceecccchHHHHHHH--hCCCCCCCcCHHHHHHHHHhcCC---CCCchhccCCCHHHHHHHHHHccCCHhHCH
Confidence            9888999999999999999999  56789999887777666554322   122223356789999999999999999999


Q ss_pred             -CHHHHHHHHHhccC
Q psy4332         167 -SFTEIHLFLQRKNL  180 (188)
Q Consensus       167 -s~~el~~~l~~~~~  180 (188)
                       |++++...|.++.+
T Consensus       262 ~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         262 QTAAEMRADLVRVHN  276 (277)
T ss_dssp             SSHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHhC
Confidence             89999777777654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-35  Score=221.88  Aligned_cols=161  Identities=18%  Similarity=0.275  Sum_probs=121.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCccccccCCCCCCccccch
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAW   83 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~P   83 (188)
                      +.++.+|+.|+.|+|++||+||||||        +||+++.   .+.+||+|||+++......   ......||+.|+||
T Consensus       114 ~~i~~qi~~al~ylH~~~iiHRDiKp--------~NIll~~~~~~~~~Kl~DFG~a~~~~~~~---~~~~~~gt~~y~aP  182 (335)
T d2ozaa1         114 SEIMKSIGEAIQYLHSINIAHRDVKP--------ENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAP  182 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEESCSSTTCCEEECCCTTCEECCCCC---CCCCCSCCCSSCCC
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccc--------cccccccccccccccccccceeeeccCCC---ccccccCCcccCCc
Confidence            34567899999999999999999999        9999985   4579999999988765432   33456789999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC-CcccCCCCCChHHHHHHHHHHhccCC
Q psy4332          84 ESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG-EFIYLPTPQTTKDILDLMNECWKRSP  162 (188)
Q Consensus        84 e~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~dp  162 (188)
                      |++.+..++.++||||+||++|+|+  +|..||.+.........+........ .........+++++.+|+.+||+.||
T Consensus       183 E~~~~~~y~~~~DiwSlGvily~ll--tg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  260 (335)
T d2ozaa1         183 EVLGPEKYDKSCDMWSLGVIMYILL--CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP  260 (335)
T ss_dssp             CCCCGGGGSHHHHHHHHHHHHHHHT--TSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSST
T ss_pred             HHHcCCCCCHHHHHHhhchhHHHHh--hCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCCh
Confidence            9999888999999999999999999  67899987654443333222111111 11111112467899999999999999


Q ss_pred             CCCCCHHHH--HHHHHhccC
Q psy4332         163 TERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       163 ~~Rps~~el--~~~l~~~~~  180 (188)
                      ++|||+.|+  |+||++...
T Consensus       261 ~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         261 TQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             TTSCCHHHHHHSHHHHTTTS
T ss_pred             hHCcCHHHHHcCHHhhCCCC
Confidence            999999999  788876443

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-35  Score=213.45  Aligned_cols=145  Identities=21%  Similarity=0.348  Sum_probs=116.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+|+.|+.|+|++||+||||||        +||+++.+ +.+||+|||+++.....    ......||+.|+|||++
T Consensus       114 ~~~~qi~~al~~lH~~~iiHrDiKp--------~NIll~~~~~~vkl~DFG~a~~~~~~----~~~~~~GT~~y~aPE~~  181 (273)
T d1xwsa_         114 SFFWQVLEAVRHCHNCGVLHRDIKD--------ENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWI  181 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSG--------GGEEEETTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccccCcc--------cceEEecCCCeEEECccccceecccc----cccccccCCCcCCHHHH
Confidence            4567899999999999999999999        99999854 79999999998765433    23456789999999999


Q ss_pred             hcCCC-CChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          87 RLRKF-TTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        87 ~~~~~-~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      .+..+ +.++||||+||++|+|+|  |..||.+..  ..    ....       ......+++++.+++.+||..||++|
T Consensus       182 ~~~~~~~~~~DiwSlGvilyell~--g~~Pf~~~~--~i----~~~~-------~~~~~~~s~~~~~li~~~L~~dp~~R  246 (273)
T d1xwsa_         182 RYHRYHGRSAAVWSLGILLYDMVC--GDIPFEHDE--EI----IRGQ-------VFFRQRVSSECQHLIRWCLALRPSDR  246 (273)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHH--SSCSCCSHH--HH----HHCC-------CCCSSCCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCCCCCcccccccceeeehhHhh--CCCCCCCch--HH----hhcc-------cCCCCCCCHHHHHHHHHHccCCHhHC
Confidence            87765 567999999999999994  678987632  21    1111       11224578899999999999999999


Q ss_pred             CCHHHH--HHHHHhcc
Q psy4332         166 PSFTEI--HLFLQRKN  179 (188)
Q Consensus       166 ps~~el--~~~l~~~~  179 (188)
                      ||++|+  |+||+++.
T Consensus       247 ~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         247 PTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             CCHHHHHTSGGGSSCC
T ss_pred             cCHHHHhcCHhhCCCC
Confidence            999999  78998653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-34  Score=213.59  Aligned_cols=161  Identities=20%  Similarity=0.244  Sum_probs=125.5

