Diaphorina citri psyllid: psy4339

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---

MRQKKILLKNLSLCSQLALKLKQVLFGSENLQVAIAEDELAYALYVNEYSSGRFTESRRHAEKAIQTFKNLLPENHLLLTSAHRVKALILEEIALDSNELISVQFYKEAELLHQNALVLSLKHFGENNVQTAKHYGNIGRLYQSMQKFDEAERMQLKAIAIKEKVLGKDDYEVGLSVGHLASLYNYHMLEYHKAEKLYFRSIEINDNLKLFSASYSGLEYHYRDLKLFSASYSGLEYDYRGLIHVYECLENFEKMTEFTNKLSEWKILRETNELNEPECHIDYAKPSEPLGETMAKYYALCSQ

ccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccHHccccHHHHHHHHHHHHHcc

*****ILLKNLSLCSQLALKLKQVLFGSENLQVAIAEDELAYALYVNEYSSGRFTESRRHAEKAIQTFKNLLPENHLLLTSAHRVKALILEEIALDSNELISVQFYKEAELLHQNALVLSLKHFGENNVQTAKHYGNIGRLYQSMQKFDEAERMQLKAIAIKEKVLGKDDYEVGLSVGHLASLYNYHMLEYHKAEKLYFRSIEINDNLKLFSASYSGLEYHYRDLKLFSASYSGLEYDYRGLIHVYECLENFEKMTEFTNKLSEWKILRETNELNEPECHIDYAKPSEPLGETMAKYYALCS*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Amyloid protein-binding protein 2	May play a role in intracellular protein transport. May be involved in the translocation of APP along microtubules toward the cell surface.	confident	Q9DAX9
Amyloid protein-binding protein 2	May play a role in intracellular protein transport. May be involved in the translocation of APP along microtubules toward the cell surface.	confident	A5HK05
Amyloid protein-binding protein 2	May play a role in intracellular protein transport. May be involved in the translocation of APP along microtubules toward the cell surface.	confident	Q92624

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0046907 [BP]	intracellular transport	probable	GO:0009987, GO:0006810, GO:0044763, GO:0051649, GO:0008150, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0030659 [CC]	cytoplasmic vesicle membrane	probable	GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0005575, GO:0031090, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0012505, GO:0012506, GO:0031982, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3EDT, chain B
Confidence level:very confident
Coverage over the Query: 6-87,98-262
View the alignment between query and template
View the model in PyMOL