Diaphorina citri psyllid: psy4510

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810--
MNSVHLNSCPALEASNDIVDNDSDEDMEQGEESKDKTKPDESKEEKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVHCIFVWLKYQLFVDVYYWAFVDLVYYIFPDLHYFF
cccccccccccccccccccccccccccccccccccccccccHHHHcccccccEEcccccccccccccccccccCECccccccccCEEEEECccccccccccccccEEEEEEcccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEccccccEEEEECccccEEEEcccccccccccccccccccccEEEEEEcccccEEEEEccccEEEEEcccccccccccccccEEECcccccEEEEEEccccccEEEEECccccEEEEccccccccCCcccccccccccEEEEEEccccccEEEEEEccccEEEEEccccccccccccccccccccEEEEEEcccccEEEEECccccEEEEEccccccccEEEEcccccccEEEEEEccccccEEEEECccccEEEEEccccccHHHHHHHHHHcccccEEEEEEcccccEEEEEECcccccEEEECcccccEEEECccccccEEEEEEcccccEEEEEECcccccEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccccEEECcccccEEEEEEECccccEEEEEEcccccEEEEEccccccccccccHHHHccccccccccccccccEEEccccccEEEEEEccccccEEEEECccccEEEEcccccccEEEEEEcccccEEEEECccccEEEEEcccccccCEcccccccccccEEEEEEccccccEEEEEEccccEEEEEcccccccEEEEEEEEEEEEEcccccccEEEEEcccEEEEEcccccccc
******************************************************LPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNL*******************************PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS*********KDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAE*NKKR*KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVHCIFVWLKYQLFVDVYYWAFVDLVYYIFPDLHYFF
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MNSVHLNSCPALEASNDIVDNDSDEDMEQGEESKDKTKPDESKEEKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKxxxxxxxxxxxxxxxxxxxxxPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISxxxxxxxxxxxxxxxxxxxxxGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVHCIFVWLKYQLFVDVYYWAFVDLVYYIFPDLHYFF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Glutamate-rich WD repeat-containing protein 1 confidentQ9BQ67
Glutamate-rich WD repeat-containing protein 1 confidentQ810D6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016740 [MF]transferase activityprobableGO:0003824, GO:0003674
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0016570 [BP]histone modificationprobableGO:0044699, GO:0044267, GO:0044260, GO:0006325, GO:0016043, GO:0071704, GO:0071840, GO:0009987, GO:0006464, GO:0043412, GO:0036211, GO:0044763, GO:0008152, GO:0006996, GO:0044238, GO:0051276, GO:0019538, GO:0044237, GO:0043170, GO:0008150, GO:0016568, GO:0016569
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0035097 [CC]histone methyltransferase complexprobableGO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0034708, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 174-624,648-766
View the alignment between query and template
View the model in PyMOL
Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 169-447,463-553,578-623,648-719
View the alignment between query and template
View the model in PyMOL
Template: 3MKQ, chain A
Confidence level:very confident
Coverage over the Query: 215-445,462-547,588-622,644-717,730-792
View the alignment between query and template
View the model in PyMOL
Template: 2XYI, chain A
Confidence level:very confident
Coverage over the Query: 60-131,163-444
View the alignment between query and template
View the model in PyMOL