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcc-eEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKF-EIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      ..+.+|+.|+.|||++||+||||||        +|||++.++ .+||+|||++.......   ......++..|+|||.+
T Consensus       126 ~i~~qil~aL~yLH~~~IiHrDiKp--------~NILl~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~  194 (350)
T d1q5ka_         126 LYMYQLFRSLAYIHSFGICHRDIKP--------QNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELI  194 (350)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCG--------GGEEECTTTCCEEECCCTTCEECCTTS---CCCSCCSCTTSCCHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCCc--------ceEEEecCCCceeEecccchhhccCCc---ccccccccccccChHHh
Confidence            4577999999999999999999999        999999775 79999999988765432   22345678899999988


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC----------------------CCcccCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD----------------------GEFIYLPT  143 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~  143 (188)
                      .+. .++.++||||+||++||++  +|..||......+....+.......                      ........
T Consensus       195 ~~~~~~~~~~DIwSlG~il~el~--~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (350)
T d1q5ka_         195 FGATDYTSSIDVWSAGCVLAELL--LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR  272 (350)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHH--HTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSC
T ss_pred             hcccCCCcceeecccceEEEehh--hCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcc
Confidence            754 6899999999999999999  4678998877666555443211110                      00011123


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      +..++++.+|+.+||..||++|||+.|+  |+||+++...
T Consensus       273 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~  312 (350)
T d1q5ka_         273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP  312 (350)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCC
Confidence            4567899999999999999999999999  7899988653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.8e-34  Score=209.43  Aligned_cols=159  Identities=18%  Similarity=0.234  Sum_probs=120.4

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+|+.|+.|||++||+||||||        +||+++.++.+|++|||.+........  ......+++.|++||.+
T Consensus       103 ~~i~~qi~~~L~~LH~~~IvHrDiKp--------~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~~~y~~pE~~  172 (286)
T d1ob3a_         103 KSFLLQLLNGIAYCHDRRVLHRDLKP--------QNLLINREGELKIADFGLARAFGIPVR--KYTHEIVTLWYRAPDVL  172 (286)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHhccCcEEecCCCC--------ceeeEcCCCCEEecccccceecccCcc--ccceecccchhhhHHHH
Confidence            35678899999999999999999999        999999999999999999876544321  22344577889999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc----------------------ccCCC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF----------------------IYLPT  143 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~  143 (188)
                      .+. .++.++||||+||+++||+  +|..||.+....+...++..........                      .....
T Consensus       173 ~~~~~~~~~~DiwslGv~l~el~--~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (286)
T d1ob3a_         173 MGSKKYSTTIDIWSVGCIFAEMV--NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL  250 (286)
T ss_dssp             TTCCSCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTC
T ss_pred             hCCCCCCcceeehhcCcHHHHHH--HCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhc
Confidence            754 4689999999999999999  5679999887776655543211111000                      00112


Q ss_pred             CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHh
Q psy4332         144 PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       144 ~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~  177 (188)
                      ...+.++.+|+.+||+.||++|||++|+  |+||++
T Consensus       251 ~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            3457889999999999999999999999  788874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=212.11  Aligned_cols=160  Identities=18%  Similarity=0.212  Sum_probs=125.1

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+|+.|+.|||++||+||||||        +||+++.++.+|++|||+++.....     .....+|+.|+|||.+
T Consensus       124 ~~~~~qi~~aL~~LH~~~IiHrDiKp--------~NIL~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~  190 (346)
T d1cm8a_         124 QFLVYQMLKGLRYIHAAGIIHRDLKP--------GNLAVNEDCELKILDFGLARQADSE-----MTGYVVTRWYRAPEVI  190 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCc--------chhhcccccccccccccceeccCCc-----cccccccccccCHHHH
Confidence            34678899999999999999999999        9999999999999999998776432     2355688899999998


Q ss_pred             hcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCC------------------------CCcccC
Q psy4332          87 RLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADD------------------------GEFIYL  141 (188)
Q Consensus        87 ~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~  141 (188)
                      .+. .++.++||||+||++|+|+  +|..||.+.+...............                        ......
T Consensus       191 ~~~~~~~~~~DiwSlGvil~ell--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (346)
T d1cm8a_         191 LNWMRYTQTVDIWSVGCIMAEMI--TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS  268 (346)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGG
T ss_pred             cCCCCCCccchhhcchHHHHHHH--HCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHH
Confidence            764 4688999999999999999  5678998887665544433211111                        011111


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLG  181 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~  181 (188)
                      .....++++.+|+.+||..||++|||++|+  |+||+++...
T Consensus       269 ~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         269 ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  310 (346)
T ss_dssp             TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             hccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence            124557889999999999999999999999  8899987543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=210.07  Aligned_cols=160  Identities=18%  Similarity=0.199  Sum_probs=122.2

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccc--cccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYY--RVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.++.+|++|||++.........  .......+|+.|+|||.
T Consensus       121 ~i~~qil~~l~~lH~~~ivHrDlKp--------~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~  192 (318)
T d3blha1         121 RVMQMLLNGLYYIHRNKILHRDMKA--------ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL  192 (318)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHhccCCEEecCcCc--------hheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHH
Confidence            4567899999999999999999999        9999999999999999998766533221  12234568999999999


Q ss_pred             hhcC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCC----------------C-----
Q psy4332          86 VRLR-KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLP----------------T-----  143 (188)
Q Consensus        86 ~~~~-~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-----  143 (188)
                      +.+. .++.++||||+||++|+|+  +|..||.+.........+..............                .     
T Consensus       193 ~~~~~~~~~k~DiwSlGvil~el~--~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T d3blha1         193 LLGERDYGPPIDLWGAGCIMAEMW--TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD  270 (318)
T ss_dssp             HTTCSSCCTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHH
T ss_pred             HcCCCCCCcHHHcccCCceeeeHh--hCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchh
Confidence            8755 5889999999999999999  46799998887776655543222211110000                0     


Q ss_pred             ----CCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHh
Q psy4332         144 ----PQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQR  177 (188)
Q Consensus       144 ----~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~  177 (188)
                          ...+.++.+|+.+||+.||++|||++|+  |+||+.
T Consensus       271 ~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         271 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             HHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             hhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence                0124567899999999999999999999  889974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-34  Score=213.05  Aligned_cols=155  Identities=17%  Similarity=0.277  Sum_probs=126.7

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCc--ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK--FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      .++.+|+.|+.|||++||+||||||        +||+++.+  ..+||+|||++.......   ......+++.|++||.
T Consensus       106 ~i~~qi~~al~yLH~~~iiHrDlKp--------~NIll~~~~~~~ikl~DFG~~~~~~~~~---~~~~~~~t~~y~ape~  174 (321)
T d1tkia_         106 SYVHQVCEALQFLHSHNIGHFDIRP--------ENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEV  174 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCG--------GGEEESSSSCCCEEECCCTTCEECCTTC---EEEEEESCGGGSCHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccc--------cceeecCCCceEEEEcccchhhccccCC---cccccccccccccchh
Confidence            3567899999999999999999999        99999854  479999999987764432   2234457788999999


Q ss_pred             hhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          86 VRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        86 ~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.+..++.++||||+||++|+|+  +|..||.+....+....+.........   ...+.++.++.+|+.+||+.||++|
T Consensus       175 ~~~~~~~~~~DiWSlGvily~ll--~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T d1tkia_         175 HQHDVVSTATDMWSLGTLVYVLL--SGINPFLAETNQQIIENIMNAEYTFDE---EAFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             HTTCEECHHHHHHHHHHHHHHHH--HSSCTTCCSSHHHHHHHHHHTCCCCCH---HHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             ccCCCCCchhhcccHHHHHHHHH--hCCCCCCCCCHHHHHHHHHhCCCCCCh---hhccCCCHHHHHHHHHHccCChhHC
Confidence            99888999999999999999999  568999999888888777654322211   1123568899999999999999999


Q ss_pred             CCHHHH--HHHHHhc
Q psy4332         166 PSFTEI--HLFLQRK  178 (188)
Q Consensus       166 ps~~el--~~~l~~~  178 (188)
                      ||++|+  |+||++.
T Consensus       250 ~s~~eil~hp~~~~~  264 (321)
T d1tkia_         250 MTASEALQHPWLKQK  264 (321)
T ss_dssp             CCHHHHHHSHHHHSC
T ss_pred             cCHHHHhcCHhhccC
Confidence            999999  7899753

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-33  Score=210.99  Aligned_cols=164  Identities=20%  Similarity=0.199  Sum_probs=124.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc-ccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR-VHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~   85 (188)
                      +.++.+++.|+.|+|++||+||||||        +|||++.++.+||+|||++.......... ......+++.|+|||.
T Consensus       112 ~~i~~qil~al~yLH~~~iiHRDIKp--------~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (345)
T d1pmea_         112 CYFLYQILRGLKYIHSANVLHRDLKP--------SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI  183 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCG--------GGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGG
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCCc--------ceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHH
Confidence            34678899999999999999999999        99999999999999999987765443222 2244568899999999


Q ss_pred             hhc-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCC------------------------Cccc
Q psy4332          86 VRL-RKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDG------------------------EFIY  140 (188)
Q Consensus        86 ~~~-~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~  140 (188)
                      +.. ..++.++||||+||++|+|+  .|..||.+....+.............                        ....
T Consensus       184 l~~~~~~~~~~DiwSlG~il~eml--~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (345)
T d1pmea_         184 MLNSKGYTKSIDIWSVGCILAEML--SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN  261 (345)
T ss_dssp             TTTBCSCSTHHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH
T ss_pred             hhcCCCCCchhhhhccCceehHHh--hCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHH
Confidence            854 45788999999999999999  45789988765544433321111110                        0000


Q ss_pred             CCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccC
Q psy4332         141 LPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNL  180 (188)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~  180 (188)
                      ...+..+.++.+|+.+||+.||++|||++|+  |+||++...
T Consensus       262 ~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence            0123456789999999999999999999999  788986644

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=1.6e-33  Score=208.21  Aligned_cols=161  Identities=15%  Similarity=0.176  Sum_probs=118.1

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC---cceEEEccCCCCccCCCCcc-----ccccCCCCCCcc
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK---KFEIKISDFATDSDMFSSDY-----YRVHDNTSLPIR   79 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~---~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~   79 (188)
                      .++.+++.|+.|+|++||+||||||        +||+++.   +..++++|||+++.......     ........||+.
T Consensus       107 ~~~~qi~~~l~~lH~~~iiHrDiKp--------~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  178 (299)
T d1ckia_         107 LLADQMISRIEYIHSKNFIHRDVKP--------DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  178 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCG--------GGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSS
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCH--------hhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCcc
Confidence            4567899999999999999999999        9998764   34699999999987654322     122345568999


Q ss_pred             ccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCC-CCCcccCCCCCChHHHHHHHHHHh
Q psy4332          80 WMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHAD-DGEFIYLPTPQTTKDILDLMNECW  158 (188)
Q Consensus        80 ~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl  158 (188)
                      |+|||.+.+..++.++||||||+++||++  +|..||.+.........+...... ...........+++++.+++.+||
T Consensus       179 y~aPE~~~~~~~~~~~DiwSlG~~l~el~--tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl  256 (299)
T d1ckia_         179 YASINTHLGIEQSRRDDLESLGYVLMYFN--LGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  256 (299)
T ss_dssp             SCCHHHHTTBCCCHHHHHHHHHHHHHHHH--HSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             ccCHHHHhCCCCCChhhEEecCHHHHHHH--hCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHc
Confidence            99999999888999999999999999999  567899876543332222110000 000001112456789999999999


Q ss_pred             ccCCCCCCCHHHHHHHHHhc
Q psy4332         159 KRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       159 ~~dp~~Rps~~el~~~l~~~  178 (188)
                      ..+|++||+++++.+.|+++
T Consensus       257 ~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         257 SLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HSCTTCCCCHHHHHHHHHHH
T ss_pred             cCChhHCcCHHHHHHHHHHH
Confidence            99999999999997777754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.6e-33  Score=208.46  Aligned_cols=163  Identities=18%  Similarity=0.138  Sum_probs=114.1

Q ss_pred             ccccchhhhhhhhcc--------cccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCcccc--ccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNK--------NGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYR--VHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~--------~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~   77 (188)
                      ..+.+++.++.|+|+        +||+||||||        +|||++.++.+||+|||+++.........  ......||
T Consensus       104 ~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp--------~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt  175 (303)
T d1vjya_         104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS--------KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             HHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCG--------GGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSC
T ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCeeccccCc--------cceEEcCCCCeEEEecCccccccCCCcceeccccceecc
Confidence            466788899999985        6999999999        99999999999999999988765433221  22346689


Q ss_pred             ccccchhhhhcCC------CCChhhHHHHHHHHHHHHhCCCCCCCCC---------------CCHHHHHHHhhcccCCCC
Q psy4332          78 IRWMAWESVRLRK------FTTKSDVWSFGVTLWEILNLARHRPYEG---------------LTDLEVLENISHLHADDG  136 (188)
Q Consensus        78 ~~~~~Pe~~~~~~------~~~~~di~slG~~~~~l~t~~~~~p~~~---------------~~~~~~~~~~~~~~~~~~  136 (188)
                      ++|+|||++.+..      ++.++|||||||++||++|+  ..||..               ................+.
T Consensus       176 ~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  253 (303)
T d1vjya_         176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR--CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN  253 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT--BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC
T ss_pred             cCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhC--CCCCCcccccccchhhcccccchHHHHHHHHhccccCCC
Confidence            9999999987542      45689999999999999964  344321               111222222221111111


Q ss_pred             CcccCCCCCChHHHHHHHHHHhccCCCCCCCHHHHHHHHHhccC
Q psy4332         137 EFIYLPTPQTTKDILDLMNECWKRSPTERPSFTEIHLFLQRKNL  180 (188)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el~~~l~~~~~  180 (188)
                      .............+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus       254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            11111112234568999999999999999999999999998854

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.5e-33  Score=206.71  Aligned_cols=158  Identities=21%  Similarity=0.266  Sum_probs=119.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhhh
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESVR   87 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~   87 (188)
                      ..+.+|+.|+.|+|+++|+||||||        +||+++.++.+||+|||+++.+..... .......+++.|++||.+.
T Consensus       133 ~~~~Qi~~al~~lH~~~ivHrDiKp--------~Nill~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~g~~~~~~pe~~~  203 (322)
T d1vzoa_         133 IYVGEIVLALEHLHKLGIIYRDIKL--------ENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVR  203 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTSCEEESCSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHT
T ss_pred             HHHHHHHHHHHHhhcCCEEeccCCc--------cceeecCCCCEEEeeccchhhhccccc-ccccccccccccchhHHhh
Confidence            3467899999999999999999999        999999999999999999877643322 2334556888999999997


Q ss_pred             cC--CCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcccCCCCCChHHHHHHHHHHhccCCCCC
Q psy4332          88 LR--KFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFIYLPTPQTTKDILDLMNECWKRSPTER  165 (188)
Q Consensus        88 ~~--~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R  165 (188)
                      +.  .++.++||||+||++|+|+  +|..||.+.........+.......   ........++++.+++.+||+.||++|
T Consensus       204 ~~~~~~~~ksDIWSlG~iLyell--tG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~l~~dP~~R  278 (322)
T d1vzoa_         204 GGDSGHDKAVDWWSLGVLMYELL--TGASPFTVDGEKNSQAEISRRILKS---EPPYPQEMSALAKDLIQRLLMKDPKKR  278 (322)
T ss_dssp             TCC---CTHHHHHHHHHHHHHHH--HSSCTTSCTTSCCCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCcCCCchhhhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcccC---CCCCcccCCHHHHHHHHHHcccCHHHc
Confidence            54  3677999999999999999  4678997764333322222211101   111124578899999999999999999


Q ss_pred             CC-----HHHH--HHHHHhcc
Q psy4332         166 PS-----FTEI--HLFLQRKN  179 (188)
Q Consensus       166 ps-----~~el--~~~l~~~~  179 (188)
                      ||     ++|+  |+||++++
T Consensus       279 ~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         279 LGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             TTSSTTTHHHHHTSGGGTTCC
T ss_pred             CCCCcccHHHHHcCHhhcCCC
Confidence            94     7899  78998754

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.6e-32  Score=199.18  Aligned_cols=160  Identities=21%  Similarity=0.224  Sum_probs=121.2

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+++.|+.|+|++||+||||||        +||+++.++.+|++|||.++.......  ......++..|+|||.+
T Consensus       104 ~~~~~q~~~aL~~lH~~~IvHrDiKP--------~NIli~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~~~pe~~  173 (292)
T d1unla_         104 KSFLFQLLKGLGFCHSRNVLHRDLKP--------QNLLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVL  173 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEECTTCCEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCEeeecccC--------cccccccCCceeeeecchhhcccCCCc--cceeeccccchhhhhHh
Confidence            35677899999999999999999999        999999999999999999987754432  22344567789999998


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHhCCCCCCC-CCCCHHHHHHHhhcccCCCCC----------------------cccCC
Q psy4332          87 RLRK-FTTKSDVWSFGVTLWEILNLARHRPY-EGLTDLEVLENISHLHADDGE----------------------FIYLP  142 (188)
Q Consensus        87 ~~~~-~~~~~di~slG~~~~~l~t~~~~~p~-~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~  142 (188)
                      .+.. ++.++||||+||++|+|+  +|..|| .+.+..+....+.........                      .....
T Consensus       174 ~~~~~~~~~~DiwSlG~il~ell--~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (292)
T d1unla_         174 FGAKLYSTSIDMWSAGCIFAELA--NAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV  251 (292)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHT--TTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTT
T ss_pred             ccCCCCCchhhccccchHHHHHh--hCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhc
Confidence            7654 689999999999999999  455664 455555555544322111100                      01111


Q ss_pred             CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         143 TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                      ....++++.+|+.+||+.||++|||++|+  |+||++.
T Consensus       252 ~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence            23457889999999999999999999999  8899753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.3e-32  Score=205.07  Aligned_cols=164  Identities=17%  Similarity=0.166  Sum_probs=124.0

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +.++.+|+.|+.|||++||+||||||        +||+++.++.+|++|||++.....     ......+++.|+|||.+
T Consensus       124 ~~i~~qil~aL~~LH~~giiHrDiKp--------~NILi~~~~~~kl~dfg~a~~~~~-----~~~~~~g~~~y~apE~~  190 (348)
T d2gfsa1         124 QFLIYQILRGLKYIHSADIIHRDLKP--------SNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIM  190 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCG--------GGEEECTTCCEEECCC----CCTG-----GGSSSCHHHHTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCC--------ccccccccccccccccchhcccCc-----ccccccccccccCchhh
Confidence            34578899999999999999999999        999999999999999999866532     23456688899999987


Q ss_pred             hcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCcc-----------------c-------C
Q psy4332          87 RLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEFI-----------------Y-------L  141 (188)
Q Consensus        87 ~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-------~  141 (188)
                      .+.. .+.++||||+||++|+|+  +|..||.+.+.......+...........                 .       .
T Consensus       191 ~~~~~~~~~~DiwSlGv~l~~ll--~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (348)
T d2gfsa1         191 LNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN  268 (348)
T ss_dssp             TTCSCCCTTHHHHHHHHHHHHHH--HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHH
T ss_pred             cCCccCCcccchhhhhHHHHHHH--hCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhh
Confidence            7654 688999999999999999  56799998876665555433222111100                 0       0


Q ss_pred             CCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhccCCCCCC
Q psy4332         142 PTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKNLGYVPP  185 (188)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~~~~~~~  185 (188)
                      .....++++.+|+.+||+.||++|||++|+  |+||++......+|
T Consensus       269 ~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~~  314 (348)
T d2gfsa1         269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP  314 (348)
T ss_dssp             HSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSCC
T ss_pred             hcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccCC
Confidence            113457889999999999999999999999  88999876544433

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=2.7e-32  Score=201.01  Aligned_cols=159  Identities=16%  Similarity=0.179  Sum_probs=119.6

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcC-----cceEEEccCCCCccCCCCcc-----ccccCCCCCC
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGK-----KFEIKISDFATDSDMFSSDY-----YRVHDNTSLP   77 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~-----~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~   77 (188)
                      .++.+++.++.|+|++||+||||||        +||+++.     .+.+||+|||+++.......     ........||
T Consensus       105 ~i~~q~~~~l~~lH~~giiHrDiKp--------~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT  176 (293)
T d1csna_         105 MAAKQMLARVQSIHEKSLVYRDIKP--------DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT  176 (293)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCG--------GGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCc--------cceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEc
Confidence            4677888999999999999999999        9999964     56799999999987653321     1223345689


Q ss_pred             ccccchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCC---HHHHHHHhhcccCCCCCcccCCCCCChHHHHHHH
Q psy4332          78 IRWMAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLT---DLEVLENISHLHADDGEFIYLPTPQTTKDILDLM  154 (188)
Q Consensus        78 ~~~~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  154 (188)
                      +.|+|||.+.+..++.++||||+|+++|+++  +|..||.+..   .......+.........  ......+++++.+++
T Consensus       177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~ell--tg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~p~~l~~ii  252 (293)
T d1csna_         177 ARYMSINTHLGREQSRRDDLEALGHVFMYFL--RGSLPWQGLKAATNKQKYERIGEKKQSTPL--RELCAGFPEEFYKYM  252 (293)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH--HSSCTTSSCCSCCHHHHHHHHHHHHHHSCH--HHHTTTSCHHHHHHH
T ss_pred             hhhcCHHHhcCCCCChHHHHHHhhHHHHHHH--hCCCcCCCccchhHHHHHHHHHhccCCCCh--HHhcCCCCHHHHHHH
Confidence            9999999999888999999999999999999  4678997643   22222222221111110  011245678999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhc
Q psy4332         155 NECWKRSPTERPSFTEIHLFLQRK  178 (188)
Q Consensus       155 ~~cl~~dp~~Rps~~el~~~l~~~  178 (188)
                      ..|+..+|++||+++.+.+.|+++
T Consensus       253 ~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         253 HYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHhcCCcccCcCHHHHHHHHHHH
Confidence            999999999999999987666654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=7.9e-32  Score=201.49  Aligned_cols=160  Identities=14%  Similarity=0.179  Sum_probs=118.3

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCc-ceEEEccCCCCccCCCCccccccCCCCCCccccchhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKK-FEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWES   85 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~   85 (188)
                      +.++.+|+.|+.|||++||+||||||        +|||++.+ +.+||+|||++.......   ......+|+.|+|||.
T Consensus       132 ~~i~~qil~aL~~LH~~gIvHrDiKp--------~NILi~~~~~~vkl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~  200 (328)
T d3bqca1         132 RFYMYEILKALDYCHSMGIMHRDVKP--------HNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPEL  200 (328)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSG--------GGEEEETTTTEEEECCGGGCEECCTTC---CCCSCCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHhhcccccccccc--------cceEEcCCCCeeeecccccceeccCCC---cccccccCccccCccc
Confidence            45678999999999999999999999        99999865 468999999987665432   2345567889999999


Q ss_pred             hhcCC-CCChhhHHHHHHHHHHHHhCCCCCCCCCCCH-HHHHHHhhccc-------------CCCC-------------C
Q psy4332          86 VRLRK-FTTKSDVWSFGVTLWEILNLARHRPYEGLTD-LEVLENISHLH-------------ADDG-------------E  137 (188)
Q Consensus        86 ~~~~~-~~~~~di~slG~~~~~l~t~~~~~p~~~~~~-~~~~~~~~~~~-------------~~~~-------------~  137 (188)
                      +.+.. ++.++||||+||++++++  .|..||..... ......+....             ....             .
T Consensus       201 ~~~~~~~~~~~DiwslG~~l~e~~--~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (328)
T d3bqca1         201 LVDYQMYDYSLDMWSLGCMLASMI--FRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKR  278 (328)
T ss_dssp             HTTCCCCCTHHHHHHHHHHHHHHH--HTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCC
T ss_pred             ccCCCCCCcccchhhhhhhhHHhc--cCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccc
Confidence            88654 789999999999999999  45678866532 22211111000             0000             0


Q ss_pred             ----cccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhcc
Q psy4332         138 ----FIYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRKN  179 (188)
Q Consensus       138 ----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~~  179 (188)
                          .........+.++.+|+.+||..||++|||++|+  |+||+.+.
T Consensus       279 ~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         279 WERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             GGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             hhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                0001112357889999999999999999999999  88998764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.1e-32  Score=204.10  Aligned_cols=159  Identities=16%  Similarity=0.182  Sum_probs=115.9

Q ss_pred             CccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccchhhh
Q psy4332           7 RPQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMAWESV   86 (188)
Q Consensus         7 ~~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~   86 (188)
                      +..+.+++.|+.|+|++||+||||||        +||+++.++.+|++|||+++......   ......+|+.|+|||.+
T Consensus       122 ~~~~~qil~gl~~LH~~giiHrDlKP--------~Nil~~~~~~~kl~df~~~~~~~~~~---~~~~~~~t~~y~aPE~l  190 (355)
T d2b1pa1         122 SYLLYQMLCGIKHLHSAGIIHRDLKP--------SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVI  190 (355)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCG--------GGEEECTTCCEEECCCCC------------------CCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHhhhcccccccCCc--------cccccccccceeeechhhhhcccccc---ccccccccccccChhhh
Confidence            34678899999999999999999999        99999999999999999977665432   23445678899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHhhcccCCCCCc----------------------------
Q psy4332          87 RLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDLEVLENISHLHADDGEF----------------------------  138 (188)
Q Consensus        87 ~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------------  138 (188)
                      .+..++.++||||+||++++++  .|..||.+.+......++..........                            
T Consensus       191 ~~~~~~~~~DiwSlG~~l~ell--~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (355)
T d2b1pa1         191 LGMGYKENVDIWSVGCIMGEMV--RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF  268 (355)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHH--HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHS
T ss_pred             cCCCCCCCcccccccchHHHHh--hCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccc
Confidence            9888999999999999999999  5678998887665554443211110000                            


Q ss_pred             ---ccCC----CCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         139 ---IYLP----TPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       139 ---~~~~----~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                         ....    ....+.++.+|+.+||..||++|||++|+  |+||++.
T Consensus       269 ~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             CGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence               0000    01125678999999999999999999999  8999864

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.3e-28  Score=186.06  Aligned_cols=156  Identities=17%  Similarity=0.216  Sum_probs=111.7

Q ss_pred             ccccchhhhhhhhcc-cccccccchhhhhccccccceEEcCcc------eEEEccCCCCccCCCCccccccCCCCCCccc
Q psy4332           8 PQASNLAVVPLLRNK-NGVEHSSLKKKCIKIFDFKNCLVGKKF------EIKISDFATDSDMFSSDYYRVHDNTSLPIRW   80 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~-~~i~h~~lk~~~i~~~~~~nill~~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~   80 (188)
                      ....+++.|+.|+|+ .||+||||||        +||+++.++      .++++|||.+......     .....+|+.|
T Consensus       129 ~i~~qil~al~~lh~~~~IvHrDlKp--------~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y  195 (362)
T d1q8ya_         129 QISKQLLLGLDYMHRRCGIIHTDIKP--------ENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREY  195 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECSCCSG--------GGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGG
T ss_pred             HHHHHHHHHHHHHhhhcCcccccCCh--------hHeeeeccCcccccceeeEeecccccccccc-----cccccccccc
Confidence            356788999999997 9999999999        999997654      4899999998765432     2456688999


Q ss_pred             cchhhhhcCCCCChhhHHHHHHHHHHHHhCCCCCCCCCCCHH------HHHHHhhcccCCC-------------------
Q psy4332          81 MAWESVRLRKFTTKSDVWSFGVTLWEILNLARHRPYEGLTDL------EVLENISHLHADD-------------------  135 (188)
Q Consensus        81 ~~Pe~~~~~~~~~~~di~slG~~~~~l~t~~~~~p~~~~~~~------~~~~~~~~~~~~~-------------------  135 (188)
                      +|||.+.+..++.++|+||+||+++++++  |..||......      .............                   
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il~el~~--g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  273 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLIFELIT--GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG  273 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHH--SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred             cChhhccccCCCccccccchHHHHHHHHH--CCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccch
Confidence            99999998889999999999999999994  56788654321      1111111100000                   


Q ss_pred             -CCc---------------ccCCCCCChHHHHHHHHHHhccCCCCCCCHHHH--HHHHHhc
Q psy4332         136 -GEF---------------IYLPTPQTTKDILDLMNECWKRSPTERPSFTEI--HLFLQRK  178 (188)
Q Consensus       136 -~~~---------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~el--~~~l~~~  178 (188)
                       ...               ........+.++.+|+.+||+.||.+|||++|+  |+||++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         274 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             hhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence             000               000011235779999999999999999999999  8899855

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.22  E-value=9.9e-13  Score=89.80  Aligned_cols=75  Identities=19%  Similarity=0.149  Sum_probs=54.8

Q ss_pred             ccccchhhhhhhhcccccccccchhhhhccccccceEEcCcceEEEccCCCCccCCCCccccccCCCCCCccccc-----
Q psy4332           8 PQASNLAVVPLLRNKNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSDMFSSDYYRVHDNTSLPIRWMA-----   82 (188)
Q Consensus         8 ~~~~~~~~~~~~lh~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~-----   82 (188)
                      .++.+++.++.|+|++||+|+|+||        +||+++.++ ++++|||.+.....+...          .|..     
T Consensus       107 ~i~~ql~~~l~~lH~~giiHrDiKP--------~NILv~~~~-~~liDFG~a~~~~~~~~~----------~~l~rd~~~  167 (191)
T d1zara2         107 EVLDMILEEVAKFYHRGIVHGDLSQ--------YNVLVSEEG-IWIIDFPQSVEVGEEGWR----------EILERDVRN  167 (191)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCST--------TSEEEETTE-EEECCCTTCEETTSTTHH----------HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCEEEccCCh--------hheeeeCCC-EEEEECCCcccCCCCCcH----------HHHHHHHHH
Confidence            4567889999999999999999999        999999765 889999998665432210          1111     


Q ss_pred             -hhhhhcCCCCChhhHHHHHH
Q psy4332          83 -WESVRLRKFTTKSDVWSFGV  102 (188)
Q Consensus        83 -Pe~~~~~~~~~~~di~slG~  102 (188)
                       .+.+ ...++.++|+||..-
T Consensus       168 ~~~~f-~r~y~~~~d~~s~~~  187 (191)
T d1zara2         168 IITYF-SRTYRTEKDINSAID  187 (191)
T ss_dssp             HHHHH-HHHHCCCCCHHHHHH
T ss_pred             HHHHH-cCCCCCcccHHHHHH
Confidence             1222 355788899999754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.23  E-value=0.0043  Score=44.01  Aligned_cols=31  Identities=23%  Similarity=0.175  Sum_probs=27.8

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..|++|+|+.+        +|++++.+...-+.||+.+.
T Consensus       182 ~~giIHgDl~~--------dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQ--------DNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCG--------GGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcch--------hhhhcccccceeEecccccc
Confidence            58999999999        99999998777899999764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.76  E-value=0.045  Score=37.05  Aligned_cols=30  Identities=17%  Similarity=-0.054  Sum_probs=25.7

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCC
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATD   59 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~   59 (188)
                      ...++|+|+.|        .||+++.+..+-|.||+.+
T Consensus       174 ~~~liHgD~~~--------~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         174 DLVVTHGDACL--------PNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             CEEEECSSCCG--------GGEEEETTEEEEECCCTTC
T ss_pred             CceEEeCCCCC--------cceEEeCCceEEEEEchhc
Confidence            35689999999        9999998777789999975

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.27  E-value=0.049  Score=37.03  Aligned_cols=31  Identities=16%  Similarity=0.121  Sum_probs=25.9

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ...++|+|+.+        .||+++.++.+-|.||+.+.
T Consensus       182 ~~~l~HgD~~~--------~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         182 ELVFSHGDLGD--------SNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CEEEECSCCCT--------TSEEEETTEEEEECCCTTCE
T ss_pred             CcEEEEeeccC--------cceeecCCceEEEeechhcc
Confidence            45689999999        99999987767799998753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=87.80  E-value=0.15  Score=37.10  Aligned_cols=31  Identities=13%  Similarity=0.066  Sum_probs=25.6

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCcc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDSD   61 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~~   61 (188)
                      ...++|+|+.+        .||+++.+. +++.||..+..
T Consensus       222 ~~~LiHGDl~~--------gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         222 AETLIHGDLHT--------GSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             CCEEECSCCCG--------GGEEECSSC-EEECCCTTCEE
T ss_pred             CcceeccCCcC--------CceeEcCCc-eEEechhhccc
Confidence            45799999999        999998764 89999987543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=87.63  E-value=0.13  Score=36.28  Aligned_cols=29  Identities=14%  Similarity=-0.025  Sum_probs=23.3

Q ss_pred             ccccccccchhhhhccccccceEEcCcceEEEccCCCCc
Q psy4332          22 KNGVEHSSLKKKCIKIFDFKNCLVGKKFEIKISDFATDS   60 (188)
Q Consensus        22 ~~~i~h~~lk~~~i~~~~~~nill~~~~~~kl~dfg~~~   60 (188)
                      ..+++|+|+.+        .||+++++  ..+.||+-+.
T Consensus       191 p~~liHgDlh~--------~NvL~~~~--~~~IDFdd~~  219 (325)
T d1zyla1         191 TVLRLHGDCHA--------GNILWRDG--PMFVDLDDAR  219 (325)
T ss_dssp             CCEECCSSCSG--------GGEEESSS--EEECCCTTCC
T ss_pred             CceeecCCCCc--------ccEEEeCC--ceEEechhcc
Confidence            46899999999        99998754  3578998764